Upgrade numpy scipy and various other dependencies.

Still unable to upgrade matplotlib to 1.3.1.

Author: Ram Mehta

3rdparty/site-packages/Cython-0.19.2.tar.gz

@@ -1,4 +1,4 @@
+ipython==1.1.0
 pygments==1.6
-pyzmq==2.2.0.1
-tornado==2.4.1
-ipython==0.13.1
+pyzmq==14.0.0
+tornado==3.1.1

3rdparty/site-packages/ipython-0.13.1.tar.gz

@@ -1,15 +1,19 @@
-cython==0.19.1
+cython==0.19.2
 flake8==2.0
-Imaging==1.1.7
-matplotlib==1.2.0
+imaging==1.1.7
+matplotlib==1.3.1
 mccabe==0.2
 method_decorator==0.1.3
 mpmath==0.17
 networkx==1.7
-nose==1.2.1
+nose==1.3.0
 pep8==1.4.5
+purehuff==0.2
 pyflakes==0.6.1
+pyparsing==2.0.1
 # pyside==1.1.2
-scikit-learn==0.13.1
-scipy==0.12.0
+python-dateutil==2.2
+scikit-learn==0.14.1
+scipy==0.13.1
+six==1.4.1
 sympy==0.7.2

3rdparty/site-packages/ipython-1.1.0.tar.gz

@@ -56,6 +56,15 @@ def module(ctx, module, configure="", numthreads=4, **kwargs):
     return ctx(rule=lambda target: ctx.venv_exec(srcscript), **kwargs)
 
 
+@conf
+def symlink_freetype(ctx, target):
+    includepath = os.path.join(ctx.out_dir, "include")
+    srcpath = "/usr/X11/include/freetype2/freetype"
+    dstpath = os.path.join(includepath, "freetype")
+    if not os.path.exists(dstpath):
+        os.symlink(srcpath, dstpath)
+
+
 @conf
 def build_freetype2(ctx, target):
     srcscript = ctx.module_builder("freetype-2.1.10")

3rdparty/site-packages/matplotlib-1.3.1.tar.gz

@@ -2,6 +2,7 @@
 # encoding: utf-8
 import os
 import platform
+import subprocess
 import sys
 
 
@@ -39,6 +40,7 @@ def build(ctx):
             readlinecmd = ctx.venv("easy_install --no-find-links %s && touch ${TGT}" % readlinetar)
             ctx(rule=readlinecmd, source="../bin/pkg-config", target="../.readline-done")
             platform_deps.append("../.readline-done")
+
     else:
         # We assume that a fortran compiler with lapack is installed.
         # It may be installed using:
@@ -58,9 +60,12 @@ def build(ctx):
     # Install numpy separately due to bug in scipy install script.
     site_packages = os.path.join("..", "lib", "python2.7", "site-packages")
     numpy = os.path.join(site_packages, "numpy", "__init__.py")
-    ctx(rule=ctx.venv("pip install numpy==1.6.2 --no-index -f file://%s" % pkg),
+    ctx(rule=ctx.venv("pip install numpy==1.8.0 --no-index -f file://%s" % pkg),
         source=platform_deps, target=numpy)
 
+    # pycuda = os.path.join(site_packages, "pycuda", "__init__.py")
+    # ctx.module("pycuda-2013.1.1", source=numpy, target="../lib/libzmq.a")
+
     # Install cvxopt separately due to misplaced setup.py file.
     cvxopt = os.path.join(site_packages, "cvxopt", "__init__.py")
     ctx(rule=ctx.build_cvxopt, source=numpy, target=cvxopt)
@@ -87,4 +92,3 @@ def build(ctx):
         ],
         target="../.requirements-done")
     ctx.add_manual_dependency("../.requirements-done", ctx.path.find_node("requirements.txt"))
-    ctx(rule="touch ${TGT}", source="../.requirements-done", target="../../.build-done")