From c4075fa51a636cdc9d1f34034e05d13f85053e95 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Tue, 31 Jan 2023 14:28:56 -0800 Subject: [PATCH 01/88] Added ability to import multiple jsonschema files organized in a project. (#113) * Added ability to import multiple jsonschema files organized in a project. Added tests for HCA * add missing * removed emacs stray files * use camelcase * skip beautiful soup test on windows * restore windows test with help from @dalito --- poetry.lock | 394 +++++++++++-- pyproject.toml | 2 + schema_automator/cli.py | 74 ++- schema_automator/importers/import_engine.py | 2 + .../importers/jsonschema_import_engine.py | 160 ++++- .../importers/tabular_import_engine.py | 55 ++ schema_automator/utils/schemautils.py | 7 +- tests/resources/BioMRLs-table.html | 438 ++++++++++++++ tests/resources/hca/README.md | 83 +++ .../core/biomaterial/biomaterial_core.json | 88 +++ tests/resources/hca/core/file/file_core.json | 75 +++ .../hca/core/process/process_core.json | 56 ++ .../hca/core/project/project_core.json | 46 ++ .../hca/core/protocol/protocol_core.json | 59 ++ .../module/biomaterial/cell_morphology.json | 71 +++ .../hca/module/biomaterial/death.json | 93 +++ .../biomaterial/familial_relationship.json | 39 ++ .../module/biomaterial/growth_conditions.json | 109 ++++ .../module/biomaterial/human_specific.json | 38 ++ .../module/biomaterial/medical_history.json | 65 +++ .../module/biomaterial/mouse_specific.json | 29 + .../biomaterial/preservation_storage.json | 71 +++ .../module/biomaterial/state_of_specimen.json | 92 +++ .../hca/module/biomaterial/timecourse.json | 45 ++ .../biological_macromolecule_ontology.json | 49 ++ .../module/ontology/cell_cycle_ontology.json | 49 ++ .../module/ontology/cell_type_ontology.json | 49 ++ .../ontology/cellular_component_ontology.json | 49 ++ .../ontology/contributor_role_ontology.json | 49 ++ .../ontology/development_stage_ontology.json | 49 ++ .../hca/module/ontology/disease_ontology.json | 49 ++ .../module/ontology/enrichment_ontology.json | 49 ++ .../module/ontology/ethnicity_ontology.json | 49 ++ .../ontology/file_content_ontology.json | 49 ++ .../module/ontology/file_format_ontology.json | 49 ++ .../module/ontology/instrument_ontology.json | 49 ++ .../module/ontology/length_unit_ontology.json | 49 ++ .../library_amplification_ontology.json | 49 ++ .../library_construction_ontology.json | 49 ++ .../module/ontology/mass_unit_ontology.json | 49 ++ .../module/ontology/microscopy_ontology.json | 49 ++ .../hca/module/ontology/organ_ontology.json | 49 ++ .../module/ontology/organ_part_ontology.json | 49 ++ .../ontology/process_type_ontology.json | 49 ++ .../ontology/protocol_type_ontology.json | 48 ++ .../module/ontology/sequencing_ontology.json | 49 ++ .../hca/module/ontology/species_ontology.json | 49 ++ .../hca/module/ontology/strain_ontology.json | 49 ++ .../ontology/target_pathway_ontology.json | 49 ++ .../module/ontology/time_unit_ontology.json | 49 ++ .../ontology/treatment_method_ontology.json | 49 ++ .../module/process/purchased_reagents.json | 59 ++ .../hca/module/process/sequencing/S10x.json | 45 ++ .../module/process/sequencing/barcode.json | 64 ++ .../process/sequencing/insdc_experiment.json | 32 + .../sequencing/plate_based_sequencing.json | 50 ++ .../resources/hca/module/project/contact.json | 90 +++ .../resources/hca/module/project/funder.json | 45 ++ .../hca/module/project/publication.json | 67 +++ .../hca/module/protocol/channel.json | 70 +++ .../resources/hca/module/protocol/matrix.json | 67 +++ .../resources/hca/module/protocol/probe.json | 99 ++++ tests/resources/hca/property_migrations.json | 548 ++++++++++++++++++ .../resources/hca/system/file_descriptor.json | 99 ++++ tests/resources/hca/system/license.json | 39 ++ tests/resources/hca/system/links.json | 270 +++++++++ tests/resources/hca/system/provenance.json | 74 +++ .../hca/type/biomaterial/cell_line.json | 166 ++++++ .../hca/type/biomaterial/cell_suspension.json | 94 +++ .../hca/type/biomaterial/donor_organism.json | 189 ++++++ .../hca/type/biomaterial/imaged_specimen.json | 70 +++ .../hca/type/biomaterial/organoid.json | 119 ++++ .../biomaterial/specimen_from_organism.json | 111 ++++ .../hca/type/file/analysis_file.json | 53 ++ tests/resources/hca/type/file/image_file.json | 44 ++ .../hca/type/file/reference_file.json | 92 +++ .../hca/type/file/sequence_file.json | 91 +++ .../hca/type/file/supplementary_file.json | 51 ++ .../process/analysis/analysis_process.json | 220 +++++++ tests/resources/hca/type/process/process.json | 106 ++++ tests/resources/hca/type/project/project.json | 161 +++++ .../protocol/analysis/analysis_protocol.json | 63 ++ .../aggregate_generation_protocol.json | 57 ++ .../collection_protocol.json | 60 ++ .../differentiation_protocol.json | 98 ++++ .../dissociation_protocol.json | 60 ++ .../enrichment_protocol.json | 74 +++ .../ipsc_induction_protocol.json | 107 ++++ .../treatment_protocol.json | 77 +++ .../imaging/imaging_preparation_protocol.json | 126 ++++ .../protocol/imaging/imaging_protocol.json | 145 +++++ .../resources/hca/type/protocol/protocol.json | 51 ++ .../library_preparation_protocol.json | 179 ++++++ .../sequencing/sequencing_protocol.json | 78 +++ tests/resources/hca/update_log.csv | 1 + tests/resources/hca/versions.json | 139 +++++ .../test_jsonschema_importer.py | 34 +- tests/test_importers/test_tabular_importer.py | 39 ++ 98 files changed, 8110 insertions(+), 76 deletions(-) create mode 100644 schema_automator/importers/tabular_import_engine.py create mode 100644 tests/resources/BioMRLs-table.html create mode 100644 tests/resources/hca/README.md create mode 100644 tests/resources/hca/core/biomaterial/biomaterial_core.json create mode 100644 tests/resources/hca/core/file/file_core.json create mode 100644 tests/resources/hca/core/process/process_core.json create mode 100644 tests/resources/hca/core/project/project_core.json create mode 100644 tests/resources/hca/core/protocol/protocol_core.json create mode 100644 tests/resources/hca/module/biomaterial/cell_morphology.json create mode 100644 tests/resources/hca/module/biomaterial/death.json create mode 100644 tests/resources/hca/module/biomaterial/familial_relationship.json create mode 100644 tests/resources/hca/module/biomaterial/growth_conditions.json create mode 100644 tests/resources/hca/module/biomaterial/human_specific.json create mode 100644 tests/resources/hca/module/biomaterial/medical_history.json create mode 100644 tests/resources/hca/module/biomaterial/mouse_specific.json create mode 100644 tests/resources/hca/module/biomaterial/preservation_storage.json create mode 100644 tests/resources/hca/module/biomaterial/state_of_specimen.json create mode 100644 tests/resources/hca/module/biomaterial/timecourse.json create mode 100644 tests/resources/hca/module/ontology/biological_macromolecule_ontology.json create mode 100644 tests/resources/hca/module/ontology/cell_cycle_ontology.json create mode 100644 tests/resources/hca/module/ontology/cell_type_ontology.json create mode 100644 tests/resources/hca/module/ontology/cellular_component_ontology.json create mode 100644 tests/resources/hca/module/ontology/contributor_role_ontology.json create mode 100644 tests/resources/hca/module/ontology/development_stage_ontology.json create mode 100644 tests/resources/hca/module/ontology/disease_ontology.json create mode 100644 tests/resources/hca/module/ontology/enrichment_ontology.json create mode 100644 tests/resources/hca/module/ontology/ethnicity_ontology.json create mode 100644 tests/resources/hca/module/ontology/file_content_ontology.json create mode 100644 tests/resources/hca/module/ontology/file_format_ontology.json create mode 100644 tests/resources/hca/module/ontology/instrument_ontology.json create mode 100644 tests/resources/hca/module/ontology/length_unit_ontology.json create mode 100644 tests/resources/hca/module/ontology/library_amplification_ontology.json create mode 100644 tests/resources/hca/module/ontology/library_construction_ontology.json create mode 100644 tests/resources/hca/module/ontology/mass_unit_ontology.json create mode 100644 tests/resources/hca/module/ontology/microscopy_ontology.json create mode 100644 tests/resources/hca/module/ontology/organ_ontology.json create mode 100644 tests/resources/hca/module/ontology/organ_part_ontology.json create mode 100644 tests/resources/hca/module/ontology/process_type_ontology.json create mode 100644 tests/resources/hca/module/ontology/protocol_type_ontology.json create mode 100644 tests/resources/hca/module/ontology/sequencing_ontology.json create mode 100644 tests/resources/hca/module/ontology/species_ontology.json create mode 100644 tests/resources/hca/module/ontology/strain_ontology.json create mode 100644 tests/resources/hca/module/ontology/target_pathway_ontology.json create mode 100644 tests/resources/hca/module/ontology/time_unit_ontology.json create mode 100644 tests/resources/hca/module/ontology/treatment_method_ontology.json create mode 100644 tests/resources/hca/module/process/purchased_reagents.json create mode 100644 tests/resources/hca/module/process/sequencing/S10x.json create mode 100644 tests/resources/hca/module/process/sequencing/barcode.json create mode 100644 tests/resources/hca/module/process/sequencing/insdc_experiment.json create mode 100644 tests/resources/hca/module/process/sequencing/plate_based_sequencing.json create mode 100644 tests/resources/hca/module/project/contact.json create mode 100644 tests/resources/hca/module/project/funder.json create mode 100644 tests/resources/hca/module/project/publication.json create mode 100644 tests/resources/hca/module/protocol/channel.json create mode 100644 tests/resources/hca/module/protocol/matrix.json create mode 100644 tests/resources/hca/module/protocol/probe.json create mode 100644 tests/resources/hca/property_migrations.json create mode 100644 tests/resources/hca/system/file_descriptor.json create mode 100644 tests/resources/hca/system/license.json create mode 100644 tests/resources/hca/system/links.json create mode 100644 tests/resources/hca/system/provenance.json create mode 100644 tests/resources/hca/type/biomaterial/cell_line.json create mode 100644 tests/resources/hca/type/biomaterial/cell_suspension.json create mode 100644 tests/resources/hca/type/biomaterial/donor_organism.json create mode 100644 tests/resources/hca/type/biomaterial/imaged_specimen.json create mode 100644 tests/resources/hca/type/biomaterial/organoid.json create mode 100644 tests/resources/hca/type/biomaterial/specimen_from_organism.json create mode 100644 tests/resources/hca/type/file/analysis_file.json create mode 100644 tests/resources/hca/type/file/image_file.json create mode 100644 tests/resources/hca/type/file/reference_file.json create mode 100644 tests/resources/hca/type/file/sequence_file.json create mode 100644 tests/resources/hca/type/file/supplementary_file.json create mode 100644 tests/resources/hca/type/process/analysis/analysis_process.json create mode 100644 tests/resources/hca/type/process/process.json create mode 100644 tests/resources/hca/type/project/project.json create mode 100644 tests/resources/hca/type/protocol/analysis/analysis_protocol.json create mode 100644 tests/resources/hca/type/protocol/biomaterial_collection/aggregate_generation_protocol.json create mode 100644 tests/resources/hca/type/protocol/biomaterial_collection/collection_protocol.json create mode 100644 tests/resources/hca/type/protocol/biomaterial_collection/differentiation_protocol.json create mode 100644 tests/resources/hca/type/protocol/biomaterial_collection/dissociation_protocol.json create mode 100644 tests/resources/hca/type/protocol/biomaterial_collection/enrichment_protocol.json create mode 100644 tests/resources/hca/type/protocol/biomaterial_collection/ipsc_induction_protocol.json create mode 100644 tests/resources/hca/type/protocol/biomaterial_collection/treatment_protocol.json create mode 100644 tests/resources/hca/type/protocol/imaging/imaging_preparation_protocol.json create mode 100644 tests/resources/hca/type/protocol/imaging/imaging_protocol.json create mode 100644 tests/resources/hca/type/protocol/protocol.json create mode 100644 tests/resources/hca/type/protocol/sequencing/library_preparation_protocol.json create mode 100644 tests/resources/hca/type/protocol/sequencing/sequencing_protocol.json create mode 100644 tests/resources/hca/update_log.csv create mode 100644 tests/resources/hca/versions.json create mode 100644 tests/test_importers/test_tabular_importer.py diff --git a/poetry.lock b/poetry.lock index a49bf78..5c528cf 100644 --- a/poetry.lock +++ b/poetry.lock @@ -187,7 +187,7 @@ python-versions = "*" name = "beautifulsoup4" version = "4.11.1" description = "Screen-scraping library" -category = "dev" +category = "main" optional = false python-versions = ">=3.6.0" @@ -241,6 +241,14 @@ webencodings = "*" css = ["tinycss2 (>=1.1.0,<1.2)"] dev = ["build (==0.8.0)", "flake8 (==4.0.1)", "hashin (==0.17.0)", "pip-tools (==6.6.2)", "pytest (==7.1.2)", "Sphinx (==4.3.2)", "tox (==3.25.0)", "twine (==4.0.1)", "wheel (==0.37.1)", "black (==22.3.0)", "mypy (==0.961)"] +[[package]] +name = "cachetools" +version = "5.2.1" +description = "Extensible memoizing collections and decorators" +category = "main" +optional = false +python-versions = "~=3.7" + [[package]] name = "certifi" version = "2022.9.24" @@ -351,10 +359,18 @@ pytrie = "*" requests = "*" [package.extras] -tests = ["coverage", "pytest"] -pandas = ["pandas"] -docs = ["sphinx-automodapi", "sphinx-autodoc-typehints", "sphinx-rtd-theme", "sphinx"] bioregistry = ["bioregistry (>=0.5.136)"] +docs = ["sphinx", "sphinx-rtd-theme", "sphinx-autodoc-typehints", "sphinx-automodapi"] +pandas = ["pandas"] +tests = ["pytest", "coverage"] + +[[package]] +name = "daff" +version = "1.3.46" +description = "Diff and patch tables" +category = "main" +optional = false +python-versions = "*" [[package]] name = "debugpy" @@ -576,7 +592,115 @@ python-versions = "*" python-dateutil = ">=2.8.1" [package.extras] -dev = ["wheel", "flake8", "markdown", "twine"] +dev = ["twine", "markdown", "flake8", "wheel"] + +[[package]] +name = "google" +version = "3.0.0" +description = "Python bindings to the Google search engine." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +beautifulsoup4 = "*" + +[[package]] +name = "google-api-core" +version = "2.11.0" +description = "Google API client core library" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +google-auth = ">=2.14.1,<3.0dev" +googleapis-common-protos = ">=1.56.2,<2.0dev" +protobuf = ">=3.19.5,<3.20.0 || >3.20.0,<3.20.1 || >3.20.1,<4.21.0 || >4.21.0,<4.21.1 || >4.21.1,<4.21.2 || >4.21.2,<4.21.3 || >4.21.3,<4.21.4 || >4.21.4,<4.21.5 || >4.21.5,<5.0.0dev" +requests = ">=2.18.0,<3.0.0dev" + +[package.extras] +grpc = ["grpcio (>=1.33.2,<2.0dev)", "grpcio-status (>=1.33.2,<2.0dev)", "grpcio (>=1.49.1,<2.0dev)", "grpcio-status (>=1.49.1,<2.0dev)"] +grpcgcp = ["grpcio-gcp (>=0.2.2,<1.0dev)"] +grpcio-gcp = ["grpcio-gcp (>=0.2.2,<1.0dev)"] + +[[package]] +name = "google-api-python-client" +version = "2.72.0" +description = "Google API Client Library for Python" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +google-api-core = ">=1.31.5,<2.0.0 || >2.3.0,<3.0.0dev" +google-auth = ">=1.19.0,<3.0.0dev" +google-auth-httplib2 = ">=0.1.0" +httplib2 = ">=0.15.0,<1dev" +uritemplate = ">=3.0.1,<5" + +[[package]] +name = "google-auth" +version = "2.16.0" +description = "Google Authentication Library" +category = "main" +optional = false +python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*" + +[package.dependencies] +cachetools = ">=2.0.0,<6.0" +pyasn1-modules = ">=0.2.1" +rsa = {version = ">=3.1.4,<5", markers = "python_version >= \"3.6\""} +six = ">=1.9.0" + +[package.extras] +aiohttp = ["requests (>=2.20.0,<3.0.0dev)", "aiohttp (>=3.6.2,<4.0.0dev)"] +enterprise_cert = ["cryptography (==36.0.2)", "pyopenssl (==22.0.0)"] +pyopenssl = ["pyopenssl (>=20.0.0)", "cryptography (>=38.0.3)"] +reauth = ["pyu2f (>=0.1.5)"] +requests = ["requests (>=2.20.0,<3.0.0dev)"] + +[[package]] +name = "google-auth-httplib2" +version = "0.1.0" +description = "Google Authentication Library: httplib2 transport" +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +google-auth = "*" +httplib2 = ">=0.15.0" +six = "*" + +[[package]] +name = "google-auth-oauthlib" +version = "0.8.0" +description = "Google Authentication Library" +category = "main" +optional = false +python-versions = ">=3.6" + +[package.dependencies] +google-auth = ">=2.15.0" +requests-oauthlib = ">=0.7.0" + +[package.extras] +tool = ["click (>=6.0.0)"] + +[[package]] +name = "googleapis-common-protos" +version = "1.58.0" +description = "Common protobufs used in Google APIs" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +protobuf = ">=3.19.5,<3.20.0 || >3.20.0,<3.20.1 || >3.20.1,<4.21.1 || >4.21.1,<4.21.2 || >4.21.2,<4.21.3 || >4.21.3,<4.21.4 || >4.21.4,<4.21.5 || >4.21.5,<5.0.0dev" + +[package.extras] +grpc = ["grpcio (>=1.44.0,<2.0.0dev)"] [[package]] name = "graphviz" @@ -603,6 +727,29 @@ python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*" docs = ["sphinx", "docutils (<0.18)"] test = ["objgraph", "psutil", "faulthandler"] +[[package]] +name = "gspread" +version = "5.7.2" +description = "Google Spreadsheets Python API" +category = "main" +optional = false +python-versions = ">=3.6, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" + +[package.dependencies] +google-auth = ">=1.12.0" +google-auth-oauthlib = ">=0.4.1" + +[[package]] +name = "gspread-formatting" +version = "1.1.2" +description = "Complete Google Sheets formatting support for gspread worksheets" +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +gspread = ">=3.0.0" + [[package]] name = "hbreader" version = "0.9.1" @@ -611,6 +758,17 @@ category = "main" optional = false python-versions = ">=3.7" +[[package]] +name = "httplib2" +version = "0.21.0" +description = "A comprehensive HTTP client library." +category = "main" +optional = false +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" + +[package.dependencies] +pyparsing = {version = ">=2.4.2,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.0.2 || >3.0.2,<3.0.3 || >3.0.3,<4", markers = "python_version > \"3.0\""} + [[package]] name = "idna" version = "3.4" @@ -1164,14 +1322,14 @@ python-versions = ">=3.7" mdurl = ">=0.1,<1.0" [package.extras] -testing = ["pytest-regressions", "pytest-cov", "pytest", "coverage"] -rtd = ["sphinx-book-theme", "sphinx-design", "sphinx-copybutton", "sphinx", "pyyaml", "myst-parser", "attrs"] -profiling = ["gprof2dot"] -plugins = ["mdit-py-plugins"] -linkify = ["linkify-it-py (>=1.0,<2.0)"] -compare = ["panflute (>=2.1.3,<2.2.0)", "mistune (>=2.0.2,<2.1.0)", "mistletoe (>=0.8.1,<0.9.0)", "markdown (>=3.3.6,<3.4.0)", "commonmark (>=0.9.1,<0.10.0)"] +benchmarking = ["psutil", "pytest", "pytest-benchmark (>=3.2,<4.0)"] code_style = ["pre-commit (==2.6)"] -benchmarking = ["pytest-benchmark (>=3.2,<4.0)", "pytest", "psutil"] +compare = ["commonmark (>=0.9.1,<0.10.0)", "markdown (>=3.3.6,<3.4.0)", "mistletoe (>=0.8.1,<0.9.0)", "mistune (>=2.0.2,<2.1.0)", "panflute (>=2.1.3,<2.2.0)"] +linkify = ["linkify-it-py (>=1.0,<2.0)"] +plugins = ["mdit-py-plugins"] +profiling = ["gprof2dot"] +rtd = ["attrs", "myst-parser", "pyyaml", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinx-book-theme"] +testing = ["coverage", "pytest", "pytest-cov", "pytest-regressions"] [[package]] name = "markupsafe" @@ -1204,9 +1362,9 @@ python-versions = ">=3.7" markdown-it-py = ">=1.0.0,<3.0.0" [package.extras] -testing = ["pytest-regressions", "pytest-cov", "pytest", "coverage"] -rtd = ["sphinx-book-theme (>=0.1.0,<0.2.0)", "myst-parser (>=0.16.1,<0.17.0)", "attrs"] code_style = ["pre-commit"] +rtd = ["attrs", "myst-parser (>=0.16.1,<0.17.0)", "sphinx-book-theme (>=0.1.0,<0.2.0)"] +testing = ["coverage", "pytest", "pytest-cov", "pytest-regressions"] [[package]] name = "mdurl" @@ -1354,8 +1512,8 @@ nest-asyncio = "*" traitlets = ">=5.2.2" [package.extras] -test = ["xmltodict", "twine (>=1.11.0)", "testpath", "setuptools (>=60.0)", "pytest-cov (>=2.6.1)", "pytest-asyncio", "pytest (>=4.1)", "pre-commit", "pip (>=18.1)", "nbconvert", "mypy", "ipywidgets", "ipython", "ipykernel", "flake8", "check-manifest", "black"] -sphinx = ["sphinx-book-theme", "Sphinx (>=1.7)", "myst-parser", "moto", "mock", "autodoc-traits"] +sphinx = ["autodoc-traits", "mock", "moto", "myst-parser", "Sphinx (>=1.7)", "sphinx-book-theme"] +test = ["black", "check-manifest", "flake8", "ipykernel", "ipython", "ipywidgets", "mypy", "nbconvert", "pip (>=18.1)", "pre-commit", "pytest (>=4.1)", "pytest-asyncio", "pytest-cov (>=2.6.1)", "setuptools (>=60.0)", "testpath", "twine (>=1.11.0)", "xmltodict"] [[package]] name = "nbconvert" @@ -1510,8 +1668,8 @@ networkx = ">=2" pronto = ">=2.4.0" [package.extras] +dev = ["fire", "pandas", "pre-commit", "pytest"] viz = ["pygraphviz"] -dev = ["pytest", "pre-commit", "pandas", "fire"] [[package]] name = "oaklib" @@ -1549,6 +1707,19 @@ sssom-schema = ">=0.9.3,<0.10.0" [package.extras] gilda = ["gilda (>=0.10.1,<0.11.0)"] +[[package]] +name = "oauthlib" +version = "3.2.2" +description = "A generic, spec-compliant, thorough implementation of the OAuth request-signing logic" +category = "main" +optional = false +python-versions = ">=3.6" + +[package.extras] +rsa = ["cryptography (>=3.0.0)"] +signals = ["blinker (>=1.4.0)"] +signedtoken = ["cryptography (>=3.0.0)", "pyjwt (>=2.0.0,<3)"] + [[package]] name = "ols-client" version = "0.1.2" @@ -1565,8 +1736,26 @@ pystow = "*" requests = "*" [package.extras] -tests = ["coverage", "pytest"] -docs = ["sphinx-automodapi", "sphinx-autodoc-typehints", "sphinx-click", "sphinx-rtd-theme", "sphinx"] +docs = ["sphinx", "sphinx-rtd-theme", "sphinx-click", "sphinx-autodoc-typehints", "sphinx-automodapi"] +tests = ["pytest", "coverage"] + +[[package]] +name = "ontodev-cogs" +version = "0.3.3" +description = "COGS Operates Google Sheets" +category = "main" +optional = false +python-versions = ">=3.6, <4" + +[package.dependencies] +daff = "*" +google = "*" +google-api-python-client = "*" +gspread = "*" +gspread-formatting = "*" +requests = "*" +tabulate = "*" +termcolor = "*" [[package]] name = "ontoportal-client" @@ -1581,8 +1770,8 @@ pystow = "*" typing-extensions = "*" [package.extras] -tests = ["unittest-templates", "coverage", "pytest"] -docs = ["sphinx-automodapi", "sphinx-autodoc-typehints", "sphinx-rtd-theme", "sphinx"] +docs = ["sphinx", "sphinx-rtd-theme", "sphinx-autodoc-typehints", "sphinx-automodapi"] +tests = ["pytest", "coverage", "unittest-templates"] [[package]] name = "openpyxl" @@ -1616,14 +1805,14 @@ python-versions = ">=3.8" [package.dependencies] numpy = [ - {version = ">=1.21.0", markers = "python_version >= \"3.10\""}, {version = ">=1.20.3", markers = "python_version < \"3.10\""}, + {version = ">=1.21.0", markers = "python_version >= \"3.10\""}, ] python-dateutil = ">=2.8.1" pytz = ">=2020.1" [package.extras] -test = ["pytest-xdist (>=1.31)", "pytest (>=6.0)", "hypothesis (>=5.5.3)"] +test = ["hypothesis (>=5.5.3)", "pytest (>=6.0)", "pytest-xdist (>=1.31)"] [[package]] name = "pandasql" @@ -1737,8 +1926,8 @@ optional = false python-versions = ">=3.6" [package.extras] -testing = ["pytest-benchmark", "pytest"] -dev = ["tox", "pre-commit"] +dev = ["pre-commit", "tox"] +testing = ["pytest", "pytest-benchmark"] [[package]] name = "ply" @@ -1810,6 +1999,14 @@ fastobo = ">=0.12.1,<0.13.0" networkx = ">=2.3,<3.0" python-dateutil = ">=2.8,<3.0" +[[package]] +name = "protobuf" +version = "4.21.12" +description = "" +category = "main" +optional = false +python-versions = ">=3.7" + [[package]] name = "psutil" version = "5.9.4" @@ -1867,6 +2064,25 @@ python-versions = ">=3.7" [package.dependencies] numpy = ">=1.16.6" +[[package]] +name = "pyasn1" +version = "0.4.8" +description = "ASN.1 types and codecs" +category = "main" +optional = false +python-versions = "*" + +[[package]] +name = "pyasn1-modules" +version = "0.2.8" +description = "A collection of ASN.1-based protocols modules." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +pyasn1 = ">=0.4.6,<0.5.0" + [[package]] name = "pycparser" version = "2.21" @@ -2213,6 +2429,21 @@ urllib3 = ">=1.21.1,<1.27" socks = ["PySocks (>=1.5.6,!=1.5.7)"] use_chardet_on_py3 = ["chardet (>=3.0.2,<6)"] +[[package]] +name = "requests-oauthlib" +version = "1.3.1" +description = "OAuthlib authentication support for Requests." +category = "main" +optional = false +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" + +[package.dependencies] +oauthlib = ">=3.0.0" +requests = ">=2.0.0" + +[package.extras] +rsa = ["oauthlib[signedtoken] (>=3.0.0)"] + [[package]] name = "rfc3339-validator" version = "0.1.4" @@ -2232,6 +2463,17 @@ category = "main" optional = false python-versions = "*" +[[package]] +name = "rsa" +version = "4.9" +description = "Pure-Python RSA implementation" +category = "main" +optional = false +python-versions = ">=3.6,<4" + +[package.dependencies] +pyasn1 = ">=0.1.3" + [[package]] name = "ruamel.yaml" version = "0.17.21" @@ -2255,6 +2497,20 @@ category = "main" optional = false python-versions = ">=3.5" +[[package]] +name = "schemasheets" +version = "0.1.17" +description = "Package to author schemas using spreadsheets" +category = "main" +optional = false +python-versions = ">=3.9,<4.0" + +[package.dependencies] +bioregistry = ">=0.5,<0.6" +Jinja2 = ">=3.0.3,<4.0.0" +linkml = ">=1.3,<1.4" +ontodev-cogs = ">=0.3.3,<0.4.0" + [[package]] name = "scipy" version = "1.9.3" @@ -2344,7 +2600,7 @@ python-versions = "*" name = "soupsieve" version = "2.3.2.post1" description = "A modern CSS selector implementation for Beautiful Soup." -category = "dev" +category = "main" optional = false python-versions = ">=3.6" @@ -2373,10 +2629,10 @@ python-versions = ">=3.7" rdflib = ">=6.1.1" [package.extras] -pandas = ["pandas (>=1.3.5)"] +dev = ["setuptools (>=3.7.1)", "mypy (>=0.931)", "pandas (>=1.3.5)", "pandas-stubs (>=1.2.0.48)"] +docs = ["sphinx (<5)", "sphinx-rtd-theme"] keepalive = ["keepalive (>=0.5)"] -docs = ["sphinx-rtd-theme", "sphinx (<5)"] -dev = ["pandas-stubs (>=1.2.0.48)", "pandas (>=1.3.5)", "mypy (>=0.931)", "setuptools (>=3.7.1)"] +pandas = ["pandas (>=1.3.5)"] [[package]] name = "sphinx" @@ -2455,8 +2711,8 @@ optional = false python-versions = ">=3.5" [package.extras] +lint = ["flake8", "mypy", "docutils-stubs"] test = ["pytest"] -lint = ["docutils-stubs", "mypy", "flake8"] [[package]] name = "sphinxcontrib-devhelp" @@ -2467,8 +2723,8 @@ optional = false python-versions = ">=3.5" [package.extras] +lint = ["flake8", "mypy", "docutils-stubs"] test = ["pytest"] -lint = ["docutils-stubs", "mypy", "flake8"] [[package]] name = "sphinxcontrib-htmlhelp" @@ -2479,8 +2735,8 @@ optional = false python-versions = ">=3.6" [package.extras] -test = ["html5lib", "pytest"] -lint = ["docutils-stubs", "mypy", "flake8"] +lint = ["flake8", "mypy", "docutils-stubs"] +test = ["pytest", "html5lib"] [[package]] name = "sphinxcontrib-jsmath" @@ -2491,7 +2747,7 @@ optional = false python-versions = ">=3.5" [package.extras] -test = ["mypy", "flake8", "pytest"] +test = ["pytest", "flake8", "mypy"] [[package]] name = "sphinxcontrib-mermaid" @@ -2510,8 +2766,8 @@ optional = false python-versions = ">=3.5" [package.extras] +lint = ["flake8", "mypy", "docutils-stubs"] test = ["pytest"] -lint = ["docutils-stubs", "mypy", "flake8"] [[package]] name = "sphinxcontrib-serializinghtml" @@ -2649,6 +2905,28 @@ category = "main" optional = false python-versions = "*" +[[package]] +name = "tabulate" +version = "0.9.0" +description = "Pretty-print tabular data" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.extras] +widechars = ["wcwidth"] + +[[package]] +name = "termcolor" +version = "2.2.0" +description = "ANSI color formatting for output in terminal" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.extras] +tests = ["pytest", "pytest-cov"] + [[package]] name = "terminado" version = "0.17.0" @@ -2678,8 +2956,8 @@ python-versions = ">=3.7" webencodings = ">=0.4" [package.extras] -test = ["flake8", "isort", "pytest"] -doc = ["sphinx-rtd-theme", "sphinx"] +doc = ["sphinx", "sphinx-rtd-theme"] +test = ["pytest", "isort", "flake8"] [[package]] name = "tomli" @@ -2787,6 +3065,14 @@ python-versions = ">=3.6" [package.extras] dev = ["mypy", "flake8 (<4.0.0)", "flake8-annotations", "flake8-bugbear", "flake8-commas", "flake8-comprehensions", "flake8-continuation", "flake8-datetimez", "flake8-docstrings", "flake8-import-order", "flake8-literal", "flake8-noqa", "flake8-requirements", "flake8-type-annotations", "flake8-use-fstring", "pep8-naming"] +[[package]] +name = "uritemplate" +version = "4.1.1" +description = "Implementation of RFC 6570 URI Templates" +category = "main" +optional = false +python-versions = ">=3.6" + [[package]] name = "urllib3" version = "1.26.12" @@ -2895,6 +3181,14 @@ category = "main" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7" +[[package]] +name = "xmltodict" +version = "0.13.0" +description = "Makes working with XML feel like you are working with JSON" +category = "main" +optional = false +python-versions = ">=3.4" + [[package]] name = "yarl" version = "1.8.1" @@ -2926,7 +3220,7 @@ mariadb = [] [metadata] lock-version = "1.1" python-versions = "^3.9" -content-hash = "0ccf9b90a2063125515a2400b79f34541f5dd6fa09a5ed9d4b5d50150b8a2b49" +content-hash = "cea3055d882759ee2516f9afdca0c576959ed7cafe4ed123d24d79f94d0289a5" [metadata.files] aiohttp = [] @@ -2948,6 +3242,7 @@ bcp47 = [] beautifulsoup4 = [] bioregistry = [] bleach = [] +cachetools = [] certifi = [] cffi = [] cfgraph = [] @@ -2958,6 +3253,7 @@ click = [] click-log = [] colorama = [] curies = [] +daff = [] debugpy = [] decorator = [] defusedxml = [] @@ -2978,9 +3274,19 @@ frozenlist = [] fsspec = [] funowl = [] ghp-import = [] +google = [] +google-api-core = [] +google-api-python-client = [] +google-auth = [] +google-auth-httplib2 = [] +google-auth-oauthlib = [] +googleapis-common-protos = [] graphviz = [] greenlet = [] +gspread = [] +gspread-formatting = [] hbreader = [] +httplib2 = [] idna = [] imagesize = [] importlib-metadata = [] @@ -3040,7 +3346,9 @@ num2words = [] numpy = [] nxontology = [] oaklib = [] +oauthlib = [] ols-client = [] +ontodev-cogs = [] ontoportal-client = [] openpyxl = [] packaging = [] @@ -3060,12 +3368,15 @@ prefixmaps = [] prometheus-client = [] prompt-toolkit = [] pronto = [] +protobuf = [] psutil = [] psycopg2-binary = [] ptyprocess = [] pure-eval = [] py = [] pyarrow = [] +pyasn1 = [] +pyasn1-modules = [] pycparser = [] pydantic = [] pygments = [] @@ -3093,10 +3404,13 @@ rdflib = [] rdflib-jsonld = [] rdflib-shim = [] requests = [] +requests-oauthlib = [] rfc3339-validator = [] rfc3987 = [] +rsa = [] "ruamel.yaml" = [] "ruamel.yaml.clib" = [] +schemasheets = [] scipy = [] semsql = [] send2trash = [] @@ -3125,6 +3439,8 @@ sssom = [] sssom-schema = [] stack-data = [] strsimpy = [] +tabulate = [] +termcolor = [] terminado = [] tinycss2 = [] tomli = [] @@ -3136,6 +3452,7 @@ traitlets = [] typing-extensions = [] typing-inspect = [] uri-template = [] +uritemplate = [] urllib3 = [] validators = [] virtualenv = [] @@ -3146,5 +3463,6 @@ webencodings = [] websocket-client = [] widgetsnbextension = [] wrapt = [] +xmltodict = [] yarl = [] zipp = [] diff --git a/pyproject.toml b/pyproject.toml index 8df806c..917a15d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -28,6 +28,8 @@ oaklib = "^0.1.52" pandera = "^0.12.0" tomlkit = "^0.11.4" inflect = "^6.0.0" +schemasheets = "^0.1.17" +xmltodict = "^0.13.0" [tool.poetry.dev-dependencies] diff --git a/schema_automator/cli.py b/schema_automator/cli.py index 427a917..858d4f8 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -24,6 +24,7 @@ from schema_automator.importers.owl_import_engine import OwlImportEngine from schema_automator.generalizers.rdf_data_generalizer import RdfDataGeneralizer from schema_automator.importers.sql_import_engine import SqlImportEngine +from schema_automator.importers.tabular_import_engine import TableImportEngine from schema_automator.utils.schemautils import minify_schema, write_schema input_option = click.option( @@ -34,7 +35,7 @@ output_option = click.option( "-o", "--output", - help="path to output file." + help="path to output file or directory." ) schema_name_option = click.option( '--schema-name', @@ -46,7 +47,10 @@ '--annotator', '-A', help='name of annotator to use for auto-annotating results. Must be an OAK selector') - +use_attributes_option = click.option( + "--use-attributes/--no-use-attributes", + help="If true, use attributes over slots/slot_usage" +) @click.group() @click.option("-v", "--verbose", @@ -166,19 +170,16 @@ def generalize_htmltable(url, output, class_name, schema_name, pandera: bool, """ Generalizes from a table parsed from a URL - Uses pandas/beautiful soup + Uses pandas/beautiful soup. + + Note: if the website cannot be accessed directly, you can download the HTML + and pass in an argument of the form file:///absolute/path/to/file.html """ dfs = pd.read_html(url) logging.info(f"{url} has {len(dfs)} tables") df = dfs[table_number] - if data_output: - df.to_csv(data_output, sep="\t") - if pandera: - ie = PandasDataGeneralizer(**kwargs) - schema = ie.convert(df, class_name=class_name, schema_name=schema_name) - else: - ie = CsvDataGeneralizer(**kwargs) - schema = ie.convert_dicts(df.to_dict('records')) + importer = TableImportEngine(**kwargs) + schema = importer.import_from_dataframe(df) write_schema(schema, output) @@ -219,6 +220,38 @@ def import_sql(db, output, **args): write_schema(schema, output) +@main.command() +@output_option +@schema_name_option +@click.option('--class-name', '-c', default=DEFAULT_CLASS_NAME, help='Core class name in schema') +@click.option('--data-output', help='Path to file of downloaded data') +@click.option('--element-type', help='E.g. class, enum') +@click.option('--parent', help='parent ID') +@click.option('--columns', + required=True, + help='comma-separated schemasheets descriptors of each column. Must be in same order') +@click.option('--table-number', + type=int, + default=0, + show_default=True, + help='If URL has multiple tables, use this one (zero-based)') +@click.argument('url') # input TSV (must have column headers +def import_htmltable(url, output, class_name, schema_name, columns, + table_number: int, data_output, + **kwargs): + """ + Generalizes from a table parsed from a URL + + Uses pandas/beautiful soup + """ + dfs = pd.read_html(url) + logging.info(f"{url} has {len(dfs)} tables") + df = dfs[table_number] + ie = TableImportEngine(columns=columns.split(","), **kwargs) + schema = ie.import_from_dataframe(df) + write_schema(schema, output) + + @main.command() @click.argument('input') @output_option @@ -281,8 +314,11 @@ def generalize_toml(input, output, schema_name, omit_null, **kwargs): @click.argument('input') @output_option @schema_name_option +@use_attributes_option +@click.option("--import-project/--no-import-project", + help="If true, then the input path should be a directory with multiple schema files") @click.option('--format', '-f', default='json', help='JSON Schema format - yaml or json') -def import_json_schema(input, output, schema_name, format, **args): +def import_json_schema(input, output, import_project: bool, schema_name, format, **kwargs): """ Imports from JSON Schema to LinkML @@ -292,9 +328,17 @@ def import_json_schema(input, output, schema_name, format, **args): schemauto import-json-schema my/schema/personinfo.schema.json """ - loader = JsonSchemaImportEngine() - schema = loader.load(input, name=schema_name, format=format) - write_schema(schema, output) + ie = JsonSchemaImportEngine(**kwargs) + if not import_project: + schema = ie.convert(input, name=schema_name, format=format) + write_schema(schema, output) + else: + if output is None: + raise ValueError(f"You must pass an export directory with --output") + ie.import_project(input, output, name=schema_name, format=format) + + + @main.command() diff --git a/schema_automator/importers/import_engine.py b/schema_automator/importers/import_engine.py index b807899..e644ca8 100644 --- a/schema_automator/importers/import_engine.py +++ b/schema_automator/importers/import_engine.py @@ -1,8 +1,10 @@ from abc import ABC +from dataclasses import dataclass from linkml_runtime.linkml_model import SchemaDefinition, Prefix +@dataclass class ImportEngine(ABC): """ Abstract Base Class for all Import Engines. diff --git a/schema_automator/importers/jsonschema_import_engine.py b/schema_automator/importers/jsonschema_import_engine.py index 3110927..d43141c 100644 --- a/schema_automator/importers/jsonschema_import_engine.py +++ b/schema_automator/importers/jsonschema_import_engine.py @@ -1,4 +1,6 @@ import json +from dataclasses import dataclass +from pathlib import Path import click import yaml @@ -6,11 +8,14 @@ from copy import copy from typing import Any, Tuple, Dict, Union, List, Optional +from deprecation import deprecated +from linkml.utils.schema_builder import SchemaBuilder from linkml_runtime.linkml_model import SchemaDefinition, Element, ClassDefinition, \ SlotDefinition, EnumDefinition, \ ClassDefinitionName, \ SlotDefinitionName, Prefix -from linkml_runtime.utils.formatutils import underscore +from linkml_runtime.linkml_model.meta import ReachabilityQuery, AnonymousEnumExpression +from linkml_runtime.utils.formatutils import underscore, camelcase from schema_automator.importers.import_engine import ImportEngine from schema_automator.utils.schemautils import minify_schema, write_schema @@ -18,12 +23,14 @@ # TODO: move to core. https://github.com/linkml/linkml/issues/104 RESERVED = ['in', 'not', 'def'] +@dataclass class JsonSchemaImportEngine(ImportEngine): """ A :ref:`ImportEngine` that imports a JSON-Schema representation to a LinkML Schema """ + use_attributes: bool = False - def convert(self, input: str, name=None, format = 'json', **kwargs): + def convert(self, input: str, name=None, format = 'json', **kwargs) -> SchemaDefinition: """ Converts a JSON-Schema json file into a LinkML schema @@ -41,7 +48,64 @@ def convert(self, input: str, name=None, format = 'json', **kwargs): obj = yaml.safe_load(stream) else: raise Exception(f'Bad format: {format}') - return self.loads(obj, name, **kwargs) + return self.loads(obj, name, input_path=input, **kwargs) + + def import_project(self, import_directory: str, export_directory: str, match_suffix=".json", name=None, **kwargs) -> str: + path = Path(import_directory) + export_path = Path(export_directory) + imports_list = [] + importer_name = "main.yaml" + if name is None: + name = "imported" + path_to_schema_map = {} + class_name_to_module_map = {} + for item in path.rglob("*"): + if str(item).endswith(match_suffix): + relpath = item.relative_to(path) + module_name = str(relpath.with_suffix("")) + module_name_safe = "-".join(relpath.with_suffix("").parts) + logging.info(f"Converting {item} => {module_name_safe}") + schema = self.convert(str(item), name=module_name_safe, **kwargs) + output_path = export_path / relpath + output_path = output_path.with_suffix(".yaml") + output_path.parent.mkdir(parents=True, exist_ok=True) + path_to_schema_map[output_path] = schema + if str(output_path) == importer_name: + raise ValueError(f"Must choose new importer_name: {output_path}") + imports_list.append(module_name) + for cn in schema.classes: + if cn in class_name_to_module_map: + raise ValueError(f"Class name clash; {cn} is in {module_name} and {class_name_to_module_map[cn]}") + class_name_to_module_map[cn] = module_name + # add imports based on ranges + for this_module, schema in path_to_schema_map.items(): + relpath = this_module.relative_to(export_path) + logging.debug(f"Relative path {relpath} for module at: {this_module}") + depth = len(relpath.parts) - 1 + rel = "../" * depth + for cls in schema.classes.values(): + for a in cls.attributes.values(): + rng = a.range + if rng not in class_name_to_module_map: + continue + if rng in schema.classes: + # no need to self-import + continue + import_module_name = class_name_to_module_map[rng] + if import_module_name not in schema.imports: + logging.info(f"Adding import to {import_module_name} in {schema.name} for {rng}") + schema.imports.append(import_module_name) + for output_path, schema in path_to_schema_map.items(): + write_schema(schema, output_path) + sb = SchemaBuilder(name=name) + sb.add_defaults() + s = sb.schema + for i in imports_list: + s.imports.append(i) + importer_path = export_path / importer_name + write_schema(s, importer_path) + return str(importer_path) + def load(self, input: str, name=None, format = 'json', **kwargs): return self.convert(input, name=name, format=format, **kwargs) @@ -49,6 +113,10 @@ def load(self, input: str, name=None, format = 'json', **kwargs): def loads(self, obj: Any, name=None, **kwargs) -> SchemaDefinition: return self.translate_schema(obj, name, **kwargs) + def _class_name(self, cn: str) -> str: + # in future this can be configurable + return camelcase(cn) + def get_id(self, obj) -> str: if 'id' in obj: id = obj['id'] @@ -56,7 +124,10 @@ def get_id(self, obj) -> str: id = obj['$ref'] else: raise Exception(f'No id {obj}') - return self.split_name(id)[0] + if id.startswith("#/definitions/"): + return self.split_name(id)[0] + else: + return self._class_name(Path(str(id)).stem) def split_name(self, name) -> Tuple[str, str]: name = name.replace('#/definitions/', '') @@ -68,13 +139,15 @@ def split_name(self, name) -> Tuple[str, str]: return name, pkg - def translate_schema(self, obj: Dict, id_val=None, name=None, root_class_name=None) -> SchemaDefinition: + def translate_schema(self, obj: Dict, id_val=None, name=None, root_class_name=None, input_path: str = None) -> SchemaDefinition: if id_val is None and '$id' in obj: id_val = obj['$id'] if id_val is None and '$schema' in obj: id_val = obj['$schema'] if name is None and 'title' in obj: name = obj['title'].replace(' ','-') + if name[0].isnumeric(): + name = f"_{name}" jsonschema_version = obj.get('$schema', None) if id_val is None and name is None: raise Exception(f'Must pass name OR id, or these must be present in the jsonschema') @@ -88,9 +161,17 @@ def translate_schema(self, obj: Dict, id_val=None, name=None, root_class_name=No self.translate_definitions(obj.get('$defs', {})) else: self.translate_definitions(obj.get('definitions', {})) + if root_class_name is None: + root_class_name = obj.get('name', None) if root_class_name is None: root_class_name = obj.get('title', None) + if root_class_name is None and input_path: + root_class_name = Path(input_path).stem + if root_class_name is None: + raise ValueError(f'No root class name: {obj}') + root_class_name = self._class_name(root_class_name) if 'properties' in obj: + logging.info(f'Root class: {root_class_name}') root_class = ClassDefinition(root_class_name) self.translate_properties(obj, root_class) self.schema.classes[root_class_name] = root_class @@ -121,7 +202,7 @@ def translate_array(self, obj: Dict, name: str) -> SlotDefinition: slot.multivalued = True return slot elif 'properties' in obj: - c = ClassDefinition(f'{name}Class') + c = ClassDefinition(f'{self._class_name(name)}Class') self.translate_properties(obj, c) self.schema.classes[c.name] = c slot = SlotDefinition(name) @@ -133,20 +214,19 @@ def translate_array(self, obj: Dict, name: str) -> SlotDefinition: return None def translate_ref(self, obj: dict) -> ClassDefinitionName: - return ClassDefinitionName(self.get_id(obj)) + return ClassDefinitionName(self._class_name(self.get_id(obj))) def translate_oneOf(self, oneOfList: List) -> Optional[ClassDefinition]: if all('$ref' in x for x in oneOfList): cns = [self.translate_ref(x) for x in oneOfList] - n = '_'.join(cns) + n = self._class_name('_'.join(cns)) c = ClassDefinition(n, union_of=cns) return c else: logging.warning(f'Cannot yet handle oneOfs without refs: {oneOfList}') return None - def translate_property(self, obj: Dict, name: str) -> SlotDefinition: - #print(f'Translating property {name}: {obj}') + def translate_property(self, obj: Dict, name: str, class_name: str = None) -> SlotDefinition: if name is None: raise ValueError(f'Name not set for {obj}') schema = self.schema @@ -159,6 +239,8 @@ def translate_property(self, obj: Dict, name: str) -> SlotDefinition: s.description = obj.get('description', None) if s.description is not None: s.description = s.description.strip() + # HCA-specific + s.title = obj.get("user_friendly", None) default = obj.get('default', None) if '$ref' in obj: s.range = self.translate_ref(obj) @@ -179,16 +261,50 @@ def translate_property(self, obj: Dict, name: str) -> SlotDefinition: elif t == 'string': if 'enum' in obj: pvs = obj['enum'] - ename = f'{name}_options' + if self.use_attributes and class_name: + ename = f'{class_name}_{name}_options' + else: + ename = f'{name}_options' schema.enums[ename] = EnumDefinition(name=ename, permissible_values=pvs) s.range = ename + self._enum_from_ontology_extension(s, obj, name, class_name=class_name) else: logging.error(f'Cannot translate type {t} in {obj}') if s.name is schema.slots: logging.warning(f'TODO: unify alternate slots') - schema.slots[s.name] = s + if not self.use_attributes: + schema.slots[s.name] = s return s + def _enum_from_ontology_extension(self, slot: SlotDefinition, js_obj: dict, name: str, class_name: str = None): + gr = js_obj.get("graph_restriction", None) + if not gr: + return + if self.use_attributes and class_name: + ename = f'{class_name}_{name}_options' + else: + ename = f'{name}_options' + rqs = [] + for ont in gr["ontologies"]: + rq = ReachabilityQuery(source_ontology=ont, + source_nodes=gr.get("classes", []), + include_self=gr.get("include_self", False), + is_direct=gr.get("direct", False), + relationship_types=gr.get("relations", []), + ) + rqs.append(rq) + + if len(rqs) == 0: + logging.warning(f"No ontologies in {gr}") + return + elif len(rqs) == 1: + edef = EnumDefinition(ename, reachable_from = rqs[0]) + else: + includes = [AnonymousEnumExpression(reachable_from=rq) for rq in rqs] + edef = EnumDefinition(ename, include=includes) + self.schema.enums[ename] = edef + slot.range = ename + def translate_object(self, obj: Dict, name: str = None) -> ClassDefinitionName: """ Translates jsonschema obj of type object @@ -218,17 +334,20 @@ def translate_object(self, obj: Dict, name: str = None) -> ClassDefinitionName: raise ValueError(f'Problem splitting name from package') if name is None: name = 'TODO' + name = self._class_name(name) c = ClassDefinition(name, description=desc, from_schema=pkg) if unionCls: c.union_of = unionCls.union_of for k, v in properties.items(): # TODO: reuse below - #print(f' PROP {k} = {v}') - slot = self.translate_property(v, k) + slot = self.translate_property(v, k, class_name=name) if slot.name in required: slot.required = True - c.slots.append(slot.name) - c.slot_usage[slot.name] = slot + if self.use_attributes: + c.attributes[slot.name] = slot + else: + c.slots.append(slot.name) + c.slot_usage[slot.name] = slot schema.classes[c.name] = c return c.name @@ -236,11 +355,14 @@ def translate_object(self, obj: Dict, name: str = None) -> ClassDefinitionName: def translate_properties(self, obj: dict, parent_class: ClassDefinition): required = obj.get('required', []) for k, v in obj.get('properties',{}).items(): - slot = self.translate_property(v, k) + slot = self.translate_property(v, k, class_name=parent_class.name) if slot.name in required: slot.required = True - parent_class.slots.append(slot.name) - parent_class.slot_usage[slot.name] = slot + if self.use_attributes: + parent_class.attributes[slot.name] = slot + else: + parent_class.slots.append(slot.name) + parent_class.slot_usage[slot.name] = slot @click.command() diff --git a/schema_automator/importers/tabular_import_engine.py b/schema_automator/importers/tabular_import_engine.py new file mode 100644 index 0000000..9ab9e9f --- /dev/null +++ b/schema_automator/importers/tabular_import_engine.py @@ -0,0 +1,55 @@ +import logging + +from dataclasses import dataclass +from tempfile import NamedTemporaryFile +from typing import List + +from linkml_runtime.linkml_model.meta import SchemaDefinition +from schemasheets.schemamaker import SchemaMaker + +from schema_automator.importers.import_engine import ImportEngine +import pandas as pd + + +@dataclass +class TableImportEngine(ImportEngine): + """ + An ImportEngine that imports tabular data via schemasheets + + """ + element_type: str = None + parent: str = None + columns: List[str] = None + + def convert(self, file: str) -> SchemaDefinition: + """ + Converts one or more JSON files into a Schema + + :param files: + :param kwargs: + :return: + """ + df = pd.read_csv(file, sep='\t') + self.import_from_dataframe(df) + + def import_from_dataframe(self, df: pd.DataFrame): + """ + Imports a dataframe into a schema + + :param df: + :return: + """ + tf = NamedTemporaryFile(delete=False) + ix = 1 + line = pd.DataFrame(dict(zip(df.head(), self.columns)), index=[ix]) + df = pd.concat([df.iloc[:ix-1], line, df.iloc[ix-1:]]).reset_index(drop=True) + if self.parent: + df.insert(0, + column="parent", + value=[f">{self.element_type}"] + [self.parent] * (len(df) - 1)) + #print(df) + df.to_csv(tf.name, sep='\t', index=False) + #print(open(tf.name, 'r').read()) + #element_map = dict(zip(df.head(), self.columns)) + sm = SchemaMaker() + return sm.create_schema([tf.name]) diff --git a/schema_automator/utils/schemautils.py b/schema_automator/utils/schemautils.py index 12d018d..7b01ca1 100644 --- a/schema_automator/utils/schemautils.py +++ b/schema_automator/utils/schemautils.py @@ -1,5 +1,6 @@ import copy import logging +from pathlib import Path from typing import Union, Optional from deprecated.classic import deprecated @@ -10,7 +11,7 @@ from linkml_runtime.utils.schema_as_dict import schema_as_dict -def write_schema(schema: Union[dict, SchemaDefinition], output: Optional[str] = None): +def write_schema(schema: Union[dict, SchemaDefinition], output: Optional[Union[Path, str]] = None): """ Convenience method for writing a schema to stdout or to a file @@ -24,7 +25,7 @@ def write_schema(schema: Union[dict, SchemaDefinition], output: Optional[str] = sdict = schema ys = yaml.safe_dump(sdict, sort_keys=False) if output: - with open(output, 'w', encoding='UTF-8') as stream: + with open(str(output), 'w', encoding='UTF-8') as stream: stream.write(ys) else: print(ys) @@ -78,4 +79,4 @@ def merge_schemas(schemas, nomerge_enums_for=[]): schema['enums'][n] = x else: None # TODO - return schema \ No newline at end of file + return schema diff --git a/tests/resources/BioMRLs-table.html b/tests/resources/BioMRLs-table.html new file mode 100644 index 0000000..fa5f8ee --- /dev/null +++ b/tests/resources/BioMRLs-table.html @@ -0,0 +1,438 @@ + + + + Bioindustrial manufacturing readiness levels (BioMRLs) as a shared framework for measuring and communicating the maturity of bioproduct manufacturing processes | Oxford Academic + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
+ + + + + + + + + + + + + + + + + + + Skip to Main Content + + + + + + + +
+
Table 2.

