From 413e1f60142e9a6b64f1c7d0d473fbc27f86d43f Mon Sep 17 00:00:00 2001
From: GlassOfWhiskey <iacopo.c92@gmail.com>
Date: Tue, 3 Dec 2024 21:55:25 +0100
Subject: [PATCH] Created cwltool codegen branch

---
 cwltool/extensions-v1.1.yml | 2 +-
 cwltool/extensions-v1.2.yml | 5 +++--
 cwltool/extensions.yml      | 2 +-
 3 files changed, 5 insertions(+), 4 deletions(-)

diff --git a/cwltool/extensions-v1.1.yml b/cwltool/extensions-v1.1.yml
index 0f53bea57..ad08da531 100644
--- a/cwltool/extensions-v1.1.yml
+++ b/cwltool/extensions-v1.1.yml
@@ -3,7 +3,7 @@ $namespaces:
   cwl: "https://w3id.org/cwl/cwl#"
   cwltool: "http://commonwl.org/cwltool#"
 $graph:
-- $import: https://w3id.org/cwl/CommonWorkflowLanguage.yml
+- $import: https://github.com/common-workflow-language/cwl-v1.1/raw/codegen/CommonWorkflowLanguage.yml
 
 - name: Secrets
   type: record
diff --git a/cwltool/extensions-v1.2.yml b/cwltool/extensions-v1.2.yml
index c39b15d07..a8aef784a 100644
--- a/cwltool/extensions-v1.2.yml
+++ b/cwltool/extensions-v1.2.yml
@@ -3,7 +3,7 @@ $namespaces:
   cwl: "https://w3id.org/cwl/cwl#"
   cwltool: "http://commonwl.org/cwltool#"
 $graph:
-- $import: https://w3id.org/cwl/CommonWorkflowLanguage.yml
+- $import: https://github.com/common-workflow-language/cwl-v1.2/raw/codegen/CommonWorkflowLanguage.yml
 
 - name: Secrets
   type: record
@@ -159,6 +159,7 @@ $graph:
         default must be applied prior to scattering or evaluating `valueFrom`.
       jsonldPredicate:
         _id: "sld:default"
+        _container: "@list"
         noLinkCheck: true
     valueFrom:
       type:
@@ -236,7 +237,7 @@ $graph:
         name: LoopOutputModes
         symbols: [ last, all ]
       default: last
-      doc:
+      doc: |
         - Specify the desired method of dealing with loop outputs
         - Default. Propagates only the last computed element to the subsequent steps when the loop terminates.
         - Propagates a single array with all output values to the subsequent steps when the loop terminates.
diff --git a/cwltool/extensions.yml b/cwltool/extensions.yml
index 4dca0ccd6..b855dd9e6 100644
--- a/cwltool/extensions.yml
+++ b/cwltool/extensions.yml
@@ -3,7 +3,7 @@ $namespaces:
   cwl: "https://w3id.org/cwl/cwl#"
   cwltool: "http://commonwl.org/cwltool#"
 $graph:
-- $import: https://w3id.org/cwl/CommonWorkflowLanguage.yml
+- $import: https://github.com/common-workflow-language/common-workflow-language/raw/codegen/v1.0/CommonWorkflowLanguage.yml
 
 - name: LoadListingRequirement
   type: record