Commits

Branch selector

 master

User selector

All users

Datepicker

All time

Commit History

Commits on Feb 17, 2024

• Replace "threading.Thread.isAlive" method

  Show description for 89c07a3
  aihgii

  committed
  89c07a3

  Copy full SHA for 89c07a3

Commits on Feb 12, 2024

• Add wheel, cython and setuptool explicitly as dependencies

  aihgii

  committed
  1fc480c

  Copy full SHA for 1fc480c

Commits on Feb 5, 2024

• Create Colab playground

  aihgii

  committed
  ee06f58

  Copy full SHA for ee06f58

Commits on Feb 4, 2024

• Update 'intervaltree' library dependency and fix incompatibilities introduced in release 3.0.0

  Show description for 2f74a04
  aihgii

  committed
  2f74a04

  Copy full SHA for 2f74a04

• Update dependencies with backward compatibility except for Python 3.7

  aihgii

  committed
  4eb1801

  Copy full SHA for 4eb1801

Commits on Mar 31, 2022

• release 0.11.0 (#716)

  lawrenae

  authored
  47844f7

  Copy full SHA for 47844f7

Commits on Mar 29, 2022

• Sample optimized tables (#715)

  Show description for fd3fd1f
  kbtian

  authored
  fd3fd1f

  Copy full SHA for fd3fd1f

Commits on Mar 25, 2022

• Chore/beam 2.36.0 (#714)

  Show description for 4090580
  

  lawrenae

  and

  aelawrence

  authored
  4090580

  Copy full SHA for 4090580

Commits on Mar 4, 2022

• Pipline mode flag (#713)

  Show description for 019fbac
  kbtian

  authored
  019fbac

  Copy full SHA for 019fbac

Commits on Feb 9, 2022

• dont just build the containers sequentially (#712)

  Show description for fc1d6eb
  

  lawrenae

  and

  aelawrence

  authored
  fc1d6eb

  Copy full SHA for fc1d6eb

Commits on Feb 8, 2022

• Update VEP runner to use Life Sciences API beta & VEP 104 (#698)

  Show description for 825eb80
  

  3 peopleauthored
  825eb80

  Copy full SHA for 825eb80

Commits on Jan 28, 2022

• Feature/custom worker service account (#711)

  Show description for 7164f4f
  

  lawrenae

  and

  aelawrence

  authored
  7164f4f

  Copy full SHA for 7164f4f

• Feature/custom dataflow container (#707)

  Show description for 37709f8
  

  lawrenae

  and

  aelawrence

  authored
  37709f8

  Copy full SHA for 37709f8

Commits on Jan 25, 2022

• removing travis CI usage in favor of Cloud Build (#708)

  Show description for 95824d1
  

  lawrenae

  and

  aelawrence

  authored
  95824d1

  Copy full SHA for 95824d1

• Fix yaml.load error (#709)

  Show description for 9678186
  kbtian

  authored
  9678186

  Copy full SHA for 9678186

Commits on Oct 8, 2021

• Update documentation for custom subnets (#702)

  moschetti

  authored
  7dabd01

  Copy full SHA for 7dabd01

Commits on Jun 21, 2021

• Add presentation and update links (#700)

  moschetti

  authored
  05da6cf

  Copy full SHA for 05da6cf

Commits on May 18, 2021

• update subnetwork flag documentation (#697)

  Show description for 2ce33db
  rcowin-gcp

  authored
  2ce33db

  Copy full SHA for 2ce33db

Commits on Oct 30, 2020

• Add an option to filter hom_ref_calls. (#692)

  tneymanov

  authored
  eb51fdd

  Copy full SHA for eb51fdd

Commits on Oct 23, 2020

• Add an option to supply custom_sample_info_table. (#693)

  Show description for 3c22920
  tneymanov

  authored
  3c22920

  Copy full SHA for 3c22920

Commits on Oct 20, 2020

• Use VEP version as docker image tags (#691)

  Show description for 5b22ee1
  samanvp

  authored
  5b22ee1

  Copy full SHA for 5b22ee1

Commits on Oct 19, 2020

• Change the default value of use_1_based_coordinate to False (#686)

  Show description for 2b7a5ce
  samanvp

  authored
  2b7a5ce

  Copy full SHA for 2b7a5ce

Commits on Oct 9, 2020

• Pass service account to the workers created for annotation (#687)

  Show description for 65fe5f8
  samanvp

  authored
  65fe5f8

  Copy full SHA for 65fe5f8

Commits on Oct 8, 2020

• Fix query 2.1 and update notebook name (#688)

  moschetti

  authored
  5074612

  Copy full SHA for 5074612

• Update query 2.3 (#685)

  Show description for feeaabb
  samanvp

  authored
  feeaabb

  Copy full SHA for feeaabb

• Add Query: Find mutation count across chromosome (#684)

  Show description for 04d31de
  tsa87

  authored
  04d31de

  Copy full SHA for 04d31de

Commits on Oct 7, 2020

• Update typos and narrative in gnomad query notebook. (#683)

  mbookman

  authored
  f9ba1e0

  Copy full SHA for f9ba1e0

Commits on Oct 5, 2020

• Add location flag to documentation (#682)

  Show description for c24fd61
  

  moschetti

  and

  samanvp

  authored
  c24fd61

  Copy full SHA for c24fd61

• Add link to sample queries from annotation docs (#680)

  Show description for 92197df
  

  moschetti

  and

  samanvp

  authored
  92197df

  Copy full SHA for 92197df

• Update gnomAD colab (#681)

  Show description for b24ab19
  samanvp

  authored
  b24ab19

  Copy full SHA for b24ab19

Commits on Oct 1, 2020

• Add gnomAD sample queries notebook (#678)

  Show description for 8664a75
  moschetti

  authored
  8664a75

  Copy full SHA for 8664a75

• Add an option to include call name in BQ table. (#677)

  tneymanov

  authored
  af54ee4

  Copy full SHA for af54ee4

Commits on Sep 30, 2020

• Add Life Sciences API --location flag (#648)

  Show description for 489722d
  samanvp

  authored
  489722d

  Copy full SHA for 489722d

• Set output-interval in pipelines_runner.sh to 60s. (#656)

  Show description for 8fdb226
  

  mbookman

  and

  samanvp

  authored
  8fdb226

  Copy full SHA for 8fdb226

• Reduce _LARGE_DATA_THRESHOLD to 500 (#663)

  Show description for d4240d7
  samanvp

  authored
  d4240d7

  Copy full SHA for d4240d7

Pagination

Previous

Next