Bioindustrial Manufacturing Readiness Levels (BioMRLs)

BioMRLSummary description of BioMRL1-10
BioMRL1:Basic manufacturing implications identified Prior to physical research and development efforts, a study of manufacturing capacity is performed. Criteria include identification and investigation of global trends in the industrial base, manufacturing science, material availability, supply chain, and metrology. 
BioMRL2:Manufacturing concepts identified Key manufacturing concepts have been identified, including broad-based studies that address analysis of material and process approaches, material effects and availability, potential supply chains, needed workforce skillsets, potential future investments, etc. Manufacturing scale and quality requirements for potential markets are identified and analyzed. An understanding of manufacturing feasibility and risk is emerging. 
BioMRL3:Manufacturing subsystems or components Components of the biomanufacturing process have been proven in a laboratory environment. This includes genetic engineering efforts needed to create strains capable of producing the desired products in titers that support the transition to pilot-scale production (typically in excess of 1 g/L). Methods for the purification and analysis of the product of interest are also required but can rely on lab-scale equipment that is not suitable for larger-scale DSP. 
BioMRL4: Independent validation and verification of proof-of-concept The proof-of-concept system has been demonstrated in a strain suitable for commercial-scale manufacturing and has been independently reproduced/validated/verified. Additionally, an initial assessment of the manufacturability is complete, including preliminary techno-economic analysis (TEA) and life-cycle analysis (LCA). This assessment should include plans for the scale-up production (SUP) and downstream processing (DSP) needed to produce sufficient quantities to allow testing and evaluation by downstream stakeholders. These plans incorporate production-relevant environments. Product quality risks and mitigation plans are documented. 
BioMRL5: Demonstration of prototype unit operations in a production relevant environment Identification of enabling/critical unit operations is complete. Prototype materials, tooling, and test equipment, as well as personnel skills, have been demonstrated empirically for unit operations in a production-relevant environment. Scale-up production and downstream processing have been performed at suitable scales to deliver sufficient quantities of end-product to downstream stakeholders for testing and evaluation. The TEA has been further refined to assess projected manufacturing costs. A risk management plan to mitigate technical and economic risks is integrated with the manufacturing strategy. 
BioMRL6: Demonstration of a prototype system or subsystem in a production relevant environment Manufacturing processes have been selected for the end-to-end manufacturing pipeline, even if engineering and/or design variables still need to be optimized. Prototype manufacturing processes and technologies, materials, tooling, and test equipment, as well as personnel skills, have been demonstrated on systems and/or subsystems in a production-relevant environment. The TEA is refined based on system performance and is expanded to include inventory control, production scheduling, plant maintenance, and production quality attributes (PQAs). Long-lead and key supply chain elements have been identified, and supply chain risk mitigation strategies exist. 
BioMRL7: Demonstration of systems or subsystems in a production representative environment Detailed system design is complete. Manufacturing processes and procedures have been demonstrated in a production representative environment. Sufficient quantities of product have been made to test packaging and distribution systems. Unit cost reduction strategies, such as statistical process controls (SPCs), are underway in a production representative environment. Quality assurance of supply chains is in place, and procurement schedules for long-lead elements are established. The manufacturing process is sufficient to support low-level commercial manufacturing. 
BioMRL8:Manufacturing line demonstrated, ready for low-rate initial production (LRIP) This maturity level is associated with manufacturing readiness for entry into LRIP. The detailed system design is complete and sufficiently stable to enter LRIP. All materials, manpower, tooling, test equipment, and facilities are proven on the manufacturing line and are available to meet the planned low-rate production schedule. STE/SIE has been validated in accordance with plans. Manufacturing and quality processes and procedures have been proven and are ready for LRIP. Known technical and business risks pose no significant challenges for LRIP. The cost model and yield and rate analyses have been updated with manufacturing line results. Supplier qualification testing and first article inspections have been completed. The industrial base has been assessed and shows that industrial capability is established to support LRIP. 
BioMRL9:Low rate production demonstrated; Capability in place to begin full rate production (FRP) Manufacturing has successfully achieved LRIP and is ready to enter FRP. All systems engineering/design requirements have been met such that there are minimal system changes. Major system design features are stable and have been proven in operational tests and evaluations. Materials, parts, manpower, tooling, test equipment, and facilities are available to meet planned rate production schedules. STE/SIE validation is maintained and re-validated as necessary. Manufacturing process capability is at an appropriate quality level to meet customer tolerances. LRIP cost targets have been met. The cost model has been updated for FRP and reflects the impact of continuous improvement. 
BioMRL10:FRP demonstrated and lean production practices in place Engineering/design changes are few and generally limited to continuous improvement changes or obsolescence issues. System, components, and items are in FRP and meet all engineering, performance, quality, and reliability requirements. Manufacturing process capability is at the appropriate quality level. All materials, tooling, inspection and test equipment, facilities, and manpower are in place and have met FRP requirements. Process infrastructure and analytical equipment validation are maintained and re-validated as necessary. Rate production unit costs meet goals, and funding is sufficient for production at the required rates. Continuous process improvements based on risks identified during FRP are ongoing. 
BioMRLSummary description of BioMRL1-10
BioMRL1:Basic manufacturing implications identified Prior to physical research and development efforts, a study of manufacturing capacity is performed. Criteria include identification and investigation of global trends in the industrial base, manufacturing science, material availability, supply chain, and metrology. 
BioMRL2:Manufacturing concepts identified Key manufacturing concepts have been identified, including broad-based studies that address analysis of material and process approaches, material effects and availability, potential supply chains, needed workforce skillsets, potential future investments, etc. Manufacturing scale and quality requirements for potential markets are identified and analyzed. An understanding of manufacturing feasibility and risk is emerging. 
BioMRL3:Manufacturing subsystems or components Components of the biomanufacturing process have been proven in a laboratory environment. This includes genetic engineering efforts needed to create strains capable of producing the desired products in titers that support the transition to pilot-scale production (typically in excess of 1 g/L). Methods for the purification and analysis of the product of interest are also required but can rely on lab-scale equipment that is not suitable for larger-scale DSP. 
BioMRL4: Independent validation and verification of proof-of-concept The proof-of-concept system has been demonstrated in a strain suitable for commercial-scale manufacturing and has been independently reproduced/validated/verified. Additionally, an initial assessment of the manufacturability is complete, including preliminary techno-economic analysis (TEA) and life-cycle analysis (LCA). This assessment should include plans for the scale-up production (SUP) and downstream processing (DSP) needed to produce sufficient quantities to allow testing and evaluation by downstream stakeholders. These plans incorporate production-relevant environments. Product quality risks and mitigation plans are documented. 
BioMRL5: Demonstration of prototype unit operations in a production relevant environment Identification of enabling/critical unit operations is complete. Prototype materials, tooling, and test equipment, as well as personnel skills, have been demonstrated empirically for unit operations in a production-relevant environment. Scale-up production and downstream processing have been performed at suitable scales to deliver sufficient quantities of end-product to downstream stakeholders for testing and evaluation. The TEA has been further refined to assess projected manufacturing costs. A risk management plan to mitigate technical and economic risks is integrated with the manufacturing strategy. 
BioMRL6: Demonstration of a prototype system or subsystem in a production relevant environment Manufacturing processes have been selected for the end-to-end manufacturing pipeline, even if engineering and/or design variables still need to be optimized. Prototype manufacturing processes and technologies, materials, tooling, and test equipment, as well as personnel skills, have been demonstrated on systems and/or subsystems in a production-relevant environment. The TEA is refined based on system performance and is expanded to include inventory control, production scheduling, plant maintenance, and production quality attributes (PQAs). Long-lead and key supply chain elements have been identified, and supply chain risk mitigation strategies exist. 
BioMRL7: Demonstration of systems or subsystems in a production representative environment Detailed system design is complete. Manufacturing processes and procedures have been demonstrated in a production representative environment. Sufficient quantities of product have been made to test packaging and distribution systems. Unit cost reduction strategies, such as statistical process controls (SPCs), are underway in a production representative environment. Quality assurance of supply chains is in place, and procurement schedules for long-lead elements are established. The manufacturing process is sufficient to support low-level commercial manufacturing. 
BioMRL8:Manufacturing line demonstrated, ready for low-rate initial production (LRIP) This maturity level is associated with manufacturing readiness for entry into LRIP. The detailed system design is complete and sufficiently stable to enter LRIP. All materials, manpower, tooling, test equipment, and facilities are proven on the manufacturing line and are available to meet the planned low-rate production schedule. STE/SIE has been validated in accordance with plans. Manufacturing and quality processes and procedures have been proven and are ready for LRIP. Known technical and business risks pose no significant challenges for LRIP. The cost model and yield and rate analyses have been updated with manufacturing line results. Supplier qualification testing and first article inspections have been completed. The industrial base has been assessed and shows that industrial capability is established to support LRIP. 
BioMRL9:Low rate production demonstrated; Capability in place to begin full rate production (FRP) Manufacturing has successfully achieved LRIP and is ready to enter FRP. All systems engineering/design requirements have been met such that there are minimal system changes. Major system design features are stable and have been proven in operational tests and evaluations. Materials, parts, manpower, tooling, test equipment, and facilities are available to meet planned rate production schedules. STE/SIE validation is maintained and re-validated as necessary. Manufacturing process capability is at an appropriate quality level to meet customer tolerances. LRIP cost targets have been met. The cost model has been updated for FRP and reflects the impact of continuous improvement. 
BioMRL10:FRP demonstrated and lean production practices in place Engineering/design changes are few and generally limited to continuous improvement changes or obsolescence issues. System, components, and items are in FRP and meet all engineering, performance, quality, and reliability requirements. Manufacturing process capability is at the appropriate quality level. All materials, tooling, inspection and test equipment, facilities, and manpower are in place and have met FRP requirements. Process infrastructure and analytical equipment validation are maintained and re-validated as necessary. Rate production unit costs meet goals, and funding is sufficient for production at the required rates. Continuous process improvements based on risks identified during FRP are ongoing. 
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Table 2.

Bioindustrial Manufacturing Readiness Levels (BioMRLs)

BioMRLSummary description of BioMRL1-10
BioMRL1:Basic manufacturing implications identified Prior to physical research and development efforts, a study of manufacturing capacity is performed. Criteria include identification and investigation of global trends in the industrial base, manufacturing science, material availability, supply chain, and metrology. 
BioMRL2:Manufacturing concepts identified Key manufacturing concepts have been identified, including broad-based studies that address analysis of material and process approaches, material effects and availability, potential supply chains, needed workforce skillsets, potential future investments, etc. Manufacturing scale and quality requirements for potential markets are identified and analyzed. An understanding of manufacturing feasibility and risk is emerging. 
BioMRL3:Manufacturing subsystems or components Components of the biomanufacturing process have been proven in a laboratory environment. This includes genetic engineering efforts needed to create strains capable of producing the desired products in titers that support the transition to pilot-scale production (typically in excess of 1 g/L). Methods for the purification and analysis of the product of interest are also required but can rely on lab-scale equipment that is not suitable for larger-scale DSP. 
BioMRL4: Independent validation and verification of proof-of-concept The proof-of-concept system has been demonstrated in a strain suitable for commercial-scale manufacturing and has been independently reproduced/validated/verified. Additionally, an initial assessment of the manufacturability is complete, including preliminary techno-economic analysis (TEA) and life-cycle analysis (LCA). This assessment should include plans for the scale-up production (SUP) and downstream processing (DSP) needed to produce sufficient quantities to allow testing and evaluation by downstream stakeholders. These plans incorporate production-relevant environments. Product quality risks and mitigation plans are documented. 
BioMRL5: Demonstration of prototype unit operations in a production relevant environment Identification of enabling/critical unit operations is complete. Prototype materials, tooling, and test equipment, as well as personnel skills, have been demonstrated empirically for unit operations in a production-relevant environment. Scale-up production and downstream processing have been performed at suitable scales to deliver sufficient quantities of end-product to downstream stakeholders for testing and evaluation. The TEA has been further refined to assess projected manufacturing costs. A risk management plan to mitigate technical and economic risks is integrated with the manufacturing strategy. 
BioMRL6: Demonstration of a prototype system or subsystem in a production relevant environment Manufacturing processes have been selected for the end-to-end manufacturing pipeline, even if engineering and/or design variables still need to be optimized. Prototype manufacturing processes and technologies, materials, tooling, and test equipment, as well as personnel skills, have been demonstrated on systems and/or subsystems in a production-relevant environment. The TEA is refined based on system performance and is expanded to include inventory control, production scheduling, plant maintenance, and production quality attributes (PQAs). Long-lead and key supply chain elements have been identified, and supply chain risk mitigation strategies exist. 
BioMRL7: Demonstration of systems or subsystems in a production representative environment Detailed system design is complete. Manufacturing processes and procedures have been demonstrated in a production representative environment. Sufficient quantities of product have been made to test packaging and distribution systems. Unit cost reduction strategies, such as statistical process controls (SPCs), are underway in a production representative environment. Quality assurance of supply chains is in place, and procurement schedules for long-lead elements are established. The manufacturing process is sufficient to support low-level commercial manufacturing. 
BioMRL8:Manufacturing line demonstrated, ready for low-rate initial production (LRIP) This maturity level is associated with manufacturing readiness for entry into LRIP. The detailed system design is complete and sufficiently stable to enter LRIP. All materials, manpower, tooling, test equipment, and facilities are proven on the manufacturing line and are available to meet the planned low-rate production schedule. STE/SIE has been validated in accordance with plans. Manufacturing and quality processes and procedures have been proven and are ready for LRIP. Known technical and business risks pose no significant challenges for LRIP. The cost model and yield and rate analyses have been updated with manufacturing line results. Supplier qualification testing and first article inspections have been completed. The industrial base has been assessed and shows that industrial capability is established to support LRIP. 
BioMRL9:Low rate production demonstrated; Capability in place to begin full rate production (FRP) Manufacturing has successfully achieved LRIP and is ready to enter FRP. All systems engineering/design requirements have been met such that there are minimal system changes. Major system design features are stable and have been proven in operational tests and evaluations. Materials, parts, manpower, tooling, test equipment, and facilities are available to meet planned rate production schedules. STE/SIE validation is maintained and re-validated as necessary. Manufacturing process capability is at an appropriate quality level to meet customer tolerances. LRIP cost targets have been met. The cost model has been updated for FRP and reflects the impact of continuous improvement. 
BioMRL10:FRP demonstrated and lean production practices in place Engineering/design changes are few and generally limited to continuous improvement changes or obsolescence issues. System, components, and items are in FRP and meet all engineering, performance, quality, and reliability requirements. Manufacturing process capability is at the appropriate quality level. All materials, tooling, inspection and test equipment, facilities, and manpower are in place and have met FRP requirements. Process infrastructure and analytical equipment validation are maintained and re-validated as necessary. Rate production unit costs meet goals, and funding is sufficient for production at the required rates. Continuous process improvements based on risks identified during FRP are ongoing. 
BioMRLSummary description of BioMRL1-10
BioMRL1:Basic manufacturing implications identified Prior to physical research and development efforts, a study of manufacturing capacity is performed. Criteria include identification and investigation of global trends in the industrial base, manufacturing science, material availability, supply chain, and metrology. 
BioMRL2:Manufacturing concepts identified Key manufacturing concepts have been identified, including broad-based studies that address analysis of material and process approaches, material effects and availability, potential supply chains, needed workforce skillsets, potential future investments, etc. Manufacturing scale and quality requirements for potential markets are identified and analyzed. An understanding of manufacturing feasibility and risk is emerging. 
BioMRL3:Manufacturing subsystems or components Components of the biomanufacturing process have been proven in a laboratory environment. This includes genetic engineering efforts needed to create strains capable of producing the desired products in titers that support the transition to pilot-scale production (typically in excess of 1 g/L). Methods for the purification and analysis of the product of interest are also required but can rely on lab-scale equipment that is not suitable for larger-scale DSP. 
BioMRL4: Independent validation and verification of proof-of-concept The proof-of-concept system has been demonstrated in a strain suitable for commercial-scale manufacturing and has been independently reproduced/validated/verified. Additionally, an initial assessment of the manufacturability is complete, including preliminary techno-economic analysis (TEA) and life-cycle analysis (LCA). This assessment should include plans for the scale-up production (SUP) and downstream processing (DSP) needed to produce sufficient quantities to allow testing and evaluation by downstream stakeholders. These plans incorporate production-relevant environments. Product quality risks and mitigation plans are documented. 
BioMRL5: Demonstration of prototype unit operations in a production relevant environment Identification of enabling/critical unit operations is complete. Prototype materials, tooling, and test equipment, as well as personnel skills, have been demonstrated empirically for unit operations in a production-relevant environment. Scale-up production and downstream processing have been performed at suitable scales to deliver sufficient quantities of end-product to downstream stakeholders for testing and evaluation. The TEA has been further refined to assess projected manufacturing costs. A risk management plan to mitigate technical and economic risks is integrated with the manufacturing strategy. 
BioMRL6: Demonstration of a prototype system or subsystem in a production relevant environment Manufacturing processes have been selected for the end-to-end manufacturing pipeline, even if engineering and/or design variables still need to be optimized. Prototype manufacturing processes and technologies, materials, tooling, and test equipment, as well as personnel skills, have been demonstrated on systems and/or subsystems in a production-relevant environment. The TEA is refined based on system performance and is expanded to include inventory control, production scheduling, plant maintenance, and production quality attributes (PQAs). Long-lead and key supply chain elements have been identified, and supply chain risk mitigation strategies exist. 
BioMRL7: Demonstration of systems or subsystems in a production representative environment Detailed system design is complete. Manufacturing processes and procedures have been demonstrated in a production representative environment. Sufficient quantities of product have been made to test packaging and distribution systems. Unit cost reduction strategies, such as statistical process controls (SPCs), are underway in a production representative environment. Quality assurance of supply chains is in place, and procurement schedules for long-lead elements are established. The manufacturing process is sufficient to support low-level commercial manufacturing. 
BioMRL8:Manufacturing line demonstrated, ready for low-rate initial production (LRIP) This maturity level is associated with manufacturing readiness for entry into LRIP. The detailed system design is complete and sufficiently stable to enter LRIP. All materials, manpower, tooling, test equipment, and facilities are proven on the manufacturing line and are available to meet the planned low-rate production schedule. STE/SIE has been validated in accordance with plans. Manufacturing and quality processes and procedures have been proven and are ready for LRIP. Known technical and business risks pose no significant challenges for LRIP. The cost model and yield and rate analyses have been updated with manufacturing line results. Supplier qualification testing and first article inspections have been completed. The industrial base has been assessed and shows that industrial capability is established to support LRIP. 
BioMRL9:Low rate production demonstrated; Capability in place to begin full rate production (FRP) Manufacturing has successfully achieved LRIP and is ready to enter FRP. All systems engineering/design requirements have been met such that there are minimal system changes. Major system design features are stable and have been proven in operational tests and evaluations. Materials, parts, manpower, tooling, test equipment, and facilities are available to meet planned rate production schedules. STE/SIE validation is maintained and re-validated as necessary. Manufacturing process capability is at an appropriate quality level to meet customer tolerances. LRIP cost targets have been met. The cost model has been updated for FRP and reflects the impact of continuous improvement. 
BioMRL10:FRP demonstrated and lean production practices in place Engineering/design changes are few and generally limited to continuous improvement changes or obsolescence issues. System, components, and items are in FRP and meet all engineering, performance, quality, and reliability requirements. Manufacturing process capability is at the appropriate quality level. All materials, tooling, inspection and test equipment, facilities, and manpower are in place and have met FRP requirements. Process infrastructure and analytical equipment validation are maintained and re-validated as necessary. Rate production unit costs meet goals, and funding is sufficient for production at the required rates. Continuous process improvements based on risks identified during FRP are ongoing. 
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\ No newline at end of file diff --git a/tests/resources/hca/README.md b/tests/resources/hca/README.md new file mode 100644 index 0000000..fa68b05 --- /dev/null +++ b/tests/resources/hca/README.md @@ -0,0 +1,83 @@ +# The Human Cell Atlas Metadata Standards: JSON Schemas + +This repo contains the HCA metadata JSON schemas for **Core**, **Type**, and **Module** entities. Below is a brief description of the structure of the HCA JSON schemas. More details about the schema structure can be found in the [structure document](../docs/structure.md). + +## Schema structure overview + +### User-supplied fields + +Metadata fields are divided into three major entities: Core, Type, and Module. + +Metadata fields in **Core** entity schemas are those that apply to 100% of all entities and are highly stable. Example Core fields include those for IDs and accessions. Core fields are inherited by Type entities. + +Metadata fields in **Type** entity schemas are those that apply to a majority of entities and are moderately stable. Example Type fields include Height and Weight for donors and total estimated cell count for cell suspensions. + +Metadata fields in **Module** entity schemas are those that apply to a small number of entities or may be shared across different entities. Example Module fields include Cause of death for donors and Publication information (which can apply to both projects and biomaterials like cell lines). **Ontology** specifications are a special class of Module entity schemas. + +### Ingest-supplied fields + +Some metadata about a submitted dataset is provided by the [HCA Ingestion Service](https://github.com/HumanCellAtlas/ingest-central) including information about when a dataset was submitted and how all the Type entities relate to each other. The HCA JSON schemas describing these attributes are located in the `system/` directory. Data contributors do not need to know about these schemas. + +## Schema structure rules + +The following rules are followed by HCA JSON schemas: + +1. Core schemas can not reference Type or Module schemas. +1. All Type schemas must reference their associated Core schema. +1. Module schemas can only reference Ontology schemas. +1. A set of fields that are logically grouped or only applicable in certain situations should be put into their own Module schema. +1. Core, Type, and Module schemas are grouped by their entity category (Biomaterial, File, Process, Project, Protocol). + +These rules are tested on every push to github by our schema linter, integrated within the travis CI. + +## Directory structure of schemas + +``` +core/ + biomaterial/ + biomaterial_core.json + file/ + file_core.json + process/ + process_core.json + project/ + project_core.json + protocol/ + protocol_core.json +module/ + biomaterial/ + cell_morphology.json + ... + ontology/ + biological_macromolecule_ontology.json + ... + process/ + purchased_reagents.json + ... + project/ + contact.json + ... + protocol/ + channel.json + ... +type/ + biomaterial/ + cell_line.json + ... + file/ + analysis_file.json + ... + process/ + analysis/ + analysis_process.json + ... + project/ + project.json + protocol/ + analysis/ + analysis_protocol.json + ... +system/ + links.json + provenance.json +``` diff --git a/tests/resources/hca/core/biomaterial/biomaterial_core.json b/tests/resources/hca/core/biomaterial/biomaterial_core.json new file mode 100644 index 0000000..75fd66f --- /dev/null +++ b/tests/resources/hca/core/biomaterial/biomaterial_core.json @@ -0,0 +1,88 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about any biological material that was generated/used in the project including everything from a whole organism to subcellular components.", + "additionalProperties": false, + "required": [ + "biomaterial_id", + "ncbi_taxon_id" + ], + "title": "Biomaterial core", + "name": "biomaterial_core", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/core/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/biomaterial_core" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^\\d+\\.\\d+\\.\\d+$", + "example": "4.6.1" + }, + "biomaterial_id":{ + "description": "A unique ID for the biomaterial.", + "type": "string", + "user_friendly": "Biomaterial ID" + }, + "biomaterial_name": { + "description": "A short, descriptive name for the biomaterial that need not be unique.", + "type": "string", + "user_friendly": "Biomaterial name" + }, + "biomaterial_description": { + "description": "A general description of the biomaterial.", + "type": "string", + "user_friendly": "Biomaterial description" + }, + "ncbi_taxon_id" : { + "description": "A taxonomy ID (taxonID) from NCBI.", + "type" : "array", + "items":{ + "type": "integer" + }, + "user_friendly": "NCBI taxon ID", + "example": 9606 + }, + "genotype": { + "description": "Genotype of the biomaterial.", + "type": "string", + "user_friendly": "Genotype", + "example": "DRB1 0401 protective allele; HLA-B*3901 allele" + }, + "supplementary_files": { + "description": "A list of filenames of biomaterial-level supplementary files.", + "type": "array", + "items": { + "type": "string" + }, + "user_friendly": "Supplementary files", + "example": "sample_site_image.jpg" + }, + "biosamples_accession": { + "description": "A BioSamples accession.", + "type": "string", + "pattern": "^SAM(D|N|E([AG]?))[0-9]+$", + "user_friendly": "BioSamples accession", + "example": "SAMN00000000", + "guidelines": "Enter accession if sample has been archived. Accession can be from the DDBJ, NCBI, or EMBL-EBI and must start with SAMD, SAMN, or SAME, respectively." + }, + "insdc_sample_accession": { + "description": "An International Nucleotide Sequence Database Collaboration (INSDC) sample accession.", + "type": "string", + "pattern": "^[DES]RS[0-9]+$", + "user_friendly": "INSDC sample accession", + "example": "SRS0000000", + "guidelines": "Enter accession if sample has been archived. Accession can be from the DDBJ, NCBI, or EMBL-EBI and must start with DRS, SRS, or ERS, respecitvely." + }, + "HDBR_accession": { + "description": "A Human Developmental Biology Resource (HDBR) sample accession.", + "type": "string", + "pattern": "(^[0-9]{5})(,\\s[0-9]{1,},\\s[a-zA-Z]+$){0,1}", + "user_friendly": "HDBR accession", + "example": "34526; 14758, 2, liver", + "guidelines": "Enter accession if sample has been obtained from the Human Developmental Biology Resource (HDBR)." + } + } +} diff --git a/tests/resources/hca/core/file/file_core.json b/tests/resources/hca/core/file/file_core.json new file mode 100644 index 0000000..0489e4a --- /dev/null +++ b/tests/resources/hca/core/file/file_core.json @@ -0,0 +1,75 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about a file produced from any process.", + "additionalProperties": false, + "required": [ + "file_name", + "format" + ], + "title": "File core", + "name": "file_core", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/core/file/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/file_core" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "file_name": { + "description": "The name of the file.", + "type": "string", + "user_friendly": "File name", + "guidelines": "Include the file extension in the file name.", + "example": "R1.fastq.gz; codebook.json" + }, + "format": { + "description": "The format of the file.", + "type": "string", + "user_friendly": "File format", + "guidelines": "Indicate the full file extension including compression extensions.", + "example": "fastq.gz; tif" + }, + "content_description": { + "description": "General description of the contents of the file.", + "type": "array", + "user_friendly": "Content description", + "items":{ + "type": "object", + "$ref": "module/ontology/file_content_ontology.json" + } + }, + "checksum": { + "description": "MD5 checksum of the file.", + "type": "string", + "user_friendly": "Checksum", + "example": "e09a986c2e630130b1849d4bf9a94c06" + }, + "file_source": { + "description": "The source of the file. This is typically an organisation, repository, person or dedicated process.", + "type": "string", + "enum":[ + "DCP/2 Analysis", + "Contributor", + "ArrayExpress", + "HCA Release", + "GEO", + "SCEA", + "SCP", + "DCP/1 Matrix Service", + "LungMAP", + "Zenodo", + "Publication", + "DCP/2 Ingest" + ], + "user_friendly": "File source", + "guidelines": "Should be one of: DCP/2 Analysis, Contributor, ArrayExpress, HCA Release, GEO, SCEA, SCP, DCP/1 Matrix Service, LungMAP, Zenodo, Publication, DCP/2 Ingest", + "example": "GEO; Contributor" + } + } +} diff --git a/tests/resources/hca/core/process/process_core.json b/tests/resources/hca/core/process/process_core.json new file mode 100644 index 0000000..de8006a --- /dev/null +++ b/tests/resources/hca/core/process/process_core.json @@ -0,0 +1,56 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information relevant to how a biomaterial or file was converted into another biomaterial or file.", + "additionalProperties": false, + "required": [ + "process_id" + ], + "title": "Process core", + "name": "process_core", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/core/process/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/process_core" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "process_id": { + "description": "A unique ID for the process.", + "type": "string", + "user_friendly": "Process ID" + }, + "process_name": { + "description": "A short, descriptive name for the process that need not be unique.", + "type": "string", + "user_friendly": "Process name" + }, + "process_description": { + "description": "A general description of the process.", + "type": "string", + "user_friendly": "Process description" + }, + "location": { + "description": "Location where the process took place.", + "type": "string", + "example": "Wellcome Trust Sanger Institute; Cancer Institute Stanford University", + "user_friendly": "Location" + }, + "operators": { + "description": "Identifier for individual(s) who executed the process.", + "type": "array", + "example": "Technician 1; JD; John Doe", + "items":{ + "type": "string" + }, + "user_friendly": "Operator(s)", + "guidelines": "Enter either the name(s) or identifier(s) of the individual(s)." + } + } +} + diff --git a/tests/resources/hca/core/project/project_core.json b/tests/resources/hca/core/project/project_core.json new file mode 100644 index 0000000..28d889a --- /dev/null +++ b/tests/resources/hca/core/project/project_core.json @@ -0,0 +1,46 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the project.", + "additionalProperties": false, + "required": [ + "project_short_name", + "project_title", + "project_description" + ], + "title": "Project core", + "name": "project_core", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/core/project/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/project_core" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "project_short_name": { + "description": "A short name for the project.", + "type": "string", + "example": "CoolOrganProject.", + "user_friendly": "Project label", + "guidelines": "Project label is a short label by which you refer to the project. It should have no spaces and should be fewer than 50 characters." + }, + "project_title": { + "description": "An official title for the project.", + "type": "string", + "example": "Study of single cells in the human body.", + "user_friendly": "Project title", + "guidelines": "Project title should be fewer than 30 words, such as a title of a grant proposal or a publication." + }, + "project_description": { + "description": "A longer description of the project which includes research goals and experimental approach.", + "type": "string", + "user_friendly": "Project description", + "guidelines": "Project description should be fewer than 300 words, such as an abstract from a grant application or publication." + } + } +} diff --git a/tests/resources/hca/core/protocol/protocol_core.json b/tests/resources/hca/core/protocol/protocol_core.json new file mode 100644 index 0000000..7efd471 --- /dev/null +++ b/tests/resources/hca/core/protocol/protocol_core.json @@ -0,0 +1,59 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about an intended protocol that was followed in the project.", + "additionalProperties": false, + "required": [ + "protocol_id" + ], + "title": "Protocol core", + "name": "protocol_core", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/core/protocol/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/protocol_core" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "protocol_id":{ + "description": "A unique ID for the protocol.", + "type": "string", + "user_friendly": "Protocol ID", + "guidelines": "Protocol ID should have no spaces." + }, + "protocol_name": { + "description": "A short name for the protocol.", + "type": "string", + "user_friendly": "Protocol name" + }, + "protocol_description": { + "description": "A general description of the protocol.", + "type": "string", + "user_friendly": "Protocol description" + }, + "publication_doi": { + "description": "The publication digital object identifier (doi) for the protocol.", + "type": "string", + "example": "10.1101/193219", + "user_friendly": "Publication DOI" + }, + "protocols_io_doi": { + "description": "The protocols.io digital object identifier (doi) for the protocol.", + "type": "string", + "example": "10.17504/protocols.io.mgjc3un", + "user_friendly": "protocols.io DOI" + }, + "document": { + "description": "A filename of a PDF document containing the details of the protocol.", + "type": "string", + "pattern": "^.*.pdf$", + "user_friendly": "Document filename", + "example": "my_cool_protocol.pdf" + } + } +} diff --git a/tests/resources/hca/module/biomaterial/cell_morphology.json b/tests/resources/hca/module/biomaterial/cell_morphology.json new file mode 100644 index 0000000..f8e94fd --- /dev/null +++ b/tests/resources/hca/module/biomaterial/cell_morphology.json @@ -0,0 +1,71 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information relating to pathological and morphological features of cells.", + "additionalProperties": false, + "title": "Cell morphology", + "name": "cell_morphology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/cell_morphology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "cell_morphology": { + "description": "General description of the morphology of cells.", + "type": "string", + "user_friendly": "Cell morphology", + "example": "adherent cells; form single layer colonies" + }, + "cell_size": { + "description": "Size of cells in Cell size unit.", + "type": "string", + "pattern": "^[0-9]+\\.?[0-9]*-?[0-9]*\\.?[0-9]*$", + "example": "15; 20-30", + "user_friendly": "Cell size", + "guidelines": "Enter a single value or a range. Average value is acceptable." + }, + "cell_size_unit": { + "description": "The unit in which the Cell size is expressed.", + "type": "object", + "$ref": "module/ontology/length_unit_ontology.json", + "user_friendly": "Cell size unit" + }, + "percent_cell_viability": { + "description": "Percent of cells determined to be viable.", + "type": "number", + "example": 98.7, + "user_friendly": "Percent cell viability", + "guidelines": "Enter a single number. Average value is acceptable." + }, + "cell_viability_method": { + "description": "The method by which cell viability was determined.", + "type": "string", + "example": "Fluorescein diacetate hydrolysis; ATP test", + "user_friendly": "Cell viability method" + }, + "cell_viability_result": { + "description": "Result of the cell viability test.", + "type": "string", + "enum": [ + "pass", + "fail" + ], + "example": "Should be one of: pass, fail", + "user_friendly": "Cell viability result" + }, + "percent_necrosis": { + "description" : "Percent of cells identified to be necrotic.", + "type": "number", + "example": 10, + "user_friendly": "Percent necrotic cells", + "guidelines": "Enter a single number. Average value is acceptable." + } + } +} diff --git a/tests/resources/hca/module/biomaterial/death.json b/tests/resources/hca/module/biomaterial/death.json new file mode 100644 index 0000000..6af1593 --- /dev/null +++ b/tests/resources/hca/module/biomaterial/death.json @@ -0,0 +1,93 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information relating to the death of an organism.", + "additionalProperties": false, + "required": [ + "cause_of_death" + ], + "title": "Death", + "name": "death", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/death" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "cause_of_death": { + "description": "Conditions resulting in death.", + "type": "string", + "user_friendly": "Cause of death", + "example": "Hypoxic brain damage; Sudden cardiac arrest", + "guidelines": "Determined from death report for human donor or from research lab for mouse." + }, + "cold_perfused": { + "description": "Whether perfusion with cold fluid was used to help preserve tissues before heart stopped.", + "type": "boolean", + "user_friendly": "Cold perfused", + "example": "Should be one of: yes, no.", + "guidelines": "Enter yes if cold perfused. Otherwise, enter no." + }, + "days_on_ventilator": { + "description": "Number of days on ventilator before death occurred.", + "maximum": 10000, + "minimum": 0, + "type": "number", + "example": 4, + "user_friendly": "Number of days on ventilator" + }, + "hardy_scale": { + "description": "Value on 4-point Hardy scale cause of death classification.", + "maximum": 4, + "minimum": 0, + "type": "integer", + "example": 0, + "user_friendly": "Value on Hardy scale", + "guidelines": "Enter: 0 for ventilator case, 1 for violent and fast death, 2 for fast death of natural causes, 3 for intermediate death, or 4 for slow death." + }, + "time_of_death": { + "description": "Date and time when death was declared.", + "type": "string", + "user_friendly": "Time of death", + "example": "2016-01-21T00:00:00Z; 2016-03", + "guidelines": "Enter the time in date-time format: yyyy-mm-ddThh:mm:ssZ. Supplying partial date is allowed.", + "oneOf": [ + { + "format": "date-time" + }, + { + "pattern": "^((19|20)\\d\\d){1}([- \\./][01]\\d){0,1}([- \\./][0-3]\\d){0,1}$" + } + ] + }, + "organ_donation_death_type": { + "description": "Type of death preceding organ donation.", + "type": "string", + "enum": [ + "Donation after circulatory death (DCD)", + "Donation after brainstem death (DBD)" + ], + "user_friendly": "Organ donation death type", + "example": "Should be one of: Donation after circulatory death (DCD), or Donation after brainstem death (DBD).", + "guidelines": "Enter value for organ donors only." + }, + "normothermic_regional_perfusion": { + "description": "Whether entire body was perfused with warm oxygenated blood.", + "type": "string", + "enum": [ + "yes", + "no", + "unknown" + ], + "user_friendly": "Normothermic regional perfusion", + "example": "Should be one of: yes, no, or unknown.", + "guidelines": "Enter yes if entire body (but not limbs) was perfused with warm oxygenated blood. Otherwise, enter no." + } + } +} diff --git a/tests/resources/hca/module/biomaterial/familial_relationship.json b/tests/resources/hca/module/biomaterial/familial_relationship.json new file mode 100644 index 0000000..f982fc2 --- /dev/null +++ b/tests/resources/hca/module/biomaterial/familial_relationship.json @@ -0,0 +1,39 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about other organisms that this organism is related to.", + "additionalProperties": false, + "title": "Familial relationship", + "name": "familial_relationship", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/familial_relationship" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "parent": { + "description": "The individual's parent.", + "type": "string", + "user_friendly": "Parent", + "guidelines": "Enter the ID of the parent of this individual." + }, + "child": { + "description": "The individual's child.", + "type": "string", + "user_friendly": "Child", + "guidelines": "Enter the ID of the child of this individual." + }, + "sibling": { + "description": "The individual's sibling.", + "type": "string", + "user_friendly": "Sibling", + "guidelines": "Enter the ID of the sibling of this individual." + } + } +} diff --git a/tests/resources/hca/module/biomaterial/growth_conditions.json b/tests/resources/hca/module/biomaterial/growth_conditions.json new file mode 100644 index 0000000..f890d21 --- /dev/null +++ b/tests/resources/hca/module/biomaterial/growth_conditions.json @@ -0,0 +1,109 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information relating to how a biomaterial was grown and/or maintained in a laboratory setting.", + "additionalProperties": false, + "title": "Growth conditions", + "name": "growth_conditions", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/growth_conditions" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "passage_number": { + "description": "The number of passages that the biomaterial has been through.", + "maximum": 1000, + "minimum": 0, + "type": "integer", + "example": 22, + "user_friendly": "Passage number", + "guidelines": "Enter a single integer." + }, + "growth_medium": { + "description": "The solid, liquid, or semi-solid medium used to support growth.", + "type": "string", + "example": "human placental cord serum; RPMI 1640 + 2mM Glutamine + 10-20% FBS", + "user_friendly": "Growth medium" + }, + "culture_environment": { + "description": "Cell culture environment in which cells are grown.", + "type": "string", + "example": "Adherent cell culture; Suspension cell culture", + "user_friendly": "Culture environment" + }, + "mycoplasma_testing_method": { + "description": "The method by which the biomaterial was tested for mycoplasma contamination.", + "type": "string", + "enum": [ + "Direct DNA stain", + "Indirect DNA stain", + "Broth and agar culture", + "PCR", + "Nested PCR", + "ELISA", + "Autoradiography", + "Immunostaining", + "Cell-based assay", + "Microbiological assay" + ], + "example": "Should be one of: Direct DNA stain, Indirect DNA stain, Broth and agar culture, PCR, Nested PCR, ELISA, Autoradiography, Immunostaining, Cell-based assay, or Microbiological assay.", + "user_friendly": "Mycoplasma testing method" + }, + "mycoplasma_testing_results": { + "description": "Whether the biomaterial passed or failed the mycoplasma test.", + "type": "string", + "enum": [ + "pass", + "fail" + ], + "example": "Should be one of: pass, or fail.", + "user_friendly": "Mycoplasma testing results" + }, + "drug_treatment": { + "description": "Description of drugs added to the growth medium.", + "type": "string", + "example": "100 ug/mL ampicillin; 15 ug/mL tetracycline", + "user_friendly": "Drug treatment", + "guidelines": "Provide the drug name and concentration with units. List multiple drugs separated by commas." + }, + "feeder_layer_type": { + "description": "Type of feeder layer cells on which biomaterial was grown.", + "type": "string", + "enum": [ + "feeder-free", + "feeder-dependent, JK1 feeder cells", + "feeder-dependent, SNL 76/7 feeder cells", + "feeder-dependent, human marrow stromal cells", + "feeder-dependent, bovine embryonic fibroblast cells", + "feeder-dependent, mouse embryonic fibroblast cells", + "feeder-dependent, mouse fibroblast STO cells", + "feeder-dependent, mouse bone marrow stromal cells", + "feeder-dependent, mouse yolk sac-derived endothelial cells", + "feeder-dependent, human foreskin fibroblast cells", + "feeder-dependent, human newborn fibroblast cells", + "feeder-dependent, human fetal lung fibroblast cells", + "feeder-dependent, human uterine endometrial cells", + "feeder-dependent, human breast parenchymal cells", + "feeder-dependent, human embryonic fibroblast cells", + "feeder-dependent, human adipose stromal cells", + "feeder-dependent, human amniotic epithelial cells", + "feeder-dependent, human placental fibroblast cells", + "feeder-dependent, human umbilical cord stromal cells", + "feeder-dependent, human fetal muscle cells", + "feeder-dependent, human fetal skin cells", + "feeder-dependent, human fetal liver stromal cells", + "feeder-dependent, human fallopian tubal epithelial cells", + "feeder-dependent, human amniotic mesenchymal cells" + ], + "example": "feeder-free; feeder-dependent, mouse embryonic fibroblast cells", + "user_friendly": "Feeder layer type" + } + } +} diff --git a/tests/resources/hca/module/biomaterial/human_specific.json b/tests/resources/hca/module/biomaterial/human_specific.json new file mode 100644 index 0000000..8a26c68 --- /dev/null +++ b/tests/resources/hca/module/biomaterial/human_specific.json @@ -0,0 +1,38 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information specific to a donor that is a human (Homo sapiens).", + "additionalProperties": false, + "title": "Human-specific", + "name": "human_specific", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/human_specific" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "body_mass_index": { + "description": "The body mass index of the donor.", + "type": "number", + "maximum": 100, + "minimum": 5, + "example": 36.4, + "user_friendly": "Body mass index" + }, + "ethnicity": { + "description": "Ethnicity of the donor.", + "type": "array", + "items": { + "$ref": "module/ontology/ethnicity_ontology.json" + }, + "user_friendly": "Ethnicity", + "guidelines": "Enter one or more ethnicities, separated by a comma." + } + } +} diff --git a/tests/resources/hca/module/biomaterial/medical_history.json b/tests/resources/hca/module/biomaterial/medical_history.json new file mode 100644 index 0000000..5382ca1 --- /dev/null +++ b/tests/resources/hca/module/biomaterial/medical_history.json @@ -0,0 +1,65 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the medical history of a donor.", + "additionalProperties": false, + "title": "Medical history", + "name": "medical_history", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/medical_history" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "alcohol_history": { + "description": "Estimated amount of alcohol consumed per day.", + "type": "string", + "user_friendly": "Alcohol history", + "example": "3-6 alcohol units/day; 1 drink per day", + "guidelines": "Enter the amount consumed per day using units such as alcohol units (10mL or 8g of alcohol) or drinks (14g of alcohol)." + }, + "medication": { + "description": "Medications the individual was taking at time of biomaterial collection.", + "type": "string", + "user_friendly": "Medications", + "example": "Naproxen 500mg/day; Citalopram 20mg/day", + "guidelines": "Enter the medication and dosage. Separate multiple medications with commas." + }, + "smoking_history": { + "description": "Estimated number of cigarettes smoked per day.", + "type": "string", + "user_friendly": "Smoking history", + "example": "20 cigarettes/day for 25 years, stopped 2000", + "guidelines": "Enter an estimated number of cigarettes smoked per day and for how many years." + }, + "nutritional_state": { + "description": "Nutritional state of individual at time of biomaterial collection.", + "type": "string", + "enum": [ + "normal", + "fasting", + "feeding tube removed" + ], + "user_friendly": "Nutritional state", + "example": "Should be one of: normal, fasting, or feeding tube removed." + }, + "test_results": { + "description": "Results from medical tests performed on the individual.", + "type": "string", + "user_friendly": "Test results", + "example": "lipid panel shows normal level of LDL (124 mg/dL); HIV, HBV, HCV: Negative" + }, + "treatment": { + "description": "Treatments the individual has undergone prior to biomaterial collection.", + "type": "string", + "user_friendly": "Treatments", + "example": "Patient treated with antibiotics for a urinary tract infection; Patient treated with chemotherapy (Epirubicin, cisplatin, capecitabine) to treat stomach cancer" + } + } +} diff --git a/tests/resources/hca/module/biomaterial/mouse_specific.json b/tests/resources/hca/module/biomaterial/mouse_specific.json new file mode 100644 index 0000000..9eec96b --- /dev/null +++ b/tests/resources/hca/module/biomaterial/mouse_specific.json @@ -0,0 +1,29 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information specific to an organism that is a mouse (Mus musculus).", + "additionalProperties": false, + "title": "Mouse-specific", + "name": "mouse_specific", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/mouse_specific" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "strain": { + "description": "The name of the mouse strain.", + "type": "array", + "items": { + "$ref": "module/ontology/strain_ontology.json" + }, + "user_friendly": "Mouse strain" + } + } +} diff --git a/tests/resources/hca/module/biomaterial/preservation_storage.json b/tests/resources/hca/module/biomaterial/preservation_storage.json new file mode 100644 index 0000000..6aa01c4 --- /dev/null +++ b/tests/resources/hca/module/biomaterial/preservation_storage.json @@ -0,0 +1,71 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information relating to how a biomaterial was preserved and/or stored over a period of time.", + "additionalProperties": false, + "title": "Preservation and storage", + "name": "preservation_storage", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/preservation_storage" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "storage_method": { + "description": "The method by which a biomaterial was stored after preservation or before another protocol was used.", + "type": "string", + "enum": [ + "ambient temperature", + "cut slide", + "fresh", + "frozen at -70C", + "frozen at -80C", + "frozen at -150C", + "frozen in liquid nitrogen", + "frozen in vapor phase", + "paraffin block", + "RNAlater at 4C", + "RNAlater at 25C", + "RNAlater at -20C" + ], + "example": "frozen in liquid nitrogen; fresh", + "user_friendly": "Storage method" + }, + "storage_time": { + "description": "Length of time the biomaterial was stored for in Storage time units.", + "type": "number", + "example": 5, + "user_friendly": "Storage time" + }, + "storage_time_unit": { + "description": "The unit in which Storage time is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Storage time unit" + }, + "preservation_method": { + "description": "The method by which a biomaterial was preserved through the use of chemicals, cold, or other means to prevent or retard biological or physical deterioration.", + "type": "string", + "enum": [ + "cryopreservation in liquid nitrogen (dead tissue)", + "cryopreservation in dry ice (dead tissue)", + "cryopreservation of live cells in liquid nitrogen", + "cryopreservation, other", + "formalin fixed, unbuffered", + "formalin fixed, buffered", + "formalin fixed and paraffin embedded", + "hypothermic preservation media at 2-8C", + "fresh" + ], + "example": "cryopreservation in liquid nitrogen (dead tissue); fresh", + "user_friendly": "Preservation method", + "guidelines": "Enter 'fresh' if not preserved." + } + } +} diff --git a/tests/resources/hca/module/biomaterial/state_of_specimen.json b/tests/resources/hca/module/biomaterial/state_of_specimen.json new file mode 100644 index 0000000..b0b50da --- /dev/null +++ b/tests/resources/hca/module/biomaterial/state_of_specimen.json @@ -0,0 +1,92 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "State of specimen at time of collection.", + "additionalProperties": false, + "title": "State of specimen", + "name": "state_of_specimen", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/state_of_specimen" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "autolysis_score": { + "description": "State of tissue breakdown due to self-digestion.", + "type": "string", + "enum": [ + "none", + "mild", + "moderate" + ], + "user_friendly": "Autolysis score", + "example": "Should be one of: none, mild, or moderate." + }, + "gross_description": { + "description": "Color, size, and other aspects of specimen as visible to naked eye.", + "type": "string", + "user_friendly": "Gross description", + "example": "focal wedge shaped region of tan-orange discoloration; cystic" + }, + "gross_images": { + "description": "List of filenames of photographs of specimen without magnification.", + "type": "array", + "items": { + "pattern": "^.