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Description
In 07-downstream-analysis.ipynb, running the cell with from workflow_array_ephys.localization import coordinate_framework as ccf yields the following error.
Error stack
FileNotFoundError                         Traceback (most recent call last)
Cell In[4], line 1
----> 1 from workflow_array_ephys.localization import coordinate_framework as ccf
File [c:\Users\jaero\Desktop\workflow-array-ephys\workflow_array_ephys\localization.py:52](file:///C:/Users/jaero/Desktop/workflow-array-ephys/workflow_array_ephys/localization.py:52)
     45 electrode_localization.activate(
     46     db_prefix + "electrode_localization", db_prefix + "ccf", linking_module=__name__
     47 )
     49 nrrd_filepath = find_full_path(
     50     get_ephys_root_data_dir(), f"annotation_{voxel_resolution}.nrrd"
     51 )
---> 52 ontology_csv_filepath = find_full_path(get_ephys_root_data_dir(), "query.csv")
     54 if (
     55     not (coordinate_framework.CCF & {"ccf_id": ccf_id})
     56     and nrrd_filepath.exists()
     57     and ontology_csv_filepath.exists()
     58 ):
     59     coordinate_framework.load_ccf_annotation(
     60         ccf_id=ccf_id,
     61         version_name="ccf_2017",
   (...)
     64         ontology_csv_filepath=ontology_csv_filepath,
     65     )
...
     43     "No valid full-path found (from {})"
     44     " for {}".format(root_directories, relative_path)
     45 )
FileNotFoundError: No valid full-path found (from [WindowsPath('[C:/Users/jaero/Desktop/Data/workflow_array_ephys](file:///C:/Users/jaero/Desktop/Data/workflow_array_ephys)')]) for query.csv
Additional Research and Context
Add any additional research or context that was conducted in creating this report.
It expects query.csv, which is not present in the link provided (http://download.alleninstitute.org/informatics-archive/current-release/mouse_ccf/annotation/ccf_2017/)
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