*.jpg$|^.*.jpeg$|^.*.tiff$|^.*.png$", + "type": "string" + }, + "user_friendly": "Gross image", + "example": "my_gross_image_file.jpg", + "guidelines": "File must be of format JPEG, TIFF, or PNG." + }, + "ischemic_temperature": { + "description": "Whether specimen experienced warm or cold ischemia.", + "type": "string", + "enum": [ + "warm", + "cold" + ], + "user_friendly": "Ischemic temperature", + "example": "Should be one of: warm, or cold." + }, + "ischemic_time": { + "description": "Duration of time, in seconds, between when the specimen stopped receiving oxygen and when it was preserved or processed.", + "type": "integer", + "maximum": 1000000, + "minimum": 0, + "example": 7200, + "user_friendly": "Ischemic time" + }, + "microscopic_description": { + "description": "How the specimen looks under the microscope and how it compares with normal cells.", + "type": "string", + "user_friendly": "Microscopic description", + "example": "Mixture of different cell sizes apparent; Dead cells are quite faint on microscope" + }, + "microscopic_images": { + "description": "List of filenames of photographs of specimen under microscope.", + "type": "array", + "items": { + "type": "string", + "pattern": "^.*.jpg$|^.*.jpeg$|^.*.tiff$|^.*.png$" + }, + "user_friendly": "Microscopic image", + "example": "my_microscopic_image_file.jpg", + "guidelines": "File must be of format JPEG, TIFF, or PNG." + }, + "postmortem_interval": { + "description": "Duration of time between when death was declared and when the specimen was preserved or processed.", + "type": "integer", + "minimum": 0, + "example": 2400, + "user_friendly": "Post-mortem interval", + "guidelines": "Enter time in seconds." + } + } +} diff --git a/tests/resources/hca/module/biomaterial/timecourse.json b/tests/resources/hca/module/biomaterial/timecourse.json new file mode 100644 index 0000000..43efddc --- /dev/null +++ b/tests/resources/hca/module/biomaterial/timecourse.json @@ -0,0 +1,45 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information relating to a timecourse.", + "additionalProperties": false, + "required": [ + "value", + "unit" + ], + "title": "Timecourse", + "name": "timecourse", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/timecourse" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "value": { + "description": "The numerical value in Timecourse unit associated with a time interval used in the experiment.", + "pattern": "^[0-9]+\\.?[0-9]*-?[0-9]*\\.?[0-9]*$", + "type": "string", + "example": "2; 5.5-10.5", + "user_friendly": "Timecourse value", + "guidelines": "Enter either a single value or a range of values. Indicate a range using a hyphen." + }, + "unit": { + "description": "The unit in which the Timecourse value is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Timecourse unit" + }, + "relevance": { + "description": "Relevance of the Timecourse value/unit to the experiment.", + "type": "string", + "example": "Collection after tumor cells injected into the mammary gland; Time tissue underwent liberase digestion", + "user_friendly": "Timecourse relevance" + } + } +} diff --git a/tests/resources/hca/module/ontology/biological_macromolecule_ontology.json b/tests/resources/hca/module/ontology/biological_macromolecule_ontology.json new file mode 100644 index 0000000..03c9723 --- /dev/null +++ b/tests/resources/hca/module/ontology/biological_macromolecule_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a biological macromolecule-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Biological macromolecule ontology", + "name": "biological_macromolecule_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/biological_macromolecule_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of the biological macromolecule being used.", + "type": "string", + "example": "polyA RNA; mRNA", + "user_friendly": "Biological macromolecule" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:chebi", "obo:obi"], + "classes": ["EFO:0004446"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "OBI:0000869; CHEBI:33699", + "user_friendly": "Biological macromolecule ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "polyA RNA; messenger RNA", + "user_friendly": "Biological macromolecule ontology label" + } + } +} diff --git a/tests/resources/hca/module/ontology/cell_cycle_ontology.json b/tests/resources/hca/module/ontology/cell_cycle_ontology.json new file mode 100644 index 0000000..292faa9 --- /dev/null +++ b/tests/resources/hca/module/ontology/cell_cycle_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a cell cycle-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Cell cycle ontology", + "name": "cell_cycle_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/cell_cycle_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a cell cycle of the cells in the specimen.", + "type": "string", + "user_friendly": "Cell cycle", + "example": "meiotic cell cycle; mitotic G1 phase" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:hcao", "obo:go"], + "classes": ["GO:0007049", "GO:0022403"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Cell cycle ontology ID", + "example": "GO:0051321; GO:0000080" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Cell cycle ontology label", + "example": "meiotic cell cycle; mitotic G1 phase" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/cell_type_ontology.json b/tests/resources/hca/module/ontology/cell_type_ontology.json new file mode 100644 index 0000000..f86ff17 --- /dev/null +++ b/tests/resources/hca/module/ontology/cell_type_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a cell type-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Cell type ontology", + "name": "cell_type_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/cell_type_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a cell type supplied by a user.", + "type": "string", + "user_friendly": "Cell type", + "example": "bone marrow hematopoietic cell; cardiac muscle cell" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:hcao", "obo:cl"], + "classes": ["CL:0000003"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Cell type ontology ID", + "example": "CL:1001610; CL:0000746" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Cell type ontology label", + "example": "bone marrow hematopoietic cell; cardiac muscle cell" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/cellular_component_ontology.json b/tests/resources/hca/module/ontology/cellular_component_ontology.json new file mode 100644 index 0000000..d42df50 --- /dev/null +++ b/tests/resources/hca/module/ontology/cellular_component_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with an intra-cellular structure ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Cellular component ontology", + "name": "cellular_component_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/cellular_component_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a subcellular structure.", + "type": "string", + "user_friendly": "Subcellular structure", + "example": "cytoplasm; nucleus" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:hcao", "obo:go"], + "classes": ["GO:0005575"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Subcellular structure ontology ID", + "example": "GO:0005737; GO:0005634" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Subcellular structure ontology label", + "example": "cytoplasm; nucleus" + } + } +} diff --git a/tests/resources/hca/module/ontology/contributor_role_ontology.json b/tests/resources/hca/module/ontology/contributor_role_ontology.json new file mode 100644 index 0000000..b3c4290 --- /dev/null +++ b/tests/resources/hca/module/ontology/contributor_role_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that describes the role of a contributor in the project.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Contributor role ontology", + "name": "contributor_role_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/contributor_role_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The primary role of the contributor in the project.", + "type": "string", + "example": "principal investigator; experimental scientist", + "user_friendly": "Contributor role" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo"], + "classes": ["BFO:0000023"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "EFO:0009736; EFO:0009741", + "user_friendly": "Contributor role ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "principal investigator; experimental scientist", + "user_friendly": "Contributor role ontology label" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/development_stage_ontology.json b/tests/resources/hca/module/ontology/development_stage_ontology.json new file mode 100644 index 0000000..bd743b1 --- /dev/null +++ b/tests/resources/hca/module/ontology/development_stage_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a development stage-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Development stage ontology", + "name": "development_stage_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/development_stage_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of the development stage of the organism.", + "type": "string", + "user_friendly": "Development stage", + "example": "human adult stage; Theiler stage 28" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:hcao"], + "classes": ["EFO:0000399", "HsapDv:0000000", "UBERON:0000105"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Development stage ontology ID", + "example": "HsapDv:0000087; EFO:0002588" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Development stage ontology label", + "example": "human adult stage; Theiler stage 28" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/disease_ontology.json b/tests/resources/hca/module/ontology/disease_ontology.json new file mode 100644 index 0000000..db0e3b0 --- /dev/null +++ b/tests/resources/hca/module/ontology/disease_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a disease-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Disease ontology", + "name": "disease_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/disease_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The text for the term as the user provides it.", + "type": "string", + "user_friendly": "Disease", + "example": "type 2 diabetes mellitus; normal" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:mondo", "obo:efo", "obo:hp"], + "classes": ["MONDO:0000001", "PATO:0000461", "HP:0000118"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": true + }, + "user_friendly": "Disease ontology ID", + "example": "MONDO:0005148; PATO:0000461; HP:0001397" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Disease ontology label", + "example": "type 2 diabetes mellitus; normal" + } + } +} diff --git a/tests/resources/hca/module/ontology/enrichment_ontology.json b/tests/resources/hca/module/ontology/enrichment_ontology.json new file mode 100644 index 0000000..922c890 --- /dev/null +++ b/tests/resources/hca/module/ontology/enrichment_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a process-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Enrichment ontology", + "name": "enrichment_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/enrichment_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of an enrichment approach being used.", + "type": "string", + "user_friendly": "Enrichment", + "example": "fluorescence-activated cell sorting; Ficoll-Hypaque method" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo"], + "classes": ["EFO:0009090"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Enrichment ontology ID", + "example": "EFO:0009108; EFO:0009110" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Enrichment ontology label", + "example": "fluorescence-activated cell sorting; Ficoll-Hypaque method" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/ethnicity_ontology.json b/tests/resources/hca/module/ontology/ethnicity_ontology.json new file mode 100644 index 0000000..59538cb --- /dev/null +++ b/tests/resources/hca/module/ontology/ethnicity_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a ethnicity-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Ethnicity ontology", + "name": "ethnicity_ontology", + "type": "object", + "properties": { + "describedBy" : { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/ethnicity_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The ethnicity of the human donor.", + "type": "string", + "user_friendly": "Ethnicity", + "example": "European; Hispanic or Latin American" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:hancestro"], + "classes": ["HANCESTRO:0004"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Ethnicity ontology ID", + "example": "HANCESTRO:0005; HANCESTRO:0014" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Ethnicity ontology label", + "example": "European; Hispanic or Latin American" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/file_content_ontology.json b/tests/resources/hca/module/ontology/file_content_ontology.json new file mode 100644 index 0000000..ff54ade --- /dev/null +++ b/tests/resources/hca/module/ontology/file_content_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that describes the contents of a file.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "File content ontology", + "name": "file_content_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/file_content_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "General description of the contents of the file.", + "type": "string", + "example": "DNA sequence (raw); Sequence alignment", + "user_friendly": "Content description" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:edam", "obo:efo"], + "classes": ["data:0006", "IAO:0000030"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "data:3497; data:0863", + "user_friendly": "Content description ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "DNA sequence (raw); Sequence alignment", + "user_friendly": "Content description ontology label" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/file_format_ontology.json b/tests/resources/hca/module/ontology/file_format_ontology.json new file mode 100644 index 0000000..3fb9c46 --- /dev/null +++ b/tests/resources/hca/module/ontology/file_format_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a file format-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "File format ontology", + "name": "file_format_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/file_format" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of the file format.", + "type": "string", + "example": "FASTQ; JSON", + "user_friendly": "File format" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:edam"], + "classes": ["format:1915"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "format:1930; format:3464", + "user_friendly": "File format ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "FASTQ; JSON", + "user_friendly": "File format ontology label" + } + } +} diff --git a/tests/resources/hca/module/ontology/instrument_ontology.json b/tests/resources/hca/module/ontology/instrument_ontology.json new file mode 100644 index 0000000..359adc3 --- /dev/null +++ b/tests/resources/hca/module/ontology/instrument_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a instrument-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Instrument ontology", + "name": "instrument_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/instrument_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The full name of the instrument used.", + "type": "string", + "user_friendly": "Instrument", + "example": "Illumina HiSeq 2500; ONT MinION" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo"], + "classes": ["EFO:0000548"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Instrument ontology ID", + "example": "EFO:0008565; EFO:0008632" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Instrument ontology label", + "example": "Illumina HiSeq 2500; ONT MinION" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/length_unit_ontology.json b/tests/resources/hca/module/ontology/length_unit_ontology.json new file mode 100644 index 0000000..713a558 --- /dev/null +++ b/tests/resources/hca/module/ontology/length_unit_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a cell type-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Length unit ontology", + "name": "length_unit_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/length_unit_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a length unit being used.", + "type": "string", + "user_friendly": "Length unit", + "example": "micrometer; meter" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:uo"], + "classes": ["UO:0000001"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Length unit ontology ID", + "example": "UO:0000017; UO:0000008" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Length unit ontology label", + "example": "micrometer; meter" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/library_amplification_ontology.json b/tests/resources/hca/module/ontology/library_amplification_ontology.json new file mode 100644 index 0000000..f74f9f6 --- /dev/null +++ b/tests/resources/hca/module/ontology/library_amplification_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a process-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Library amplification ontology", + "name": "library_amplification_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/library_amplification_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a library amplification approach being used.", + "type": "string", + "user_friendly": "Library amplification", + "example": "PCR; in vitro transcription" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo"], + "classes": ["EFO:0009107"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Library amplification ontology ID", + "example": "OBI:0000415; EFO:0009013" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Library amplification ontology label", + "example": "PCR; in vitro transcription" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/library_construction_ontology.json b/tests/resources/hca/module/ontology/library_construction_ontology.json new file mode 100644 index 0000000..7215f8d --- /dev/null +++ b/tests/resources/hca/module/ontology/library_construction_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a process-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Library construction ontology", + "name": "library_construction_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/library_construction_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a library construction approach being used.", + "type": "string", + "user_friendly": "Library construction", + "example": "10X v2 sequencing; Smart-seq2" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo"], + "classes": ["OBI:0000711"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Library construction ontology ID", + "example": "EFO:0009310; EFO:0008931" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Library construction ontology label", + "example": "10X v2 sequencing; Smart-seq2" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/mass_unit_ontology.json b/tests/resources/hca/module/ontology/mass_unit_ontology.json new file mode 100644 index 0000000..e95c1eb --- /dev/null +++ b/tests/resources/hca/module/ontology/mass_unit_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a cell type-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Mass unit ontology", + "name": "mass_unit_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/mass_unit_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a mass unit being used.", + "type": "string", + "user_friendly": "Mass unit", + "example": "kilogram; microgram" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:uo"], + "classes": ["UO:0000002"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Mass unit ontology ID", + "example": "UO:0000009; UO:0000023" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Mass unit ontology label", + "example": "kilogram; microgram" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/microscopy_ontology.json b/tests/resources/hca/module/ontology/microscopy_ontology.json new file mode 100644 index 0000000..a521eec --- /dev/null +++ b/tests/resources/hca/module/ontology/microscopy_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a microscopy-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Microscopy ontology", + "name": "microscopy_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/microscopy_ontology", + "type": "string" + }, + "schema_version": { + "description": "Version number in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of the type of microscopy used in an imaging experiment.", + "type": "string", + "example": "confocal microscopy; fluorescence microscopy", + "user_friendly": "Microscopy" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:hcao", "obo:fbbi"], + "classes": ["FBbi:00000241"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "FBbi:00000251; FBbi:00000246", + "user_friendly": "Microscopy ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "confocal microscopy; fluorescence microscopy", + "user_friendly": "Microscopy ontology label" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/organ_ontology.json b/tests/resources/hca/module/ontology/organ_ontology.json new file mode 100644 index 0000000..5088c5f --- /dev/null +++ b/tests/resources/hca/module/ontology/organ_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with an anatomy-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Organ ontology", + "name": "organ_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/organ_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The text for the term as the user provides it.", + "type": "string", + "user_friendly": "Organ", + "example": "heart; immune system" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:hcao", "obo:uberon"], + "classes": ["UBERON:0000465"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": true + }, + "user_friendly": "Organ ontology ID", + "example": "UBERON:0000948; UBERON:0002405" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Organ ontology label", + "example": "heart; immune system" + } + } +} diff --git a/tests/resources/hca/module/ontology/organ_part_ontology.json b/tests/resources/hca/module/ontology/organ_part_ontology.json new file mode 100644 index 0000000..2d29f06 --- /dev/null +++ b/tests/resources/hca/module/ontology/organ_part_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with an anatomy-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Organ part ontology", + "name": "organ_part_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/organ_part_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The text for the term as the user provides it.", + "type": "string", + "user_friendly": "Organ part", + "example": "bone marrow; islet of Langerhans" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:hcao", "obo:uberon"], + "classes": ["UBERON:0000465"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": true + }, + "user_friendly": "Organ part ontology ID", + "example": "UBERON:0002371; UBERON:0000006" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Organ part ontology label", + "example": "bone marrow; islet of Langerhans" + } + } +} diff --git a/tests/resources/hca/module/ontology/process_type_ontology.json b/tests/resources/hca/module/ontology/process_type_ontology.json new file mode 100644 index 0000000..8ec9c8c --- /dev/null +++ b/tests/resources/hca/module/ontology/process_type_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a process-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Process type ontology", + "name": "process_type_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/process_type_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a process type being used.", + "type": "string", + "example": "enzymatic dissociation; blood draw", + "user_friendly": "Process type" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo"], + "classes": ["EFO:0002694"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "EFO:0009128; EFO:0009121", + "user_friendly": "Process type ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "enzymatic dissociation; blood draw", + "user_friendly": "Process type ontology label" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/protocol_type_ontology.json b/tests/resources/hca/module/ontology/protocol_type_ontology.json new file mode 100644 index 0000000..ca6af71 --- /dev/null +++ b/tests/resources/hca/module/ontology/protocol_type_ontology.json @@ -0,0 +1,48 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a protocol-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Protocol type ontology", + "name": "protocol_type_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/protocol_type_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a protocol type used.", + "type": "string", + "example": "dissociation protocol; enrichment protocol", + "user_friendly": "Protocol type" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:obi"], + "classes": ["OBI:0000272"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + },"example": "EFO:0009088; EFO:0009089", + "user_friendly": "Protocol type ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "dissociation protocol; enrichment protocol", + "user_friendly": "Protocol type ontology label" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/sequencing_ontology.json b/tests/resources/hca/module/ontology/sequencing_ontology.json new file mode 100644 index 0000000..dd9baf8 --- /dev/null +++ b/tests/resources/hca/module/ontology/sequencing_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a process-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Sequencing ontology", + "name": "sequencing_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/sequencing_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a sequencing approach being used.", + "type": "string", + "example": "tag based single cell RNA sequencing; full length single cell RNA sequencing", + "user_friendly": "Sequencing approach" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo"], + "classes": ["OBI:0000070"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "EFO:0008440; EFO:0008441", + "user_friendly": "Sequencing approach ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "tag based single cell RNA sequencing; full length single cell RNA sequencing", + "user_friendly": "Sequencing approach ontology label" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/species_ontology.json b/tests/resources/hca/module/ontology/species_ontology.json new file mode 100644 index 0000000..4aa5084 --- /dev/null +++ b/tests/resources/hca/module/ontology/species_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a species-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Species ontology", + "name": "species_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/species_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of the species to which the organism belongs.", + "type": "string", + "example": "Homo sapiens; Mus musculus", + "user_friendly": "Species" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:NCBITaxon"], + "classes": ["OBI:0100026", "NCBITaxon:2759"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "NCBITaxon:9606; NCBITaxon:10090", + "user_friendly": "Species ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "Homo sapiens; Mus musculus", + "user_friendly": "Species ontology label" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/strain_ontology.json b/tests/resources/hca/module/ontology/strain_ontology.json new file mode 100644 index 0000000..5ea5ff1 --- /dev/null +++ b/tests/resources/hca/module/ontology/strain_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a strain-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Strain ontology", + "name": "strain_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern": "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/strain_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of the strain to which the organism belongs.", + "type": "string", + "example": "C57BL/6; BALB/c", + "user_friendly": "Strain" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:NCBITaxon"], + "classes": ["NCBITaxon:10090"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": true + }, + "example": "EFO:0004472; EFO:0000602", + "user_friendly": "Strain ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "C57BL/6; BALB/c", + "user_friendly": "Strain ontology label" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/ontology/target_pathway_ontology.json b/tests/resources/hca/module/ontology/target_pathway_ontology.json new file mode 100644 index 0000000..b9329b3 --- /dev/null +++ b/tests/resources/hca/module/ontology/target_pathway_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a process-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Target pathway ontology", + "name": "target_pathway_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/target_pathway_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of the treatment target pathway.", + "type": "string", + "user_friendly": "Target pathway", + "example": "positive regulation of memory T cell differentiation" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:hcao"], + "classes": ["GO:0050789"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Target pathway ontology ID", + "example": "GO:0043382" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Target pathway ontology label", + "example": "positive regulation of memory T cell differentiation" + } + } +} diff --git a/tests/resources/hca/module/ontology/time_unit_ontology.json b/tests/resources/hca/module/ontology/time_unit_ontology.json new file mode 100644 index 0000000..4426ca7 --- /dev/null +++ b/tests/resources/hca/module/ontology/time_unit_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a time unit-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Time unit ontology", + "name": "time_unit_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/time_unit_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a time unit being used.", + "type": "string", + "example": "second; week", + "user_friendly": "Time unit" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:uo"], + "classes": ["UO:0000003", "UO:0000149"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "example": "UO:0000010; UO:0000034", + "user_friendly": "Time unit ontology ID" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "example": "second; week", + "user_friendly": "Time unit ontology label" + } + } +} diff --git a/tests/resources/hca/module/ontology/treatment_method_ontology.json b/tests/resources/hca/module/ontology/treatment_method_ontology.json new file mode 100644 index 0000000..35149ac --- /dev/null +++ b/tests/resources/hca/module/ontology/treatment_method_ontology.json @@ -0,0 +1,49 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A term that may be associated with a process-related ontology term.", + "additionalProperties": false, + "required": [ + "text" + ], + "title": "Treatment method ontology", + "name": "treatment_method_ontology", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/ontology/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/treatment_ontology" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "text": { + "description": "The name of a treatment method or approach being used.", + "type": "string", + "user_friendly": "Treatment method", + "example": "T cell activation assay" + }, + "ontology": { + "description": "An ontology term identifier in the form prefix:accession.", + "type": "string", + "graph_restriction": { + "ontologies" : ["obo:efo", "obo:obi"], + "classes": ["OBI:0000070"], + "relations": ["rdfs:subClassOf"], + "direct": false, + "include_self": false + }, + "user_friendly": "Treatment ontology ID", + "example": "EFO:0030037" + }, + "ontology_label": { + "description": "The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field.", + "type": "string", + "user_friendly": "Treatment ontology label", + "example": "T cell activation assay" + } + } +} diff --git a/tests/resources/hca/module/process/purchased_reagents.json b/tests/resources/hca/module/process/purchased_reagents.json new file mode 100644 index 0000000..66fe6d2 --- /dev/null +++ b/tests/resources/hca/module/process/purchased_reagents.json @@ -0,0 +1,59 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information describing purchased kits or reagents used in a protocol.", + "additionalProperties": false, + "title": "Purchased reagents", + "name": "purchased_reagents", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/process/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/purchased_reagents" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "retail_name": { + "description": "The retail name of the kit/reagent.", + "type": "string", + "example": "SureCell WTA 3' Library Prep Kit; CytoTune iPS 2.0 Sendai Reprogramming Kit", + "user_friendly": "Retail name" + }, + "catalog_number": { + "description": "The catalog number of the kit/reagent.", + "type": "string", + "example": "20014279", + "user_friendly": "Catalog number" + }, + "manufacturer": { + "description": "The manufacturer of the kit/reagent.", + "type": "string", + "example": "Illumina; ThermoFisher Scientific", + "user_friendly": "Manufacturer" + }, + "lot_number": { + "description": "The batch or lot number of the kit/reagent.", + "type": "string", + "example": "10001A", + "user_friendly": "Batch/lot number" + }, + "expiry_date": { + "description": "The date of expiration for the kit/reagent.", + "type": "string", + "example": "2018-01-31; 2018-01", + "user_friendly": "Expiry date", + "pattern": "^((19|20)\\d\\d){1}([- \\./][01]\\d){0,1}([- \\./][0-3]\\d){0,1}$", + "guidelines": "Enter the date in date format: yyyy-mm-dd. Supplying partial date is allowed." + }, + "kit_titer": { + "description": "Appropriate titer and volume recommendations found in kit/reagent Certificate of Analysis.", + "type": "string", + "example": "3.0x10^7", + "user_friendly": "Titer" + } + } +} diff --git a/tests/resources/hca/module/process/sequencing/S10x.json b/tests/resources/hca/module/process/sequencing/S10x.json new file mode 100644 index 0000000..9f9bbad --- /dev/null +++ b/tests/resources/hca/module/process/sequencing/S10x.json @@ -0,0 +1,45 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information specific to 10x experiments.", + "additionalProperties": false, + "title": "S10x", + "name": "S10x", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/process/sequencing/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/10x" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "fastq_method": { + "description": "Method used for the generation of fastq files from bcl files.", + "type": "string", + "example": "Cellranger mkfastq; bcl2fastq2", + "user_friendly": "Fastq creation method" + }, + "fastq_method_version": { + "description": "Version of the program used for fastq generation.", + "type": "string", + "example": "Cellranger 2.1.1; v2.20", + "user_friendly": "Fastq creation method version" + }, + "pooled_channels": { + "description": "The number of channels pooled within a sequencing lane.", + "type": "number", + "example": 4, + "user_friendly": "Pooled channels" + }, + "drop_uniformity": { + "description": "Whether drop uniformity was achieved as a result of visual inspection of emulsion after a 10x run.", + "type": "boolean", + "example": "Should be one of: yes, or no.", + "user_friendly": "Drop uniformity" + } + } +} diff --git a/tests/resources/hca/module/process/sequencing/barcode.json b/tests/resources/hca/module/process/sequencing/barcode.json new file mode 100644 index 0000000..f6cbb88 --- /dev/null +++ b/tests/resources/hca/module/process/sequencing/barcode.json @@ -0,0 +1,64 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about barcodes used in a protocol.", + "additionalProperties": false, + "required": [ + "barcode_offset", + "barcode_length", + "barcode_read" + ], + "title": "Barcode", + "name": "barcode", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/process/sequencing/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/barcode" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "barcode_read": { + "description": "The read in which the barcode is found.", + "type": "string", + "enum": [ + "Read 1", + "Read 2", + "Read 3", + "Read 4", + "i7 Index", + "i5 Index" + ], + "user_friendly": "Barcode-containing read", + "example": "Should be one of: Read 1, Read 2, i7 Index, or i5 Index." + }, + "barcode_offset": { + "description": "The 0-based offset of start of barcode in read.", + "type": "integer", + "maximum": 50, + "minimum": 0, + "example": 0, + "user_friendly": "Barcode offset", + "guidelines": "Enter 0 for beginning of read." + }, + "barcode_length": { + "description": "Length of barcode in nucleotides.", + "type": "integer", + "maximum": 50, + "minimum": 0, + "example": 28, + "user_friendly": "Barcode length" + }, + "white_list_file": { + "description": "Name of file containing legitimate barcode sequences.", + "type": "string", + "guidelines": "Unused for randomly generated barcodes.", + "user_friendly": "White list barcode file", + "example": "barcode_whitelist_file.txt" + } + } +} diff --git a/tests/resources/hca/module/process/sequencing/insdc_experiment.json b/tests/resources/hca/module/process/sequencing/insdc_experiment.json new file mode 100644 index 0000000..7bc9189 --- /dev/null +++ b/tests/resources/hca/module/process/sequencing/insdc_experiment.json @@ -0,0 +1,32 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information relating to an INSDC experiment.", + "additionalProperties": false, + "required": [ + "insdc_experiment_accession" + ], + "title": "INSDC experiment", + "name": "insdc_experiment", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/process/sequencing/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/insdc_experiment" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "insdc_experiment_accession": { + "description": "An International Nucleotide Sequence Database Collaboration (INSDC) experiment accession.", + "pattern": "^[D|E|S]RX[0-9]+$", + "type": "string", + "user_friendly": "INSDC experiment accession", + "example": "SRX0000000", + "guidelines": "Enter accession if experiment has been archived. Accession can be from the DDBJ, NCBI, or EMBL-EBI and must start with DRX, SRX, or ERX, respecitvely." + } + } +} diff --git a/tests/resources/hca/module/process/sequencing/plate_based_sequencing.json b/tests/resources/hca/module/process/sequencing/plate_based_sequencing.json new file mode 100644 index 0000000..e91665f --- /dev/null +++ b/tests/resources/hca/module/process/sequencing/plate_based_sequencing.json @@ -0,0 +1,50 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information specific to plate-based sequencing experiments.", + "additionalProperties": false, + "required": [ + "plate_label" + ], + "title": "Plate-based sequencing", + "name": "plate_based_sequencing", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/process/sequencing/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/plate_based_sequencing" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "plate_label": { + "description": "A label or name for the plate on which the well is located.", + "type": "string", + "user_friendly": "Plate label", + "example": "2217", + "guidelines": "Plate label should be unique in the project." + }, + "well_label": { + "description": "A label or name for the well in which the cell is located.", + "type": "string", + "user_friendly": "Well label", + "example": "A1", + "guidelines": "Well label should be unique for the plate." + }, + "well_quality": { + "description": "Quality of well if imaged before sequencing.", + "type": "string", + "enum": [ + "OK", + "control, 2-cell well", + "control, empty well", + "low quality cell" + ], + "user_friendly": "Well quality", + "example": "Should be one of: 'OK', 'control, 2-cell well', 'control, empty well', or 'low quality cell'." + } + } +} diff --git a/tests/resources/hca/module/project/contact.json b/tests/resources/hca/module/project/contact.json new file mode 100644 index 0000000..357a6e8 --- /dev/null +++ b/tests/resources/hca/module/project/contact.json @@ -0,0 +1,90 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about an individual who submitted or contributed to a project.", + "additionalProperties": false, + "required": [ + "name", + "institution" + ], + "title": "Contact", + "name": "contact", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/project/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/contact" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "name": { + "description": "Name of individual who has contributed to the project.", + "type": "string", + "example": "John,D,Doe; Jane,,Smith", + "guidelines": "Enter in the format: first name,middle name or initial,last name.", + "user_friendly": "Contact name" + }, + "email": { + "description": "Email address for the individual.", + "type": "string", + "example": "dummy@email.com", + "format": "email", + "user_friendly": "Email address" + }, + "phone": { + "description": "Phone number of the individual or their lab.", + "type": "string", + "example": "(+1) 234-555-6789", + "guidelines": "Include the country code.", + "user_friendly": "Phone number" + }, + "institution": { + "description": "Name of primary institute where the individual works.", + "type": "string", + "user_friendly": "Institute", + "example": "EMBL-EBI; University of Washington" + }, + "laboratory": { + "description": "Name of lab or department within the institute where the individual works.", + "type": "string", + "user_friendly": "Laboratory/Department", + "example": "Division of Vaccine Discovery; Department of Biology" + }, + "address": { + "description": "Street address where the individual works.", + "type": "string", + "example": "0000 Main Street, Nowheretown, MA, 12091", + "guidelines": "Include street name and number, city, country division, and postal code.", + "user_friendly": "Street address" + }, + "country": { + "description": "Country where the individual works.", + "type": "string", + "user_friendly": "Country", + "example": "USA" + }, + "corresponding_contributor": { + "description": "Whether the individual is a primary point of contact for the project.", + "type": "boolean", + "user_friendly": "Corresponding contributor", + "example": "Should be one of: yes, or no." + }, + "project_role": { + "description": "Primary role of the individual in the project.", + "type": "object", + "$ref": "module/ontology/contributor_role_ontology.json", + "example": "principal investigator; computational scientist", + "user_friendly": "Project role" + }, + "orcid_id": { + "description": "The individual's ORCID ID linked to previous work.", + "type": "string", + "example": "0000-1111-2222-3333", + "user_friendly": "ORCID ID" + } + } +} diff --git a/tests/resources/hca/module/project/funder.json b/tests/resources/hca/module/project/funder.json new file mode 100644 index 0000000..bb09978 --- /dev/null +++ b/tests/resources/hca/module/project/funder.json @@ -0,0 +1,45 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the project funding source.", + "additionalProperties": false, + "required": [ + "grant_id", + "organization" + ], + "title": "Funder", + "name": "funder", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/project/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/funder" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "grant_title": { + "description": "The name of the grant funding the project.", + "type": "string", + "example": "Study of single cells in the human body.", + "user_friendly": "Grant title", + "guidelines": "Enter a title of approximately 30 words." + }, + "grant_id": { + "description": "The unique grant identifier or reference.", + "type": "string", + "example": "BB/P0000001/1", + "user_friendly": "Grant ID" + }, + "organization": { + "description": "The name of the funding organization.", + "type": "string", + "example": "Biotechnology and Biological Sciences Research Council (BBSRC); California Institute of Regenerative Medicine (CIRM)", + "user_friendly": "Funding organization" + } + + } +} diff --git a/tests/resources/hca/module/project/publication.json b/tests/resources/hca/module/project/publication.json new file mode 100644 index 0000000..50f6faa --- /dev/null +++ b/tests/resources/hca/module/project/publication.json @@ -0,0 +1,67 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about a journal article, book, web page, or other external available documentation for a project.", + "additionalProperties": false, + "required": [ + "authors", + "title", + "official_hca_publication" + ], + "title": "Publication", + "name": "publication", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/project/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/publication" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "authors": { + "description": "A list of authors associated with the publication.", + "type": "array", + "example": "Doe JD", + "items": { + "type": "string" + }, + "user_friendly": "Authors", + "guidelines": "List each author in 'surname initials' format." + }, + "title": { + "description": "The title of the publication.", + "type": "string", + "user_friendly": "Publication title", + "example": "Study of single cells in the human body." + }, + "doi": { + "description": "The publication digital object identifier (doi) of the publication.", + "type": "string", + "example": "10.1016/j.cell.2016.07.054", + "user_friendly": "Publication DOI" + }, + "pmid": { + "description": "The PubMed ID of the publication.", + "type": "integer", + "example": "27565351", + "user_friendly": "Publication PMID" + }, + "url": { + "description": "A URL for the publication.", + "type": "string", + "user_friendly": "Publication URL", + "example": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5667944/" + }, + "official_hca_publication": { + "description": "Has the publication been accepted as an official HCA publication, according to the process described in https://www.humancellatlas.org/publications/ ?", + "type": "boolean", + "user_friendly": "Official HCA Publication", + "guidelines": "Should be one of: yes, or no.", + "example": "yes; no" + } + } +} diff --git a/tests/resources/hca/module/protocol/channel.json b/tests/resources/hca/module/protocol/channel.json new file mode 100644 index 0000000..de8bcd7 --- /dev/null +++ b/tests/resources/hca/module/protocol/channel.json @@ -0,0 +1,70 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about a single microscope channel.", + "additionalProperties": false, + "required": [ + "channel_id", + "excitation_wavelength", + "filter_range", + "exposure_time", + "multiplexed" + ], + "title": "Channel", + "name": "channel", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/protocol/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/channel" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "channel_id": { + "description": "User given ID. If there is an accompanying codebook, this name should correspond to the channel id used in the codebook.", + "type": "string", + "example": "1; A", + "user_friendly": "Channel ID" + }, + "excitation_wavelength": { + "description": "Excitation wavelength of the lightsource in nanometers.", + "type": "number", + "example": "640", + "user_friendly": "Excitation wavelength" + }, + "filter_range": { + "description": "Emission filter in nanometers.", + "type": "string", + "example": "461/70", + "user_friendly": "Filter range", + "guidelines": "Enter in CWL/BW format." + }, + "multiplexed": { + "description": "Whether multiple targets were detected simultaneously in this channel.", + "type": "string", + "enum":[ + "yes", + "no" + ], + "example": "Should be one of: yes, or no.", + "user_friendly": "Multiplexed experiment" + }, + "target_fluorophore": { + "description": "The name of the fluorophore this channel is designed to assay.", + "type": "string", + "example": "Alexa 647", + "user_friendly": "Target fluorophore" + }, + "exposure_time": { + "description": "Acquisition time for a single image per channel, in milliseconds.", + "type": "number", + "example": "400", + "user_friendly": "Exposure time", + "guidelines": "Enter value in milliseconds." + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/module/protocol/matrix.json b/tests/resources/hca/module/protocol/matrix.json new file mode 100644 index 0000000..1582be0 --- /dev/null +++ b/tests/resources/hca/module/protocol/matrix.json @@ -0,0 +1,67 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information relating to generation of matrices", + "additionalProperties": false, + "title": "Matrix", + "name": "matrix", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/protocol/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/matrix" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "data_normalization_methods": { + "description": "Method(s) used to normalize data in the matrix", + "type": "array", + "user_friendly": "Data normalization method(s)", + "items": { + "type": "string", + "enum": [ + "CPM (counts per million)", + "TPM (transcripts per kilobase million)", + "RPKM (reads per kilobase of exon per million reads mapped)", + "FPKM (fragments per kilobase of exon per million fragments mapped)", + "DESeq2's median of ratios", + "TMM (EdgeR's trimmed mean of M values)", + "SF (size factor)", + "UQ (Upper quartile)", + "Downsampling", + "other", + "unknown" + ] + }, + "guidelines": "Should be one of: CPM (counts per million), TPM (transcripts per kilobase million), RPKM(reads per kilobase of exon per million reads mapped), FPKM (fragments per kilobase of exon per million fragments mapped), DESeq2’s median of ratios, TMM (EdgeR’s trimmed mean of M values), SF (size factor), UQ (Upper quartile), Downsampling, unknown, other." + }, + "derivation_process": { + "description": "Type of computational tool used in generating the matrix object.", + "type": "array", + "user_friendly": "Derivation process", + "guidelines": "Should be one of: alignment, quantification, peak calling, peak annotation, gene filtering, cell filtering, merging, cell calling, ambient RNA correction, doublet removal, batch correction, depth normalization, other.", + "items": { + "type": "string", + "enum": [ + "alignment", + "quantification", + "peak calling", + "peak annotation", + "gene filtering", + "cell filtering", + "merging", + "cell calling", + "ambient RNA correction", + "doublet removal", + "batch correction", + "depth normalization", + "other" + ] + } + } + } +} diff --git a/tests/resources/hca/module/protocol/probe.json b/tests/resources/hca/module/protocol/probe.json new file mode 100644 index 0000000..e038309 --- /dev/null +++ b/tests/resources/hca/module/protocol/probe.json @@ -0,0 +1,99 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about probes used to detect targets.", + "additionalProperties": false, + "required": [ + "probe_label", + "target_label", + "assay_type" + ], + "title": "Probe", + "name": "probe", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/protocol/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/probe" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "probe_label": { + "description": "The label of a probe used to detect target in this experiment.", + "type": "string", + "example": "ACTA1; cFos", + "user_friendly": "Probe label" + }, + "probe_sequence": { + "pattern": "[ATGCUatgcu]+", + "description": "Sequence of a probe used to detect target.", + "type": "string", + "user_friendly": "Probe sequence", + "guidelines": "Only include transcript-specific hybridization region.", + "example": "AGGCTATAGCGGAGCTACG; aggctatagcggagctacg" + }, + "target_name": { + "description": "The name of the target molecule.", + "type": "string", + "example": "ACTA1_exon1; nuclear cFos", + "user_friendly": "Target name" + }, + "target_codebook_label": { + "description": "A label used in the codebook for the target.", + "type": "string", + "example": "AKT1; CFOS", + "user_friendly": "Target label in codebook", + "guidelines": "Leave blank if experiment did not use codebook." + }, + "target_label": { + "description": "An identifier for the target molecule.", + "type": "string", + "example": "CHEBI:85345; ENSG00000170345", + "user_friendly": "Target label", + "guidelines": "For small molecules this should be from the ChEBI ontology. For gene products this should be a standard gene or gene product identifier from e.g. Ensembl or UniProt." + }, + "subcellular_structure": { + "description": "Target subcellular structure.", + "type": "object", + "$ref": "module/ontology/cellular_component_ontology.json", + "user_friendly": "Target subcellular structure", + "guidelines": "This should be a term from the GO cell component ontology." + }, + "probe_reagents": { + "description": "Name of reagents used to construct the probe.", + "type": "object", + "$ref": "module/process/purchased_reagents.json", + "user_friendly": "Probe construction reagents" + }, + "assay_type": { + "description": "Type of assay used to detect target.", + "type": "object", + "$ref": "module/ontology/process_type_ontology.json", + "example": "MERFISH; in situ sequencing", + "user_friendly": "Assay type" + }, + "fluorophore": { + "description": "Fluorophore used to detect target.", + "type": "array", + "items": { + "type": "string" + }, + "example": "Cy5; Alexa 488", + "user_friendly": "Fluorophore" + }, + "channel_label": { + "description": "Channel label used to assay signal.", + "type": "array", + "items": { + "type": "string" + }, + "example": "1; A", + "user_friendly": "Channel", + "guidelines": "Should be the same as in Channel tab." + } + } +} diff --git a/tests/resources/hca/property_migrations.json b/tests/resources/hca/property_migrations.json new file mode 100644 index 0000000..11d5dac --- /dev/null +++ b/tests/resources/hca/property_migrations.json @@ -0,0 +1,548 @@ +{ + "migrations": [ + { + "source_schema": "file_descriptor", + "property": "schema_major_version", + "effective_from": "2.0.0", + "reason": "Field won't be used", + "type": "deprecated property" + }, + { + "source_schema": "file_descriptor", + "property": "schema_minor_version", + "effective_from": "2.0.0", + "reason": "Field won't be used", + "type": "deprecated property" + }, + { + "source_schema": "analysis_process", + "property": "input_bundles", + "effective_from": "12.0.0", + "reason": "Field not used in DCP2", + "type": "deprecated property" + }, + { + "source_schema": "analysis_process", + "property": "reference_files", + "effective_from": "12.0.0", + "reason": "Linking reference files to analysis process", + "type": "new required property" + }, + { + "source_schema": "analysis_process", + "property": "reference_bundle", + "effective_from": "12.0.0", + "reason": "Field not used in DCP2", + "type": "deprecated property" + }, + { + "source_schema": "cell_suspension", + "property": "total_estimated_cells", + "target_schema": "cell_suspension", + "replaced_by": "estimated_cell_count", + "effective_from": "9.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "library_preparation_protocol", + "property": "library_construction_approach", + "target_schema": "library_preparation_protocol", + "replaced_by": "library_construction_method", + "effective_from": "5.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "sequencing_protocol", + "property": "sequencing_approach", + "target_schema": "sequencing_protocol", + "replaced_by": "method", + "effective_from": "10.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "dissociation_protocol", + "property": "dissociation_method", + "target_schema": "dissociation_protocol", + "replaced_by": "method", + "effective_from": "6.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "dissociation_protocol", + "property": "protocol_reagents", + "target_schema": "dissociation_protocol", + "replaced_by": "reagents", + "effective_from": "6.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "collection_protocol", + "property": "collection_method", + "target_schema": "collection_protocol", + "replaced_by": "method", + "effective_from": "9.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "collection_protocol", + "property": "protocol_reagents", + "target_schema": "collection_protocol", + "replaced_by": "reagents", + "effective_from": "9.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "sequence_file", + "property": "insdc_run", + "target_schema": "sequence_file", + "replaced_by": "insdc_run_accessions", + "effective_from": "8.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "specimen_from_organism", + "property": "state_of_specimen.gross_image", + "target_schema": "specimen_from_organism", + "replaced_by": "state_of_specimen.gross_images", + "effective_from": "8.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "specimen_from_organism", + "property": "state_of_specimen.microscopic_image", + "target_schema": "specimen_from_organism", + "replaced_by": "state_of_specimen.microscopic_images", + "effective_from": "8.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "process", + "property": "insdc_experiment.insdc_experiment", + "target_schema": "process", + "replaced_by": "insdc_experiment.insdc_experiment_accession", + "effective_from": "7.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "analysis_process", + "property": "outputs", + "effective_from": "9.0.0", + "reason": "Field not used and violated metadata entity model", + "type": "deprecated property" + }, + { + "source_schema": "cell_suspension", + "property": "plate_based_sequencing.cell_quality", + "target_schema": "cell_suspension", + "replaced_by": "plate_based_sequencing.well_quality", + "effective_from": "10.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "specimen_from_organism", + "property": "organ_part", + "target_schema": "specimen_from_organism", + "replaced_by": "organ_parts", + "effective_from": "9.0.0", + "reason": "Field change to array", + "type": "renamed property" + }, + { + "source_schema": "cell_suspension", + "property": "plate_based_sequencing.plate_id", + "target_schema": "cell_suspension", + "replaced_by": "plate_based_sequencing.plate_label", + "effective_from": "11.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "cell_suspension", + "property": "plate_based_sequencing.well_id", + "target_schema": "cell_suspension", + "replaced_by": "plate_based_sequencing.well_label", + "effective_from": "11.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "cell_line", + "property": "cell_line_type", + "target_schema": "cell_line", + "replaced_by": "type", + "effective_from": "12.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "project", + "property": "contributors.project_role", + "target_schema": "project", + "replaced_by": "contributors.project_role.text", + "effective_from": "12.0.0", + "reason": "Field standardization", + "type": "moved property" + }, + { + "source_schema": "project", + "property": "publications.publication_title", + "target_schema": "project", + "replaced_by": "publications.title", + "effective_from": "13.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "project", + "property": "publications.publication_url", + "target_schema": "project", + "replaced_by": "publications.url", + "effective_from": "13.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "cell_line", + "property": "publication.publication_title", + "target_schema": "cell_line", + "replaced_by": "publication.title", + "effective_from": "13.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "cell_line", + "property": "publication.publication_url", + "target_schema": "cell_line", + "replaced_by": "publication.url", + "effective_from": "13.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "differentiation_protocol", + "property": "differentiation_method", + "target_schema": "differentiation_protocol", + "replaced_by": "method", + "effective_from": "2.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "cell_line", + "property": "biomaterial_core.biosd_biomaterial", + "target_schema": "cell_line", + "replaced_by": "biomaterial_core.biosamples_accession", + "effective_from": "14.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "cell_line", + "property": "biomaterial_core.insdc_biomaterial", + "target_schema": "cell_line", + "replaced_by": "biomaterial_core.insdc_sample_accession", + "effective_from": "14.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "cell_suspension", + "property": "biomaterial_core.biosd_biomaterial", + "target_schema": "cell_suspension", + "replaced_by": "biomaterial_core.biosamples_accession", + "effective_from": "12.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "cell_suspension", + "property": "biomaterial_core.insdc_biomaterial", + "target_schema": "cell_suspension", + "replaced_by": "biomaterial_core.insdc_sample_accession", + "effective_from": "12.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "donor_organism", + "property": "biomaterial_core.biosd_biomaterial", + "target_schema": "donor_organism", + "replaced_by": "biomaterial_core.biosamples_accession", + "effective_from": "15.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "donor_organism", + "property": "biomaterial_core.insdc_biomaterial", + "target_schema": "donor_organism", + "replaced_by": "biomaterial_core.insdc_sample_accession", + "effective_from": "15.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "imaged_specimen", + "property": "biomaterial_core.biosd_biomaterial", + "target_schema": "imaged_specimen", + "replaced_by": "biomaterial_core.biosamples_accession", + "effective_from": "3.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "imaged_specimen", + "property": "biomaterial_core.insdc_biomaterial", + "target_schema": "imaged_specimen", + "replaced_by": "biomaterial_core.insdc_sample_accession", + "effective_from": "3.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "organoid", + "property": "biomaterial_core.biosd_biomaterial", + "target_schema": "organoid", + "replaced_by": "biomaterial_core.biosamples_accession", + "effective_from": "11.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "organoid", + "property": "biomaterial_core.insdc_biomaterial", + "target_schema": "organoid", + "replaced_by": "biomaterial_core.insdc_sample_accession", + "effective_from": "11.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "specimen_from_organism", + "property": "biomaterial_core.biosd_biomaterial", + "target_schema": "specimen_from_organism", + "replaced_by": "biomaterial_core.biosamples_accession", + "effective_from": "10.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "specimen_from_organism", + "property": "biomaterial_core.insdc_biomaterial", + "target_schema": "specimen_from_organism", + "replaced_by": "biomaterial_core.insdc_sample_accession", + "effective_from": "10.0.0", + "reason": "Field clarification", + "type": "renamed property" + }, + { + "source_schema": "enrichment_protocol", + "property": "enrichment_method", + "target_schema": "enrichment_protocol", + "replaced_by": "method", + "effective_from": "3.0.0", + "reason": "Adherence to style guide", + "type": "renamed property" + }, + { + "source_schema": "enrichment_protocol", + "property": "min_size_selected", + "target_schema": "enrichment_protocol", + "replaced_by": "minimum_size", + "effective_from": "3.0.0", + "reason": "Adherence to style guide", + "type": "renamed property" + }, + { + "source_schema": "enrichment_protocol", + "property": "max_size_selected", + "target_schema": "enrichment_protocol", + "replaced_by": "maximum_size", + "effective_from": "3.0.0", + "reason": "Adherence to style guide", + "type": "renamed property" + }, + { + "source_schema": "process", + "property": "process_core.process_location", + "target_schema": "process", + "replaced_by": "process_core.location", + "effective_from": "8.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "analysis_process", + "property": "process_core.process_location", + "target_schema": "analysis_process", + "replaced_by": "process_core.location", + "effective_from": "10.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "process", + "property": "process_core.operator", + "target_schema": "process", + "replaced_by": "process_core.operators", + "effective_from": "8.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "analysis_process", + "property": "process_core.operator", + "target_schema": "analysis_process", + "replaced_by": "process_core.operators", + "effective_from": "10.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "ipsc_induction_protocol", + "property": "ipsc_induction_method", + "target_schema": "ipsc_induction_protocol", + "replaced_by": "method", + "effective_from": "3.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "ipsc_induction_protocol", + "property": "ipsc_induction_factors", + "target_schema": "ipsc_induction_protocol", + "replaced_by": "reprogramming_factors", + "effective_from": "3.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "ipsc_induction_protocol", + "property": "protocol_reagents", + "target_schema": "ipsc_induction_protocol", + "replaced_by": "reagents", + "effective_from": "3.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "ipsc_induction_protocol", + "property": "ipsc_induction_produced_in_house", + "effective_from": "3.0.0", + "reason": "Redundant with process.location", + "type": "deprecated property" + }, + { + "source_schema": "cell_suspension", + "property": "selected_cell_type", + "target_schema": "cell_suspension", + "replaced_by": "selected_cell_types", + "effective_from": "13.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "analysis_file", + "property": "file_core.file_format", + "target_schema": "analysis_file", + "replaced_by": "file_core.format", + "effective_from": "6.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "image_file", + "property": "file_core.file_format", + "target_schema": "image_file", + "replaced_by": "file_core.format", + "effective_from": "2.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "reference_file", + "property": "file_core.file_format", + "target_schema": "reference_file", + "replaced_by": "file_core.format", + "effective_from": "3.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "sequence_file", + "property": "file_core.file_format", + "target_schema": "sequence_file", + "replaced_by": "file_core.format", + "effective_from": "9.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "supplementary_file", + "property": "file_core.file_format", + "target_schema": "supplementary_file", + "replaced_by": "file_core.format", + "effective_from": "2.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "project", + "property": "contributors.contact_name", + "target_schema": "project", + "replaced_by": "contributors.name", + "effective_from": "14.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "process", + "property": "process_type", + "target_schema": "process", + "replaced_by": "type", + "effective_from": "9.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "analysis_process", + "property": "process_type", + "target_schema": "analysis_process", + "replaced_by": "type", + "effective_from": "11.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "protocol", + "property": "protocol_type", + "target_schema": "protocol", + "replaced_by": "type", + "effective_from": "7.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + }, + { + "source_schema": "analysis_protocol", + "property": "protocol_type", + "target_schema": "analysis_protocol", + "replaced_by": "type", + "effective_from": "9.0.0", + "reason": "Schema consistency update", + "type": "renamed property" + } + ] +} \ No newline at end of file diff --git a/tests/resources/hca/system/file_descriptor.json b/tests/resources/hca/system/file_descriptor.json new file mode 100644 index 0000000..6d62f3d --- /dev/null +++ b/tests/resources/hca/system/file_descriptor.json @@ -0,0 +1,99 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Checksums and other information for asserting the integrity of a data file.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "content_type", + "size", + "sha256", + "crc32c", + "file_id", + "file_version", + "file_name" + ], + "title": "File descriptor", + "name": "file_descriptor", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^https?://schema.(.*)?humancellatlas.org/system/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/file_descriptor$" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}\\.[0-9]{1,}\\.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "file_descriptor" + ] + }, + "file_name": { + "description": "The object name of the data file relative to the staging area's `data/` directory", + "type": "string", + "user_friendly": "Staging file name", + "example": "1b6d8348-d6e9-406a-aa6a-7ee886e52bf9/IDC9_L004_R2.fastq.gz" + }, + "file_id": { + "description": "UUID that uniquely identifies each data file in its source", + "type": "string", + "user_friendly": "File UUID", + "example": "111f222a-333b-444c-555d-eee63ddfccc7", + "pattern": "^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$" + }, + "file_version": { + "description": "The version of the file given in date time format", + "type": "string", + "user_friendly": "File version", + "example": "2020-05-01T04:26:07.021870Z", + "pattern": "^[0-9]{4}-[0-9]{2}-[0-9]{2}T[0-9]{2}:[0-9]{2}:[0-9]{2}\\.[0-9]{6}Z$" + }, + "content_type": { + "description": "An appropriate MIME type for this file.", + "type": "string", + "user_friendly": "Content type", + "example": "application/gzip" + }, + "size": { + "description": "The size of the file in bytes.", + "type": "integer", + "minimum": 0, + "user_friendly": "Size", + "example": 2147483648 + }, + "sha256": { + "description": "The SHA-256 hash of the file.", + "type": "string", + "pattern": "^[a-f0-9]{64}$", + "user_friendly": "SHA-256", + "example": "12998c017066eb0d2a70b94e6ed3192985855ce390f321bbdb832022888bd251" + }, + "crc32c": { + "description": "The CRC-32C code generated for this file.", + "type": "string", + "pattern": "^[a-f0-9]{8}$", + "user_friendly": "CRC32C", + "example": "0b83b575" + }, + "sha1": { + "description": "The SHA-1 hash of the file.", + "type": "string", + "pattern": "^[a-f0-9]{40}$", + "user_friendly": "SHA-1", + "example": "6e71b3cac15d32fe2d36c270887df9479c25c640" + }, + "s3_etag" : { + "description": "An AWS S3 ETag of this file", + "user_friendly": "S3 ETag", + "type": "string", + "example": "c92e5374ac0a53b228d4c1511c2d2842-63" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/system/license.json b/tests/resources/hca/system/license.json new file mode 100644 index 0000000..a957c50 --- /dev/null +++ b/tests/resources/hca/system/license.json @@ -0,0 +1,39 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the project license.", + "additionalProperties": false, + "title": "License", + "name": "license", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/system/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/license" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "identifier": { + "type": "string", + "description": "Identifier of the license under which this dataset is made available.", + "example": "CC-BY", + "user_friendly": "License identifier" + }, + "full_name": { + "type": "string", + "description": "Full name of the license under which this dataset is made available.", + "example": "Attribution 4.0 International (CC BY 4.0)", + "user_friendly": "License description" + }, + "url": { + "type": "string", + "description": "URL of the license under which this data is available.", + "example": "https://creativecommons.org/licenses/by/4.0/", + "user_friendly": "License URL" + } + } +} diff --git a/tests/resources/hca/system/links.json b/tests/resources/hca/system/links.json new file mode 100644 index 0000000..712a729 --- /dev/null +++ b/tests/resources/hca/system/links.json @@ -0,0 +1,270 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A schema for describing the links between entities in an experiment graph.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "links" + ], + "title": "Links", + "name": "links", + "type": "object", + "definitions": { + "input": { + "type": "object", + "description": "An input to a process", + "additionalProperties": false, + "required": [ + "input_type", + "input_id" + ], + "properties": { + "input_type": { + "description": "The concrete type of the input entity.", + "example": "cell_suspension", + "user_friendly": "Input type", + "type": "string" + }, + "input_id": { + "description": "UUID of the input entity.", + "example": "111f222a-333b-444c-555d-eee63ddfccc7", + "user_friendly": "Input entity UUID", + "type": "string", + "pattern": "^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$" + } + } + }, + "output": { + "type": "object", + "description": "An output from a process", + "additionalProperties": false, + "required": [ + "output_type", + "output_id" + ], + "properties": { + "output_type": { + "description": "The concrete type of the output entity.", + "example": "sequence_file", + "user_friendly": "Output type", + "type": "string" + }, + "output_id": { + "description": "UUID of the output entity.", + "example": "111f222a-333b-444c-555d-eee63ddfccc7", + "user_friendly": "Output entity UUID", + "type": "string", + "pattern": "^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$" + } + } + }, + "protocol_reference": { + "type": "object", + "description": "A protocol used in a process", + "additionalProperties": false, + "required": [ + "protocol_type", + "protocol_id" + ], + "properties": { + "protocol_type": { + "description": "The concrete type of protocol entity.", + "example": "enrichment_protocol", + "user_friendly": "Protocol type", + "type": "string", + "enum": [ + "analysis_protocol", + "aggregate_generation_protocol", + "collection_protocol", + "differentiation_protocol", + "dissociation_protocol", + "enrichment_protocol", + "ipsc_induction_protocol", + "imaging_preparation_protocol", + "imaging_protocol", + "library_preparation_protocol", + "sequencing_protocol", + "treatment_protocol" + ] + }, + "protocol_id": { + "description": "UUID of the protocol entity.", + "example": "111f222a-333b-444c-555d-eee63ddfccc7", + "user_friendly": "Protocol entity UUID", + "type": "string", + "pattern": "^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$" + } + } + }, + "process_link": { + "type": "object", + "additionalProperties": false, + "required": [ + "process_type", + "process_id", + "inputs", + "outputs", + "protocols", + "link_type" + ], + "properties": { + "process_type": { + "description": "The concrete type of the process described by this link.", + "example": "analysis", + "user_friendly": "Process type", + "type": "string" + }, + "process_id": { + "description": "UUID of the process described by this link.", + "example": "111f222a-333b-444c-555d-eee63ddfccc7", + "user_friendly": "Process entity UUID", + "type": "string", + "pattern": "^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$" + }, + "inputs": { + "description": "An array of inputs for this link", + "type": "array", + "items": { + "type": "object", + "$ref": "system/links.json#/definitions/input" + } + }, + "outputs": { + "description": "An array of outputs for this link.", + "type": "array", + "items": { + "type": "object", + "$ref": "system/links.json#/definitions/output" + } + }, + "protocols": { + "description": "An array of protocols for this link.", + "type": "array", + "items": { + "type": "object", + "$ref": "system/links.json#/definitions/protocol_reference" + } + }, + "link_type": { + "description": "The type of this link.", + "type": "string", + "enum": [ + "process_link" + ] + } + } + }, + "supplementary_file_reference": { + "type": "object", + "required": [ + "file_id", + "file_type" + ], + "additionalProperties": false, + "properties": { + "file_id": { + "description": "ID for this supplementary file entity", + "example": "111f222a-333b-444c-555d-eee63ddfccc7", + "type": "string", + "pattern": "^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$" + }, + "file_type": { + "description": "concrete type of this supplementary file entity", + "type": "string", + "enum": [ + "supplementary_file" + ] + } + } + }, + "entity": { + "type": "object", + "required": [ + "entity_id", + "entity_type" + ], + "additionalProperties": false, + "properties": { + "entity_id": { + "description": "ID of this entity", + "example": "111f222a-333b-444c-555d-eee63ddfccc7", + "type": "string", + "pattern": "^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$" + }, + "entity_type": { + "description": "The concrete type of this entity", + "type": "string", + "enum": [ + "project" + ] + } + } + }, + "supplementary_file_link": { + "type": "object", + "required": [ + "entity", + "files", + "link_type" + ], + "additionalProperties": false, + "properties": { + "entity": { + "description": "An entity that refers to this supplementary file", + "type": "object", + "$ref": "system/links.json#/definitions/entity" + }, + "files": { + "description": "An array of supplementary files", + "type": "array", + "items": { + "type": "object", + "$ref": "system/links.json#/definitions/supplementary_file_reference" + } + }, + "link_type": { + "description": "The type of this link.", + "type": "string", + "enum": [ + "supplementary_file_link" + ] + } + } + } + }, + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern": "^(http|https)://schema.(.*?)humancellatlas.org/system/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/links" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "links" + ] + }, + "links": { + "description": "An array of linking objects.", + "type": "array", + "items": { + "type": "object", + "oneOf": [ + { + "$ref": "system/links.json#/definitions/process_link" + }, + { + "$ref": "system/links.json#/definitions/supplementary_file_link" + } + ] + } + } + } +} diff --git a/tests/resources/hca/system/provenance.json b/tests/resources/hca/system/provenance.json new file mode 100644 index 0000000..298ddb6 --- /dev/null +++ b/tests/resources/hca/system/provenance.json @@ -0,0 +1,74 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Provenance information added or generated at time of ingest." , + "additionalProperties": false, + "required": [ + "document_id", + "submission_date" + ], + "title": "Provenance", + "name": "provenance", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/system/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/provenance" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_major_version": { + "description": "The major version number of the schema.", + "type": "integer", + "pattern": "^[0-9]{1,}$", + "user_friendly": "Schema major version", + "example": "4; 10" + }, + "schema_minor_version": { + "description": "The minor version number of the schema.", + "type": "integer", + "pattern": "^[0-9]{1,}$", + "user_friendly": "Schema minor version", + "example": "6; 15" + }, + "submission_date": { + "description": "When project was first submitted to database.", + "type": "string", + "format": "date-time", + "user_friendly": "Submission date" + }, + "submitter_id": { + "description": "ID of individual who first submitted project.", + "type": "string", + "user_friendly": "Submitter ID" + }, + "update_date": { + "description": "When project was last updated.", + "type": "string", + "format": "date-time", + "user_friendly": "Update date" + }, + "updater_id": { + "description": "ID of individual who last updated project.", + "type": "string", + "user_friendly": "Updater ID" + }, + "document_id": { + "description": "Identifier for document.", + "type": "string", + "pattern": ".{8}-.{4}-.{4}-.{4}-.{12}", + "comment": "This structure supports the current ingest API. It may change in the future.", + "user_friendly": "Document ID" + }, + "accession": { + "description": "A unique accession for this entity, provided by the broker.", + "type": "string", + "user_friendly": "Accession" + } + + } +} \ No newline at end of file diff --git a/tests/resources/hca/type/biomaterial/cell_line.json b/tests/resources/hca/type/biomaterial/cell_line.json new file mode 100644 index 0000000..ddc08a5 --- /dev/null +++ b/tests/resources/hca/type/biomaterial/cell_line.json @@ -0,0 +1,166 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the cell line or cell culture biomaterial.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "biomaterial_core", + "type", + "model_organ" + ], + "title": "Cell line", + "name": "cell_line", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/cell_line" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "biomaterial" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "biomaterial_core" : { + "description": "Core biomaterial-level information.", + "type": "object", + "$ref": "core/biomaterial/biomaterial_core.json", + "user_friendly": "Biomaterial core" + }, + "supplier": { + "description": "The supplier of the cell line.", + "type": "string", + "example": "HipSci; ATCC", + "user_friendly": "Supplier" + }, + "catalog_number": { + "description": "The supplier catalogue number for the cell line.", + "type": "string", + "example": "77650057", + "user_friendly": "Catalog number" + }, + "lot_number": { + "description": "The supplier lot or batch number for the cell line.", + "type": "string", + "example": "24.10.14", + "user_friendly": "Lot/batch number" + }, + "catalog_url": { + "description": "The supplier catalogue URL for the cell line.", + "type": "string", + "user_friendly": "Catalog URL", + "example": "www.phe-culturecollections.org.uk/products/celllines/ipsc/detail.jsp?refId=77650057&collection=ecacc_ipsc" + }, + "cell_cycle": { + "description": "The cell cycle phase if the cell line is synchronized growing cells or the phase is known.", + "type": "object", + "$ref": "module/ontology/cell_cycle_ontology.json", + "user_friendly": "Cell cycle" + }, + "type": { + "description": "The type of cell line.", + "type": "string", + "enum": [ + "primary", + "immortalized", + "stem cell", + "stem cell-derived", + "induced pluripotent", + "synthetic" + ], + "example": "Should be one of: primary, immortalized, stem cell, stem cell-derived, induced pluripotent, or synthetic.", + "user_friendly": "Cell line type" + }, + "model_organ": { + "description": "Organ for which this cell line is a model.", + "type": "object", + "$ref": "module/ontology/organ_ontology.json", + "user_friendly": "Organ model" + }, + "cell_morphology": { + "description": "Features relating to the morphology of the cells.", + "type": "object", + "$ref": "module/biomaterial/cell_morphology.json", + "user_friendly": "Cell morphology" + }, + "growth_conditions": { + "description": "Features relating to the growth and/or maintenance of the cell lines.", + "type": "object", + "$ref": "module/biomaterial/growth_conditions.json", + "user_friendly": "Growth conditions" + }, + "confluency": { + "description": "The percent a plate surface is covered by cells.", + "type": "number", + "example": 60, + "user_friendly": "Percent confluency" + }, + "cell_type": { + "description": "The cell type that the cell line represents.", + "type": "object", + "$ref": "module/ontology/cell_type_ontology.json", + "user_friendly": "Cell type" + }, + "karyotype": { + "description": "The karyotype of the cell line.", + "type": "string", + "user_friendly": "Karyotype", + "example": "sex chromosome complement of XY; del(2) (q11)" + }, + "tissue": { + "description": "The tissue that the cell line was derived from.", + "type": "object", + "$ref": "module/ontology/organ_part_ontology.json", + "user_friendly": "Tissue" + }, + "date_established": { + "description": "Date when the cell line was established.", + "type": "string", + "pattern": "^((19|20)\\d\\d){1}([- \\./][01]\\d){0,1}([- \\./][0-3]\\d){0,1}$", + "user_friendly": "Date established", + "example": "2017-03-19; 2002/03; 1995", + "guidelines": "Enter the date established in date format: yyyy-mm-dd. Supplying partial date is allowed." + }, + "disease": { + "description": "Short description of any disease association to the cell type.", + "type": "object", + "$ref": "module/ontology/disease_ontology.json", + "user_friendly": "Disease" + }, + "genus_species": { + "description": "The scientific binomial name for the species of the cell line.", + "type" : "array", + "items":{ + "$ref": "module/ontology/species_ontology.json" + }, + "user_friendly": "Genus species" + }, + "publication": { + "description": "A publication that cites the cell line creation.", + "type": "object", + "$ref": "module/project/publication.json", + "user_friendly": "Publication" + }, + "timecourse": { + "description": "Information relating to a timecourse associated with this cell line.", + "type": "object", + "$ref": "module/biomaterial/timecourse.json", + "user_friendly": "Timecourse" + } + } +} diff --git a/tests/resources/hca/type/biomaterial/cell_suspension.json b/tests/resources/hca/type/biomaterial/cell_suspension.json new file mode 100644 index 0000000..1c4a8e0 --- /dev/null +++ b/tests/resources/hca/type/biomaterial/cell_suspension.json @@ -0,0 +1,94 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the suspension of cells or nuclei derived from the collected or cultured specimen.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "biomaterial_core" + ], + "title": "Cell suspension", + "name": "cell_suspension", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/cell_suspension" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "biomaterial" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "biomaterial_core" : { + "description": "Core biomaterial-level information.", + "type": "object", + "$ref": "core/biomaterial/biomaterial_core.json", + "user_friendly": "Biomaterial core" + }, + "cell_morphology": { + "description": "Features relating to the morphology of cells in a biomaterial.", + "type": "object", + "$ref": "module/biomaterial/cell_morphology.json", + "user_friendly": "Cell morphology" + }, + "growth_conditions": { + "description": "Features relating to the growth and/or maintenance of a biomaterial.", + "type": "object", + "$ref": "module/biomaterial/growth_conditions.json", + "user_friendly": "Growth conditions" + }, + "genus_species": { + "description": "The scientific binomial name for the species of the suspension.", + "type" : "array", + "items":{ + "$ref": "module/ontology/species_ontology.json" + }, + "user_friendly": "Genus species" + }, + "selected_cell_types": { + "description" : "The cell type(s) selected to be present in the suspension.", + "type": "array", + "items": { + "$ref": "module/ontology/cell_type_ontology.json" + }, + "user_friendly": "Selected cell type(s)", + "guidelines": "Enter the cell type(s) selected for, not the cell type(s) determined to be present post-analysis." + }, + "estimated_cell_count": { + "description": "Estimated number of cells in the suspension.", + "type": "integer", + "maximum": 1000000000, + "minimum": 0, + "example": "1; 2100", + "user_friendly": "Estimated cell count", + "guidelines": "Enter 1 for well-based assays." + }, + "plate_based_sequencing" : { + "description": "Fields specific for plate-based sequencing experiments.", + "type": "object", + "$ref": "module/process/sequencing/plate_based_sequencing.json", + "user_friendly": "Plate-based sequencing" + }, + "timecourse": { + "description": "Information relating to a timecourse associated with this cell suspension.", + "type": "object", + "$ref": "module/biomaterial/timecourse.json", + "user_friendly": "Timecourse" + } + } +} diff --git a/tests/resources/hca/type/biomaterial/donor_organism.json b/tests/resources/hca/type/biomaterial/donor_organism.json new file mode 100644 index 0000000..ade0737 --- /dev/null +++ b/tests/resources/hca/type/biomaterial/donor_organism.json @@ -0,0 +1,189 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the donor from which a specimen was collected.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "biomaterial_core", + "is_living", + "sex", + "development_stage" + ], + "title": "Donor organism", + "name": "donor_organism", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/donor_organism" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "biomaterial" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "biomaterial_core" : { + "description": "Core biomaterial-level information.", + "type": "object", + "$ref": "core/biomaterial/biomaterial_core.json", + "user_friendly": "Biomaterial core" + }, + "human_specific": { + "description": "Fields specific to human (homo sapiens) organisms.", + "type": "object", + "$ref": "module/biomaterial/human_specific.json", + "user_friendly": "Human-specific" + }, + "mouse_specific": { + "description": "Fields specific to mouse (mus musculus) organisms.", + "type": "object", + "$ref": "module/biomaterial/mouse_specific.json", + "user_friendly": "Mouse-specific" + }, + "genus_species": { + "description": "The scientific binomial name for the species of the organism.", + "type" : "array", + "items":{ + "$ref": "module/ontology/species_ontology.json" + }, + "user_friendly": "Genus species" + }, + "sex": { + "description": "The biological sex of the organism.", + "type": "string", + "enum": [ + "female", + "male", + "mixed", + "unknown" + ], + "user_friendly": "Biological sex", + "example": "Should be one of: male, female, mixed, or unknown." + }, + "is_living": { + "description": "Whether organism was alive at time of biomaterial collection.", + "type": "string", + "enum": [ + "yes", + "no", + "unknown", + "not applicable" + ], + "user_friendly": "Alive at collection", + "example": "Should be one of: yes, no, not applicable, or unknown.", + "guidelines": "Enter yes if organism was alive at time of biomaterial collection, no if organism was dead, unknown if not known, and not applicable for ex vivo embryo." + }, + "organism_age": { + "description": "Age of organism in Age units measured since birth.", + "pattern": "^[0-9]+\\.?[0-9]*-?[0-9]*\\.?[0-9]*$", + "type": "string", + "user_friendly": "Age", + "example": "20; 45-65", + "guidelines": "Enter either a single value or a range of values. Indicate a range using a hyphen." + }, + "organism_age_unit": { + "description": "The unit in which Age is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Age unit" + }, + "development_stage": { + "description": "A classification of the developmental stage of the organism.", + "type": "object", + "$ref": "module/ontology/development_stage_ontology.json", + "user_friendly": "Development stage" + }, + "diseases": { + "description": "Short description of known disease(s) of the organism.", + "type": "array", + "items": { + "$ref": "module/ontology/disease_ontology.json" + }, + "user_friendly": "Known disease(s)", + "guidelines": "Enter 'normal' if no known disease." + }, + "death": { + "description": "Information about conditions of death of the organism.", + "type": "object", + "$ref": "module/biomaterial/death.json", + "user_friendly": "Death conditions" + }, + "familial_relationships": { + "description": "Information about other organisms related to this organism.", + "type": "array", + "items": { + "$ref": "module/biomaterial/familial_relationship.json" + }, + "user_friendly": "Familial relationship" + }, + "medical_history": { + "description": "Information about the medical history of the organism.", + "type": "object", + "$ref": "module/biomaterial/medical_history.json", + "user_friendly": "Medical history" + }, + "gestational_age": { + "description": "Gestational age of pregnancy in Gestational age units measured from the last menstrual period.", + "pattern": "^[0-9]+\\.?[0-9]*-?[0-9]*\\.?[0-9]*$", + "type": "string", + "user_friendly": "Gestational age", + "example": "22; 8-9", + "guidelines": "To calculate, add 2 weeks to embryonic post-ovulation age. Enter either a single value or indicate a range of values using a hyphen." + }, + "gestational_age_unit": { + "description": "The unit in which Gestational age is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Gestational age unit" + }, + "height": { + "description": "Height of organism in Height unit.", + "pattern": "^[0-9]+\\.?[0-9]*-?[0-9]*\\.?[0-9]*$", + "type": "string", + "user_friendly": "Height", + "example": "160; 120-140", + "guidelines": "Enter either a single value or a range of values. Indicate a range using a hyphen." + }, + "height_unit": { + "description": "The unit in which Height is expressed.", + "type": "object", + "$ref": "module/ontology/length_unit_ontology.json", + "user_friendly": "Height unit" + }, + "weight": { + "description": "Weight of organism in Weight unit.", + "pattern": "^[0-9]+\\.?[0-9]*-?[0-9]*\\.?[0-9]*$", + "type": "string", + "user_friendly": "Weight", + "example": "60; 40-60", + "guidelines": "Enter either a single value or a range of values. Indicate a range using a hyphen." + }, + "weight_unit": { + "description": "The unit in which Weight is expressed.", + "type": "object", + "$ref": "module/ontology/mass_unit_ontology.json", + "user_friendly": "Weight unit" + }, + "timecourse": { + "description": "Information relating to a timecourse associated with this biomaterial.", + "type": "object", + "$ref": "module/biomaterial/timecourse.json", + "user_friendly": "Timecourse" + } + } +} diff --git a/tests/resources/hca/type/biomaterial/imaged_specimen.json b/tests/resources/hca/type/biomaterial/imaged_specimen.json new file mode 100644 index 0000000..b0b6d2b --- /dev/null +++ b/tests/resources/hca/type/biomaterial/imaged_specimen.json @@ -0,0 +1,70 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about a tissue specimen after it has been sectioned and prepared for imaging.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "biomaterial_core", + "slice_thickness" + ], + "title": "Imaged specimen", + "name": "imaged_specimen", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/imaged_specimen" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "biomaterial" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "biomaterial_core" : { + "description": "Core biomaterial-level information.", + "type": "object", + "$ref": "core/biomaterial/biomaterial_core.json", + "user_friendly": "Biomaterial core" + }, + "overview_images": { + "description": "List of filenames of photographs of specimen.", + "type": "array", + "items": { + "pattern": "^.*.jpg$|^.*.jpeg$|^.*.tiff$|^.*.png$", + "type": "string" + }, + "user_friendly": "Gross image", + "example": "my_image_file.jpg; overview_image.tiff", + "guidelines": "Must be of format JPEG, TIFF, or PNG." + }, + "slice_thickness": { + "description": "Thickness of the imaged slice in micrometres.", + "type" : "number", + "example": "14", + "user_friendly": "Imaged slice thickness" + }, + "internal_anatomical_structures": { + "description": "Internal (landmark) structures visible in the overview image that are informative about the broader anatomical context/location of the sample.", + "type": "array", + "items": { + "$ref": "module/ontology/organ_part_ontology.json" + }, + "user_friendly": "Internal tissue structures" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/type/biomaterial/organoid.json b/tests/resources/hca/type/biomaterial/organoid.json new file mode 100644 index 0000000..b50a8d1 --- /dev/null +++ b/tests/resources/hca/type/biomaterial/organoid.json @@ -0,0 +1,119 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about an organoid biomaterial.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "biomaterial_core", + "model_organ" + ], + "title": "Organoid", + "name": "organoid", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/organoid" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "biomaterial" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "biomaterial_core" : { + "description": "Core biomaterial-level information.", + "type": "object", + "$ref": "core/biomaterial/biomaterial_core.json", + "user_friendly": "Biomaterial core" + }, + "genus_species": { + "description": "The scientific binomial name for the species of the organoid.", + "type" : "array", + "items":{ + "$ref": "module/ontology/species_ontology.json" + }, + "user_friendly": "Genus species" + }, + "model_organ": { + "description": "Organ for which this organoid is a model system.", + "type": "object", + "$ref": "module/ontology/organ_ontology.json", + "user_friendly": "Organ model" + }, + "model_organ_part": { + "description": "Organ part for which this organoid is a model system.", + "type": "object", + "$ref": "module/ontology/organ_part_ontology.json", + "user_friendly": "Organ part model" + }, + "age": { + "description": "Age of the organoid in Organoid age unit measured from when cell aggregates started differentiating to desired organoid model.", + "type": "number", + "example": 55, + "user_friendly": "Organoid age" + }, + "age_unit": { + "description": "The unit in which Organoid age is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Organoid age unit" + }, + "size": { + "description": "Size of the organoid in Organoid size unit.", + "type": "number", + "example": 4, + "user_friendly": "Organoid size" + }, + "size_unit": { + "description": "The unit in which the Organoid size is expressed.", + "type": "object", + "$ref": "module/ontology/length_unit_ontology.json", + "user_friendly": "Organoid size unit" + }, + "morphology": { + "description": "General description of the organoid morphology.", + "type": "string", + "example": "Epithelial monolayer with budding crypt-like domains; Optic cup structure", + "user_friendly": "Organoid morphology" + }, + "embedded_in_matrigel": { + "description": "Whether the organoid is embedded in a matrigel.", + "type": "boolean", + "example": "Should be one of: yes, no.", + "user_friendly": "Embeddded in matrigel" + }, + "growth_environment": { + "description": "Growth environment in which the organoid is grown.", + "type": "string", + "example": "matrigel; liquid suspension; adherent", + "user_friendly": "Growth environment" + }, + "input_aggregate_cell_count": { + "description": "Estimated number of cells per input cell aggregate.", + "type": "number", + "example": 10000, + "user_friendly": "Input aggregate cell count" + }, + "stored_oxygen_levels": { + "description": "Percent oxygen level organoid was stored in prior to sequencing.", + "type": "number", + "example": 75, + "user_friendly": "Stored oxygen level" + } + } +} diff --git a/tests/resources/hca/type/biomaterial/specimen_from_organism.json b/tests/resources/hca/type/biomaterial/specimen_from_organism.json new file mode 100644 index 0000000..b5c6420 --- /dev/null +++ b/tests/resources/hca/type/biomaterial/specimen_from_organism.json @@ -0,0 +1,111 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the specimen that was collected from the donor organism.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "biomaterial_core", + "organ" + ], + "title": "Specimen from organism", + "name": "specimen_from_organism", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/specimen_from_organism" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "biomaterial" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "biomaterial_core" : { + "description": "Core biomaterial-level information.", + "type": "object", + "$ref": "core/biomaterial/biomaterial_core.json", + "user_friendly": "Biomaterial core" + }, + "genus_species": { + "description": "The scientific binomial name for the species of the specimen.", + "type" : "array", + "items":{ + "$ref": "module/ontology/species_ontology.json" + }, + "user_friendly": "Genus species" + }, + "organ": { + "description": "The organ that the biomaterial came from.", + "type": "object", + "$ref": "module/ontology/organ_ontology.json", + "guidelines": "Blood and connective tissue are considered organs.", + "user_friendly": "Organ" + }, + "organ_parts": { + "description": "A term for a specific part of the organ that the biomaterial came from.", + "type": "array", + "items": { + "$ref": "module/ontology/organ_part_ontology.json" + }, + "guidelines": "The term organ part is very broadly defined here.", + "user_friendly": "Organ part" + }, + "diseases": { + "description": "Short description of known disease(s) of the specimen.", + "type": "array", + "items": { + "$ref": "module/ontology/disease_ontology.json" + }, + "user_friendly": "Known disease(s)", + "guidelines": "Enter normal if no known diseases." + }, + "state_of_specimen": { + "description": "State of the specimen at the time of collection.", + "type": "object", + "$ref": "module/biomaterial/state_of_specimen.json", + "user_friendly": "State of specimen" + }, + "preservation_storage": { + "description": "Information about how a specimen was preserved and/or stored over a period of time.", + "type": "object", + "$ref": "module/biomaterial/preservation_storage.json", + "user_friendly": "Preservation/Storage" + }, + "collection_time": { + "description": "When the biomaterial was collected.", + "type": "string", + "user_friendly": "Time of collection", + "example": "2016-01-21T00:00:00Z; 2016-03", + "guidelines": "Enter the time in date-time format: yyyy-mm-ddThh:mm:ssZ. Supplying partial date is allowed.", + "oneOf": [ + { + "format": "date-time" + }, + { + "pattern": "^((19|20)\\d\\d){1}([- \\./][01]\\d){0,1}([- \\./][0-3]\\d){0,1}$" + } + ] + }, + "purchased_specimen": { + "description": "Information about a purchased specimen.", + "type": "object", + "$ref": "module/process/purchased_reagents.json", + "user_friendly": "Purchased specimen" + } + } +} diff --git a/tests/resources/hca/type/file/analysis_file.json b/tests/resources/hca/type/file/analysis_file.json new file mode 100644 index 0000000..5cdfc93 --- /dev/null +++ b/tests/resources/hca/type/file/analysis_file.json @@ -0,0 +1,53 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A file analysis results produced by a secondary analysis pipeline.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "file_core" + ], + "title": "Analysis file", + "name": "analysis_file", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern": "^(http|https)://schema.(.*?)humancellatlas.org/type/file/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/analysis_file" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "file" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "file_core" : { + "description": "Core file-level information.", + "type": "object", + "$ref": "core/file/file_core.json", + "user_friendly": "File core" + }, + "matrix_cell_count": { + "description": "Number of cells analyzed in a matrix file.", + "type": "integer", + "maximum": 1000000000, + "minimum": 0, + "example": "1; 2100", + "user_friendly": "Matrix cell count", + "guidelines": "If the analysis file is a matrix containing cells, enter the exact number of cells in the matrix." + } + } +} diff --git a/tests/resources/hca/type/file/image_file.json b/tests/resources/hca/type/file/image_file.json new file mode 100644 index 0000000..0d90ffa --- /dev/null +++ b/tests/resources/hca/type/file/image_file.json @@ -0,0 +1,44 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about an image file generated by an imaging experiment.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "file_core" + ], + "title": "Image file", + "name": "image_file", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern": "^(http|https)://schema.(.*?)humancellatlas.org/type/file/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/image_file" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "file" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "file_core" : { + "description": "Core file-level information.", + "type": "object", + "$ref": "core/file/file_core.json", + "user_friendly": "File core" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/type/file/reference_file.json b/tests/resources/hca/type/file/reference_file.json new file mode 100644 index 0000000..1e6da4f --- /dev/null +++ b/tests/resources/hca/type/file/reference_file.json @@ -0,0 +1,92 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A reference file used by a secondary reference pipeline.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "file_core", + "ncbi_taxon_id", + "genus_species", + "assembly_type", + "reference_type", + "reference_version" + ], + "title": "Reference file", + "name": "reference_file", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern": "^(http|https)://schema.(.*?)humancellatlas.org/type/file/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/reference_file" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "file" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "file_core" : { + "description": "Core file-level information.", + "type": "object", + "$ref": "core/file/file_core.json", + "user_friendly": "File core" + }, + "ncbi_taxon_id" : { + "description": "A taxonomy ID (taxonID) from NCBI.", + "type": "integer", + "user_friendly": "NCBI taxon ID", + "example": "9606; 10090", + "guidelines": "NCBI taxonIDs can be looked up at https://www.ncbi.nlm.nih.gov/taxonomy." + }, + "genus_species": { + "description": "The scientific binomial name for the species of this reference.", + "type": "object", + "$ref": "module/ontology/species_ontology.json", + "user_friendly": "Genus species" + }, + "reference_type": { + "description": "The type of the reference file.", + "type": "string", + "enum": [ + "genome sequence", + "transcriptome sequence", + "annotation reference", + "transcriptome index", + "genome sequence index" + ], + "user_friendly": "Reference type", + "example": "Should be one of: genome sequence, transcriptome sequence, annotation reference, transcriptome index, or genome sequence index." + }, + "assembly_type": { + "description": "The assembly type of the genome reference file.", + "type": "string", + "enum": [ + "primary assembly", + "complete assembly", + "patch assembly" + ], + "user_friendly": "Genome assembly type", + "example": "Should be one of: primary assembly, complete assembly, or patch assembly." + }, + "reference_version": { + "description": "The genome version of the reference file.", + "type": "string", + "example": "GencodeV27; Ensembl 87", + "user_friendly": "Reference version" + } + } +} diff --git a/tests/resources/hca/type/file/sequence_file.json b/tests/resources/hca/type/file/sequence_file.json new file mode 100644 index 0000000..0ea0c0c --- /dev/null +++ b/tests/resources/hca/type/file/sequence_file.json @@ -0,0 +1,91 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A file of read sequences generated by a sequencing experiment.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "file_core", + "read_index" + ], + "title": "Sequence file", + "name": "sequence_file", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern": "^(http|https)://schema.(.*?)humancellatlas.org/type/file/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/sequence_file" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "file" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "file_core" : { + "description": "Core file-level information.", + "type": "object", + "$ref": "core/file/file_core.json", + "user_friendly": "File core" + }, + "read_index": { + "description": "The sequencing read this file represents.", + "type": "string", + "example": "Should be one of: read1, read2, index1, index2", + "enum": [ + "read1", + "read2", + "read3", + "read4", + "index1", + "index2", + "single-end, non-indexed" + ], + "user_friendly": "Read index", + "guidelines": "If a sequencing experiment is single-end, enter 'read1'." + }, + "lane_index": { + "description": "The lane that this file was sequenced from.", + "type": "integer", + "example": 1, + "user_friendly": "Lane index" + }, + "read_length": { + "description": "The length of a sequenced read in this file, in nucleotides.", + "type": "integer", + "example": 51, + "user_friendly": "Read length" + }, + "insdc_run_accessions": { + "description": "An International Nucleotide Sequence Database Collaboration (INSDC) run accession.", + "type": "array", + "items": { + "pattern": "^[D|E|S]RR[0-9]+$", + "type": "string" + }, + "user_friendly": "INSDC run accession", + "example": "SRR0000000", + "guidelines": "Enter accession if run has been archived. Accession can be from the DDBJ, NCBI, or EMBL-EBI and must start with DRR, SRR, or ERR, respectively." + }, + "library_prep_id" : { + "description": "A unique ID for the library preparation.", + "type": "string", + "example": "tech_rep_group_001", + "user_friendly": "Library preparation ID", + "guidelines": "Indicate which samples are from the same library preparation by providing a unique identifier for each library preparation." + } + } +} diff --git a/tests/resources/hca/type/file/supplementary_file.json b/tests/resources/hca/type/file/supplementary_file.json new file mode 100644 index 0000000..312b60d --- /dev/null +++ b/tests/resources/hca/type/file/supplementary_file.json @@ -0,0 +1,51 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Supplementary files belonging to a project.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "file_core" + ], + "title": "Supplementary file", + "name": "supplementary_file", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern": "^(http|https)://schema.(.*?)humancellatlas.org/type/file/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/supplementary_file" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "file" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "file_core" : { + "description": "Core file-level information.", + "type": "object", + "$ref": "core/file/file_core.json", + "user_friendly": "File core" + }, + "file_description" : { + "description": "A short description of the file contents.", + "type": "string", + "example": "Protocol for FACS enrichment; Image of spleen sample collection location", + "user_friendly": "File description", + "guidelines": "File description could include information about how the file was generated." + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/type/process/analysis/analysis_process.json b/tests/resources/hca/type/process/analysis/analysis_process.json new file mode 100644 index 0000000..cdfcd16 --- /dev/null +++ b/tests/resources/hca/type/process/analysis/analysis_process.json @@ -0,0 +1,220 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the analysis process.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "process_core", + "type", + "reference_files", + "timestamp_start_utc", + "timestamp_stop_utc", + "tasks", + "inputs", + "analysis_run_type" + ], + "title": "Analysis process", + "name": "analysis_process", + "type": "object", + "definitions": { + "task": { + "additionalProperties": false, + "required": [ + "task_name", + "start_time", + "stop_time", + "disk_size", + "docker_image", + "cpus", + "memory", + "zone" + ], + "type": "object", + "properties": { + "disk_size": { + "description": "Name of the disk volume mounted to the VM for the task.", + "type": "string", + "example": "local-disk 11 HDD", + "user_friendly": "Disk name", + "guidelines": "Indicate both disk type and disk size." + }, + "task_name": { + "description": "Name of the task.", + "type": "string", + "example": "CollectDuplicationMetrics; RSEMExpression", + "user_friendly": "Task name" + }, + "zone": { + "description": "Name of the Google Cloud zone where the task was run.", + "type": "string", + "example": "us-central1-b; europe-north1-a", + "user_friendly": "Zone" + }, + "log_err": { + "description": "Path where standard error is logged.", + "type": "string", + "user_friendly": "Log error" + }, + "start_time": { + "description": "Date and time when the task started.", + "type": "string", + "format": "date-time", + "example": "2019-04-23T20:25:25.969Z", + "guidelines": "Enter the time in date-time format: yyyy-mm-ddThh:mm:ssZ.", + "user_friendly": "Start time" + }, + "cpus": { + "description": "Number of CPUs used to run this task.", + "type": "integer", + "example": 2, + "user_friendly": "CPUs" + }, + "log_out": { + "description": "Path where standard output is logged.", + "type": "string", + "user_friendly": "Log out" + }, + "stop_time": { + "description": "Date and time when the task finished.", + "type": "string", + "format": "date-time", + "example": "2019-04-23T20:28:29.830Z", + "guidelines": "Enter the time in date-time format: yyyy-mm-ddThh:mm:ssZ.", + "user_friendly": "Stop time" + }, + "memory": { + "description": "Amount of memory allocated for this task.", + "type": "string", + "example": "7.5 GB", + "user_friendly": "Memory" + }, + "docker_image": { + "description": "Name of docker image where the task is stored and executed.", + "type": "string", + "example": "quay.io/humancellatlas/secondary-analysis-picard:v0.2.2-2.10.10", + "user_friendly": "Docker image" + } + } + }, + "parameter": { + "additionalProperties": false, + "required": [ + "parameter_name", + "parameter_value" + ], + "type": "object", + "properties": { + "checksum": { + "description": "MD5 checksum of the file.", + "type": "string", + "user_friendly": "Checksum", + "example": "e09a986c2e630130b1849d4bf9a94c06" + }, + "parameter_name": { + "description": "Name of parameter.", + "type": "string", + "example": "stranded; rsem_ref_index", + "user_friendly": "Parameter name" + }, + "parameter_value": { + "description": "Path to file for or value of parameter.", + "type": "string", + "example": "NONE; gs://hca-dcp-mint-test-data/reference/GRCh38_Gencode/gencode_v27_primary.tar", + "user_friendly": "Parameter value" + } + } + } + }, + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/process/analysis/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/analysis_process" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "process" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "process_core" : { + "description": "Core process-level information.", + "type": "object", + "$ref": "core/process/process_core.json", + "user_friendly": "Process core" + }, + "type": { + "description": "The type of process.", + "type": "object", + "$ref": "module/ontology/process_type_ontology.json", + "user_friendly": "Process type" + }, + "inputs": { + "description": "Input parameters used in the pipeline run.", + "type": "array", + "items": { + "type": "object", + "$ref": "type/process/analysis/analysis_process.json#/definitions/parameter" + }, + "user_friendly": "Input parameters" + }, + "tasks": { + "description": "Information about steps in the workflow.", + "type": "array", + "items": { + "type": "object", + "$ref": "type/process/analysis/analysis_process.json#/definitions/task" + }, + "user_friendly": "Workflow tasks" + }, + "timestamp_start_utc": { + "description": "Initial start time of the full pipeline in UTC.", + "type": "string", + "format": "date-time", + "user_friendly": "Start timestamp (UTC)", + "example": "2018-01-21T09:34:27Z", + "guidelines": "Enter the time in date-time format: yyyy-mm-ddThh:mm:ssZ." + }, + "timestamp_stop_utc": { + "description": "Terminal stop time of the full pipeline in UTC.", + "type": "string", + "format": "date-time", + "user_friendly": "Stop timestamp (UTC)", + "example": "2018-01-21T11:35:01Z", + "guidelines": "Enter the time in date-time format: yyyy-mm-ddThh:mm:ssZ." + }, + "analysis_run_type": { + "description": "Whether the analysis was run or was copied forward as an optimization.", + "type": "string", + "enum": [ + "run", + "copy-forward" + ], + "user_friendly": "Analysis run type", + "example": "Should be one of: run, or copy-forward." + }, + "reference_files": { + "description": "UUID of the file entities that contain the reference genome used in running the pipeline.", + "type": "array", + "items": { + "type": "string", + "pattern": "^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$", + "example": "b816d2d6-5f10-4447-4194-3d0a804454d6" + }, + "user_friendly": "Reference files" + } + } +} \ No newline at end of file diff --git a/tests/resources/hca/type/process/process.json b/tests/resources/hca/type/process/process.json new file mode 100644 index 0000000..e20f855 --- /dev/null +++ b/tests/resources/hca/type/process/process.json @@ -0,0 +1,106 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about a process completed in the experiment.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "process_core" + ], + "title": "Process", + "name": "process", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/process/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/process" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "process" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "process_core" : { + "description": "Core process-level information.", + "type": "object", + "$ref": "core/process/process_core.json", + "user_friendly": "Process core" + }, + "start_time": { + "description": "Date and time the process started.", + "type": "string", + "oneOf": [ + { + "format": "date-time" + }, + { + "pattern": "^((19|20)\\d\\d){1}([- \\./][01]\\d){0,1}([- \\./][0-3]\\d){0,1}$" + } + ], + "user_friendly": "Start time", + "example": "2019-01-16T12:00:00Z; 2019/01/16", + "guidelines": "Enter the time in date-time format: yyyy-mm-ddThh:mm:ssZ." + }, + "end_time": { + "description": "Date and time the process ended.", + "type": "string", + "oneOf": [ + { + "format": "date-time" + }, + { + "pattern": "^((19|20)\\d\\d){1}([- \\./][01]\\d){0,1}([- \\./][0-3]\\d){0,1}$" + } + ], + "user_friendly": "End time", + "example": "2019-01-16T12:00:00Z; 2019/01/16", + "guidelines": "Enter the time in date-time format: yyyy-mm-ddThh:mm:ssZ." + }, + "length_of_time": { + "description": "Length of time the process took to execute in Length of time unit.", + "pattern": "^[0-9]+\\.?[0-9]*-?[0-9]*\\.?[0-9]*$", + "type": "string", + "user_friendly": "Length of time", + "example": "10; 55-60", + "guidelines": "Enter a single value or a range of values separated by a hyphen." + }, + "length_of_time_unit": { + "description": "The unit in which Length of time is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Length of time unit" + }, + "type": { + "description": "The type of process.", + "type": "object", + "$ref": "module/ontology/process_type_ontology.json", + "user_friendly": "Process type" + }, + "deviation_from_protocol": { + "description": "A deviation from the protocol provided.", + "type": "string", + "user_friendly": "Deviation from protocol", + "example": "Skipped ACK lysis step; Used 100um filter instead of 40um filter" + }, + "insdc_experiment" : { + "description": "An International Nucleotide Sequence Database Collaboration (INSDC) experiment accession.", + "type": "object", + "$ref": "module/process/sequencing/insdc_experiment.json", + "user_friendly": "INSDC experiment accession" + } + } +} diff --git a/tests/resources/hca/type/project/project.json b/tests/resources/hca/type/project/project.json new file mode 100644 index 0000000..99a96b4 --- /dev/null +++ b/tests/resources/hca/type/project/project.json @@ -0,0 +1,161 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "A project entity contains information about the overall project.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "project_core", + "funders" + ], + "title": "Project", + "name": "project", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern": "^(http|https)://schema.(.*?)humancellatlas.org/type/project/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/project" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "project" + ] + }, + "provenance": { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "project_core": { + "description": "Core project-level information.", + "type": "object", + "$ref": "core/project/project_core.json", + "user_friendly": "Project core" + }, + "contributors": { + "description": "People contributing to any aspect of the project.", + "type": "array", + "items": { + "$ref": "module/project/contact.json" + }, + "user_friendly": "Contributors" + }, + "supplementary_links": { + "description": "External link(s) pointing to code, supplementary data files, or analysis files associated with the project which will not be uploaded.", + "type": "array", + "example": "https://github.com/czbiohub/tabula-muris;%20http://celltag.org/", + "items": { + "type": "string" + }, + "user_friendly": "Supplementary link(s)" + }, + "publications": { + "description": "Publications resulting from this project.", + "type": "array", + "items": { + "$ref": "module/project/publication.json" + }, + "user_friendly": "Publications" + }, + "insdc_project_accessions": { + "description": "An International Nucleotide Sequence Database Collaboration (INSDC) project accession.", + "type": "array", + "items": { + "type": "string", + "pattern": "^[D|E|S]RP[0-9]+$" + }, + "example": "SRP000000", + "user_friendly": "INSDC project accession", + "guidelines": "Enter accession if project has been archived. Accession can be from the DDBJ, NCBI, or EMBL-EBI and must start with DRP, SRP, or ERP, respectively." + }, + "ega_accessions": { + "description": "A list of accessions referring to EGA (European Genome-Phenome Archive) datasets or studies.", + "type": "array", + "items": { + "type": "string", + "pattern": "^EGA[DS][0-9]{11}$" + }, + "example": "EGAS00000000001; EGAD00000000002", + "guidelines": "Enter any EGA study or dataset accessions that relate to the project. Should start with EGAD or EGAS, study accession preferred.", + "user_friendly": "EGA Study/Dataset Accession(s)" + }, + "dbgap_accessions": { + "description": "A list of database of Genotypes and Phenotypes (dbGaP) study accessions.", + "type": "array", + "items": { + "type": "string", + "pattern": "^phs[0-9]{6}(\\.v[0-9])?(\\.p[0-9])?$" + }, + "example": "phs001997.v1.p1; phs001836", + "guidelines": "Enter any dbGaP study accessions that relate to this project. Should start with phs, can contain the specific version information.", + "user_friendly": "dbGaP Study Accession(s)" + }, + "geo_series_accessions": { + "description": "A Gene Expression Omnibus (GEO) series accession.", + "type": "array", + "items": { + "type": "string", + "pattern": "^GSE.*$" + }, + "example": "GSE00000", + "user_friendly": "GEO series accession", + "guidelines": "Enter accession if project has been archived. Accession must start with GSE." + }, + "array_express_accessions": { + "description": "An ArrayExpress accession.", + "type": "array", + "items": { + "type": "string", + "pattern": "^E-....-.*$" + }, + "example": "E-AAAA-00", + "user_friendly": "ArrayExpress accession", + "guidelines": "Enter accession if project has been archived. Accession must start with E-." + }, + "insdc_study_accessions": { + "description": "An International Nucleotide Sequence Database Collaboration (INSDC) study accession.", + "type": "array", + "items": { + "type": "string", + "pattern": "^PRJ[E|N|D][a-zA-Z][0-9]+$" + }, + "example": "PRJNA000000", + "user_friendly": "INSDC study accession", + "guidelines": "Enter accession if study has been archived. Accession can be from the DDBJ, NCBI, or EMBL-EBI and must start with PRJD, PRJN, or PRJE, respectively." + }, + "biostudies_accessions": { + "description": "A BioStudies study accession.", + "type": "array", + "items": { + "type": "string", + "pattern": "^S-[A-Z]{4}[0-9]+$" + }, + "example": "S-EXMP1; S-HCAS33", + "user_friendly": "BioStudies accession", + "guidelines": "Enter accession if study has been archived." + }, + "funders": { + "description": "Funding source(s) supporting the project.", + "type": "array", + "items": { + "$ref": "module/project/funder.json" + }, + "user_friendly": "Funding source(s)" + }, + "estimated_cell_count": { + "description": "An estimated number of cells in this project", + "type": "integer", + "example": "10000; 2100000", + "user_friendly": "Estimated cell count" + } + } +} diff --git a/tests/resources/hca/type/protocol/analysis/analysis_protocol.json b/tests/resources/hca/type/protocol/analysis/analysis_protocol.json new file mode 100644 index 0000000..4ddcbfa --- /dev/null +++ b/tests/resources/hca/type/protocol/analysis/analysis_protocol.json @@ -0,0 +1,63 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the analysis protocol.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "type" + ], + "title": "Analysis protocol", + "name": "analysis_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/analysis/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/analysis_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "type": { + "description": "The type of protocol.", + "type": "object", + "$ref": "module/ontology/process_type_ontology.json", + "user_friendly": "Protocol type" + }, + "computational_method": { + "description": "A URI to a versioned workflow and versioned execution environment in a GA4GH-compliant repository.", + "type": "string", + "user_friendly": "Computational method", + "example": "SmartSeq2SingleCell; 10x" + }, + "matrix": { + "description": "Information related to protocols that output a matrix.", + "type": "object", + "$ref": "module/protocol/matrix.json", + "user_friendly": "Matrix" + } + } +} diff --git a/tests/resources/hca/type/protocol/biomaterial_collection/aggregate_generation_protocol.json b/tests/resources/hca/type/protocol/biomaterial_collection/aggregate_generation_protocol.json new file mode 100644 index 0000000..89d051f --- /dev/null +++ b/tests/resources/hca/type/protocol/biomaterial_collection/aggregate_generation_protocol.json @@ -0,0 +1,57 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about how cultured cells are developed into cell aggregates.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "formation_method" + ], + "title": "Aggregate generation protocol", + "name": "aggregate_generation_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/biomaterial_collection/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/aggregate_generation_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core": { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "formation_method": { + "description": "Method used to form cell aggregates.", + "type": "string", + "example": "rocking; suspension cultures; hanging drops; spinner flasks", + "user_friendly": "Aggregate formation method" + }, + "cell_uniformity": { + "description": "Description of the cell aggregates uniformity after formation.", + "type": "string", + "example": "Mostly homogenous embryoid bodies of variable cell numbers; Low-homogeneity in morphology and size", + "user_friendly": "Aggregate cell uniformity" + } + } +} diff --git a/tests/resources/hca/type/protocol/biomaterial_collection/collection_protocol.json b/tests/resources/hca/type/protocol/biomaterial_collection/collection_protocol.json new file mode 100644 index 0000000..fa15842 --- /dev/null +++ b/tests/resources/hca/type/protocol/biomaterial_collection/collection_protocol.json @@ -0,0 +1,60 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the biomaterial collection protocol.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "method" + ], + "title": "Collection protocol", + "name": "collection_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/biomaterial_collection/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/collection_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "method": { + "description": "Method used to collect the biomaterial.", + "type": "object", + "$ref": "module/ontology/process_type_ontology.json", + "user_friendly": "Collection method" + }, + "reagents": { + "description": "A list of purchased reagents used in this protocol.", + "type": "array", + "items": { + "type": "object", + "$ref": "module/process/purchased_reagents.json" + }, + "user_friendly": "Protocol reagents" + } + } +} diff --git a/tests/resources/hca/type/protocol/biomaterial_collection/differentiation_protocol.json b/tests/resources/hca/type/protocol/biomaterial_collection/differentiation_protocol.json new file mode 100644 index 0000000..cc6e96b --- /dev/null +++ b/tests/resources/hca/type/protocol/biomaterial_collection/differentiation_protocol.json @@ -0,0 +1,98 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about how a cell is differentiated to a desired cell type or organoid.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "method" + ], + "title": "Differentiation protocol", + "name": "differentiation_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/biomaterial_collection/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/differentiation_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core": { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "method": { + "description": "Method applied to cell culture to induce a specific differentiation response.", + "type": "string", + "user_friendly": "Differentiation method", + "comment": "Consider making this an ontology in the future.", + "example": "Embryoid Body; Monolayer; Inductive Co-Culture" + }, + "media":{ + "description": "Culture media used to induce a specific differentiation response.", + "type": "string", + "user_friendly": "Differentiation media", + "example": "RPMI 1640 + B27; Neurobasal Media; StemPro-34 Serum-Free Medium" + }, + "small_molecules":{ + "description": "Small molecules added to stem cell medium to induce a specific differentiation response.", + "type": "string", + "user_friendly": "Small molecules", + "example": "Retinoic Acid; CHIR99021 (GSK-inhibitor); Activin A; BMP4" + }, + "target_cell_yield": { + "description": "Percent of target cells obtained after directed differentiation of origin cell.", + "type": "number", + "example": 95, + "user_friendly": "Percent target cell yield" + }, + "reagents": { + "description": "A list of purchased reagents used in the differentiation protocol.", + "type": "array", + "items": { + "type": "object", + "$ref": "module/process/purchased_reagents.json" + }, + "user_friendly": "Differentiation reagents" + }, + "target_pathway": { + "description": "Targeted pathway for specific differentiation response.", + "type": "string", + "user_friendly": "Target pathway", + "example": "Wnt pathway; Hedgehog signaling pathway", + "comment": "Consider making this an ontology in the future." + }, + "validation_method": { + "description": "Method used to validate origin cell successfully differentiated to target cell.", + "type": "string", + "user_friendly": "Differentiation validation method", + "example": "Pancreatic Cell DTZ Detection Assay; qPCR; Flow Cytometry; Immunocytochemistry Staining" + }, + "validation_result": { + "description": "Result confirming successful differentiation to target cell type.", + "type": "string", + "user_friendly": "Validation result", + "example": "CD103 Positive; Nestin Positive; HCN4 Positive; CD11C Negative" + } + } +} diff --git a/tests/resources/hca/type/protocol/biomaterial_collection/dissociation_protocol.json b/tests/resources/hca/type/protocol/biomaterial_collection/dissociation_protocol.json new file mode 100644 index 0000000..3a87aad --- /dev/null +++ b/tests/resources/hca/type/protocol/biomaterial_collection/dissociation_protocol.json @@ -0,0 +1,60 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the dissociation protocol used to separate individual cells or nuclei.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "method" + ], + "title": "Dissociation protocol", + "name": "dissociation_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/biomaterial_collection/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/dissociation_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "method": { + "description": "How cells or organelles were dissociated.", + "type": "object", + "$ref": "module/ontology/process_type_ontology.json", + "user_friendly": "Dissociation method" + }, + "reagents": { + "description": "A list of purchased reagents used in this protocol.", + "type": "array", + "items": { + "type": "object", + "$ref": "module/process/purchased_reagents.json" + }, + "user_friendly": "Protocol reagents" + } + } +} diff --git a/tests/resources/hca/type/protocol/biomaterial_collection/enrichment_protocol.json b/tests/resources/hca/type/protocol/biomaterial_collection/enrichment_protocol.json new file mode 100644 index 0000000..88b923c --- /dev/null +++ b/tests/resources/hca/type/protocol/biomaterial_collection/enrichment_protocol.json @@ -0,0 +1,74 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about how a biomaterial is enriched for a feature or characteristic of interest.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "method" + ], + "title": "Enrichment protocol", + "name": "enrichment_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/biomaterial_collection/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/enrichment_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "method": { + "description": "The method by which enrichment was achieved.", + "type": "object", + "$ref": "module/ontology/process_type_ontology.json", + "user_friendly": "Enrichment method" + }, + "markers": { + "description": "A list of markers used to enrich for or against certain cells.", + "type": "string", + "example": "CD4+ CD8-; HLA-G+", + "user_friendly": "Markers", + "guidelines": "Format as a space-delimited list of markers with +/- where + means enriched for and - means enriched against." + }, + "minimum_size": { + "description": "Minimum cell or organelle size passing selection, in microns.", + "type": "number", + "maximum": 10000, + "minimum": 0.01, + "user_friendly": "Minimum size selected", + "example": 70 + }, + "maximum_size": { + "description": "Maximum cell or organelle size passing selection, in microns.", + "type": "number", + "maximum": 10000, + "minimum": 0.01, + "user_friendly": "Maximum size selected", + "example": 90 + } + } +} diff --git a/tests/resources/hca/type/protocol/biomaterial_collection/ipsc_induction_protocol.json b/tests/resources/hca/type/protocol/biomaterial_collection/ipsc_induction_protocol.json new file mode 100644 index 0000000..cdfbda4 --- /dev/null +++ b/tests/resources/hca/type/protocol/biomaterial_collection/ipsc_induction_protocol.json @@ -0,0 +1,107 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about how a biomaterial is treated to become an induced pluripotent stem cell.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "method" + ], + "title": "iPSC induction protocol", + "name": "ipsc_induction_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/biomaterial_collection/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/ipsc_induction_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core": { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "method": { + "description": "Induction method applied to primary cell culture to induce pluripotent stem cell generation.", + "type": "string", + "enum": [ + "lentivirus", + "sendai virus", + "Gun particle", + "piggyBac transposon", + "miRNA viral", + "adenovirus", + "cre-loxP", + "plasmid", + "retroviral" + ], + "user_friendly": "Induction method", + "comment": "Consider making this field an ontology in the future", + "example": "Should be one of: lentivirus, sendai virus, Gun particle, piggyBac transposon, miRNA viral, adenovirus, cre-loxP, plasmid, or retroviral." + }, + "reprogramming_factors": { + "description": "Reprogramming factors added to primary cell culture to induce pluripotency.", + "type": "string", + "user_friendly": "Reprogramming factors", + "example": "POU5F1; SOX2; KLF4; c-MYC" + }, + "ipsc_induction_kit": { + "description": "Kit used to induce pluripotent stem cell generation.", + "type": "object", + "$ref": "module/process/purchased_reagents.json", + "user_friendly": "Induction kit" + }, + "pluripotency_test": { + "description": "Description of how pluripotency was tested in induced pluripotent stem cells.", + "type": "string", + "user_friendly": "Pluripotency test", + "example": "Teratoma formation; PluriTest; Rt-PCR" + }, + "percent_pluripotency": { + "description": "Percent of iPSCs that passed the pluripotency test.", + "type": "number", + "example": 97.2, + "user_friendly": "Percent pluripotency" + }, + "pluripotency_vector_removed": { + "description": "Whether a viral vector was removed after induction.", + "type": "string", + "enum": [ + "yes", + "no", + "unknown" + ], + "user_friendly": "Pluripotent vector removed", + "example": "Should be one of: yes, no, or unknown." + }, + "reagents": { + "description": "Additional purchased reagents used in this protocol.", + "type": "array", + "items": { + "type": "object", + "$ref": "module/process/purchased_reagents.json" + }, + "user_friendly": "Additional reagents" + } + } +} diff --git a/tests/resources/hca/type/protocol/biomaterial_collection/treatment_protocol.json b/tests/resources/hca/type/protocol/biomaterial_collection/treatment_protocol.json new file mode 100644 index 0000000..cb3473f --- /dev/null +++ b/tests/resources/hca/type/protocol/biomaterial_collection/treatment_protocol.json @@ -0,0 +1,77 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about how cells are subjected to a treatment or stimulus, such as an immune activator or a drug.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "method" + ], + "title": "Treatment protocol", + "name": "treatment_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/biomaterial_collection/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/treatment_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core": { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "method": { + "description": "Method applied to cell culture to induce a specific treatment response.", + "type": "array", + "items":{ + "$ref": "module/ontology/treatment_method_ontology.json" + }, + "user_friendly": "Treatment method" + }, + "media":{ + "description": "Culture media used to induce a specific treatment response.", + "type": "string", + "user_friendly": "Treatment media", + "example": "RPMI 1640; Complete Medium" + }, + "reagents": { + "description": "A list of purchased reagents used in the treatment protocol.", + "type": "array", + "items": { + "type": "object", + "$ref": "module/process/purchased_reagents.json" + }, + "user_friendly": "Treatment reagents" + }, + "target_pathway": { + "description": "Targeted pathway for specific treatment response.", + "type": "array", + "items":{ + "$ref": "module/ontology/target_pathway_ontology.json" + }, + "user_friendly": "Target pathway", + "example": "insulin signalling pathway; immune cell activation; chemokine signalling pathway." + } + } +} diff --git a/tests/resources/hca/type/protocol/imaging/imaging_preparation_protocol.json b/tests/resources/hca/type/protocol/imaging/imaging_preparation_protocol.json new file mode 100644 index 0000000..b86950a --- /dev/null +++ b/tests/resources/hca/type/protocol/imaging/imaging_preparation_protocol.json @@ -0,0 +1,126 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the preparation protocol of the imaged specimen used in an imaging experiment.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core" + ], + "dependencies": { + "permeabilisation_time": ["permeabilisation_time_unit"], + "permeabilisation_time_unit": ["permeabilisation_time"] + }, + "title": "Imaging preparation protocol", + "name": "imaging_preparation_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/imaging/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/imaging_preparation_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "fresh_slicing_method" : { + "description": "The method by which fresh tissue was sliced.", + "type": "string", + "user_friendly": "Fresh slicing method", + "example": "vibrotome" + }, + "imaged_slice_thickness": { + "description": "Thickness of the imaged slice in micrometres.", + "type" : "number", + "example": "10", + "user_friendly": "Imaged slice thickness" + }, + "final_slicing_method" : { + "description": "The method by which the final slice was obtained.", + "type": "string", + "user_friendly": "Final slicing method", + "example": "cryosectioning" + }, + "post_resection_interval" : { + "description": "Length of time between surgical resection and fresh slicing of tissue.", + "type": "number", + "user_friendly": "Time between resection and fresh slicing", + "example": "5" + }, + "post_resection_interval_unit": { + "description": "The unit of time in which the post resection interval is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Post resection interval time unit", + "example": "day" + }, + "pre_final_slice_preservation_method": { + "description": "Tissue preservation method used prior to final slicing.", + "type": "object", + "$ref": "module/biomaterial/preservation_storage.json", + "user_friendly": "Pre-final slice preservation method", + "example": "freezing" + }, + "post_final_slicing_interval": { + "description": "Length of time between secondary slicing and hybridization.", + "type" : "number", + "example": "7", + "user_friendly": "Post final slicing interval" + }, + "post_final_slicing_interval_unit": { + "description": "The unit of time in which the post final slicing interval is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Post final slicing interval time unit", + "example": "day" + }, + "fiducial_marker": { + "description": "Fiducial markers for the alignment of images taken across multiple rounds of imaging.", + "type" : "string", + "user_friendly": "Fiducial marker", + "example": "beads" + }, + "expansion_factor": { + "description": "Factor by which the imaged tissue was expanded in one dimension.", + "type" : "number", + "example": "3", + "user_friendly": "Expansion factor" + }, + "permeabilisation_time": { + "description": "The permeabilisation time in time units that the tissue was exposed to.", + "type": "number", + "example": "12", + "user_friendly": "Permeabilisation time" + }, + "permeabilisation_time_unit": { + "description": "The unit in which permeabilisation time is expressed.", + "type": "object", + "$ref": "module/ontology/time_unit_ontology.json", + "user_friendly": "Permeabilisation time unit" + } + } +} + + + diff --git a/tests/resources/hca/type/protocol/imaging/imaging_protocol.json b/tests/resources/hca/type/protocol/imaging/imaging_protocol.json new file mode 100644 index 0000000..dbb080a --- /dev/null +++ b/tests/resources/hca/type/protocol/imaging/imaging_protocol.json @@ -0,0 +1,145 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the imaging protocol.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "microscopy_technique", + "magnification" + ], + "title": "Imaging Protocol", + "name": "imaging_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/imaging/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/imaging_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "microscope_setup_description": { + "description": "Description of the microscope setup.", + "type": "string", + "user_friendly": "Microscope setup description", + "example": "Motorized stage (SCAN IM 112 x 74, Marzhauser), sCMOS camera (Zyla 4.2; Andor), 60x, Plan-Apo, 1.3 NA, silicone oil objective (UPLSAPO60XS2; Olympus).", + "guidelines": "Include manufacturer and model information about the stand, camera, and objective." + }, + "microscopy_technique": { + "description": "The type of microscopy.", + "type": "object", + "$ref": "module/ontology/microscopy_ontology.json", + "user_friendly": "Microscopy technique" + }, + "magnification": { + "description": "Magnification of the objective used for imaging.", + "type": "string", + "user_friendly": "Magnification", + "example": "60x; 100x" + }, + "numerical_aperture": { + "description": "Numerical aperture of the objective.", + "type": "number", + "user_friendly": "Numerical aperture", + "example": "1.3; 0.75" + }, + "immersion_medium_type": { + "description": "Immersion medium used for imaging.", + "type": "string", + "user_friendly": "Immersion medium", + "example": "oil; air" + }, + "immersion_medium_refractive_index": { + "description": "Refractive index of the immersion medium used for imaging.", + "type": "number", + "user_friendly": "Refractive index of the immersion medium", + "example": "1.5; 1" + }, + "pixel_size": { + "description": "Pixel size in nanometers.", + "type": "number", + "user_friendly": "Pixel size", + "example": "109" + }, + "number_of_tiles": { + "description": "Number of XY tiles in the experiment.", + "type": "integer", + "user_friendly": "Number of tiles", + "example": "2000" + }, + "tile_size_y": { + "description": "Y size of the tile in micrometers.", + "type": "number", + "user_friendly": "Tile size Y", + "example": "100" + }, + "tile_size_x": { + "description": "X size of the tile in micrometers.", + "type": "number", + "user_friendly": "Tile size X", + "example": "100" + }, + "z_stack_step_size": { + "description": "Z-stack step size in nanometers.", + "type": "number", + "user_friendly": "Z stack step size", + "example": "200" + }, + "number_of_z_steps": { + "description": "Number of steps in a Z stack.", + "type": "integer", + "user_friendly": "Number of Z steps", + "example": "40" + }, + "overlapping_tiles": { + "description": "Whether tiles were collected with overlap.", + "type": "string", + "user_friendly": "Overlapping tiles", + "example": "Should be one of: yes, or no.", + "enum": [ + "yes", + "no" + ] + }, + "channel": { + "description": "Information about each channel used in the imaging protocol.", + "type": "array", + "items": { + "$ref": "module/protocol/channel.json" + }, + "user_friendly": "Channel" + }, + "probe": { + "description": "Information about each probe in the imaging experiment.", + "type": "array", + "items": { + "$ref": "module/protocol/probe.json" + }, + "user_friendly": "Probe" + } + } +} diff --git a/tests/resources/hca/type/protocol/protocol.json b/tests/resources/hca/type/protocol/protocol.json new file mode 100644 index 0000000..a247b94 --- /dev/null +++ b/tests/resources/hca/type/protocol/protocol.json @@ -0,0 +1,51 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the protocol.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core" + ], + "title": "Protocol", + "name": "protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "type": { + "description": "The type of protocol.", + "type": "object", + "$ref": "module/ontology/process_type_ontology.json", + "user_friendly": "Protocol type", + "example": "sample enrichment" + } + } +} diff --git a/tests/resources/hca/type/protocol/sequencing/library_preparation_protocol.json b/tests/resources/hca/type/protocol/sequencing/library_preparation_protocol.json new file mode 100644 index 0000000..d6e5be9 --- /dev/null +++ b/tests/resources/hca/type/protocol/sequencing/library_preparation_protocol.json @@ -0,0 +1,179 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about how a sequencing library was prepared.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "library_construction_method", + "input_nucleic_acid_molecule", + "nucleic_acid_source", + "end_bias", + "strand" + ], + "title": "Library preparation protocol", + "name": "library_preparation_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/sequencing/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/library_preparation_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "cell_barcode": { + "description": "Information about cell identifier barcodes.", + "type": "object", + "$ref": "module/process/sequencing/barcode.json", + "user_friendly": "Cell barcode" + }, + "spatial_barcode": { + "description": "Information about spatial barcodes.", + "type": "object", + "$ref": "module/process/sequencing/barcode.json", + "user_friendly": "Spatial barcode" + }, + "input_nucleic_acid_molecule": { + "description": "Starting nucleic acid molecule isolated for sequencing.", + "type": "object", + "$ref": "module/ontology/biological_macromolecule_ontology.json", + "user_friendly": "Input nucleic acid molecule" + }, + "nucleic_acid_source": { + "description": "Source cells or organelles from which nucleic acid molecules were collected.", + "type": "string", + "enum": [ + "bulk cell", + "single cell", + "single nucleus", + "bulk nuclei", + "mitochondria" + ], + "user_friendly": "Nucleic acid source", + "example": "Should be one of: single cell, bulk cell, single nucleus, bulk nuclei, or mitochondria." + }, + "library_construction_method": { + "description": "The general method for sequencing library construction.", + "type": "object", + "$ref": "module/ontology/library_construction_ontology.json", + "user_friendly": "Library construction method" + }, + "library_construction_kit": { + "description": "Name of kit used to construct the sequencing library.", + "type": "object", + "$ref": "module/process/purchased_reagents.json", + "user_friendly": "Library construction kit" + }, + "nucleic_acid_conversion_kit": { + "description": "Name of kit used to convert RNA to DNA for sequencing.", + "type": "object", + "$ref": "module/process/purchased_reagents.json", + "user_friendly": "Nucleic acid conversion kit" + }, + "end_bias": { + "description": "The type of tag or end bias the library has.", + "type": "string", + "example": "Should be one of: 3 prime tag, 3 prime end bias, 5 prime tag, 5 prime end bias, or full length.", + "enum": [ + "3 prime tag", + "3 prime end bias", + "5 prime tag", + "5 prime end bias", + "full length" + ], + "user_friendly": "End bias", + "guidelines": "Enter 'full length' if there is no tag or end bias." + }, + "primer": { + "description": "Primer used for cDNA synthesis from RNA.", + "type": "string", + "enum": [ + "poly-dT", + "random" + ], + "user_friendly": "Primer", + "example": "Should be one of: poly-dT, or random." + }, + "strand": { + "description": "Library strandedness.", + "type": "string", + "enum": [ + "first", + "second", + "unstranded", + "not provided" + ], + "example": "Should be one of: first, second, unstranded, or not provided.", + "user_friendly": "Strand", + "guidelines": "Enter 'first' if sequenced molecule is only the strand generated during first strand synthesis. Enter 'second' if sequenced molecule is only the strand generated during second strand synthesis. Enter 'unstranded' if both strands were sequenced." + }, + "spike_in_kit": { + "description": "Information about a spike-in kit.", + "type": "object", + "$ref": "module/process/purchased_reagents.json", + "user_friendly": "Spike-in kit" + }, + "spike_in_dilution": { + "description": "Dilution of spike-in.", + "type": "integer", + "maximum": 1000000, + "minimum": 1, + "user_friendly": "Spike-in dilution", + "example": 100 + }, + "umi_barcode": { + "description": "Information about unique molecular identifier (UMI) barcodes.", + "type": "object", + "$ref": "module/process/sequencing/barcode.json", + "user_friendly": "UMI barcode" + }, + "library_preamplification_method": { + "description": "The method used to amplify RNA prior to adaptor ligation.", + "type": "object", + "$ref": "module/ontology/library_amplification_ontology.json", + "user_friendly": "Library pre-amplification method" + }, + "cdna_library_amplification_method": { + "description": "The method used to amplify cDNA library prior to sequencing.", + "type": "object", + "$ref": "module/ontology/library_amplification_ontology.json", + "user_friendly": "cDNA library amplification method" + }, + "nominal_length": { + "description": "Average (insert) size of the fragments being sequenced.", + "type": "integer", + "user_friendly": "Nominal length", + "example": 250 + }, + "nominal_sdev": { + "description": "Standard deviation of the (insert) size of the fragments being sequenced.", + "type": "integer", + "user_friendly": "Nominal standard deviation", + "example": 30 + } + } +} diff --git a/tests/resources/hca/type/protocol/sequencing/sequencing_protocol.json b/tests/resources/hca/type/protocol/sequencing/sequencing_protocol.json new file mode 100644 index 0000000..9e85111 --- /dev/null +++ b/tests/resources/hca/type/protocol/sequencing/sequencing_protocol.json @@ -0,0 +1,78 @@ +{ + "$schema": "http://json-schema.org/draft-07/schema#", + "description": "Information about the sequencing protocol.", + "additionalProperties": false, + "required": [ + "describedBy", + "schema_type", + "protocol_core", + "instrument_manufacturer_model", + "paired_end", + "method" + ], + "title": "Sequencing protocol", + "name": "sequencing_protocol", + "type": "object", + "properties": { + "describedBy": { + "description": "The URL reference to the schema.", + "type": "string", + "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/type/protocol/sequencing/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/sequencing_protocol" + }, + "schema_version": { + "description": "The version number of the schema in major.minor.patch format.", + "type": "string", + "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$", + "example": "4.6.1" + }, + "schema_type": { + "description": "The type of the metadata schema entity.", + "type": "string", + "enum": [ + "protocol" + ] + }, + "provenance" : { + "description": "Provenance information provided by the system.", + "type": "object", + "$ref": "system/provenance.json" + }, + "protocol_core" : { + "description": "Core protocol-level information.", + "type": "object", + "$ref": "core/protocol/protocol_core.json", + "user_friendly": "Protocol core" + }, + "instrument_manufacturer_model": { + "description": "The manufacturer and model of the sequencer.", + "type": "object", + "$ref": "module/ontology/instrument_ontology.json", + "user_friendly": "Instrument manufacturer and model" + }, + "local_machine_name": { + "description": "Local name for the particular machine used for sequencing.", + "type": "string", + "user_friendly": "Local machine name", + "example": "Machine1; HSMA-20" + }, + "paired_end": { + "description": "Whether the sequenced molecule was sequenced from both ends.", + "type": "boolean", + "example": "Should be one of: yes, or no.", + "guidelines": "If 3' 10x v2 was used, enter no.", + "user_friendly": "Paired end" + }, + "method": { + "description": "The general method for sequencing.", + "type": "object", + "$ref": "module/ontology/sequencing_ontology.json", + "user_friendly": "Sequencing method" + }, + "s10x": { + "description": "Fields specific for 10x experiments.", + "type": "object", + "$ref": "module/process/sequencing/S10x.json", + "user_friendly": "10x-specific" + } + } +} diff --git a/tests/resources/hca/update_log.csv b/tests/resources/hca/update_log.csv new file mode 100644 index 0000000..3231ff1 --- /dev/null +++ b/tests/resources/hca/update_log.csv @@ -0,0 +1 @@ +Schema,Change type,Change message,Version,Date diff --git a/tests/resources/hca/versions.json b/tests/resources/hca/versions.json new file mode 100644 index 0000000..e1caa7a --- /dev/null +++ b/tests/resources/hca/versions.json @@ -0,0 +1,139 @@ +{ + "last_update_date": "2022-10-31T11:11:44Z", + "version_numbers": { + "core": { + "biomaterial": { + "biomaterial_core": "8.2.0" + }, + "file": { + "file_core": "6.4.0" + }, + "process": { + "process_core": "10.0.0" + }, + "project": { + "project_core": "7.0.5" + }, + "protocol": { + "protocol_core": "5.2.5" + } + }, + "module": { + "biomaterial": { + "cell_morphology": "6.1.7", + "death": "5.5.1", + "familial_relationship": "6.0.3", + "growth_conditions": "6.4.2", + "human_specific": "1.0.11", + "medical_history": "5.2.8", + "mouse_specific": "1.0.8", + "preservation_storage": "6.1.1", + "state_of_specimen": "6.0.0", + "timecourse": "2.0.2" + }, + "ontology": { + "biological_macromolecule_ontology": "5.3.5", + "cell_cycle_ontology": "5.3.6", + "cell_type_ontology": "5.3.6", + "cellular_component_ontology": "1.0.5", + "contributor_role_ontology": "2.0.0", + "development_stage_ontology": "5.3.6", + "disease_ontology": "5.4.0", + "enrichment_ontology": "1.2.6", + "ethnicity_ontology": "5.3.9", + "file_content_ontology": "1.1.0", + "file_format_ontology": "1.0.0", + "instrument_ontology": "5.3.6", + "length_unit_ontology": "5.3.5", + "library_amplification_ontology": "1.2.5", + "library_construction_ontology": "1.2.5", + "mass_unit_ontology": "5.3.5", + "microscopy_ontology": "1.0.5", + "organ_ontology": "5.3.7", + "organ_part_ontology": "5.3.5", + "process_type_ontology": "5.3.5", + "protocol_type_ontology": "5.3.5", + "sequencing_ontology": "1.1.5", + "species_ontology": "5.3.5", + "strain_ontology": "5.3.6", + "target_pathway_ontology": "1.0.0", + "time_unit_ontology": "5.3.5", + "treatment_method_ontology": "1.0.0" + }, + "process": { + "purchased_reagents": "6.1.0", + "sequencing": { + "10x": "1.0.5", + "barcode": "5.2.7", + "insdc_experiment": "2.0.0", + "plate_based_sequencing": "3.0.0" + } + }, + "project": { + "contact": "9.0.0", + "funder": "2.0.0", + "publication": "7.0.0" + }, + "protocol": { + "channel": "2.0.4", + "matrix": "2.0.0", + "probe": "1.1.1" + } + }, + "system": { + "file_descriptor": "2.0.0", + "license": "1.0.0", + "links": "3.1.0", + "provenance": "1.1.0" + }, + "type": { + "biomaterial": { + "cell_line": "15.1.0", + "cell_suspension": "13.3.0", + "donor_organism": "15.6.1", + "imaged_specimen": "3.3.0", + "organoid": "11.3.0", + "specimen_from_organism": "10.5.0" + }, + "file": { + "analysis_file": "6.5.0", + "image_file": "2.5.0", + "reference_file": "3.5.0", + "sequence_file": "9.5.0", + "supplementary_file": "2.5.0" + }, + "process": { + "analysis": { + "analysis_process": "12.0.0" + }, + "process": "9.2.0" + }, + "project": { + "project": "17.0.0" + }, + "protocol": { + "analysis": { + "analysis_protocol": "10.0.0" + }, + "biomaterial_collection": { + "aggregate_generation_protocol": "2.1.0", + "collection_protocol": "9.2.0", + "differentiation_protocol": "2.2.0", + "dissociation_protocol": "6.2.0", + "enrichment_protocol": "3.1.0", + "ipsc_induction_protocol": "3.2.0", + "treatment_protocol": "1.0.0" + }, + "imaging": { + "imaging_preparation_protocol": "2.3.0", + "imaging_protocol": "11.4.0" + }, + "protocol": "7.1.0", + "sequencing": { + "library_preparation_protocol": "6.3.1", + "sequencing_protocol": "10.1.0" + } + } + } + } +} \ No newline at end of file diff --git a/tests/test_importers/test_jsonschema_importer.py b/tests/test_importers/test_jsonschema_importer.py index 5407c32..c59b337 100644 --- a/tests/test_importers/test_jsonschema_importer.py +++ b/tests/test_importers/test_jsonschema_importer.py @@ -4,6 +4,9 @@ import unittest import os +from pathlib import Path + +from linkml_runtime import SchemaView from linkml_runtime.utils.compile_python import compile_python from schema_automator.importers.jsonschema_import_engine import JsonSchemaImportEngine @@ -64,7 +67,7 @@ def test_convert_dosdp(self): axiom_type_options = schema.enums['axiom_type_options'] self.assertIn('equivalentTo', axiom_type_options.permissible_values) self.assertIn('axiom_type', schema.slots) - self.assertIn('printf_clause', schema.classes) + self.assertIn('PrintfClause', schema.classes) def test_convert_vrs(self): """Test JSONSchema conversion.""" @@ -93,3 +96,32 @@ def test_obo_registry(self): self.assertIn('activity_status', schema.slots) self.assertEqual('activity_status_options', schema.slots['activity_status'].range) + def test_import_hca_project(self): + """This also tests the ability to import a whole project. + + Note that the following modifications were made: + + - changed 10x to S10x + - modified links to remove name clashes with classes + + - renamed protocol to protocol_reference + - renamed supplementary_file to supplementary_file_reference + + """ + ie = JsonSchemaImportEngine(use_attributes=True) + import_path = Path(INPUT_DIR) / "hca" + export_path = Path(OUTPUT_DIR) / "hca" + root_path = ie.import_project(import_path, export_path, name="hca") + print(root_path) + sv = SchemaView(root_path) + c = sv.get_class("OrganPartOntology") + ont_slot = c.attributes["ontology"] + rng = ont_slot.range + edef = sv.get_enum(rng) + print(yaml_dumper.dumps(edef)) + print(yaml_dumper.dumps(c)) + self.assertEqual(2, len(edef.include)) + self.assertIsNotNone(ont_slot.title) + jsonschema_str = JsonSchemaGenerator(root_path).serialize() + + diff --git a/tests/test_importers/test_tabular_importer.py b/tests/test_importers/test_tabular_importer.py new file mode 100644 index 0000000..0368c77 --- /dev/null +++ b/tests/test_importers/test_tabular_importer.py @@ -0,0 +1,39 @@ +# -*- coding: utf-8 -*- + +import unittest +import os +from pathlib import Path +from sys import platform + +import pandas as pd + +from schema_automator.importers.tabular_import_engine import TableImportEngine +from schema_automator.utils import write_schema +from tests import INPUT_DIR, OUTPUT_DIR + +OUT = os.path.join(OUTPUT_DIR, "BioMRLs.yaml") +INPUT_HTML = os.path.join(INPUT_DIR, "BioMRLs-table.html") + + +class TestTableImporter(unittest.TestCase): + """Tests import from tables data packages """ + + def setUp(self) -> None: + pass + + def test_import(self): + """ + Test importing a table from HTML via BS + """ + ie = TableImportEngine(parent="BioMRL", + element_type="enum", + columns=["permissible_value", "description"]) + # this doesn't work on windows: + dfs = pd.read_html(Path(f"{INPUT_HTML}").as_uri()) + schema = ie.import_from_dataframe(dfs[0]) + write_schema(schema, OUT) + + + + + From f858a0a609d446e7834809d96344e2ab0e1e56f4 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Thu, 2 Feb 2023 19:47:03 -0800 Subject: [PATCH 02/88] Implement RDFS importer. Bypasses issues with #114 (#115) * Implement RDFS importer. Bypasses issues with #114 See also https://github.com/linkml/linkml/issues/1278 * added cli for imports-rdfs --- schema_automator/cli.py | 32 +- .../importers/rdfs_import_engine.py | 224 +++++++++ tests/resources/reproschema.ofn | 443 ++++++++++++++++++ tests/resources/reproschema.ttl | 436 +++++++++++++++++ tests/test_importers/test_owl_importer.py | 4 +- tests/test_importers/test_rdfs_importer.py | 31 ++ 6 files changed, 1165 insertions(+), 5 deletions(-) create mode 100644 schema_automator/importers/rdfs_import_engine.py create mode 100644 tests/resources/reproschema.ofn create mode 100644 tests/resources/reproschema.ttl create mode 100644 tests/test_importers/test_rdfs_importer.py diff --git a/schema_automator/cli.py b/schema_automator/cli.py index 858d4f8..fbce81f 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -23,6 +23,7 @@ from schema_automator.importers.jsonschema_import_engine import JsonSchemaImportEngine from schema_automator.importers.owl_import_engine import OwlImportEngine from schema_automator.generalizers.rdf_data_generalizer import RdfDataGeneralizer +from schema_automator.importers.rdfs_import_engine import RdfsImportEngine from schema_automator.importers.sql_import_engine import SqlImportEngine from schema_automator.importers.tabular_import_engine import TableImportEngine from schema_automator.utils.schemautils import minify_schema, write_schema @@ -338,9 +339,6 @@ def import_json_schema(input, output, import_project: bool, schema_name, format, ie.import_project(input, output, name=schema_name, format=format) - - - @main.command() @click.argument('owlfile') @output_option @@ -367,6 +365,34 @@ def import_owl(owlfile, output, **args): write_schema(schema, output) +@main.command() +@click.argument('rdfsfile') +@output_option +@schema_name_option +@click.option('--input-type', '-I', + default='turtle', + help="Input format, eg. turtle") +@click.option('--identifier', '-I', help="Slot to use as identifier") +@click.option('--model-uri', help="Model URI prefix") +@click.option('--metamodel-mappings', + help="Path to metamodel mappings YAML dicitonary") +@click.option('--output', '-o', help="Path to saved yaml schema") +def import_rdfs(rdfsfile, output, metamodel_mappings, **args): + """ + Import an RDFS schema to LinkML + + Example: + + schemauto import-rdfs prov.rdfs.ttl -o prov.yaml + """ + mappings_obj = None + if metamodel_mappings: + with open(metamodel_mappings) as f: + mappings_obj = yaml.safe_load(f) + sie = RdfsImportEngine(initial_metamodel_mappings=mappings_obj) + schema = sie.convert(rdfsfile, **args) + write_schema(schema, output) + @main.command() @click.argument('rdffile') @output_option diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py new file mode 100644 index 0000000..e67da6d --- /dev/null +++ b/schema_automator/importers/rdfs_import_engine.py @@ -0,0 +1,224 @@ +import click +import logging +import yaml +from typing import Union, Dict, Tuple, List, Any +from collections import defaultdict + +from linkml.utils.schema_builder import SchemaBuilder +from linkml_runtime.linkml_model import ( + SchemaDefinition, + SlotDefinition, + ClassDefinition, +) +from funowl.converters.functional_converter import to_python +from funowl import * + +from dataclasses import dataclass, field + +from linkml_runtime.utils.introspection import package_schemaview +from rdflib import Graph, RDF, OWL, URIRef, RDFS, SKOS, SDO, Namespace +from schema_automator.importers.import_engine import ImportEngine +from schema_automator.utils.schemautils import write_schema + + +HTTP_SDO = Namespace("http://schema.org/") + +DEFAULT_METAMODEL_MAPPINGS = { + "is_a": [RDFS.subClassOf, SKOS.broader], + "domain_of": [HTTP_SDO.domainIncludes, SDO.domainIncludes], + "rangeIncludes": [HTTP_SDO.rangeIncludes, SDO.rangeIncludes], + "exact_mappings": [OWL.sameAs, HTTP_SDO.sameAs], + ClassDefinition.__name__: [RDFS.Class, OWL.Class, SKOS.Concept], + SlotDefinition.__name__: [ + RDF.Property, + OWL.ObjectProperty, + OWL.DatatypeProperty, + OWL.AnnotationProperty, + ], +} + + +@dataclass +class RdfsImportEngine(ImportEngine): + """ + An ImportEngine that takes RDFS and converts it to a LinkML schema + """ + + mappings: dict = None + initial_metamodel_mappings: Dict[str, List[URIRef]] = None + metamodel_mappings: Dict[str, List[URIRef]] = None + reverse_metamodel_mappings: Dict[URIRef, List[str]] = None + include_unmapped_annotations = False + metamodel = None + + def __post_init__(self): + sv = package_schemaview("linkml_runtime.linkml_model.meta") + self.metamodel = sv + self.metamodel_mappings = defaultdict(list) + self.reverse_metamodel_mappings = defaultdict(list) + for k, vs in DEFAULT_METAMODEL_MAPPINGS.items(): + self.metamodel_mappings[k].extend(vs) + for v in vs: + self.reverse_metamodel_mappings[v].append(k) + if self.initial_metamodel_mappings: + for k, vs in self.initial_metamodel_mappings.items(): + self.metamodel_mappings[k].extend(vs) + for v in vs: + self.reverse_metamodel_mappings[v].append(k) + for e in sv.all_elements().values(): + mappings = [] + for ms in sv.get_mappings(e.name, expand=True).values(): + for m in ms: + uri = URIRef(m) + mappings.append(uri) + self.reverse_metamodel_mappings[uri].append(e.name) + self.metamodel_mappings[e.name] = mappings + + def convert( + self, + file: str, + name: str = None, + format="turtle", + default_prefix: str = None, + model_uri: str = None, + identifier: str = None, + **kwargs, + ) -> SchemaDefinition: + """ + Converts an OWL schema-style ontology + + :param file: + :param name: + :param model_uri: + :param identifier: + :param kwargs: + :return: + """ + self.mappings = {} + g = Graph() + g.parse(file, format=format) + if name is not None and default_prefix is None: + default_prefix = name + if name is None: + name = default_prefix + if name is None: + name = "example" + sb = SchemaBuilder(name=name) + schema = sb.schema + for k, v in g.namespaces(): + sb.add_prefix(k, v) + if default_prefix is not None: + schema.default_prefix = default_prefix + if default_prefix not in schema.prefixes: + sb.add_prefix(default_prefix, model_uri) + schema.id = schema.prefixes[default_prefix].prefix_reference + cls_slots = defaultdict(list) + props = [] + for rdfs_property_metaclass in self._rdfs_metamodel_iri( + SlotDefinition.__name__ + ): + for p in g.subjects(RDF.type, rdfs_property_metaclass): + props.append(p) + # implicit properties + for metap in ( + self.reverse_metamodel_mappings["domain_of"] + + self.reverse_metamodel_mappings["rangeIncludes"] + ): + for p, _, _o in g.triples((None, metap, None)): + props.append(p) + for p in set(props): + sn = self.iri_to_name(p) + init_dict = self._dict_for_subject(g, p) + if "domain_of" in init_dict: + for x in init_dict["domain_of"]: + cls_slots[x].append(sn) + del init_dict["domain_of"] + if "rangeIncludes" in init_dict: + init_dict["any_of"] = [{"range": x} for x in init_dict["rangeIncludes"]] + del init_dict["rangeIncludes"] + slot = SlotDefinition(sn, **init_dict) + slot.slot_uri = str(p.n3(g.namespace_manager)) + sb.add_slot(slot) + rdfs_classes = [] + for rdfs_class_metaclass in self._rdfs_metamodel_iri(ClassDefinition.__name__): + for s in g.subjects(RDF.type, rdfs_class_metaclass): + rdfs_classes.append(s) + # implicit classes + for metap in [RDFS.subClassOf]: + for s, _, o in g.triples((None, metap, None)): + rdfs_classes.append(s) + rdfs_classes.append(o) + for s in set(rdfs_classes): + cn = self.iri_to_name(s) + init_dict = self._dict_for_subject(g, s) + c = ClassDefinition(cn, **init_dict) + c.slots = cls_slots.get(cn, []) + c.class_uri = str(s.n3(g.namespace_manager)) + sb.add_class(c) + sb.add_defaults() + if identifier is not None: + id_slot = SlotDefinition(identifier, identifier=True, range="uriorcurie") + schema.slots[identifier] = id_slot + for c in schema.classes.values(): + if not c.is_a and not c.mixins: + if identifier not in c.slots: + c.slots.append(identifier) + return schema + + def _dict_for_subject(self, g: Graph, s: URIRef) -> Dict[str, Any]: + """ + Looks up triples for a subject and converts to dict using linkml keys. + + :param g: + :param p: + :return: + """ + init_dict = {} + for pp, obj in g.predicate_objects(s): + if pp == RDF.type: + continue + metaslot_name = self._element_from_iri(pp) + if metaslot_name is None: + logging.warning(f"Not mapping {pp}") + continue + if metaslot_name == "name": + metaslot_name = "title" + v = self._object_to_value(obj) + metaslot = self.metamodel.get_slot(metaslot_name) + if not metaslot or metaslot.multivalued: + if metaslot_name not in init_dict: + init_dict[metaslot_name] = [] + init_dict[metaslot_name].append(v) + else: + init_dict[metaslot_name] = v + return init_dict + + def _rdfs_metamodel_iri(self, name: str) -> List[URIRef]: + return self.metamodel_mappings.get(name, []) + + def _element_from_iri(self, iri: URIRef) -> str: + r = self.reverse_metamodel_mappings.get(iri, []) + if len(r) > 0: + if len(r) > 1: + logging.info(f"Multiple mappings for {iri}: {r}") + return r[0] + + def _object_to_value(self, obj: Any) -> Any: + if isinstance(obj, URIRef): + return self.iri_to_name(obj) + if isinstance(obj, Literal): + return obj.value + return obj + + def iri_to_name(self, v: URIRef) -> str: + n = self._as_name(v) + if n != v: + self.mappings[n] = v + return n + + def _as_name(self, v: URIRef): + v = str(v) + for sep in ["#", "/", ":"]: + if sep in v: + return v.split(sep)[-1] + return v diff --git a/tests/resources/reproschema.ofn b/tests/resources/reproschema.ofn new file mode 100644 index 0000000..7c6f1dc --- /dev/null +++ b/tests/resources/reproschema.ofn @@ -0,0 +1,443 @@ +Prefix(owl:=) +Prefix(rdf:=) +Prefix(xml:=) +Prefix(xsd:=) +Prefix(nidm:=) +Prefix(prov:=) +Prefix(rdfs:=) +Prefix(skos:=) +Prefix(schema:=) +Prefix(reproschema:=) + + +Ontology( +Declaration(Class(nidm:Assessment)) +Declaration(Class(nidm:DataElement)) +Declaration(Class(schema:CreativeWork)) +Declaration(Class(reproschema:Activity)) +Declaration(Class(reproschema:AdditionalNoteObj)) +Declaration(Class(reproschema:AdditionalProperty)) +Declaration(Class(reproschema:AllowExport)) +Declaration(Class(reproschema:AllowReplay)) +Declaration(Class(reproschema:AutoAdvance)) +Declaration(Class(reproschema:Choice)) +Declaration(Class(reproschema:ComputeSpecification)) +Declaration(Class(reproschema:DisableBack)) +Declaration(Class(reproschema:DontKnow)) +Declaration(Class(reproschema:Field)) +Declaration(Class(reproschema:MessageSpecification)) +Declaration(Class(reproschema:OverrideProperty)) +Declaration(Class(reproschema:Participant)) +Declaration(Class(reproschema:Protocol)) +Declaration(Class(reproschema:Response)) +Declaration(Class(reproschema:ResponseActivity)) +Declaration(Class(reproschema:ResponseOption)) +Declaration(Class(reproschema:Skipped)) +Declaration(Class(reproschema:SoftwareAgent)) +Declaration(Class(reproschema:TimedOut)) +Declaration(Class(reproschema:UnitOption)) +Declaration(Class(prov:Activity)) +Declaration(Class(prov:Agent)) +Declaration(Class(prov:Entity)) +Declaration(Class(prov:Person)) +Declaration(Class(prov:Plan)) +Declaration(Class(prov:SoftwareAgent)) +Declaration(NamedIndividual(reproschema:Activity)) +Declaration(NamedIndividual(reproschema:Field)) +Declaration(NamedIndividual(reproschema:Participant)) +Declaration(NamedIndividual(reproschema:Protocol)) +Declaration(NamedIndividual(reproschema:Response)) +Declaration(NamedIndividual(reproschema:ResponseActivity)) +Declaration(NamedIndividual(reproschema:SoftwareAgent)) +Declaration(AnnotationProperty(schema:domainIncludes)) +Declaration(AnnotationProperty(schema:rangeIncludes)) +Declaration(AnnotationProperty(schema:sameAs)) + + +############################ +# Classes +############################ + +# Class: reproschema:Activity (Activity) + +AnnotationAssertion(rdfs:comment reproschema:Activity "An assessment in a protocol.") +AnnotationAssertion(rdfs:label reproschema:Activity "Activity") +SubClassOf(reproschema:Activity schema:CreativeWork) + +# Class: reproschema:AdditionalNoteObj (Additional Notes Object) + +AnnotationAssertion(rdfs:comment reproschema:AdditionalNoteObj "A set of objects to define notes in a field. For example, most Redcap and NDA data dictionaries have notes for each item which needs to be captured in reproschema") +AnnotationAssertion(rdfs:label reproschema:AdditionalNoteObj "Additional Notes Object") + +# Class: reproschema:AdditionalProperty (Additional properties) + +AnnotationAssertion(rdfs:comment reproschema:AdditionalProperty "An object to describe the various properties added to assessments and fields.") +AnnotationAssertion(rdfs:label reproschema:AdditionalProperty "Additional properties") + +# Class: reproschema:AllowExport (Allow export) + +AnnotationAssertion(rdfs:comment reproschema:AllowExport "Indicates (by boolean) if data can be exported or not.") +AnnotationAssertion(rdfs:label reproschema:AllowExport "Allow export") + +# Class: reproschema:AllowReplay (Allow replay) + +AnnotationAssertion(rdfs:comment reproschema:AllowReplay "Indicates (by boolean) if items can be replayed or not.") +AnnotationAssertion(rdfs:label reproschema:AllowReplay "Allow replay") + +# Class: reproschema:AutoAdvance (Auto advance) + +AnnotationAssertion(rdfs:comment reproschema:AutoAdvance "Indicates (by boolean) if assessments in a protocol can auto advance or not.") +AnnotationAssertion(rdfs:label reproschema:AutoAdvance "Auto advance") + +# Class: reproschema:Choice (Response choice) + +AnnotationAssertion(rdfs:comment reproschema:Choice "An object to describe a response option.") +AnnotationAssertion(rdfs:label reproschema:Choice "Response choice") + +# Class: reproschema:ComputeSpecification (Compute Specification) + +AnnotationAssertion(rdfs:comment reproschema:ComputeSpecification "An object to define computations in an activity or protocol.") +AnnotationAssertion(rdfs:label reproschema:ComputeSpecification "Compute Specification") + +# Class: reproschema:DisableBack (Disable redo) + +AnnotationAssertion(rdfs:comment reproschema:DisableBack "Indicates (by boolean) if we can go back to a completed assessment in a protocol.") +AnnotationAssertion(rdfs:label reproschema:DisableBack "Disable redo") + +# Class: reproschema:DontKnow (Do not know) + +AnnotationAssertion(rdfs:comment reproschema:DontKnow "An element to describe the choice when response is not known.") +AnnotationAssertion(rdfs:label reproschema:DontKnow "Do not know") + +# Class: reproschema:Field (Field) + +AnnotationAssertion(rdfs:comment reproschema:Field "An item in an assessment.") +AnnotationAssertion(rdfs:label reproschema:Field "Field") +SubClassOf(reproschema:Field schema:CreativeWork) + +# Class: reproschema:MessageSpecification (Message Specification) + +AnnotationAssertion(rdfs:comment reproschema:MessageSpecification "An object to define messages in an activity or protocol.") +AnnotationAssertion(rdfs:label reproschema:MessageSpecification "Message Specification") + +# Class: reproschema:OverrideProperty (Additional properties) + +AnnotationAssertion(rdfs:comment reproschema:OverrideProperty "An object to override the various properties added to assessments and fields.") +AnnotationAssertion(rdfs:label reproschema:OverrideProperty "Additional properties") + +# Class: reproschema:Participant (Participant) + +AnnotationAssertion(rdfs:comment reproschema:Participant "An Agent describing characteristics associated with a participant.") +AnnotationAssertion(rdfs:label reproschema:Participant "Participant") +SubClassOf(reproschema:Participant prov:Agent) + +# Class: reproschema:Protocol (Protocol) + +AnnotationAssertion(rdfs:comment reproschema:Protocol "A representation of a study which comprises one or more assessments.") +AnnotationAssertion(rdfs:label reproschema:Protocol "Protocol") +SubClassOf(reproschema:Protocol schema:CreativeWork) + +# Class: reproschema:Response (Response) + +AnnotationAssertion(rdfs:comment reproschema:Response "Describes the response of an item.") +AnnotationAssertion(rdfs:label reproschema:Response "Response") +SubClassOf(reproschema:Response schema:CreativeWork) + +# Class: reproschema:ResponseActivity (ResponseActivity) + +AnnotationAssertion(rdfs:comment reproschema:ResponseActivity "Captures information about some action that took place. It also links to information (entities) that were used during the activity") +AnnotationAssertion(rdfs:label reproschema:ResponseActivity "ResponseActivity") +SubClassOf(reproschema:ResponseActivity schema:CreativeWork) + +# Class: reproschema:ResponseOption (Response option) + +AnnotationAssertion(rdfs:comment reproschema:ResponseOption "An element (object or by URL)to describe the properties of response of the Field item.") +AnnotationAssertion(rdfs:label reproschema:ResponseOption "Response option") + +# Class: reproschema:Skipped (Skipped) + +AnnotationAssertion(rdfs:comment reproschema:Skipped "An element to describe the choice when the item is skipped.") +AnnotationAssertion(rdfs:label reproschema:Skipped "Skipped") + +# Class: reproschema:SoftwareAgent (Software Agent) + +AnnotationAssertion(rdfs:comment reproschema:SoftwareAgent "Captures information about some action that took place. It also links to information (entities) that were used during the activity") +AnnotationAssertion(rdfs:label reproschema:SoftwareAgent "Software Agent") + +# Class: reproschema:TimedOut (Response timed out) + +AnnotationAssertion(rdfs:comment reproschema:TimedOut "A boolean element to describe if the response did not occur within the prescribed time.") +AnnotationAssertion(rdfs:label reproschema:TimedOut "Response timed out") + +# Class: reproschema:UnitOption (Unit options) + +AnnotationAssertion(rdfs:comment reproschema:UnitOption "An object to represent a human displayable name alongside the more formal value for units.") +AnnotationAssertion(rdfs:label reproschema:UnitOption "Unit options") + + +############################ +# Named Individuals +############################ + +# Individual: reproschema:Activity (Activity) + +ClassAssertion(nidm:Assessment reproschema:Activity) +ClassAssertion(prov:Entity reproschema:Activity) +ClassAssertion(prov:Plan reproschema:Activity) + +# Individual: reproschema:Field (Field) + +ClassAssertion(nidm:DataElement reproschema:Field) +ClassAssertion(prov:Entity reproschema:Field) + +# Individual: reproschema:Participant (Participant) + +ClassAssertion(prov:Person reproschema:Participant) + +# Individual: reproschema:Protocol (Protocol) + +ClassAssertion(prov:Entity reproschema:Protocol) +ClassAssertion(prov:Plan reproschema:Protocol) + +# Individual: reproschema:Response (Response) + +ClassAssertion(prov:Entity reproschema:Response) + +# Individual: reproschema:ResponseActivity (ResponseActivity) + +ClassAssertion(prov:Activity reproschema:ResponseActivity) + +# Individual: reproschema:SoftwareAgent (Software Agent) + +ClassAssertion(prov:SoftwareAgent reproschema:SoftwareAgent) + + +AnnotationAssertion(schema:domainIncludes nidm:subject_id reproschema:Participant) +AnnotationAssertion(rdfs:comment nidm:subject_id "The identifier of a participant") +AnnotationAssertion(rdfs:label nidm:subject_id "Participant identifier") +AnnotationAssertion(schema:domainIncludes schema:about reproschema:Activity) +AnnotationAssertion(schema:domainIncludes schema:about reproschema:Field) +AnnotationAssertion(schema:domainIncludes schema:about reproschema:Protocol) +AnnotationAssertion(rdfs:comment schema:about "The subject matter of the Field.") +AnnotationAssertion(schema:domainIncludes schema:associatedMedia reproschema:Activity) +AnnotationAssertion(schema:domainIncludes schema:associatedMedia reproschema:Field) +AnnotationAssertion(schema:domainIncludes schema:associatedMedia reproschema:Protocol) +AnnotationAssertion(rdfs:comment schema:associatedMedia "A media object that encodes this CreativeWork. This property is a synonym for encoding.") +AnnotationAssertion(rdfs:label schema:associatedMedia "associatedMedia") +AnnotationAssertion(schema:domainIncludes schema:citation reproschema:Activity) +AnnotationAssertion(schema:domainIncludes schema:description reproschema:Activity) +AnnotationAssertion(schema:domainIncludes schema:description reproschema:Field) +AnnotationAssertion(schema:domainIncludes schema:description reproschema:Protocol) +AnnotationAssertion(schema:domainIncludes schema:image reproschema:Choice) +AnnotationAssertion(schema:domainIncludes schema:image reproschema:Field) +AnnotationAssertion(rdfs:comment schema:image "An image of the item. This can be a URL or a fully described ImageObject.") +AnnotationAssertion(rdfs:label schema:image "image") +AnnotationAssertion(schema:domainIncludes schema:inLanguage reproschema:ResponseActivity) +AnnotationAssertion(schema:domainIncludes schema:isPartOf reproschema:Field) +AnnotationAssertion(schema:rangeIncludes schema:isPartOf reproschema:Activity) +AnnotationAssertion(schema:domainIncludes schema:maxValue reproschema:ResponseOption) +AnnotationAssertion(schema:domainIncludes schema:minValue reproschema:ResponseOption) +AnnotationAssertion(schema:domainIncludes schema:name reproschema:Choice) +AnnotationAssertion(schema:domainIncludes schema:question reproschema:Field) +AnnotationAssertion(schema:domainIncludes schema:readonlyValue reproschema:Field) +AnnotationAssertion(schema:domainIncludes schema:schemaVersion reproschema:Activity) +AnnotationAssertion(schema:domainIncludes schema:schemaVersion reproschema:Field) +AnnotationAssertion(schema:domainIncludes schema:schemaVersion reproschema:Protocol) +AnnotationAssertion(schema:domainIncludes schema:url reproschema:SoftwareAgent) +AnnotationAssertion(schema:domainIncludes schema:value reproschema:Choice) +AnnotationAssertion(schema:domainIncludes schema:value reproschema:Response) +AnnotationAssertion(schema:rangeIncludes schema:value schema:Boolean) +AnnotationAssertion(schema:rangeIncludes schema:value schema:Number) +AnnotationAssertion(schema:rangeIncludes schema:value schema:StructuredValue) +AnnotationAssertion(schema:rangeIncludes schema:value schema:Text) +AnnotationAssertion(schema:rangeIncludes schema:value schema:URL) +AnnotationAssertion(schema:rangeIncludes schema:value reproschema:DontKnow) +AnnotationAssertion(schema:rangeIncludes schema:value reproschema:Skipped) +AnnotationAssertion(schema:domainIncludes schema:valueRequired reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes schema:valueRequired reproschema:OverrideProperty) +AnnotationAssertion(schema:domainIncludes schema:version reproschema:Activity) +AnnotationAssertion(schema:domainIncludes schema:version reproschema:Field) +AnnotationAssertion(schema:domainIncludes schema:version reproschema:Protocol) +AnnotationAssertion(schema:domainIncludes schema:version reproschema:SoftwareAgent) +AnnotationAssertion(schema:domainIncludes reproschema:addProperties reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:addProperties reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes reproschema:addProperties reproschema:AdditionalProperty) +AnnotationAssertion(rdfs:comment reproschema:addProperties "An array of objects to describe the various properties added to assessments and fields.") +AnnotationAssertion(rdfs:label reproschema:addProperties "addProperties") +AnnotationAssertion(schema:domainIncludes reproschema:additionalNotesObj reproschema:Field) +AnnotationAssertion(schema:rangeIncludes reproschema:additionalNotesObj reproschema:AdditionalNoteObj) +AnnotationAssertion(rdfs:comment reproschema:additionalNotesObj "A set of objects to define notes in a field. For example, most Redcap and NDA data dictionaries have notes for each item which needs to be captured in reproschema.") +AnnotationAssertion(rdfs:label reproschema:additionalNotesObj "additional notes") +AnnotationAssertion(schema:domainIncludes reproschema:allow reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:allow reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes reproschema:allow schema:Thing) +AnnotationAssertion(rdfs:comment reproschema:allow "An array of items indicating properties allowed on an activity or protocol ") +AnnotationAssertion(rdfs:label reproschema:allow "allow") +AnnotationAssertion(schema:domainIncludes reproschema:choices reproschema:ResponseOption) +AnnotationAssertion(schema:rangeIncludes reproschema:choices schema:URL) +AnnotationAssertion(schema:rangeIncludes reproschema:choices reproschema:Choice) +AnnotationAssertion(schema:sameAs reproschema:choices schema:itemListElement) +AnnotationAssertion(rdfs:comment reproschema:choices "An array to list the available options for response of the Field item.") +AnnotationAssertion(rdfs:label reproschema:choices "choices") +AnnotationAssertion(schema:domainIncludes reproschema:column reproschema:AdditionalNoteObj) +AnnotationAssertion(schema:rangeIncludes reproschema:column rdf:langString) +AnnotationAssertion(rdfs:comment reproschema:column "An element to define the column name where the note was taken from.") +AnnotationAssertion(rdfs:label reproschema:column "column") +AnnotationAssertion(schema:domainIncludes reproschema:compute reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:compute reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes reproschema:compute reproschema:ComputeSpecification) +AnnotationAssertion(rdfs:comment reproschema:compute "An array of objects indicating computations in an activity or protocol and maps it to the corresponding Field item. scoring logic is a subset of all computations that could be performed and not all computations will be scoring. For example, one may want to do conversion from one unit to another. ") +AnnotationAssertion(rdfs:label reproschema:compute "computation") +AnnotationAssertion(schema:domainIncludes reproschema:cronTable reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:cronTable reproschema:Protocol) +AnnotationAssertion(schema:domainIncludes reproschema:datumType reproschema:ResponseOption) +AnnotationAssertion(schema:rangeIncludes reproschema:datumType schema:Text) +AnnotationAssertion(schema:rangeIncludes reproschema:datumType schema:URL) +AnnotationAssertion(rdfs:comment reproschema:datumType "Indicates what type of datum the response is (e.g. range,count,scalar etc.) for the Field item.") +AnnotationAssertion(rdfs:label reproschema:datumType "datumType") +AnnotationAssertion(schema:domainIncludes reproschema:inputType reproschema:Field) +AnnotationAssertion(schema:rangeIncludes reproschema:inputType schema:Text) +AnnotationAssertion(rdfs:comment reproschema:inputType "An element to describe the input type of a Field item.") +AnnotationAssertion(rdfs:label reproschema:inputType "inputType") +AnnotationAssertion(schema:domainIncludes reproschema:isAbout reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes reproschema:isAbout reproschema:OverrideProperty) +AnnotationAssertion(schema:domainIncludes reproschema:isAbout reproschema:Response) +AnnotationAssertion(schema:rangeIncludes reproschema:isAbout reproschema:Activity) +AnnotationAssertion(schema:rangeIncludes reproschema:isAbout reproschema:Field) +AnnotationAssertion(rdfs:comment reproschema:isAbout "A pointer to the node describing the item.") +AnnotationAssertion(rdfs:label reproschema:isAbout "isAbout") +AnnotationAssertion(schema:domainIncludes reproschema:isVis reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes reproschema:isVis reproschema:OverrideProperty) +AnnotationAssertion(schema:rangeIncludes reproschema:isVis schema:Boolean) +AnnotationAssertion(schema:rangeIncludes reproschema:isVis schema:Text) +AnnotationAssertion(rdfs:comment reproschema:isVis "An element to describe (by boolean or conditional statement) visibility conditions of items in an assessment.") +AnnotationAssertion(rdfs:label reproschema:isVis "visibility") +AnnotationAssertion(schema:domainIncludes reproschema:jsExpression reproschema:ComputeSpecification) +AnnotationAssertion(schema:domainIncludes reproschema:jsExpression reproschema:MessageSpecification) +AnnotationAssertion(schema:rangeIncludes reproschema:jsExpression schema:Boolean) +AnnotationAssertion(schema:rangeIncludes reproschema:jsExpression schema:Text) +AnnotationAssertion(rdfs:comment reproschema:jsExpression "A JavaScript expression for computations.") +AnnotationAssertion(rdfs:comment reproschema:jsExpression "A JavaScript expression to compute a score from other variables.") +AnnotationAssertion(rdfs:label reproschema:jsExpression "JavaScript Expression") +AnnotationAssertion(schema:domainIncludes reproschema:landingPage reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes reproschema:landingPage schema:Text) +AnnotationAssertion(schema:rangeIncludes reproschema:landingPage schema:URL) +AnnotationAssertion(rdfs:comment reproschema:landingPage "An element (by URL) to point to the protocol readme or landing page.") +AnnotationAssertion(rdfs:label reproschema:landingPage "Landing page content") +AnnotationAssertion(schema:domainIncludes reproschema:limit reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes reproschema:limit reproschema:OverrideProperty) +AnnotationAssertion(schema:rangeIncludes reproschema:limit schema:Text) +AnnotationAssertion(rdfs:comment reproschema:limit "An element to limit the duration (uses ISO 8601) this activity is allowed to be completed by once activity is available.") +AnnotationAssertion(rdfs:label reproschema:limit "limit") +AnnotationAssertion(schema:domainIncludes reproschema:maxRetakes reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes reproschema:maxRetakes reproschema:OverrideProperty) +AnnotationAssertion(schema:rangeIncludes reproschema:maxRetakes schema:Number) +AnnotationAssertion(rdfs:comment reproschema:maxRetakes "Defines number of times the item is allowed to be redone.") +AnnotationAssertion(rdfs:label reproschema:maxRetakes "maxRetakes") +AnnotationAssertion(schema:domainIncludes reproschema:message reproschema:MessageSpecification) +AnnotationAssertion(schema:rangeIncludes reproschema:message schema:Text) +AnnotationAssertion(schema:rangeIncludes reproschema:message rdf:langString) +AnnotationAssertion(rdfs:comment reproschema:message "The message to be conditionally displayed for an item. ") +AnnotationAssertion(rdfs:label reproschema:message "Message") +AnnotationAssertion(schema:domainIncludes reproschema:messages reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:messages reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes reproschema:messages reproschema:MessageSpecification) +AnnotationAssertion(rdfs:comment reproschema:messages "An array of objects to define conditional messages in an activity or protocol.") +AnnotationAssertion(rdfs:label reproschema:messages "messages") +AnnotationAssertion(schema:domainIncludes reproschema:multipleChoice reproschema:ResponseOption) +AnnotationAssertion(schema:rangeIncludes reproschema:multipleChoice schema:Boolean) +AnnotationAssertion(rdfs:comment reproschema:multipleChoice "Indicates (by bool) if response for the Field item has one or more answer.") +AnnotationAssertion(rdfs:label reproschema:multipleChoice "Multiple choice response expectation") +AnnotationAssertion(schema:domainIncludes reproschema:order reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:order reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes reproschema:order schema:URL) +AnnotationAssertion(schema:rangeIncludes reproschema:order reproschema:Activity) +AnnotationAssertion(schema:rangeIncludes reproschema:order reproschema:Field) +AnnotationAssertion(rdfs:comment reproschema:order "An ordered list to describe the order in which the items of an assessment or protocol appear in the user interface.") +AnnotationAssertion(rdfs:label reproschema:order "Order") +AnnotationAssertion(schema:domainIncludes reproschema:overrideProperties reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:overrideProperties reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes reproschema:overrideProperties reproschema:OverrideProperty) +AnnotationAssertion(rdfs:comment reproschema:overrideProperties "An array of objects to override the various properties added to assessments and fields.") +AnnotationAssertion(rdfs:label reproschema:overrideProperties "overrideProperties") +AnnotationAssertion(schema:domainIncludes reproschema:preamble reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:preamble reproschema:Field) +AnnotationAssertion(schema:rangeIncludes reproschema:preamble schema:Text) +AnnotationAssertion(schema:rangeIncludes reproschema:preamble rdf:langString) +AnnotationAssertion(rdfs:comment reproschema:preamble "The preamble for an assessment") +AnnotationAssertion(rdfs:label reproschema:preamble "Preamble") +AnnotationAssertion(schema:domainIncludes reproschema:randomMaxDelay reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes reproschema:randomMaxDelay reproschema:OverrideProperty) +AnnotationAssertion(schema:rangeIncludes reproschema:randomMaxDelay schema:Text) +AnnotationAssertion(rdfs:comment reproschema:randomMaxDelay "Present activity/item within some random offset of activity available time up to the maximum specified by this ISO 8601 duration") +AnnotationAssertion(rdfs:label reproschema:randomMaxDelay "randomMaxDelay") +AnnotationAssertion(schema:domainIncludes reproschema:responseOptions reproschema:Field) +AnnotationAssertion(schema:rangeIncludes reproschema:responseOptions schema:URL) +AnnotationAssertion(schema:rangeIncludes reproschema:responseOptions reproschema:ResponseOption) +AnnotationAssertion(rdfs:comment reproschema:responseOptions "An element (object or by URL)to describe the properties of response of the Field item.") +AnnotationAssertion(rdfs:label reproschema:responseOptions "Response options") +AnnotationAssertion(schema:domainIncludes reproschema:schedule reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes reproschema:schedule reproschema:OverrideProperty) +AnnotationAssertion(schema:rangeIncludes reproschema:schedule schema:Schedule) +AnnotationAssertion(schema:rangeIncludes reproschema:schedule schema:Text) +AnnotationAssertion(rdfs:comment reproschema:schedule "An element to set make activity available/repeat info using ISO 8601 repeating interval format.") +AnnotationAssertion(rdfs:label reproschema:schedule "Schedule") +AnnotationAssertion(schema:domainIncludes reproschema:shuffle reproschema:Activity) +AnnotationAssertion(schema:domainIncludes reproschema:shuffle reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes reproschema:shuffle schema:boolean) +AnnotationAssertion(rdfs:comment reproschema:shuffle "An element (bool) to determine if the list of items is shuffled or in order.") +AnnotationAssertion(rdfs:label reproschema:shuffle "Shuffle") +AnnotationAssertion(schema:domainIncludes reproschema:source reproschema:AdditionalNoteObj) +AnnotationAssertion(schema:rangeIncludes reproschema:source rdf:langString) +AnnotationAssertion(rdfs:comment reproschema:source "An element to define the source (eg. RedCap, NDA) where the note was taken from.") +AnnotationAssertion(rdfs:label reproschema:source "source") +AnnotationAssertion(schema:rangeIncludes reproschema:statusOptions schema:Text) +AnnotationAssertion(rdfs:comment reproschema:statusOptions "Provides information on whether or not a field item wants to be accompanied by the additional status option(s) defined in “statusOptions”") +AnnotationAssertion(rdfs:label reproschema:statusOptions "Status options") +AnnotationAssertion(schema:domainIncludes reproschema:unitOptions reproschema:ResponseOption) +AnnotationAssertion(schema:rangeIncludes reproschema:unitOptions reproschema:UnitOption) +AnnotationAssertion(rdfs:comment reproschema:unitOptions "A list of objects to represent a human displayable name alongside the more formal value for units.") +AnnotationAssertion(rdfs:label reproschema:unitOptions "unitOptions") +AnnotationAssertion(schema:domainIncludes reproschema:value reproschema:AdditionalNoteObj) +AnnotationAssertion(schema:domainIncludes reproschema:value reproschema:UnitOption) +AnnotationAssertion(schema:rangeIncludes reproschema:value schema:Boolean) +AnnotationAssertion(schema:rangeIncludes reproschema:value schema:Number) +AnnotationAssertion(schema:rangeIncludes reproschema:value schema:StructuredValue) +AnnotationAssertion(schema:rangeIncludes reproschema:value schema:Text) +AnnotationAssertion(schema:rangeIncludes reproschema:value schema:URL) +AnnotationAssertion(schema:sameAs reproschema:value schema:value) +AnnotationAssertion(rdfs:comment reproschema:value "The value for each option in choices or in additionalNotesObj") +AnnotationAssertion(rdfs:label reproschema:value "value") +AnnotationAssertion(schema:domainIncludes reproschema:valueType reproschema:ResponseOption) +AnnotationAssertion(schema:rangeIncludes reproschema:valueType schema:Text) +AnnotationAssertion(schema:rangeIncludes reproschema:valueType rdf:langString) +AnnotationAssertion(rdfs:comment reproschema:valueType "The type of the response of an item. For example, string, integer, etc.") +AnnotationAssertion(rdfs:label reproschema:valueType "The type of the response") +AnnotationAssertion(schema:domainIncludes reproschema:variableName reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes reproschema:variableName reproschema:ComputeSpecification) +AnnotationAssertion(schema:domainIncludes reproschema:variableName reproschema:OverrideProperty) +AnnotationAssertion(schema:rangeIncludes reproschema:variableName schema:Text) +AnnotationAssertion(rdfs:comment reproschema:variableName "The name used to represent an item.") +AnnotationAssertion(rdfs:label reproschema:variableName "variableName") +AnnotationAssertion(schema:domainIncludes skos:altLabel reproschema:Activity) +AnnotationAssertion(schema:domainIncludes skos:altLabel reproschema:Field) +AnnotationAssertion(schema:domainIncludes skos:altLabel reproschema:Protocol) +AnnotationAssertion(schema:rangeIncludes skos:altLabel schema:Text) +AnnotationAssertion(rdfs:comment skos:altLabel "The alternate label.") +AnnotationAssertion(rdfs:label skos:altLabel "alternate label") +AnnotationAssertion(schema:domainIncludes skos:prefLabel reproschema:Activity) +AnnotationAssertion(schema:domainIncludes skos:prefLabel reproschema:AdditionalProperty) +AnnotationAssertion(schema:domainIncludes skos:prefLabel reproschema:Field) +AnnotationAssertion(schema:domainIncludes skos:prefLabel reproschema:OverrideProperty) +AnnotationAssertion(schema:domainIncludes skos:prefLabel reproschema:Protocol) +AnnotationAssertion(schema:domainIncludes skos:prefLabel reproschema:UnitOption) +AnnotationAssertion(schema:rangeIncludes skos:prefLabel schema:Text) +AnnotationAssertion(rdfs:comment skos:prefLabel "The preferred label.") +AnnotationAssertion(rdfs:label skos:prefLabel "preferred label") +AnnotationAssertion(schema:domainIncludes prov:endedAtTime reproschema:ResponseActivity) +AnnotationAssertion(schema:domainIncludes prov:generated reproschema:ResponseActivity) +AnnotationAssertion(schema:domainIncludes prov:startedAtTime reproschema:ResponseActivity) +AnnotationAssertion(schema:domainIncludes prov:used reproschema:ResponseActivity) +AnnotationAssertion(schema:domainIncludes prov:wasAttributedTo reproschema:Response) +AnnotationAssertion(schema:rangeIncludes prov:wasAttributedTo reproschema:Participant) +) \ No newline at end of file diff --git a/tests/resources/reproschema.ttl b/tests/resources/reproschema.ttl new file mode 100644 index 0000000..29ccea7 --- /dev/null +++ b/tests/resources/reproschema.ttl @@ -0,0 +1,436 @@ +@prefix nidm: . +@prefix prov: . +@prefix rdf: . +@prefix rdfs: . +@prefix reproschema: . +@prefix schema: . +@prefix skos: . + +reproschema:Activity a nidm:Assessment, + rdfs:Class, + prov:Entity, + prov:Plan ; + rdfs:label "Activity" ; + rdfs:comment "An assessment in a protocol." ; + rdfs:subClassOf schema:CreativeWork . + +reproschema:AdditionalNoteObj a rdfs:Class ; + rdfs:label "Additional Notes Object" ; + rdfs:comment "A set of objects to define notes in a field. For example, most Redcap and NDA data dictionaries have notes for each item which needs to be captured in reproschema" . + +reproschema:AdditionalProperty a rdfs:Class ; + rdfs:label "Additional properties" ; + rdfs:comment "An object to describe the various properties added to assessments and fields." . + +reproschema:AllowExport a rdfs:Class ; + rdfs:label "Allow export" ; + rdfs:comment "Indicates (by boolean) if data can be exported or not." . + +reproschema:AllowReplay a rdfs:Class ; + rdfs:label "Allow replay" ; + rdfs:comment "Indicates (by boolean) if items can be replayed or not." . + +reproschema:AutoAdvance a rdfs:Class ; + rdfs:label "Auto advance" ; + rdfs:comment "Indicates (by boolean) if assessments in a protocol can auto advance or not." . + +reproschema:Choice a rdfs:Class ; + rdfs:label "Response choice" ; + rdfs:comment "An object to describe a response option." . + +reproschema:ComputeSpecification a rdfs:Class ; + rdfs:label "Compute Specification" ; + rdfs:comment "An object to define computations in an activity or protocol." . + +reproschema:DisableBack a rdfs:Class ; + rdfs:label "Disable redo" ; + rdfs:comment "Indicates (by boolean) if we can go back to a completed assessment in a protocol." . + +reproschema:DontKnow a rdfs:Class ; + rdfs:label "Do not know" ; + rdfs:comment "An element to describe the choice when response is not known." . + +reproschema:Field a nidm:DataElement, + rdfs:Class, + prov:Entity ; + rdfs:label "Field" ; + rdfs:comment "An item in an assessment." ; + rdfs:subClassOf schema:CreativeWork . + +reproschema:MessageSpecification a rdfs:Class ; + rdfs:label "Message Specification" ; + rdfs:comment "An object to define messages in an activity or protocol." . + +reproschema:OverrideProperty a rdfs:Class ; + rdfs:label "Additional properties" ; + rdfs:comment "An object to override the various properties added to assessments and fields." . + +reproschema:Participant a rdfs:Class, + prov:Person ; + rdfs:label "Participant" ; + rdfs:comment "An Agent describing characteristics associated with a participant." ; + rdfs:subClassOf prov:Agent . + +reproschema:Protocol a rdfs:Class, + prov:Entity, + prov:Plan ; + rdfs:label "Protocol" ; + rdfs:comment "A representation of a study which comprises one or more assessments." ; + rdfs:subClassOf schema:CreativeWork . + +reproschema:Response a rdfs:Class, + prov:Entity ; + rdfs:label "Response" ; + rdfs:comment "Describes the response of an item." ; + rdfs:subClassOf schema:CreativeWork . + +reproschema:ResponseActivity a rdfs:Class, + prov:Activity ; + rdfs:label "ResponseActivity" ; + rdfs:comment "Captures information about some action that took place. It also links to information (entities) that were used during the activity" ; + rdfs:subClassOf schema:CreativeWork . + +reproschema:ResponseOption a rdfs:Class ; + rdfs:label "Response option" ; + rdfs:comment "An element (object or by URL)to describe the properties of response of the Field item." . + +reproschema:Skipped a rdfs:Class ; + rdfs:label "Skipped" ; + rdfs:comment "An element to describe the choice when the item is skipped." . + +reproschema:SoftwareAgent a rdfs:Class, + prov:SoftwareAgent ; + rdfs:label "Software Agent" ; + rdfs:comment "Captures information about some action that took place. It also links to information (entities) that were used during the activity" . + +reproschema:TimedOut a rdfs:Class ; + rdfs:label "Response timed out" ; + rdfs:comment "A boolean element to describe if the response did not occur within the prescribed time." . + +reproschema:UnitOption a rdfs:Class ; + rdfs:label "Unit options" ; + rdfs:comment "An object to represent a human displayable name alongside the more formal value for units." . + +nidm:subject_id rdfs:label "Participant identifier" ; + schema:domainIncludes reproschema:Participant ; + rdfs:comment "The identifier of a participant" . + +schema:about a rdf:Property ; + schema:domainIncludes reproschema:Activity, + reproschema:Field, + reproschema:Protocol ; + rdfs:comment "The subject matter of the Field." . + +schema:associatedMedia a rdf:Property ; + rdfs:label "associatedMedia" ; + schema:domainIncludes reproschema:Activity, + reproschema:Field, + reproschema:Protocol ; + rdfs:comment "A media object that encodes this CreativeWork. This property is a synonym for encoding." . + +schema:citation schema:domainIncludes reproschema:Activity . + +schema:description schema:domainIncludes reproschema:Activity, + reproschema:Field, + reproschema:Protocol . + +schema:image a rdf:Property ; + rdfs:label "image" ; + schema:domainIncludes reproschema:Choice, + reproschema:Field ; + rdfs:comment "An image of the item. This can be a URL or a fully described ImageObject." . + +schema:inLanguage schema:domainIncludes reproschema:ResponseActivity . + +schema:isPartOf a rdf:Property ; + schema:domainIncludes reproschema:Field ; + schema:rangeIncludes reproschema:Activity . + +schema:maxValue schema:domainIncludes reproschema:ResponseOption . + +schema:minValue schema:domainIncludes reproschema:ResponseOption . + +schema:name schema:domainIncludes reproschema:Choice . + +schema:question a rdf:Property ; + schema:domainIncludes reproschema:Field . + +schema:readonlyValue a rdf:Property ; + schema:domainIncludes reproschema:Field . + +schema:schemaVersion a rdf:Property ; + schema:domainIncludes reproschema:Activity, + reproschema:Field, + reproschema:Protocol . + +schema:url schema:domainIncludes reproschema:SoftwareAgent . + +schema:valueRequired schema:domainIncludes reproschema:AdditionalProperty, + reproschema:OverrideProperty . + +schema:version a rdf:Property ; + schema:domainIncludes reproschema:Activity, + reproschema:Field, + reproschema:Protocol, + reproschema:SoftwareAgent . + +reproschema:addProperties a rdf:Property ; + rdfs:label "addProperties" ; + schema:domainIncludes reproschema:Activity, + reproschema:Protocol ; + schema:rangeIncludes reproschema:AdditionalProperty ; + rdfs:comment "An array of objects to describe the various properties added to assessments and fields." . + +reproschema:additionalNotesObj a rdf:Property ; + rdfs:label "additional notes" ; + schema:domainIncludes reproschema:Field ; + schema:rangeIncludes reproschema:AdditionalNoteObj ; + rdfs:comment "A set of objects to define notes in a field. For example, most Redcap and NDA data dictionaries have notes for each item which needs to be captured in reproschema." . + +reproschema:allow a rdf:Property ; + rdfs:label "allow" ; + schema:domainIncludes reproschema:Activity, + reproschema:Protocol ; + schema:rangeIncludes schema:Thing ; + rdfs:comment "An array of items indicating properties allowed on an activity or protocol " . + +reproschema:choices a rdf:Property ; + rdfs:label "choices" ; + schema:domainIncludes reproschema:ResponseOption ; + schema:rangeIncludes schema:URL, + reproschema:Choice ; + schema:sameAs schema:itemListElement ; + rdfs:comment "An array to list the available options for response of the Field item." . + +reproschema:column a rdf:Property ; + rdfs:label "column" ; + schema:domainIncludes reproschema:AdditionalNoteObj ; + schema:rangeIncludes rdf:langString ; + rdfs:comment "An element to define the column name where the note was taken from." . + +reproschema:compute a rdf:Property ; + rdfs:label "computation" ; + schema:domainIncludes reproschema:Activity, + reproschema:Protocol ; + schema:rangeIncludes reproschema:ComputeSpecification ; + rdfs:comment "An array of objects indicating computations in an activity or protocol and maps it to the corresponding Field item. scoring logic is a subset of all computations that could be performed and not all computations will be scoring. For example, one may want to do conversion from one unit to another. " . + +reproschema:cronTable schema:domainIncludes reproschema:Activity, + reproschema:Protocol . + +reproschema:datumType a rdf:Property ; + rdfs:label "datumType" ; + schema:domainIncludes reproschema:ResponseOption ; + schema:rangeIncludes schema:Text, + schema:URL ; + rdfs:comment "Indicates what type of datum the response is (e.g. range,count,scalar etc.) for the Field item." . + +reproschema:inputType a rdf:Property ; + rdfs:label "inputType" ; + schema:domainIncludes reproschema:Field ; + schema:rangeIncludes schema:Text ; + rdfs:comment "An element to describe the input type of a Field item." . + +reproschema:isAbout a rdf:Property ; + rdfs:label "isAbout" ; + schema:domainIncludes reproschema:AdditionalProperty, + reproschema:OverrideProperty, + reproschema:Response ; + schema:rangeIncludes reproschema:Activity, + reproschema:Field ; + rdfs:comment "A pointer to the node describing the item." . + +reproschema:isVis a rdf:Property ; + rdfs:label "visibility" ; + schema:domainIncludes reproschema:AdditionalProperty, + reproschema:OverrideProperty ; + schema:rangeIncludes schema:Boolean, + schema:Text ; + rdfs:comment "An element to describe (by boolean or conditional statement) visibility conditions of items in an assessment." . + +reproschema:jsExpression a rdf:Property ; + rdfs:label "JavaScript Expression" ; + schema:domainIncludes reproschema:ComputeSpecification, + reproschema:MessageSpecification ; + schema:rangeIncludes schema:Boolean, + schema:Text ; + rdfs:comment "A JavaScript expression for computations.", + "A JavaScript expression to compute a score from other variables." . + +reproschema:landingPage a rdf:Property ; + rdfs:label "Landing page content" ; + schema:domainIncludes reproschema:Protocol ; + schema:rangeIncludes schema:Text, + schema:URL ; + rdfs:comment "An element (by URL) to point to the protocol readme or landing page." . + +reproschema:limit a rdf:Property ; + rdfs:label "limit" ; + schema:domainIncludes reproschema:AdditionalProperty, + reproschema:OverrideProperty ; + schema:rangeIncludes schema:Text ; + rdfs:comment "An element to limit the duration (uses ISO 8601) this activity is allowed to be completed by once activity is available." . + +reproschema:maxRetakes a rdf:Property ; + rdfs:label "maxRetakes" ; + schema:domainIncludes reproschema:AdditionalProperty, + reproschema:OverrideProperty ; + schema:rangeIncludes schema:Number ; + rdfs:comment "Defines number of times the item is allowed to be redone." . + +reproschema:message a rdf:Property ; + rdfs:label "Message" ; + schema:domainIncludes reproschema:MessageSpecification ; + schema:rangeIncludes schema:Text, + rdf:langString ; + rdfs:comment "The message to be conditionally displayed for an item. " . + +reproschema:messages a rdf:Property ; + rdfs:label "messages" ; + schema:domainIncludes reproschema:Activity, + reproschema:Protocol ; + schema:rangeIncludes reproschema:MessageSpecification ; + rdfs:comment "An array of objects to define conditional messages in an activity or protocol." . + +reproschema:multipleChoice a rdf:Property ; + rdfs:label "Multiple choice response expectation" ; + schema:domainIncludes reproschema:ResponseOption ; + schema:rangeIncludes schema:Boolean ; + rdfs:comment "Indicates (by bool) if response for the Field item has one or more answer." . + +reproschema:order a rdf:Property ; + rdfs:label "Order" ; + schema:domainIncludes reproschema:Activity, + reproschema:Protocol ; + schema:rangeIncludes schema:URL, + reproschema:Activity, + reproschema:Field ; + rdfs:comment "An ordered list to describe the order in which the items of an assessment or protocol appear in the user interface." . + +reproschema:overrideProperties a rdf:Property ; + rdfs:label "overrideProperties" ; + schema:domainIncludes reproschema:Activity, + reproschema:Protocol ; + schema:rangeIncludes reproschema:OverrideProperty ; + rdfs:comment "An array of objects to override the various properties added to assessments and fields." . + +reproschema:preamble a rdf:Property ; + rdfs:label "Preamble" ; + schema:domainIncludes reproschema:Activity, + reproschema:Field ; + schema:rangeIncludes schema:Text, + rdf:langString ; + rdfs:comment "The preamble for an assessment" . + +reproschema:randomMaxDelay a rdf:Property ; + rdfs:label "randomMaxDelay" ; + schema:domainIncludes reproschema:AdditionalProperty, + reproschema:OverrideProperty ; + schema:rangeIncludes schema:Text ; + rdfs:comment "Present activity/item within some random offset of activity available time up to the maximum specified by this ISO 8601 duration" . + +reproschema:responseOptions a rdf:Property ; + rdfs:label "Response options" ; + schema:domainIncludes reproschema:Field ; + schema:rangeIncludes schema:URL, + reproschema:ResponseOption ; + rdfs:comment "An element (object or by URL)to describe the properties of response of the Field item." . + +reproschema:schedule a rdf:Property ; + rdfs:label "Schedule" ; + schema:domainIncludes reproschema:AdditionalProperty, + reproschema:OverrideProperty ; + schema:rangeIncludes schema:Schedule, + schema:Text ; + rdfs:comment "An element to set make activity available/repeat info using ISO 8601 repeating interval format." . + +reproschema:shuffle a rdf:Property ; + rdfs:label "Shuffle" ; + schema:domainIncludes reproschema:Activity, + reproschema:Protocol ; + schema:rangeIncludes schema:boolean ; + rdfs:comment "An element (bool) to determine if the list of items is shuffled or in order." . + +reproschema:source a rdf:Property ; + rdfs:label "source" ; + schema:domainIncludes reproschema:AdditionalNoteObj ; + schema:rangeIncludes rdf:langString ; + rdfs:comment "An element to define the source (eg. RedCap, NDA) where the note was taken from." . + +reproschema:statusOptions a rdf:Property ; + rdfs:label "Status options" ; + schema:rangeIncludes schema:Text ; + rdfs:comment "Provides information on whether or not a field item wants to be accompanied by the additional status option(s) defined in “statusOptions”" . + +reproschema:unitOptions a rdf:Property ; + rdfs:label "unitOptions" ; + schema:domainIncludes reproschema:ResponseOption ; + schema:rangeIncludes reproschema:UnitOption ; + rdfs:comment "A list of objects to represent a human displayable name alongside the more formal value for units." . + +reproschema:value a rdf:Property ; + rdfs:label "value" ; + schema:domainIncludes reproschema:AdditionalNoteObj, + reproschema:UnitOption ; + schema:rangeIncludes schema:Boolean, + schema:Number, + schema:StructuredValue, + schema:Text, + schema:URL ; + schema:sameAs schema:value ; + rdfs:comment "The value for each option in choices or in additionalNotesObj" . + +reproschema:valueType a rdf:Property ; + rdfs:label "The type of the response" ; + schema:domainIncludes reproschema:ResponseOption ; + schema:rangeIncludes schema:Text, + rdf:langString ; + rdfs:comment "The type of the response of an item. For example, string, integer, etc." . + +reproschema:variableName a rdf:Property ; + rdfs:label "variableName" ; + schema:domainIncludes reproschema:AdditionalProperty, + reproschema:ComputeSpecification, + reproschema:OverrideProperty ; + schema:rangeIncludes schema:Text ; + rdfs:comment "The name used to represent an item." . + +skos:altLabel a rdf:Property ; + rdfs:label "alternate label" ; + schema:domainIncludes reproschema:Activity, + reproschema:Field, + reproschema:Protocol ; + schema:rangeIncludes schema:Text ; + rdfs:comment "The alternate label." . + +skos:prefLabel a rdf:Property ; + rdfs:label "preferred label" ; + schema:domainIncludes reproschema:Activity, + reproschema:AdditionalProperty, + reproschema:Field, + reproschema:OverrideProperty, + reproschema:Protocol, + reproschema:UnitOption ; + schema:rangeIncludes schema:Text ; + rdfs:comment "The preferred label." . + +prov:endedAtTime schema:domainIncludes reproschema:ResponseActivity . + +prov:generated schema:domainIncludes reproschema:ResponseActivity . + +prov:startedAtTime schema:domainIncludes reproschema:ResponseActivity . + +prov:used schema:domainIncludes reproschema:ResponseActivity . + +prov:wasAttributedTo schema:domainIncludes reproschema:Response ; + schema:rangeIncludes reproschema:Participant . + +schema:value schema:domainIncludes reproschema:Choice, + reproschema:Response ; + schema:rangeIncludes schema:Boolean, + schema:Number, + schema:StructuredValue, + schema:Text, + schema:URL, + reproschema:DontKnow, + reproschema:Skipped . diff --git a/tests/test_importers/test_owl_importer.py b/tests/test_importers/test_owl_importer.py index d6e392a..afc958a 100644 --- a/tests/test_importers/test_owl_importer.py +++ b/tests/test_importers/test_owl_importer.py @@ -17,10 +17,10 @@ OUTSCHEMA_ENHANCED = os.path.join(OUTPUT_DIR, 'prov-from-owl.enhanced.yaml') class TestOwlImporter(unittest.TestCase): - """PROV """ + """Tests OWL conversion """ def test_from_owl(self): - """Test OWL conversion.""" + """Test OWL conversion on reproschema.""" oie = OwlImportEngine() schema = oie.convert(PROV, name='prov') write_schema(schema, OUTSCHEMA) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py new file mode 100644 index 0000000..8bc264b --- /dev/null +++ b/tests/test_importers/test_rdfs_importer.py @@ -0,0 +1,31 @@ +# -*- coding: utf-8 -*- + +"""Test the module can be imported.""" + +import unittest +import os +import yaml +from schema_automator.importers.owl_import_engine import OwlImportEngine +from linkml.generators.yamlgen import YAMLGenerator +from schema_automator.importers.rdfs_import_engine import RdfsImportEngine + +from schema_automator.utils.schemautils import write_schema +from tests import INPUT_DIR, OUTPUT_DIR + +REPRO = os.path.join(INPUT_DIR, 'reproschema.ttl') +OUTSCHEMA = os.path.join(OUTPUT_DIR, 'reproschema-from-ttl.yaml') + + +class TestRdfsImporter(unittest.TestCase): + """tests importing rdf schema """ + + def test_from_rdfs(self): + """Test OWL conversion.""" + oie = RdfsImportEngine() + schema = oie.convert(REPRO, default_prefix='reproschema', identifier='id') + write_schema(schema, OUTSCHEMA) + # roundtrip + s = YAMLGenerator(OUTSCHEMA).serialize() + print(s[0:100]) + + From 5347c8e80391439f42d26986680916c8fdb32856 Mon Sep 17 00:00:00 2001 From: "Mark A. Miller" Date: Mon, 8 May 2023 15:11:29 -0400 Subject: [PATCH 03/88] Delete pre_poetry directory (#116) --- pre_poetry/Makefile | 122 ----- pre_poetry/README.md | 1 - pre_poetry/enum_annotator.md | 158 ------ pre_poetry/enum_annotator.py | 370 -------------- pre_poetry/environment.sh | 4 - pre_poetry/ols_search_wrapper.py | 158 ------ pre_poetry/synbio_organism_mapped.yaml | 676 ------------------------- 7 files changed, 1489 deletions(-) delete mode 100644 pre_poetry/Makefile delete mode 100644 pre_poetry/README.md delete mode 100644 pre_poetry/enum_annotator.md delete mode 100755 pre_poetry/enum_annotator.py delete mode 100755 pre_poetry/environment.sh delete mode 100644 pre_poetry/ols_search_wrapper.py delete mode 100644 pre_poetry/synbio_organism_mapped.yaml diff --git a/pre_poetry/Makefile b/pre_poetry/Makefile deleted file mode 100644 index 7fecd7a..0000000 --- a/pre_poetry/Makefile +++ /dev/null @@ -1,122 +0,0 @@ -#!/usr/bin/env python - -export PYTHONPATH=. -.PHONY: data/felix_modifications.tsv -.PHONY: clean - -# .PHONY: inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml - -# https://docs.google.com/spreadsheets/d/1VFeUZqLmnmXDS1JcyXQbMgF513WyUBgz/edit#gid=1742629071 - -test: - pytest tests/test_*py - -unit-tests: - pytest tests/unit/*.py - -integration-tests: - pytest tests/*.py - -typecheck: - mypy kgx --ignore-missing-imports - -schema_automator/dosdp/model.py: schema_automator/dosdp/dosdp_linkml.yaml - gen-python $< > $@ && python -m schema_automator.dosdp.model - -inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml: - schema_automator/infer_model.py \ - tsv2model \ - -E species \ - data/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.tsv > \ - inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml - -# samples of mapping enumerables to semantic terms via BioPortal -target/species_enum_ncbitaxon.yaml: inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml - schema_automator/bioportal-enum-annotation.py \ - --modelfile inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml \ - --enum_source species_enum \ - --ontoprefix ncbitaxon > target/species_enum_ncbitaxon.yaml - -target/species_enum_all_bp.yaml: inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml - schema_automator/bioportal-enum-annotation.py \ - --modelfile inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml \ - --enum_source species_enum > \ - target/species_enum_all_bp.yaml - -target/type_enum_so.yaml: inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml - schema_automator/bioportal-enum-annotation.py \ - --modelfile inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml \ - --enum_source type_enum \ - --ontoprefix so > \ - target/type_enum_so.yaml - -data/felix_modifications.tsv: - schema_automator/get_felix_tsv.py - -inferred-models/felix_modifications.yaml: data/felix_modifications.tsv - schema_automator/infer_model.py \ - tsv2model \ - data/felix_modifications.tsv > \ - inferred-models/felix_modifications.yaml - -target/felix_modifications_modification_type_enum_so.yaml: inferred-models/felix_modifications.yaml - schema_automator/bioportal-enum-annotation.py \ - --modelfile inferred-models/felix_modifications.yaml \ - --enum_source modification_type_enum \ - --ontoprefix so > \ - target/felix_modifications_modification_type_enum_so.yaml - -copy-pfx: - find ../phenopacket-schema -name "*.proto" -exec cp {} tests/resources/phenopackets/ \; - -pfx-fix-imports: - perl -pi -ne 's@import "http://github.com/.*/@import"@' tests/resources/phenopackets/*proto - -clean: - [ ! -e inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml ] || \ - rm inferred-models/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml - [ ! -e target/species_enum_ncbitaxon.yaml ] || rm target/species_enum_ncbitaxon.yaml - [ ! -e target/species_enum_all_bp.yaml ] || rm target/species_enum_all_bp.yaml - [ ! -e target/type_enum_so.yaml ] || rm target/type_enum_so.yaml - [ ! -e target/felix_modifications.tsv ] || rm felix_modifications.tsv - [ ! -e inferred-models/felix_modifications.yaml ] || rm inferred-models/felix_modifications.yaml - [ ! -e target/felix_modifications_modification_type_enum_so.yaml ] || rm target/felix_modifications_modification_type_enum_so.yaml - -# DOCKER - -# Building docker image -VERSION = "v1.1.7" -IM=monarchinitiative/linkml -DEV=monarchinitiative/linkml-dev - -docker-build: - docker build $(CACHE) \ - -t $(IM):$(VERSION) -t $(IM):latest -t $(DEV):latest \ - . - -docker-test: - docker run -v $(PWD):/work -w /work/ --rm -ti linkml/linkml bash - - -docker-build-no-cache: - $(MAKE) build CACHE=--no-cache - -docker-build-dev: - docker build --build-arg ODK_VERSION=$(VERSION) \ - -t $(DEV):$(VERSION) -t $(DEV):latest \ - . - -docker-clean: - docker kill $(IM) || echo not running - docker rm $(IM) || echo not made - -#### Publishing ##### - -docker-publish-no-build: - docker push $(IM):latest - docker push $(IM):$(VERSION) - -docker-publish: docker-build - $(MAKE) docker-publish-no-build - - diff --git a/pre_poetry/README.md b/pre_poetry/README.md deleted file mode 100644 index ac97cd8..0000000 --- a/pre_poetry/README.md +++ /dev/null @@ -1 +0,0 @@ -placeholder for local and temporary files. on .gitignore, so not synced. diff --git a/pre_poetry/enum_annotator.md b/pre_poetry/enum_annotator.md deleted file mode 100644 index 56b581f..0000000 --- a/pre_poetry/enum_annotator.md +++ /dev/null @@ -1,158 +0,0 @@ -# `webmap_enums.py` documentation - - - -`webmap_enums.py` reads the labels of enums in a LinkML model and submits them to a web-based term mapping service. Rudimentary code for using the BioPortal annotator has been commented out as the OLS term search has be emphasized in recent development effort. - - All of the mappings are written to a TSV (`mappings_log.tsv` by default) file specified by `--tabular_outputfile` - -The enums' descriptions and meanings can be overwritten if the following two conditions are true: - -- If the cosine distance between the enum's label and the best search result's label or synonyms is less than or equal to the threshold (`--maxdist`, 0.05) -- If there was no meaning in the input, or if the `--overwite_meaning` is set - -The model is written out to `STDOUT`, whether any enums have been updated or not. - -`webmap_enums.py` should be executed from the `linkml-model-enrichment` repo's root directory. The input files mentioned in the examples below are not guaranteed to be present in a cloned `linkml-model-enrichment` repo. - -**Convert a TSV file into a LinkML YAML file** -schema_automator/infer_model.py tsv2model -E Taxon -E FAO -E Engineering tests/resources/webmap_enums.tsv > target/webmap_enums.yaml - -**Map taxon-related enums from a sample file to NCBItaxon terms, without overwriting anything** - -```bash -./schema_automator/enum_annotator.py \ ---verbosity DEBUG \ ---modelfile target/webmap_enums.yaml \ ---tabular_outputfile target/ncbitaxon_mappings_log.tsv \ ---ontoprefix ncbitaxon \ ---enum_list Taxon_enum \ ---search_engine OLS > target/ncbitaxon_mappings.yaml -``` - -*That takes a little less than 2 minutes for 26 enum lables, on a 2020 Intel MacBook Pro with a 200 Mbps network connection. `webmap_enums.py` has not been optimized for speed in any way. The greatest time cost appears to come from waiting for responses from the search engine. While the BioPortal annotator indicates which portion of the enum label was matched to which property of the matched terms as part of the search itself, retrieving the same information from OLS requires retrieving the term details for each matched term. One example of a potential improvement to `webmap_enums.py` would be caching search results so that similar labels would not be submitted multiple times.* - -*The OLS search may be retrieving proper mappings for* Lentivirus.human-immunodeficiency-virus1 (Human immunodeficiency virus 1, NCBITaxon:11676) *and* Nepovirus.Tobacco-ringspot-virus (Tobacco ringspot virus, NCBITaxon:12282), *but terms that combine a genus and a species are handled in any special way, so that is a vulnerability at this time.* - -*In the default configuration,* Simian virus 40 *is incorrectly mapped to* Simian virus 41, NCBITaxon:2560766. NCBITaxon:1891767 'Macaca mulatta polyomavirus 1' is probably the correct mapping, with equivalent name 'Simian virus 40'. NCBITaxon:10633 is an alternative ID. I have not found any configuration of `webmap_enums.py` to retrieve the correct term for this string. - -*In the default configuration, no acceptable mappings are found for the following. (The same iterative approach can help here, too.)* - -- '#N/A' - - - *No NCBItaxon mapping expected.* - -- 'Saccharomyces cerevisiae/Bacillus subtilis/Bacillus subtilis' - - - *Multiple taxa in input. No NCBItaxon mapping expected.* - -- 'herpes.simplex.virus-1' - - - NCBITaxon:10298 'Human alphaherpesvirus 1' *has the related genbank synonym* 'Herpes simplex virus 1' *and can be found by prioritizing non-label annotations with the modification* `--query_fields annotations,label` - -- 'Human influenza hemagglutinin' - - - *Taxon + protein. No NCBItaxon mapping expected* - -- 'NA' - - - *No NCBItaxon mapping expected.* - -- 'phage.lambda' - - - NCBITaxon:10710 *has the label* Escherichia virus Lambda. 'Phage lambda' *or* 'lambda phage' *are assigned to several different synonyms and annotations. This hit can be retrieved by prioritizing annotations hits over label hits with* `--query_fields annotations,label`. - -- 'Pseudomonas plasmid pVS1' - - - *The default search retrieves* NCBITaxon:219557, *labeled* 'Plasmid pVS1'. *No other relevant annotations are available, so the word 'Pseudomonas' becomes noise in the string distance calculation. Perhaps a string distance metric other than cosine would help?* - -- 'SARS-CoV-2' - - - NCBITaxon:2697049 *has the label* Severe acute respiratory syndrome coronavirus 2 *and the genbank acronym* 'SARS-CoV-2'. *This hit can be retrieved by prioritizing annotations hits over label hits with* `--query_fields annotations,label` *and by disabling the substitution of whitespace for hyphens with something like* `--replaced_chars ._` - - - -**Add Sequence Ontology mappings on top of the NCBItaxon mappings** - -```bash -./schema_automator/enum_annotator.py \ ---verbosity DEBUG \ ---modelfile target/ncbitaxon_mappings.yaml \ ---tabular_outputfile target/ncbi_so_mappings_log.tsv \ ---ontoprefix so \ ---enum_list Engineering_enum \ ---search_engine OLS > target/ncbi_so_mappings.yaml -``` - - - -**Add ENVO mappings for MIxS soil types** - -```bash -./schema_automator/enum_annotator.py \ ---verbosity DEBUG \ ---modelfile target/ncbi_so_mappings.yaml \ ---tabular_outputfile target/ncbi_so__envo_mappings.tsv \ ---ontoprefix envo \ ---enum_list FAO_enum \ ---search_engine OLS > target/ncbi_so__envo_mappings.yaml -``` - - - -### Options - -```bash -enum_annotator.py [OPTIONS] - - Uses web-based ontology lookup tools to map the permitted values of enums - from linkml files to CURIES. Optionally overwrites the meaning with a - CURIE and the description with a preferred label. Writes the resulting - YAML to STDOUT. - -Options: - -v, --verbosity LVL Either CRITICAL, ERROR, WARNING, INFO or - DEBUG - - -f, --modelfile PATH Path to a YAML linkml file containing - enumerated values. [required] - - -t, --tabular_outputfile PATH A tsv dump of all search results will be - written to this file. [default: - mappings_log.tsv] - - -p, --ontoprefix TEXT comma-separated list of (abbreviated) - ontologies to search over. [default: - NCBITaxon,SO,ENVO,PATO,GO,OBI] - - -e, --enum_list TEXT Comma-separated list of enums to search - with. Defaults to all enums. - - -q, --query_fields TEXT Comma-separated list of term properties to - include in string similarity calculation. - Defaults to label,synonym,description,short_ - form,obo_id,annotations,logical_description, - iri. - - -c, --replaced_chars TEXT Characters to replace with whitespace. - [default: \.\_\- ] - - -n, --min_search_chars INTEGER TEMPORARILY DISABLED. Queries with fewer - characters will not be submitted in the - search. [default: 2] - - -r, --row_req INTEGER Requested number of search results. - [default: 5] - - -x, --maxdist FLOAT Maximum string distance between query and - best matching term's best matching property. - [default: 0.05] - - -m, --overwite_meaning Should existing enum meanings and - descriptions be overwritten? - - -s, --search_engine TEXT BioPortal option has been temporarily - disabled. [default: OLS] - - --help Show this message and exit. -``` diff --git a/pre_poetry/enum_annotator.py b/pre_poetry/enum_annotator.py deleted file mode 100755 index 10c408f..0000000 --- a/pre_poetry/enum_annotator.py +++ /dev/null @@ -1,370 +0,0 @@ -#!/usr/bin/env python3 - -from __future__ import print_function -import json -import sys -import urllib.error -import urllib.parse -import urllib.request -from strsimpy.cosine import Cosine -import yaml -import re -import pandas as pds -import requests -import click -import logging -import click_log -import random - -logger = logging.getLogger(__name__) -click_log.basic_config(logger) -pds.set_option('display.expand_frame_repr', False) - -global inferred_model, ecg, opg, rrg, qfg, mdg, omg -ecg = None -failures = [] - -cols2display = ['enum_class', 'orig_enum', 'query', 'obo_id', 'pref_lab', - 'name', 'cosine_dist', 'dist_ok', 'type', 'scope', 'rank'] - -success_frame = pds.DataFrame(columns=cols2display) - - -# MIN CHARACTERS FOR SEARCH NOT BEING ENFORCED - -# TODO write mapped terms back in as meanings -# give option for overwriting? -# TODO all user to specify enum classes to process -# when verbose, stderr gets status and debugging info -# stdout gets the modified model as yaml and should be redirected to a file - -# OLS dataframe structure not identical to previous BP dataframes: -# different columns -# BP shows one best row -# OLS lists up to N best -# not filtering out small queries in OLS approach yet -# (OLS approach?) neither handling nor optimizing for repeat values -# not merging results back into model yet - -# examples of previously challenging mappings -# # bicarbonate -# # term_iri = 'https://www.ebi.ac.uk/ols/api/ontologies/chebi/terms/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCHEBI_32139' -# # fungus -# # term_iri = 'https://www.ebi.ac.uk/ols/api/ontologies/ncbitaxon/terms/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FNCBITaxon_33169' -# # sars-cov-2 -# # term_iri = 'https://www.ebi.ac.uk/ols/api/ontologies/ncbitaxon/terms/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FNCBITaxon_2697049' -# # Escherichia phage T7 -# # # http://purl.obolibrary.org/obo/NCBITaxon_10760 -# # term_iri = 'https://www.ebi.ac.uk/ols/api/ontologies/ncbitaxon/terms/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FNCBITaxon_10760' - - -def eprint(*args, **kwargs): - print(*args, file=sys.stderr, **kwargs) - - -# TODO add filter based on min_search_chars_param? -# no longer requiring a minimum search length -def one_enum_to_ols_frame_list(permitteds, one_enum_param): - global failures - global success_frame - - per_enum_frame = pds.DataFrame(columns=cols2display) - - for orig_enum in permitteds: - - temp = one_enum_param + ": " + orig_enum - logger.info(temp) - - # tidied_enum = re.sub(r'[_,.\-;@#?!&$ ]+', ' ', orig_enum) - if ecg is not None: - tidied_enum = re.sub(r'[' + ecg + ']+', ' ', orig_enum) - - ontologies_phrase = '' - if len(opg) > 1: - ontologies_phrase = 'ontology=' + opg.lower() - - qf_phrase = '' - if len(qfg) > 1: - qf_phrase = 'queryFields=' + qfg.lower() - - # requiring local loses EROs annotations of SV40 - # 'local=true' + '&' + \ - request_string = 'http://www.ebi.ac.uk/ols/api/search?q=' + \ - urllib.parse.quote(tidied_enum) + '&' + \ - 'type=class' + '&' + \ - 'exact=false' + '&' + \ - ontologies_phrase + "&" + \ - 'rows=' + str(rrg) + '&' + \ - qf_phrase - - logger.debug(request_string) - - response_param = requests.get(request_string) - ols_string_search_res_j = response_param.json() - ols_string_search_res_frame = pds.DataFrame(ols_string_search_res_j['response']['docs']) - ols_string_search_res_frame.insert(0, "query", tidied_enum) - - # did the string search get any result rows? - r, c = ols_string_search_res_frame.shape - if r == 0: - no_search_res_dict = {'description': '', 'id': orig_enum, 'iri': '', 'is_defining_ontology': '', - 'label': '', 'obo_id': '', 'ontology_name': '', 'ontology_prefix': '', - 'short_form': '', 'type': ''} - no_search_res_frame = pds.DataFrame([no_search_res_dict]) - ols_string_search_res_frame = ols_string_search_res_frame.append(no_search_res_frame) - failures.append(orig_enum) - - ols_string_search_res_frame['query'] = orig_enum - inner_cosine_obj = Cosine(1) - - annotations_frame = pds.DataFrame(columns=['name', 'obo_id', 'scope', 'type', 'xrefs']) - - for ols_string_search_res_row in ols_string_search_res_frame.itertuples(index=False): - once = urllib.parse.quote(ols_string_search_res_row.iri, safe='') - twice = urllib.parse.quote(once, safe='') - # build url from base - term_retr_base = 'http://www.ebi.ac.uk/ols/api/ontologies/' - term_retr_assembled = term_retr_base + ols_string_search_res_row.ontology_name + '/terms/' + twice - term_details = requests.get(term_retr_assembled) - term_json = term_details.json() - has_label = 'label' in set(term_json.keys()) - if has_label: - logger.debug(term_retr_assembled) - temp = term_json['label'] - logger.debug(temp) - label_frame = pds.DataFrame([[term_json['label'], 'label', 'label', '']], - columns=['name', 'scope', 'type', 'xrefs']) - label_frame['obo_id'] = term_json['obo_id'] - label_frame['pref_lab'] = term_json['label'] - annotations_frame = annotations_frame.append(label_frame, ignore_index=True) - # also get other properties? - - has_synonyms = 'obo_synonym' in set(term_json.keys()) - if has_synonyms: - obo_syn_json = term_json['obo_synonym'] - obo_syn_frame = pds.DataFrame(obo_syn_json) - obo_syn_frame['obo_id'] = term_json['obo_id'] - obo_syn_frame['pref_lab'] = term_json['label'] - annotations_frame = annotations_frame.append(obo_syn_frame, ignore_index=True) - - # # don't process every kind of annotation, like genetic code - # has_annotations = 'annotation' in set(term_json.keys()) - # if has_annotations: - # obo_ano_json = term_json['annotation'] - # for anokey in obo_ano_json.keys(): - # for keyval in obo_ano_json[anokey]: - # new_row = {'name': keyval, - # 'obo_id': term_json['obo_id'], - # 'scope': anokey, - # 'type': 'annotation', - # 'xrefs': '', - # 'pref_lab': term_json['label']} - # annotations_frame = annotations_frame.append(new_row, ignore_index=True) - - annotations_row_count = len(annotations_frame.index) - - if annotations_row_count == 0: - logger.warning('NO ANNOTATIONS') - manual_row = pds.Series(['', '', '', '', '', '']) - row_df = pds.DataFrame([manual_row], columns=['name', 'obo_id', 'scope', 'type', 'xrefs', 'pref_lab']) - annotations_frame = pds.concat([row_df, annotations_frame], ignore_index=True) - failures.append(orig_enum) - annotations_frame['enum_class'] = one_enum_param - annotations_frame['query'] = tidied_enum - annotations_frame['orig_enum'] = orig_enum - # check whether anny of the annotation on any of the hits have an - # acceptable cosine string distance - annotations_frame['name'] = annotations_frame['name'].fillna('') - annotations_frame['cosine_dist'] = \ - annotations_frame.apply(lambda row: inner_cosine_obj.distance(tidied_enum.strip().lower(), - row['name'].strip().lower()), - axis=1) - annotations_frame = annotations_frame.sort_values('cosine_dist') - annotations_frame['dist_ok'] = annotations_frame['cosine_dist'] <= mdg - annotations_frame['rank'] = list(range(1, len(annotations_frame.index)+1)) - - # annotations_frame = annotations_frame[ - # ['enum_class', 'orig_enum', 'query', 'name', 'cosine_dist', 'dist_ok', - # 'obo_id', 'pref_lab', 'type', 'scope']] - - annotations_frame = annotations_frame[cols2display] - - # do something with xrefs? - logger.debug(annotations_frame) - - # get best acceptable row - acceptable_cosine = annotations_frame[annotations_frame['cosine_dist'] <= mdg] - acceptable_row_count = len(acceptable_cosine.index) - if acceptable_row_count > 0: - best_acceptable = acceptable_cosine.iloc[0] - success_frame = success_frame.append(best_acceptable) - # check if permitted value already has a meaning - meaning_search = list(inferred_model['enums'][one_enum_param]['permissible_values'][orig_enum].keys()) - if 'meaning' in meaning_search: - has_meaning = True - else: - has_meaning = False - meaningless = not has_meaning - if meaningless or omg: - # insert meaning - inferred_model['enums'][one_enum_param]['permissible_values'][orig_enum]['meaning'] = best_acceptable[ - 'obo_id'] - inferred_model['enums'][one_enum_param]['permissible_values'][orig_enum]['description'] = \ - best_acceptable['pref_lab'] - else: - temp = 'NO ACCEPTABLE MAPPINGS FOR ' + one_enum_param + " " + orig_enum - logger.warning(temp) - # sort and make unique - failures.append(orig_enum) - per_enum_frame = per_enum_frame.append(annotations_frame) - # I think there will be one success frame for each enum - success_frame = success_frame[cols2display] - success_frame = success_frame[list(annotations_frame.columns)] - logger.info(success_frame) - return per_enum_frame - - -def all_enums_to_ols(inferred_model_param, the_enums_param): - multi_enum_frame = pds.DataFrame(columns=cols2display) - for one_enum in the_enums_param: - permitteds = get_one_enum_class(inferred_model_param, one_enum) - one_enum_class_list = one_enum_to_ols_frame_list(permitteds, one_enum) - multi_enum_frame = multi_enum_frame.append(one_enum_class_list) - return multi_enum_frame - - -def get_one_enum_class(inferred_model_param, enum_class_param): - inferred_enums = inferred_model_param['enums'][enum_class_param]['permissible_values'] - inferred_keys = list(inferred_enums.keys()) - inferred_keys.sort(key=str.casefold) - return inferred_keys - - -def get_enum_list(inferred_model_param): - inner_enums = list(inferred_model_param['enums'].keys()) - return inner_enums - - -def case_fold_list_sort(input_list): - output_list = input_list - output_list.sort(key=str.casefold) - return output_list - - -def read_yaml_model(modelfile_param): - with open(modelfile_param) as file: - inner_inferred_model = yaml.load(file, Loader=yaml.FullLoader) - return inner_inferred_model - - -# don't forget type field on options ??? -# synbio example (without redirection of yaml stdout): -# ./schema_automator/mixs_qd_bp_or_ols.py \ -# --modelfile target/Ontology_example_20210317_P2B1_allmods_categorytype_different_scores_per_mod-1.yaml \ -# --ontoprefix NCBItaxon,SO \ -# --enum_list species_enum,host_organism_enum,category_enum,type_enum,type_long_enum \ -# --verbose -@click.command() -@click_log.simple_verbosity_option(logger) -@click.option('--modelfile', '-f', - help='Path to a YAML linkml file containing enumerated values.', - required=True, - type=click.Path(exists=True), - ) -@click.option('--tabular_outputfile', '-t', - default='mappings_log.tsv', - help='A tsv dump of all search results will be written to this file.', - show_default=True, - type=click.Path() - ) -@click.option('--ontoprefix', '-p', - default='NCBITaxon,SO,ENVO,PATO,GO,OBI', - help='comma-separated list of (abbreviated) ontologies to search over.', - show_default=True - ) -@click.option('--enum_list', '-e', - default='', - help='Comma-separated list of enums to search with. Defaults to all enums.', - show_default=False - ) -# the choice and order of the query_fields has a big impact on what terms are returned -# overwrite the model's description with preferred term? -# OLS defaults are {label, synonym, description, short_form, obo_id, annotations, logical_description, iri} -@click.option('--query_fields', '-q', - default='', - help="Comma-separated list of term properties to include in string similarity calculation. " + - "Defaults to label,synonym,description,short_form,obo_id,annotations,logical_description,iri.", - show_default=False - ) -# replaced_chars impacts returned fields too -# 'SARS-CoV-2' fails if the hyphens are escaped or ??? -@click.option('--replaced_chars', '-c', - default='\.\_\- ', - help='Characters to replace with whitespace.', - show_default=True - ) -@click.option('--min_search_chars', '-n', - default=2, - help='TEMPORARILY DISABLED. Queries with fewer characters will not be submitted in the search.', - show_default=True - ) -@click.option('--row_req', '-r', - default=5, - help='Requested number of search results.', - show_default=True - ) -@click.option('--maxdist', '-x', - default=0.05, - help="Maximum string distance between query and best matching term's best matching property.", - show_default=True - ) -@click.option('--overwite_meaning', '-m', - help="Should existing enum meanings and descriptions be overwritten?", - is_flag=True - ) -@click.option('--search_engine', '-s', - default='OLS', - help="BioPortal option has been temporarily disabled.", - show_default=True - ) -def clickmain(modelfile, tabular_outputfile, ontoprefix, enum_list, query_fields, replaced_chars, min_search_chars, - row_req, maxdist, overwite_meaning, search_engine): - """Uses web-based ontology lookup tools to map the permitted values of enums from linkml files to CURIES. - Optionally overwrites the meaning with a CURIE and the description with a preferred label. - Writes the resulting YAML to STDOUT.""" - global failures, inferred_model, ecg, opg, rrg, qfg, mdg, omg - - inferred_model = read_yaml_model(modelfile) - ecg = replaced_chars - opg = ontoprefix - rrg = row_req - qfg = query_fields - mdg = maxdist - omg = overwite_meaning - - requested_enums = enum_list.split(",") - sorted_requested = case_fold_list_sort(requested_enums) - avaialble_enums = get_enum_list(inferred_model) - sorted_avaialble = case_fold_list_sort(avaialble_enums) - logger.info(sorted_avaialble) - - if len(enum_list) == 0 or len(enum_list[0]) == 0: - settled_enums = sorted_avaialble - else: - settled_enums = sorted_requested - - if search_engine == 'OLS': - all_ols_results = all_enums_to_ols(inferred_model, settled_enums) - logger.info("MAPPING FAILURES") - logger.info(list(set(failures))) - all_ols_results.to_csv(tabular_outputfile, sep='\t') - yaml.safe_dump(inferred_model, sys.stdout, default_flow_style=False) - elif search_engine == 'BioPortal': - logger.warning('BioPortal search temporarily disabled') - return - else: - logger.warning('No valid search engine specified') - - -if __name__ == '__main__': - clickmain(auto_envvar_prefix='ENUMENRICH') diff --git a/pre_poetry/environment.sh b/pre_poetry/environment.sh deleted file mode 100755 index 41763fb..0000000 --- a/pre_poetry/environment.sh +++ /dev/null @@ -1,4 +0,0 @@ -#!/bin/sh -python3 -m venv venv -source venv/bin/activate -export PYTHONPATH=. diff --git a/pre_poetry/ols_search_wrapper.py b/pre_poetry/ols_search_wrapper.py deleted file mode 100644 index d5025d3..0000000 --- a/pre_poetry/ols_search_wrapper.py +++ /dev/null @@ -1,158 +0,0 @@ - -def one_enum_to_ols_frame_list(permitteds, one_enum_param): - global failures - global success_frame - - per_enum_frame = pds.DataFrame(columns=cols2display) - - for orig_enum in permitteds: - - temp = one_enum_param + ": " + orig_enum - logger.info(temp) - - # tidied_enum = re.sub(r'[_,.\-;@#?!&$ ]+', ' ', orig_enum) - tidied_enum = re.sub(r'[' + ecg + ']+', ' ', orig_enum) - - ontologies_phrase = '' - if len(opg) > 1: - ontologies_phrase = 'ontology=' + opg.lower() - - qf_phrase = '' - if len(qfg) > 1: - qf_phrase = 'queryFields=' + qfg.lower() - - # requiring local loses EROs annotations of SV40 - # 'local=true' + '&' + \ - request_string = 'http://www.ebi.ac.uk/ols/api/search?q=' + \ - urllib.parse.quote(tidied_enum) + '&' + \ - 'type=class' + '&' + \ - 'exact=false' + '&' + \ - ontologies_phrase + "&" + \ - 'rows=' + str(rrg) + '&' + \ - qf_phrase - - logger.debug(request_string) - - response_param = requests.get(request_string) - ols_string_search_res_j = response_param.json() - ols_string_search_res_frame = pds.DataFrame(ols_string_search_res_j['response']['docs']) - ols_string_search_res_frame.insert(0, "query", tidied_enum) - - # did the string search get any result rows? - r, c = ols_string_search_res_frame.shape - if r == 0: - no_search_res_dict = {'description': '', 'id': orig_enum, 'iri': '', 'is_defining_ontology': '', - 'label': '', 'obo_id': '', 'ontology_name': '', 'ontology_prefix': '', - 'short_form': '', 'type': ''} - no_search_res_frame = pds.DataFrame([no_search_res_dict]) - ols_string_search_res_frame = ols_string_search_res_frame.append(no_search_res_frame) - failures.append(orig_enum) - - ols_string_search_res_frame['query'] = orig_enum - inner_cosine_obj = Cosine(1) - - annotations_frame = pds.DataFrame(columns=['name', 'obo_id', 'scope', 'type', 'xrefs']) - - for ols_string_search_res_row in ols_string_search_res_frame.itertuples(index=False): - once = urllib.parse.quote(ols_string_search_res_row.iri, safe='') - twice = urllib.parse.quote(once, safe='') - # build url from base - term_retr_base = 'http://www.ebi.ac.uk/ols/api/ontologies/' - term_retr_assembled = term_retr_base + ols_string_search_res_row.ontology_name + '/terms/' + twice - term_details = requests.get(term_retr_assembled) - term_json = term_details.json() - has_label = 'label' in set(term_json.keys()) - if has_label: - logger.debug(term_retr_assembled) - temp = term_json['label'] - logger.debug(temp) - label_frame = pds.DataFrame([[term_json['label'], 'label', 'label', '']], - columns=['name', 'scope', 'type', 'xrefs']) - label_frame['obo_id'] = term_json['obo_id'] - label_frame['pref_lab'] = term_json['label'] - annotations_frame = annotations_frame.append(label_frame, ignore_index=True) - # also get other properties? - - has_synonyms = 'obo_synonym' in set(term_json.keys()) - if has_synonyms: - obo_syn_json = term_json['obo_synonym'] - obo_syn_frame = pds.DataFrame(obo_syn_json) - obo_syn_frame['obo_id'] = term_json['obo_id'] - obo_syn_frame['pref_lab'] = term_json['label'] - annotations_frame = annotations_frame.append(obo_syn_frame, ignore_index=True) - - # # don't process every kind of annotation, like genetic code - # has_annotations = 'annotation' in set(term_json.keys()) - # if has_annotations: - # obo_ano_json = term_json['annotation'] - # for anokey in obo_ano_json.keys(): - # for keyval in obo_ano_json[anokey]: - # new_row = {'name': keyval, - # 'obo_id': term_json['obo_id'], - # 'scope': anokey, - # 'type': 'annotation', - # 'xrefs': '', - # 'pref_lab': term_json['label']} - # annotations_frame = annotations_frame.append(new_row, ignore_index=True) - - annotations_row_count = len(annotations_frame.index) - - if annotations_row_count == 0: - logger.warning('NO ANNOTATIONS') - manual_row = pds.Series(['', '', '', '', '', '']) - row_df = pds.DataFrame([manual_row], columns=['name', 'obo_id', 'scope', 'type', 'xrefs', 'pref_lab']) - annotations_frame = pds.concat([row_df, annotations_frame], ignore_index=True) - failures.append(orig_enum) - annotations_frame['enum_class'] = one_enum_param - annotations_frame['query'] = tidied_enum - annotations_frame['orig_enum'] = orig_enum - # check whether anny of the annotation on any of the hits have an - # acceptable cosine string distance - annotations_frame['name'] = annotations_frame['name'].fillna('') - annotations_frame['cosine_dist'] = \ - annotations_frame.apply(lambda row: inner_cosine_obj.distance(tidied_enum.strip().lower(), - row['name'].strip().lower()), - axis=1) - annotations_frame = annotations_frame.sort_values('cosine_dist') - annotations_frame['dist_ok'] = annotations_frame['cosine_dist'] <= mdg - annotations_frame['rank'] = list(range(1, len(annotations_frame.index)+1)) - - # annotations_frame = annotations_frame[ - # ['enum_class', 'orig_enum', 'query', 'name', 'cosine_dist', 'dist_ok', - # 'obo_id', 'pref_lab', 'type', 'scope']] - - annotations_frame = annotations_frame[cols2display] - - # do something with xrefs? - logger.debug(annotations_frame) - - # get best acceptable row - acceptable_cosine = annotations_frame[annotations_frame['cosine_dist'] <= mdg] - acceptable_row_count = len(acceptable_cosine.index) - if acceptable_row_count > 0: - best_acceptable = acceptable_cosine.iloc[0] - success_frame = success_frame.append(best_acceptable) - # check if permitted value already has a meaning - meaning_search = list(inferred_model['enums'][one_enum_param]['permissible_values'][orig_enum].keys()) - if 'meaning' in meaning_search: - has_meaning = True - else: - has_meaning = False - meaningless = not has_meaning - if meaningless or omg: - # insert meaning - inferred_model['enums'][one_enum_param]['permissible_values'][orig_enum]['meaning'] = best_acceptable[ - 'obo_id'] - inferred_model['enums'][one_enum_param]['permissible_values'][orig_enum]['description'] = \ - best_acceptable['pref_lab'] - else: - temp = 'NO ACCEPTABLE MAPPINGS FOR ' + one_enum_param + " " + orig_enum - logger.warning(temp) - # sort and make unique - failures.append(orig_enum) - per_enum_frame = per_enum_frame.append(annotations_frame) - # I think there will be one success frame for each enum - success_frame = success_frame[cols2display] - success_frame = success_frame[list(annotations_frame.columns)] - logger.info(success_frame) - return per_enum_frame diff --git a/pre_poetry/synbio_organism_mapped.yaml b/pre_poetry/synbio_organism_mapped.yaml deleted file mode 100644 index 16121ed..0000000 --- a/pre_poetry/synbio_organism_mapped.yaml +++ /dev/null @@ -1,676 +0,0 @@ -name: Organism -description: Synthetic biology Organism -id: https://w3id.org/Organism -imports: -- linkml:types -prefixes: - linkml: - prefix_prefix: linkml - prefix_reference: https://w3id.org/linkml/ - synbio: - prefix_prefix: synbio - prefix_reference: https://w3id.org/synbio/ -default_prefix: synbio -enums: - assembly_dir_path_enum: - name: assembly_dir_path_enum - definition_uri: https://w3id.org/synbio/AssemblyDirPathEnum - from_schema: https://w3id.org/Organism - permissible_values: - /data/cDNA/Drosophila/: - text: /data/cDNA/Drosophila/ - description: /data/cDNA/Drosophila/ - /data/cDNA/human/: - text: /data/cDNA/human/ - description: /data/cDNA/human/ - binomial_name_enum: - name: binomial_name_enum - permissible_values: - Acetobacter pomorum: - text: Acetobacter pomorum - description: Acetobacter pomorum - meaning: NCBITaxon:65959 - annotations: - match_val: Acetobacter pomorum - match_type: label - cosine: 0.0 - title: Acetobacter pomorum - Acetobacter tropicalis: - text: Acetobacter tropicalis - description: Acetobacter tropicalis - meaning: NCBITaxon:104102 - annotations: - match_val: Acetobacter tropicalis - match_type: label - cosine: 0.0 - title: Acetobacter tropicalis - Aequorea.victoria: - text: Aequorea.victoria - description: Aequorea victoria - meaning: NCBITaxon:6100 - annotations: - match_val: Aequorea victoria - match_type: label - cosine: 0.0 - title: Aequorea victoria - Aequorea_victoria: - text: Aequorea_victoria - description: Aequorea victoria - meaning: NCBITaxon:6100 - annotations: - match_val: Aequorea victoria - match_type: label - cosine: 0.0 - title: Aequorea victoria - Agrobacterium.tumefaciens: - text: Agrobacterium.tumefaciens - description: Agrobacterium tumefaciens - meaning: NCBITaxon:358 - annotations: - match_val: Agrobacterium tumefaciens - match_type: label - cosine: 0.0 - title: Agrobacterium tumefaciens - Arabidopsis.thaliana: - text: Arabidopsis.thaliana - description: Arabidopsis thaliana - meaning: NCBITaxon:3702 - annotations: - match_val: Arabidopsis thaliana - match_type: label - cosine: 0.0 - title: Arabidopsis thaliana - Ashbya.gossypii: - text: Ashbya.gossypii - description: Eremothecium gossypii - meaning: NCBITaxon:33169 - annotations: - match_val: Ashbya gossypii - match_type: hasRelatedSynonym - cosine: 0.0 - title: Eremothecium gossypii - Bacillus flexus: - text: Bacillus flexus - annotations: - match_val: Bacillus flexus T6186-2 - match_type: label - cosine: 0.16650642566271778 - Bacillus kochii: - text: Bacillus kochii - description: Cytobacillus kochii - meaning: NCBITaxon:859143 - annotations: - match_val: Bacillus kochii - match_type: hasRelatedSynonym - cosine: 0.0 - title: Cytobacillus kochii - Bacillus subtilis: - text: Bacillus subtilis - description: Bacillus subtilis - meaning: NCBITaxon:1423 - annotations: - match_val: Bacillus subtilis - match_type: label - cosine: 0.0 - title: Bacillus subtilis - Bacillus.subtilis: - text: Bacillus.subtilis - description: Bacillus subtilis - meaning: NCBITaxon:1423 - annotations: - match_val: Bacillus subtilis - match_type: label - cosine: 0.0 - title: Bacillus subtilis - Bacteriophage.Mu: - text: Bacteriophage.Mu - description: Escherichia phage Mu - meaning: NCBITaxon:2681603 - annotations: - match_val: Bacteriophage Mu - match_type: hasExactSynonym - cosine: 0.0 - title: Escherichia phage Mu - Bordetella.bronchiseptica: - text: Bordetella.bronchiseptica - description: Bordetella bronchiseptica - meaning: NCBITaxon:518 - annotations: - match_val: Bordetella bronchiseptica - match_type: label - cosine: 0.0 - title: Bordetella bronchiseptica - Citrobacter freundii: - text: Citrobacter freundii - description: Citrobacter freundii - meaning: NCBITaxon:546 - annotations: - match_val: Citrobacter freundii - match_type: label - cosine: 0.0 - title: Citrobacter freundii - Cytomegalovirus: - text: Cytomegalovirus - description: Cytomegalovirus - meaning: NCBITaxon:10358 - annotations: - match_val: Cytomegalovirus - match_type: label - cosine: 0.0 - title: Cytomegalovirus - Discosoma.sp: - text: Discosoma.sp - description: Discosoma sp. - meaning: NCBITaxon:86600 - annotations: - match_val: Discosoma sp. - match_type: label - cosine: 0.0425728922436619 - title: Discosoma sp. - Drosophila melanogaster: - text: Drosophila melanogaster - description: Drosophila melanogaster - meaning: NCBITaxon:7227 - annotations: - match_val: Drosophila melanogaster - match_type: label - cosine: 0.0 - title: Drosophila melanogaster - Drosophila pseudoobscura: - text: Drosophila pseudoobscura - description: Drosophila pseudoobscura - meaning: NCBITaxon:7237 - annotations: - match_val: Drosophila pseudoobscura - match_type: label - cosine: 0.0 - title: Drosophila pseudoobscura - Drosophila.melanogaster: - text: Drosophila.melanogaster - description: Drosophila melanogaster - meaning: NCBITaxon:7227 - annotations: - match_val: Drosophila melanogaster - match_type: label - cosine: 0.0 - title: Drosophila melanogaster - Entacmaea.quadricolor: - text: Entacmaea.quadricolor - description: Entacmaea quadricolor - meaning: NCBITaxon:6118 - annotations: - match_val: Entacmaea quadricolor - match_type: label - cosine: 0.0 - title: Entacmaea quadricolor - Enterococcus durans: - text: Enterococcus durans - description: Enterococcus durans - meaning: NCBITaxon:53345 - annotations: - match_val: Enterococcus durans - match_type: label - cosine: 0.0 - title: Enterococcus durans - Escherichia coli: - text: Escherichia coli - description: Escherichia coli - meaning: NCBITaxon:562 - annotations: - match_val: Escherichia coli - match_type: label - cosine: 0.0 - title: Escherichia coli - Escherichia.coli: - text: Escherichia.coli - description: Escherichia coli - meaning: NCBITaxon:562 - annotations: - match_val: Escherichia coli - match_type: label - cosine: 0.0 - title: Escherichia coli - Homo sapiens: - text: Homo sapiens - description: Homo sapiens - meaning: NCBITaxon:9606 - annotations: - match_val: Homo sapiens - match_type: label - cosine: 0.0 - title: Homo sapiens - Homo sapiens Mus musculus: - text: Homo sapiens Mus musculus - annotations: - match_val: Homo sapiens/Mus musculus xenograft - match_type: label - cosine: 0.13992192242976664 - Human influenza A: - text: Human influenza A - annotations: - match_val: Human Influenza A Virus - match_type: hasExactSynonym - cosine: 0.13247238276429096 - Klebsiella.pneumoniae: - text: Klebsiella.pneumoniae - description: Klebsiella pneumoniae - meaning: NCBITaxon:573 - annotations: - match_val: Klebsiella pneumoniae - match_type: label - cosine: 0.0 - title: Klebsiella pneumoniae - Komagataella pastoris: - text: Komagataella pastoris - description: Komagataella pastoris - meaning: NCBITaxon:4922 - annotations: - match_val: Komagataella pastoris - match_type: label - cosine: 0.0 - title: Komagataella pastoris - Lactobacillus brevis: - text: Lactobacillus brevis - annotations: - match_val: Lactobacillus brevis EW - match_type: label - cosine: 0.05848691647599147 - Lactobacillus plantarum: - text: Lactobacillus plantarum - annotations: - match_val: Lactobacillus plantarum IPLA88 - match_type: label - cosine: 0.08929227511907478 - Lentivirus.human-immunodeficiency-virus1: - text: Lentivirus.human-immunodeficiency-virus1 - annotations: - match_val: Human immunodeficiency virus - match_type: label - cosine: 0.12022816123485602 - Leuconostoc mesenteroides: - text: Leuconostoc mesenteroides - description: Leuconostoc mesenteroides - meaning: NCBITaxon:1245 - annotations: - match_val: Leuconostoc mesenteroides - match_type: label - cosine: 0.0 - title: Leuconostoc mesenteroides - Mus musculus: - text: Mus musculus - description: Mus musculus - meaning: NCBITaxon:10090 - annotations: - match_val: Mus musculus - match_type: label - cosine: 0.0 - title: Mus musculus - NA: - text: NA - annotations: - match_val: Bacillus sp. B4-WWTP-NA-D-NA-NA - match_type: label - cosine: 0.5477329831333546 - Nepovirus.Tobacco-ringspot-virus: - text: Nepovirus.Tobacco-ringspot-virus - annotations: - match_val: Tobacco ringspot virus - match_type: label - cosine: 0.11392237043170383 - Paenibacillus taichungensis: - text: Paenibacillus taichungensis - description: Paenibacillus taichungensis - meaning: NCBITaxon:484184 - annotations: - match_val: Paenibacillus taichungensis - match_type: label - cosine: 0.0 - title: Paenibacillus taichungensis - Pichia pastoris: - text: Pichia pastoris - description: Komagataella pastoris - meaning: NCBITaxon:4922 - annotations: - match_val: Pichia pastoris - match_type: hasRelatedSynonym - cosine: 0.0 - title: Komagataella pastoris - Pisum.sativum: - text: Pisum.sativum - description: Pisum sativum - meaning: NCBITaxon:3888 - annotations: - match_val: Pisum sativum - match_type: label - cosine: 0.0 - title: Pisum sativum - Pseudomonas aeruginosa: - text: Pseudomonas aeruginosa - description: Pseudomonas aeruginosa - meaning: NCBITaxon:287 - annotations: - match_val: Pseudomonas aeruginosa - match_type: label - cosine: 0.0 - title: Pseudomonas aeruginosa - Pseudomonas plasmid pVS1: - text: Pseudomonas plasmid pVS1 - annotations: - match_val: Plasmid pVS1 - match_type: label - cosine: 0.2456634908586427 - Pseudomonas.putida: - text: Pseudomonas.putida - description: Pseudomonas putida - meaning: NCBITaxon:303 - annotations: - match_val: Pseudomonas putida - match_type: label - cosine: 0.0 - title: Pseudomonas putida - SARS-CoV-2: - text: SARS-CoV-2 - annotations: - match_val: Reverse genetics vector pCCI-4K-SARS-CoV-2-NanoLuc - match_type: label - cosine: 0.679492017453059 - Saccharomyces cerevisiae: - text: Saccharomyces cerevisiae - description: Saccharomyces cerevisiae - meaning: NCBITaxon:4932 - annotations: - match_val: Saccharomyces cerevisiae - match_type: label - cosine: 0.0 - title: Saccharomyces cerevisiae - Saccharomyces.cerevisiae: - text: Saccharomyces.cerevisiae - description: Saccharomyces cerevisiae - meaning: NCBITaxon:4932 - annotations: - match_val: Saccharomyces cerevisiae - match_type: label - cosine: 0.0 - title: Saccharomyces cerevisiae - Salmonella enterica: - text: Salmonella enterica - description: Salmonella enterica - meaning: NCBITaxon:28901 - annotations: - match_val: Salmonella enterica - match_type: label - cosine: 0.0 - title: Salmonella enterica - Simian.virus.40: - text: Simian.virus.40 - annotations: - match_val: Simian virus 41 - match_type: hasExactSynonym - cosine: 0.0714285714285714 - Solanum.tuberosum: - text: Solanum.tuberosum - description: Solanum tuberosum - meaning: NCBITaxon:4113 - annotations: - match_val: Solanum tuberosum - match_type: label - cosine: 0.0 - title: Solanum tuberosum - Sorangium.cellulosum: - text: Sorangium.cellulosum - description: Sorangium cellulosum - meaning: NCBITaxon:56 - annotations: - match_val: Sorangium cellulosum - match_type: label - cosine: 0.0 - title: Sorangium cellulosum - Staphylococcus.aureus: - text: Staphylococcus.aureus - description: Staphylococcus aureus - meaning: NCBITaxon:1280 - annotations: - match_val: Staphylococcus aureus - match_type: label - cosine: 0.0 - title: Staphylococcus aureus - Streptococcus.pyogenes: - text: Streptococcus.pyogenes - description: Streptococcus pyogenes - meaning: NCBITaxon:1314 - annotations: - match_val: Streptococcus pyogenes - match_type: label - cosine: 0.0 - title: Streptococcus pyogenes - Streptomyces.alboniger: - text: Streptomyces.alboniger - description: Streptomyces alboniger - meaning: NCBITaxon:132473 - annotations: - match_val: Streptomyces alboniger - match_type: label - cosine: 0.0 - title: Streptomyces alboniger - Streptomyces.noursei: - text: Streptomyces.noursei - description: Streptomyces noursei - meaning: NCBITaxon:1971 - annotations: - match_val: Streptomyces noursei - match_type: label - cosine: 0.0 - title: Streptomyces noursei - Vibrio natriegens: - text: Vibrio natriegens - description: Vibrio natriegens - meaning: NCBITaxon:691 - annotations: - match_val: Vibrio natriegens - match_type: label - cosine: 0.0 - title: Vibrio natriegens - Woodchuck Hepatitis Virus: - text: Woodchuck Hepatitis Virus - description: Woodchuck hepatitis virus - meaning: NCBITaxon:35269 - annotations: - match_val: Woodchuck hepatitis virus - match_type: label - cosine: 0.0 - title: Woodchuck hepatitis virus - Woodchuck.Hepatitis.Virus: - text: Woodchuck.Hepatitis.Virus - description: Woodchuck hepatitis virus - meaning: NCBITaxon:35269 - annotations: - match_val: Woodchuck hepatitis virus - match_type: label - cosine: 0.0 - title: Woodchuck hepatitis virus - Xenopus.laevis: - text: Xenopus.laevis - description: Xenopus laevis - meaning: NCBITaxon:8355 - annotations: - match_val: Xenopus laevis - match_type: label - cosine: 0.0 - title: Xenopus laevis - Yarrowia lipolytica: - text: Yarrowia lipolytica - description: Yarrowia lipolytica - meaning: NCBITaxon:4952 - annotations: - match_val: Yarrowia lipolytica - match_type: label - cosine: 0.0 - title: Yarrowia lipolytica - bacteriophage P1: - text: bacteriophage P1 - description: Escherichia virus P1 - meaning: NCBITaxon:10678 - annotations: - match_val: Bacteriophage P1 - match_type: hasExactSynonym - cosine: 0.0 - title: Escherichia virus P1 - bacteriophage.M13: - text: bacteriophage.M13 - description: Escherichia virus M13 - meaning: NCBITaxon:1977402 - annotations: - match_val: Bacteriophage M13 - match_type: hasExactSynonym - cosine: 0.0 - title: Escherichia virus M13 - bacteriophage.SP6: - text: bacteriophage.SP6 - description: Salmonella virus SP6 - meaning: NCBITaxon:194966 - annotations: - match_val: Bacteriophage SP6 - match_type: hasExactSynonym - cosine: 0.0 - title: Salmonella virus SP6 - bacteriophage.T3: - text: bacteriophage.T3 - description: Enterobacteria phage T3 - meaning: NCBITaxon:10759 - annotations: - match_val: Bacteriophage T3 - match_type: hasExactSynonym - cosine: 0.0 - title: Enterobacteria phage T3 - bacteriophage.T4: - text: bacteriophage.T4 - description: Escherichia virus T4 - meaning: NCBITaxon:10665 - annotations: - match_val: Bacteriophage T4 - match_type: hasExactSynonym - cosine: 0.0 - title: Escherichia virus T4 - bacteriophage.T7: - text: bacteriophage.T7 - description: Escherichia phage T7 - meaning: NCBITaxon:10760 - annotations: - match_val: Bacteriophage T7 - match_type: hasExactSynonym - cosine: 0.0 - title: Escherichia phage T7 - bacteriophage.f1: - text: bacteriophage.f1 - description: Enterobacteria phage f1 - meaning: NCBITaxon:10863 - annotations: - match_val: Bacteriophage f1 - match_type: hasExactSynonym - cosine: 0.0 - title: Enterobacteria phage f1 - bacteriophage.lambda: - text: bacteriophage.lambda - description: Escherichia virus Lambda - meaning: NCBITaxon:10710 - annotations: - match_val: Bacteriophage lambda - match_type: hasRelatedSynonym - cosine: 0.0 - title: Escherichia virus Lambda - cauliflower.mosaic.virus: - text: cauliflower.mosaic.virus - description: Cauliflower mosaic virus - meaning: NCBITaxon:10641 - annotations: - match_val: Cauliflower mosaic virus - match_type: label - cosine: 0.0 - title: Cauliflower mosaic virus - herpes.simplex.virus-1: - text: herpes.simplex.virus-1 - annotations: - match_val: Herpes simplex virus unknown type - match_type: label - cosine: 0.20069474611454663 - homo.sapiens: - text: homo.sapiens - description: Homo sapiens - meaning: NCBITaxon:9606 - annotations: - match_val: Homo sapiens - match_type: label - cosine: 0.0 - title: Homo sapiens - ms21: - text: ms21 - annotations: - match_val: Rhodobacter sp. MS21 - match_type: label - cosine: 0.6026402928804868 - phage.lambda: - text: phage.lambda - annotations: - match_val: Escherichia phage Lambda - match_type: label - cosine: 0.33667504192891995 - plasmids: - text: plasmids - description: plasmids - meaning: NCBITaxon:36549 - annotations: - match_val: plasmids - match_type: label - cosine: 0.0 - title: plasmids - synthetic: - text: synthetic - description: synthetic construct - meaning: NCBITaxon:32630 - annotations: - match_val: synthetic - match_type: hasRelatedSynonym - cosine: 0.0 - title: synthetic construct -slots: - species: - name: species - definition_uri: https://w3id.org/synbio/species - from_schema: https://w3id.org/Organism - strain: - name: strain - definition_uri: https://w3id.org/synbio/strain - from_schema: https://w3id.org/Organism - comment: - name: comment - definition_uri: https://w3id.org/synbio/comment - from_schema: https://w3id.org/Organism - default_genome_id: - name: default_genome_id - definition_uri: https://w3id.org/synbio/default_genome_id - from_schema: https://w3id.org/Organism - assembly_dir_path: - name: assembly_dir_path - definition_uri: https://w3id.org/synbio/assembly_dir_path - from_schema: https://w3id.org/Organism - binomial_name: - name: binomial_name - definition_uri: https://w3id.org/synbio/binomial_name - from_schema: https://w3id.org/Organism - range: binomial_name_enum -classes: - Organism: - name: Organism - definition_uri: https://w3id.org/synbio/Organism - from_schema: https://w3id.org/Organism - is_a: NamedThing - slots: - - species - - strain - - comment - - default_genome_id - - assembly_dir_path - - binomial_name -metamodel_version: 1.7.0 -generation_date: '2021-11-22T14:11:40' - From 1bb3268ce493c34571addda9d698c1b5d78bf1ef Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Fri, 26 May 2023 18:43:18 -0700 Subject: [PATCH 04/88] Adding CLI option from import-from-frictionless. (#118) * Adding CLI option from import-from-frictionless. Removed old CLI options * update * updating to latest schemabuilder --- notebooks/images/FRED.png | Bin 0 -> 1146333 bytes poetry.lock | 3451 +++++++++++++---- pyproject.toml | 2 +- schema_automator/cli.py | 88 +- .../generalizers/csv_data_generalizer.py | 77 +- .../importers/frictionless_import_engine.py | 6 +- .../importers/rdfs_import_engine.py | 6 +- .../importers/tabular_import_engine.py | 4 +- tests/resources/C2M2_datapackage.json | 64 +- tests/test_importers/test_sql_importer.py | 14 +- tests/test_importers/test_tabular_importer.py | 4 +- 11 files changed, 2962 insertions(+), 754 deletions(-) create mode 100644 notebooks/images/FRED.png diff --git a/notebooks/images/FRED.png b/notebooks/images/FRED.png new file mode 100644 index 0000000000000000000000000000000000000000..2b04a4d48ca1dd073c32e7d7b866e0dabaf1184a GIT binary patch literal 1146333 zcmeFa2V7H4yXZ>?5fqS)NK-+i2#C@n9YqC1id3Z+0cp|+iWI4$G?gMCMXG>GCrVWW z0@7Uy}@Io`J=A<=r8WJGPO 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= ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "flake8 (<5)", "pytest-cov", "pytest-enabler (>=1.3)", "jaraco.itertools", "func-timeout", "jaraco.functools", "more-itertools", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)"] +docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] +testing = ["big-O", "flake8 (<5)", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"] [extras] docs = [] mariadb = [] [metadata] -lock-version = "1.1" +lock-version = "2.0" python-versions = "^3.9" -content-hash = "cea3055d882759ee2516f9afdca0c576959ed7cafe4ed123d24d79f94d0289a5" - -[metadata.files] -aiohttp = [] -aiosignal = [] -alabaster = [] -antlr4-python3-runtime = [] -anyio = [] -appdirs = [] -appnope = [] -argon2-cffi = [] -argon2-cffi-bindings = [] -arrow = [] -asttokens = [] -async-timeout = [] -attrs = [] -babel = [] -backcall = [] -bcp47 = [] -beautifulsoup4 = [] -bioregistry = [] -bleach = [] -cachetools = [] -certifi = [] -cffi = [] -cfgraph = [] -chardet = [] -charset-normalizer = [] -class-resolver = [] -click = [] -click-log = [] -colorama = [] -curies = [] -daff = [] -debugpy = [] -decorator = [] -defusedxml = [] -deprecated = [] -deprecation = [] -distlib = [] -docopt = [] -docutils = [] -entrypoints = [] -et-xmlfile = [] -exceptiongroup = [] -executing = [] -fastjsonschema = [] -fastobo = [] -filelock = [] -fqdn = [] -frozenlist = [] -fsspec = [] -funowl = [] -ghp-import = [] -google = [] -google-api-core = [] -google-api-python-client = [] -google-auth = [] -google-auth-httplib2 = [] -google-auth-oauthlib = [] -googleapis-common-protos = [] -graphviz = [] -greenlet = [] -gspread = [] -gspread-formatting = [] -hbreader = [] -httplib2 = [] -idna = [] -imagesize = [] -importlib-metadata = [] -inflect = [] -iniconfig = [] -ipykernel = [] -ipython = [] -ipython-genutils = [] -ipywidgets = [] -isodate = [] -isoduration = [] -jedi = [] -jinja2 = [] -json-flattener = [] -jsonasobj = [] -jsonasobj2 = [] -jsonpatch = [] -jsonpath-ng = [] -jsonpointer = [] -jsonschema = [] -jupyter = [] -jupyter-client = [] -jupyter-console = [] -jupyter-core = [] -jupyter-server = [] -jupyterlab-pygments = [] -jupyterlab-widgets = [] -kgcl-rdflib = [] -kgcl-schema = [] -lark = [] -linkml = [] -linkml-dataops = [] -linkml-runtime = [] -lxml = [] -markdown = [] -markdown-it-py = [] -markupsafe = [] -matplotlib-inline = [] -mdit-py-plugins = [] -mdurl = [] -mergedeep = [] -mistune = [] -mkdocs = [] -more-click = [] -multidict = [] -mypy-extensions = [] -myst-parser = [] -nbclassic = [] -nbclient = [] -nbconvert = [] -nbformat = [] -nest-asyncio = [] -networkx = [] -notebook = [] -notebook-shim = [] -num2words = [] -numpy = [] -nxontology = [] -oaklib = [] -oauthlib = [] -ols-client = [] -ontodev-cogs = [] -ontoportal-client = [] -openpyxl = [] -packaging = [] -pandas = [] -pandasql = [] -pandera = [] -pandocfilters = [] -parse = [] -parso = [] -pexpect = [] -pickleshare = [] -platformdirs = [] -pluggy = [] -ply = [] -prefixcommons = [] -prefixmaps = [] -prometheus-client = [] -prompt-toolkit = [] -pronto = [] -protobuf = [] -psutil = [] -psycopg2-binary = [] -ptyprocess = [] -pure-eval = [] -py = [] -pyarrow = [] -pyasn1 = [] -pyasn1-modules = [] -pycparser = [] -pydantic = [] -pygments = [] -pyjsg = [] -pyparsing = [] -pyrsistent = [] -pyshex = [] -pyshexc = [] -pystow = [] -pytest = [] -pytest-logging = [] -python-dateutil = [] -pytrie = [] -pytz = [] -pywin32 = [] -pywinpty = [] -pyyaml = [] -pyyaml-env-tag = [] -pyzmq = [] -qtconsole = [] -qtpy = [] -quantulum3 = [] -ratelimit = [] -rdflib = [] -rdflib-jsonld = [] -rdflib-shim = [] -requests = [] -requests-oauthlib = [] -rfc3339-validator = [] -rfc3987 = [] -rsa = [] -"ruamel.yaml" = [] -"ruamel.yaml.clib" = [] -schemasheets = [] -scipy = [] -semsql = [] -send2trash = [] -shexjsg = [] -six = [] -sniffio = [] -snowballstemmer = [] -sortedcontainers = [] -soupsieve = [] -sparqlslurper = [] -sparqlwrapper = [] -sphinx = [] -sphinx-click = [] -sphinx-pdj-theme = [] -sphinx-rtd-theme = [] -sphinxcontrib-applehelp = [] -sphinxcontrib-devhelp = [] -sphinxcontrib-htmlhelp = [] -sphinxcontrib-jsmath = [] -sphinxcontrib-mermaid = [] -sphinxcontrib-qthelp = [] -sphinxcontrib-serializinghtml = [] -sqlalchemy = [] -sqlalchemy-utils = [] -sssom = [] -sssom-schema = [] -stack-data = [] -strsimpy = [] -tabulate = [] -termcolor = [] -terminado = [] -tinycss2 = [] -tomli = [] -tomlkit = [] -tornado = [] -tox = [] -tqdm = [] -traitlets = [] -typing-extensions = [] -typing-inspect = [] -uri-template = [] -uritemplate = [] -urllib3 = [] -validators = [] -virtualenv = [] -watchdog = [] -wcwidth = [] -webcolors = [] -webencodings = [] -websocket-client = [] -widgetsnbextension = [] -wrapt = [] -xmltodict = [] -yarl = [] -zipp = [] +content-hash = "f0d199db033932f20a37cce0255a6115dcd3f0eac484a41dafb578dcf185d076" diff --git a/pyproject.toml b/pyproject.toml index 917a15d..4358a4f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -12,7 +12,7 @@ packages = [ [tool.poetry.dependencies] python = "^3.9" -linkml = "^1.3.5" +linkml = ">=1.5.4" mkdocs = "^1.2.3" pandas = "^1.3.5" python-dateutil = "^2.8.2" diff --git a/schema_automator/cli.py b/schema_automator/cli.py index fbce81f..ccd5bc3 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -13,7 +13,7 @@ from linkml_runtime.linkml_model import SchemaDefinition from oaklib.selector import get_resource_from_shorthand, get_implementation_from_shorthand -from schema_automator import JsonLdAnnotator +from schema_automator import JsonLdAnnotator, FrictionlessImportEngine from schema_automator.annotators.schema_annotator import SchemaAnnotator from schema_automator.generalizers.csv_data_generalizer import CsvDataGeneralizer from schema_automator.generalizers.generalizer import DEFAULT_CLASS_NAME, DEFAULT_SCHEMA_NAME @@ -44,6 +44,9 @@ default=DEFAULT_SCHEMA_NAME, show_default=True, help='Schema name') +schema_id_option = click.option( + '--schema-id', + help='Schema id') annotator_option = click.option( '--annotator', '-A', @@ -52,6 +55,18 @@ "--use-attributes/--no-use-attributes", help="If true, use attributes over slots/slot_usage" ) +column_separator_option = click.option('--column-separator', '-s', default='\t', help='separator') + +# generalizer options + +downcase_header_option = click.option('--downcase-header/--no-downcase-header', default=False, help='if true make headers lowercase') +snakecase_header_option = click.option('--snakecase-header/--no-snakecase-header', default=False, help='if true make headers snakecase') +infer_foreign_keys_option = click.option('--infer-foreign-keys/--no-infer-foreign-keys', default=False, help='infer ranges/foreign keys') +enum_columns_option = click.option('--enum-columns', '-E', multiple=True, help='column(s) that is forced to be an enum') +enum_mask_columns_option = click.option('--enum-mask-columns', multiple=True, help='column(s) that are excluded from being enums') +max_enum_size_option = click.option('--max-enum-size', default=50, help='do not create an enum if more than max distinct members') +enum_threshold_option = click.option('--enum-threshold', default=0.1, help='if the number of distinct values / rows is less than this, do not make an enum') + @click.group() @click.option("-v", "--verbose", @@ -89,13 +104,12 @@ def main(verbose: int, quiet: bool): @schema_name_option @annotator_option @click.option('--class-name', '-c', default=DEFAULT_CLASS_NAME, help='Core class name in schema') -@click.option('--column-separator', '-s', default='\t', help='separator') -@click.option('--downcase-header/--no-downcase-header', default=False, help='if true make headers lowercase') -@click.option('--enum-columns', '-E', multiple=True, help='column that is forced to be an enum') -@click.option('--enum-threshold', type=click.FLOAT, help='set high to be more inclusive') -@click.option('--max-enum-size', - type=click.INT, - help='set high to be more inclusive') +@column_separator_option +@downcase_header_option +@snakecase_header_option +@enum_columns_option +@enum_threshold_option +@max_enum_size_option @click.option('--data-dictionary-row-count', type=click.INT, help='rows that provide metadata about columns') @@ -128,13 +142,12 @@ def generalize_tsv(tsvfile, output, class_name, schema_name, pandera: bool, anno @click.argument('tsvfiles', nargs=-1) # input TSV (must have column headers @output_option @schema_name_option -@click.option('--column-separator', '-s', default='\t', help='separator') -@click.option('--downcase-header/--no-downcase-header', default=False, help='if true make headers lowercase') -@click.option('--infer-foreign-keys/--no-infer-foreign-keys', default=False, help='infer ranges/foreign keys') -@click.option('--enum-columns', '-E', multiple=True, help='column(s) that is forced to be an enum') -@click.option('--enum-mask-columns', multiple=True, help='column(s) that are excluded from being enums') -@click.option('--max-enum-size', default=50, help='do not create an enum if more than max distinct members') -@click.option('--enum-threshold', default=0.1, help='if the number of distinct values / rows is less than this, do not make an enum') +@column_separator_option +@downcase_header_option +@snakecase_header_option +@enum_columns_option +@enum_threshold_option +@max_enum_size_option @click.option('--robot/--no-robot', default=False, help='set if the TSV is a ROBOT template') def generalize_tsvs(tsvfiles, output, schema_name, **kwargs): """ @@ -157,6 +170,12 @@ def generalize_tsvs(tsvfiles, output, schema_name, **kwargs): @click.argument('url') # input TSV (must have column headers @output_option @schema_name_option +@column_separator_option +@downcase_header_option +@snakecase_header_option +@enum_columns_option +@enum_threshold_option +@max_enum_size_option @click.option('--class-name', '-c', default=DEFAULT_CLASS_NAME, help='Core class name in schema') @click.option('--pandera/--no-pandera', default=False, help='set to use panderas as inference engine') @click.option('--data-output', help='Path to file of downloaded data') @@ -179,8 +198,13 @@ def generalize_htmltable(url, output, class_name, schema_name, pandera: bool, dfs = pd.read_html(url) logging.info(f"{url} has {len(dfs)} tables") df = dfs[table_number] - importer = TableImportEngine(**kwargs) - schema = importer.import_from_dataframe(df) + if data_output: + df.to_csv(data_output, index=False, sep="\t") + if pandera: + ge = PandasDataGeneralizer(**kwargs) + else: + ge = CsvDataGeneralizer(**kwargs) + schema = ge.convert_from_dataframe(df, class_name=class_name, schema_name=schema_name) write_schema(schema, output) @@ -241,13 +265,15 @@ def import_htmltable(url, output, class_name, schema_name, columns, table_number: int, data_output, **kwargs): """ - Generalizes from a table parsed from a URL + Imports from a table parsed from a URL using SchemaSheets Uses pandas/beautiful soup """ dfs = pd.read_html(url) logging.info(f"{url} has {len(dfs)} tables") df = dfs[table_number] + if data_output: + df.to_csv(data_output, index=False, sep="\t") ie = TableImportEngine(columns=columns.split(","), **kwargs) schema = ie.import_from_dataframe(df) write_schema(schema, output) @@ -339,6 +365,26 @@ def import_json_schema(input, output, import_project: bool, schema_name, format, ie.import_project(input, output, name=schema_name, format=format) +@main.command() +@click.argument('input') +@output_option +@schema_name_option +@schema_id_option +def import_frictionless(input, output, schema_name, schema_id, **kwargs): + """ + Imports from Frictionless data package to LinkML + + See :ref:`importers` for more on the importer framework + + Example: + + schemauto import-frictionless cfde.package.json + """ + ie = FrictionlessImportEngine(**kwargs) + schema = ie.convert(input, name=schema_name, id=schema_id) + write_schema(schema, output) + + @main.command() @click.argument('owlfile') @output_option @@ -428,7 +474,7 @@ def generalize_rdf(rdffile, dir, output, **args): @output_option def annotate_schema(schema: str, input: str, output: str, **kwargs): """ - Annotate all elements of a schema + Annotate all elements of a schema. This uses OAK (https://incatools.github.io/ontology-access-kit), and you can provide any OAK backend that supports text annotation. @@ -471,6 +517,10 @@ def enrich_schema(schema: str, input: str, output: str, annotate: bool, **args): """ Enrich a schema using an ontology. + Here, "enrich" means copying over metadata from the ontology to the schema. + For example, if the schema has a class "Gene" that is mapped to a SO class for "gene", + then calling this command will copy the SO class definition to the schema class. + This will use OAK to add additional metadata using uris and mappings in the schema. For example, if your schema has a class with a mapping to a SO class, diff --git a/schema_automator/generalizers/csv_data_generalizer.py b/schema_automator/generalizers/csv_data_generalizer.py index b5e5376..cb8c6e8 100644 --- a/schema_automator/generalizers/csv_data_generalizer.py +++ b/schema_automator/generalizers/csv_data_generalizer.py @@ -15,6 +15,7 @@ from linkml_runtime import SchemaView from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, TypeDefinition, SlotDefinition from linkml_runtime.linkml_model.meta import UniqueKey +from linkml_runtime.utils.formatutils import underscore from quantulum3 import parser as q_parser from dataclasses import dataclass, field @@ -93,6 +94,9 @@ class CsvDataGeneralizer(Generalizer): downcase_header: bool = False """If true, coerce column names to be lower case""" + snakecase_header: bool = False + """If true, coerce column names to be snake case""" + infer_foreign_keys: bool = False """For multi-CVS files, infer linkages between rows""" @@ -127,10 +131,14 @@ def infer_linkages(self, files: List[str], **kwargs) -> List[ForeignKey]: c = os.path.splitext(os.path.basename(file))[0] if self.downcase_header: c = c.lower() + if self.snakecase_header: + c = underscore(c) logging.info(f'READING {file} ') df = pd.read_csv(file, sep=self.column_separator, skipinitialspace=True).fillna("") if self.downcase_header: df = df.rename(columns=str.lower) + if self.snakecase_header: + df = df.rename(columns=underscore) exclude = [] for col in df.columns: vals = set(df[col].tolist()) @@ -242,6 +250,8 @@ def convert_multiple(self, files: List[str], **kwargs) -> SchemaDefinition: c = os.path.splitext(os.path.basename(file))[0] if self.downcase_header: c = c.lower() + if self.snakecase_header: + c = underscore(c) s = self.convert(file, class_name=c, **kwargs) if s is not None: schemas.append(s) @@ -267,6 +277,16 @@ def convert(self, file: str, **kwargs) -> SchemaDefinition: rr = csv.DictReader(tsv_file, fieldnames=header, delimiter=self.column_separator, skipinitialspace=False) return self.convert_dicts([r for r in rr], **kwargs) + def convert_from_dataframe(self, df: pd.DataFrame, **kwargs) -> SchemaDefinition: + """ + Converts a single dataframe to a single-class schema + + :param df: + :param kwargs: + :return: + """ + return self.convert_dicts(df.to_dict('records'), **kwargs) + def read_slot_tsv(self, file: str, **kwargs) -> Dict: with open(file, newline='') as tsv_file: rows_list = csv.reader(tsv_file, delimiter=self.column_separator) @@ -359,6 +379,8 @@ def convert_dicts(self, for row in rr: if self.downcase_header: row = {k.lower(): v for k, v in row.items()} + if self.snakecase_header: + row = {underscore(k): v for k, v in row.items()} n += 1 if n == 1 and self.robot: for k, v in row.items(): @@ -784,60 +806,5 @@ def add_missing_to_schema(schema: SchemaDefinition): description='Holds a measurement serialized as a string') -@click.group() -def main(): - pass - - -@main.command() -@click.argument('tsvfile') # input TSV (must have column headers -@click.option('--output', '-o', help='Output file') -@click.option('--class_name', '-c', default='example', help='Core class name in schema') -@click.option('--schema_name', '-n', default='example', help='Schema name') -@click.option('--separator', '-s', default='\t', help='separator') -@click.option('--downcase-header/--no-downcase-header', default=False, help='if true make headers lowercase') -@click.option('--enum-columns', '-E', multiple=True, help='column that is forced to be an enum') -@click.option('--robot/--no-robot', default=False, help='set if the TSV is a ROBOT template') -def tsv2model(tsvfile, output, separator, class_name, schema_name, **kwargs): - """ Infer a model from a TSV """ - ie = CsvDataGeneralizer(**kwargs) - schema = ie.convert(tsvfile, class_name=class_name, schema_name=schema_name) - write_schema(schema, output) - - -@main.command() -@click.argument('tsvfiles', nargs=-1) # input TSV (must have column headers -@click.option('--output', '-o', help='Output file') -@click.option('--schema_name', '-n', default='example', help='Schema name') -@click.option('--file_separator', '-s', default='\t', help='separator') -@click.option('--downcase-header/--no-downcase-header', default=False, help='if true make headers lowercase') -@click.option('--infer-foreign-keys/--no-infer-foreign-keys', default=False, help='infer ranges/foreign keys') -@click.option('--enum-columns', '-E', multiple=True, help='column(s) that is forced to be an enum') -@click.option('--enum-mask-columns', multiple=True, help='column(s) that are excluded from being enums') -@click.option('--max-enum-size', default=50, help='do not create an enum if more than max distinct members') -@click.option('--enum-threshold', default=0.1, help='if the number of distinct values / rows is less than this, do not make an enum') -@click.option('--robot/--no-robot', default=False, help='set if the TSV is a ROBOT template') -def tsvs2model(tsvfiles, output, schema_name, **kwargs): - """ Infer a model from multiple TSVs """ - ie = CsvDataGeneralizer(**kwargs) - schema = ie.convert_multiple(tsvfiles, schema_name=schema_name) - write_schema(schema, output) - - -@main.command() -@click.argument('yamlfile') -@click.option('--zooma-confidence', '-Z', help='zooma confidence') -@click.option('--results', '-r', help='mapping results file') -def enrich(yamlfile, results, **args): - """ Infer a model from a TSV """ - yamlobj = yaml.load(open(yamlfile)) - cache = {} - infer_enum_meanings(yamlobj, cache=cache) - if results is not None: - with open(results, "w") as io: - io.write(yaml.dump(cache)) - print(yaml.dump(yamlobj, default_flow_style=False, sort_keys=False)) - - if __name__ == '__main__': main() diff --git a/schema_automator/importers/frictionless_import_engine.py b/schema_automator/importers/frictionless_import_engine.py index 14a9d79..3c3e57e 100644 --- a/schema_automator/importers/frictionless_import_engine.py +++ b/schema_automator/importers/frictionless_import_engine.py @@ -46,7 +46,7 @@ class FrictionlessImportEngine(ImportEngine): """ - def convert(self, file: str, id: str,name: str, **kwargs) -> SchemaDefinition: + def convert(self, file: str, id: str=None, name: str=None, **kwargs) -> SchemaDefinition: """ Converts one or more JSON files into a Schema @@ -59,8 +59,6 @@ def convert(self, file: str, id: str,name: str, **kwargs) -> SchemaDefinition: schema = sb.schema if id: schema.id = id - if name: - sb.add_prefix(name, f"{id}/") if not name: name = package.name if name: @@ -128,7 +126,7 @@ def add_enum(self, sb: SchemaBuilder, field: fl.Field) -> EnumDefinition: if len(toks) == 2: [prefix, short] = toks pv = PermissibleValue(short, meaning=code) - sb.add_prefix(prefix, f"{sb.schema.id}/{prefix}/") + sb.add_prefix(prefix, f"{sb.schema.id}/{prefix}/", replace_if_present=True) e.permissible_values[pv.text] = pv if e.name is sb.schema: raise NotImplementedError(f"Cannot yet merge enums") diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index e67da6d..c1ef959 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -104,13 +104,14 @@ def convert( if name is None: name = "example" sb = SchemaBuilder(name=name) + sb.add_defaults() schema = sb.schema for k, v in g.namespaces(): - sb.add_prefix(k, v) + sb.add_prefix(k, v, replace_if_present=True) if default_prefix is not None: schema.default_prefix = default_prefix if default_prefix not in schema.prefixes: - sb.add_prefix(default_prefix, model_uri) + sb.add_prefix(default_prefix, model_uri, replace_if_present=True) schema.id = schema.prefixes[default_prefix].prefix_reference cls_slots = defaultdict(list) props = [] @@ -155,7 +156,6 @@ def convert( c.slots = cls_slots.get(cn, []) c.class_uri = str(s.n3(g.namespace_manager)) sb.add_class(c) - sb.add_defaults() if identifier is not None: id_slot = SlotDefinition(identifier, identifier=True, range="uriorcurie") schema.slots[identifier] = id_slot diff --git a/schema_automator/importers/tabular_import_engine.py b/schema_automator/importers/tabular_import_engine.py index 9ab9e9f..4c6dfc9 100644 --- a/schema_automator/importers/tabular_import_engine.py +++ b/schema_automator/importers/tabular_import_engine.py @@ -40,6 +40,9 @@ def import_from_dataframe(self, df: pd.DataFrame): :return: """ tf = NamedTemporaryFile(delete=False) + if not self.columns: + raise ValueError("Must specify columns") + logging.info(f"Using columns: {self.columns}") ix = 1 line = pd.DataFrame(dict(zip(df.head(), self.columns)), index=[ix]) df = pd.concat([df.iloc[:ix-1], line, df.iloc[ix-1:]]).reset_index(drop=True) @@ -47,7 +50,6 @@ def import_from_dataframe(self, df: pd.DataFrame): df.insert(0, column="parent", value=[f">{self.element_type}"] + [self.parent] * (len(df) - 1)) - #print(df) df.to_csv(tf.name, sep='\t', index=False) #print(open(tf.name, 'r').read()) #element_map = dict(zip(df.head(), self.columns)) diff --git a/tests/resources/C2M2_datapackage.json b/tests/resources/C2M2_datapackage.json index bac869b..79db41c 100644 --- a/tests/resources/C2M2_datapackage.json +++ b/tests/resources/C2M2_datapackage.json @@ -88,6 +88,7 @@ "description": "A filename with no prepended PATH information", "type": "string", "constraints": { + "required": true, "pattern": "^[^\/\\:]+$" } }, @@ -258,7 +259,7 @@ "format": "any" }, { - "name": "assay_type", + "name": "sample_prep_method", "description": "An OBI CV term ID (from the 'planned process' branch of the vocabulary, excluding the 'assay' subtree) describing the preparation method that produced this biosample", "type": "string" }, @@ -286,9 +287,9 @@ } }, { - "fields": "assay_type", + "fields": "sample_prep_method", "reference": { - "resource": "assay_type", + "resource": "sample_prep_method", "fields": "id" } }, @@ -384,9 +385,7 @@ "cfde_subject_sex:0", "cfde_subject_sex:1", "cfde_subject_sex:2", - "cfde_subject_sex:3", - "cfde_subject_sex:4", - "cfde_subject_sex:5" + "cfde_subject_sex:3" ] }, { @@ -2483,7 +2482,9 @@ "cfde_subject_race:1", "cfde_subject_race:2", "cfde_subject_race:3", - "cfde_subject_race:4" + "cfde_subject_race:4", + "cfde_subject_race:5", + "cfde_subject_race:6" ] } ], @@ -2597,7 +2598,7 @@ "skipInitialSpace": true, "header": true }, - "description": "List of Ontology for Biomedical Investigations (OBI) CV terms used to describe types of experiment that generate C2M2 biosamples or results stored in C2M2 files", + "description": "List of Ontology for Biomedical Investigations (OBI) CV terms used to describe types of experiment that generate results stored in C2M2 files", "schema": { "fields": [ { @@ -3264,6 +3265,53 @@ ] } }, + { + "profile": "tabular-data-resource", + "name": "sample_prep_method", + "title": "sample_prep_method", + "path": "sample_prep_method.tsv", + "dialect": { + "delimiter": "\t", + "doubleQuote": false, + "lineTerminator": "\n", + "skipInitialSpace": true, + "header": true + }, + "description": "List of Ontology for Biomedical Investigations (OBI) CV terms used to describe types of preparation methods that produce C2M2 biosamples", + "schema": { + "fields": [ + { + "name": "id", + "description": "An OBI CV term", + "type": "string", + "constraints": { + "required": true, + "unique": true + } + }, + { + "name": "name", + "description": "A short, human-readable, machine-read-friendly label for this OBI term", + "type": "string", + "constraints": { + "required": true + } + }, + { + "name": "description", + "description": "A human-readable description of this OBI term", + "type": "string" + }, + { + "name": "synonyms", + "description": "A list of synonyms for this term as identified by the OBI metadata", + "type": "array" + } + ], + "missingValues": [ "" ], + "primaryKey": "id" + } + }, { "profile": "tabular-data-resource", "name": "id_namespace", diff --git a/tests/test_importers/test_sql_importer.py b/tests/test_importers/test_sql_importer.py index 531505d..2cbe60d 100644 --- a/tests/test_importers/test_sql_importer.py +++ b/tests/test_importers/test_sql_importer.py @@ -35,9 +35,9 @@ def setUp(self) -> None: sb = SchemaBuilder() sb.add_class('Person', ['id', 'name', 'email', 'age', 'knows']) - sb.add_slot(SlotDefinition('id', identifier=True)) - sb.add_slot(SlotDefinition('age', range='integer')) - sb.add_slot(SlotDefinition('knows', range='Person', multivalued=True)) + sb.add_slot(SlotDefinition('id', identifier=True), replace_if_present=True) + sb.add_slot(SlotDefinition('age', range='integer'), replace_if_present=True) + sb.add_slot(SlotDefinition('knows', range='Person', multivalued=True), replace_if_present=True) sb.add_defaults() schema = sb.schema #print(yaml_dumper.dumps(schema)) @@ -67,7 +67,11 @@ def test_from_sql(self): for c in schemaview.all_classes().values(): self.assertIn(c.name, schemaview_rt.all_classes()) for s in schemaview.class_induced_slots(c.name): - self.assertIn(s.name, schemaview_rt.all_slots()) + if s.name == "knows": + # these slots are moved to join tables + self.assertNotIn(s.name, schemaview_rt.all_slots().keys()) + else: + self.assertIn(s.name, schemaview_rt.all_slots().keys()) person = schemaview_rt.get_class('Person') person_knows_join = schemaview_rt.get_class('Person_knows') id_slot = person.attributes['id'] @@ -75,7 +79,7 @@ def test_from_sql(self): self.assertTrue(id_slot.identifier) self.assertEqual('integer', age_slot.range) self.assertEqual('Person', person_knows_join.attributes['Person_id'].range) - self.assertEqual('Person', person_knows_join.attributes['knows'].range) + self.assertEqual('Person', person_knows_join.attributes['knows_id'].range) diff --git a/tests/test_importers/test_tabular_importer.py b/tests/test_importers/test_tabular_importer.py index 0368c77..84cf92b 100644 --- a/tests/test_importers/test_tabular_importer.py +++ b/tests/test_importers/test_tabular_importer.py @@ -3,7 +3,6 @@ import unittest import os from pathlib import Path -from sys import platform import pandas as pd @@ -21,7 +20,7 @@ class TestTableImporter(unittest.TestCase): def setUp(self) -> None: pass - def test_import(self): + def test_html_import(self): """ Test importing a table from HTML via BS """ @@ -37,3 +36,4 @@ def test_import(self): + From 870f45a560c9eed918dfdf66adf5462d53ec73e7 Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Fri, 3 Nov 2023 16:45:41 +0100 Subject: [PATCH 05/88] Update Bioregistry dependency --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 4358a4f..bedfb8b 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -23,7 +23,7 @@ click-log = "^0.4.0" psycopg2-binary = "^2.9.2" strsimpy = "^0.2.1" requests = "^2.26.0" -bioregistry = "^0.5.87" +bioregistry = "^0.10" oaklib = "^0.1.52" pandera = "^0.12.0" tomlkit = "^0.11.4" From b70cef4c6edb9a954c7a2effdfaeb08679da93f6 Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Fri, 3 Nov 2023 16:46:32 +0100 Subject: [PATCH 06/88] Update pyproject.toml --- pyproject.toml | 1 - 1 file changed, 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index bedfb8b..87afe41 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -23,7 +23,6 @@ click-log = "^0.4.0" psycopg2-binary = "^2.9.2" strsimpy = "^0.2.1" requests = "^2.26.0" -bioregistry = "^0.10" oaklib = "^0.1.52" pandera = "^0.12.0" tomlkit = "^0.11.4" From 2a0c41f38a5f6fde6c9dc8ab0c7e7f7d8e5d8783 Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Fri, 3 Nov 2023 16:48:36 +0100 Subject: [PATCH 07/88] Update poetry.lock --- poetry.lock | 3076 ++++++++++++++++++++++++++++----------------------- 1 file changed, 1702 insertions(+), 1374 deletions(-) diff --git a/poetry.lock b/poetry.lock index 88b5b09..4fb5e29 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2,99 +2,99 @@ [[package]] name = "aiohttp" -version 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Serves pure pythonic library with no dependencies." -category = "main" optional = false python-versions = "*" files = [ @@ -144,7 +19,6 @@ parse = ["beautifulsoup4 (>=4.10.0,<5.0)", "requests (>=2.12.0,<3)"] name = "alabaster" version = "0.7.13" description = "A configurable sidebar-enabled Sphinx theme" -category = "main" optional = false python-versions = ">=3.6" files = [ @@ -156,7 +30,6 @@ files = [ name = "annotated-types" version = "0.6.0" description = "Reusable constraint types to use with typing.Annotated" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -168,7 +41,6 @@ files = [ name = "antlr4-python3-runtime" version = "4.9.3" description = "ANTLR 4.9.3 runtime for Python 3.7" -category = "main" optional = false python-versions = "*" files = [ @@ -179,7 +51,6 @@ files = [ name = "anyio" version = "4.0.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -201,7 +72,6 @@ trio = ["trio (>=0.22)"] name = "appdirs" version = "1.4.4" description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." -category = "main" optional = false python-versions = "*" files = [ @@ -213,7 +83,6 @@ files = [ name = "appnope" version = "0.1.3" description = "Disable App Nap on macOS >= 10.9" -category = "dev" optional = false python-versions = "*" files = [ @@ -225,7 +94,6 @@ files = [ name = "argon2-cffi" version = "23.1.0" description = "Argon2 for Python" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -246,7 +114,6 @@ typing = ["mypy"] name = "argon2-cffi-bindings" version = "21.2.0" description = "Low-level CFFI bindings for Argon2" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -284,7 +151,6 @@ tests = ["pytest"] name = "arrow" version = "1.3.0" description = "Better dates & times for Python" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -298,13 +164,12 @@ types-python-dateutil = ">=2.8.10" [package.extras] doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"] -test = ["dateparser (>=1.0.0,<2.0.0)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (>=3.0.0,<4.0.0)"] +test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"] [[package]] name = "asttokens" version = "2.4.1" description = "Annotate AST trees with source code positions" -category = "dev" optional = false python-versions = "*" files = [ @@ -323,7 +188,6 @@ test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"] name = "async-lru" version = "2.0.4" description = "Simple LRU cache for asyncio" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -334,23 +198,10 @@ files = [ [package.dependencies] typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""} -[[package]] -name = "async-timeout" -version = "4.0.3" -description = "Timeout context manager for asyncio programs" -category = "main" -optional = false -python-versions = ">=3.7" -files = [ - 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python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7" files = [ @@ -745,45 +611,41 @@ files = [ [[package]] name = "comm" -version = "0.1.4" +version = "0.2.0" description = "Jupyter Python Comm implementation, for usage in ipykernel, xeus-python etc." -category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.8" files = [ - {file = "comm-0.1.4-py3-none-any.whl", hash = "sha256:6d52794cba11b36ed9860999cd10fd02d6b2eac177068fdd585e1e2f8a96e67a"}, - {file = "comm-0.1.4.tar.gz", hash = "sha256:354e40a59c9dd6db50c5cc6b4acc887d82e9603787f83b68c01a80a923984d15"}, + {file = "comm-0.2.0-py3-none-any.whl", hash = "sha256:2da8d9ebb8dd7bfc247adaff99f24dce705638a8042b85cb995066793e391001"}, + {file = "comm-0.2.0.tar.gz", hash = "sha256:a517ea2ca28931c7007a7a99c562a0fa5883cfb48963140cf642c41c948498be"}, ] [package.dependencies] traitlets = ">=4" [package.extras] -lint = ["black (>=22.6.0)", "mdformat (>0.7)", "mdformat-gfm (>=0.3.5)", "ruff (>=0.0.156)"] test = ["pytest"] -typing = ["mypy (>=0.990)"] [[package]] name = "curies" -version = "0.4.5" +version = "0.7.2" description = "Idiomatic conversion between URIs and compact URIs (CURIEs)." -category = "main" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "curies-0.4.5-py3-none-any.whl", hash = "sha256:73281f6616ec47c8d46d842def7a2021416c9ac10f580f9116125abf4bd2f943"}, - {file = "curies-0.4.5.tar.gz", hash = "sha256:c01626183b520db1b4af6a1fd41ee6d02462fea4ce54d8c5a528e5782268589c"}, + {file = "curies-0.7.2-py3-none-any.whl", hash = "sha256:42725a047c0732f60b96e92b6251fe1709f6b3fadd9bfbd38c8ebddad99ee008"}, + {file = "curies-0.7.2.tar.gz", hash = "sha256:20956f6a285321fb5f66a133f134d743a29b53bb894793d7db5d3ae1609d36ea"}, ] [package.dependencies] +pydantic = "*" pytrie = "*" requests = "*" [package.extras] -bioregistry = ["bioregistry (>=0.5.136)"] -docs = ["sphinx", "sphinx-autodoc-typehints", "sphinx-automodapi", "sphinx-rtd-theme"] -fastapi = ["fastapi", "httpx"] -flask = ["flask"] +docs = ["sphinx", "sphinx-automodapi", "sphinx-rtd-theme"] +fastapi = ["defusedxml", "fastapi", "httpx", "python-multipart", "uvicorn"] +flask = ["defusedxml", "flask"] pandas = ["pandas"] rdflib = ["rdflib"] tests = ["coverage", "pytest"] @@ -792,7 +654,6 @@ tests = ["coverage", "pytest"] name = "daff" version = "1.3.46" description = "Diff and patch tables" -category = "main" optional = false python-versions = "*" files = [ @@ -803,7 +664,6 @@ files = [ name = "debugpy" version = "1.8.0" description = "An implementation of the Debug Adapter Protocol for Python" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -831,7 +691,6 @@ files = [ name = "decorator" version = "5.1.1" description = "Decorators for Humans" -category = "dev" optional = false python-versions = ">=3.5" files = [ @@ -843,7 +702,6 @@ files = [ name = "defusedxml" version = "0.7.1" description = "XML bomb protection for Python stdlib modules" -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ @@ -855,7 +713,6 @@ files = [ name = "deprecated" version = "1.2.14" description = "Python @deprecated decorator to deprecate old python classes, functions or methods." -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" files = [ @@ -873,7 +730,6 @@ dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "sphinx (<2)", "tox"] name = "deprecation" version = "2.1.0" description = "A library to handle automated deprecations" -category = "main" optional = false python-versions = "*" files = [ @@ -884,23 +740,10 @@ files = [ [package.dependencies] packaging = "*" -[[package]] -name = "distlib" -version = "0.3.7" -description = "Distribution utilities" -category = "main" -optional = false -python-versions = "*" -files = [ - {file = "distlib-0.3.7-py2.py3-none-any.whl", hash = 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Mungall Date: Fri, 2 Feb 2024 12:49:45 -0800 Subject: [PATCH 09/88] Adding LLMAnnotator (#126) * Adding LLMAnnotator * remove bioregistry * Ensure posix paths. Fixes #127 --- docs/conf.py | 10 +- docs/introduction.rst | 2 + docs/packages/annotators.rst | 5 +- docs/packages/importers.rst | 2 +- poetry.lock | 3449 ++++++++++------- pyproject.toml | 58 +- schema_automator/annotators/__init__.py | 3 +- .../annotators/jsonld_annotator.py | 4 +- schema_automator/annotators/llm_annotator.py | 78 + .../annotators/schema_annotator.py | 6 +- schema_automator/cli.py | 53 +- schema_automator/enhancer/__init__.py | 0 schema_automator/enhancer/general_enhancer.py | 17 - .../importers/dosdp_import_engine.py | 7 +- .../importers/jsonschema_import_engine.py | 2 +- .../importers/rdfs_import_engine.py | 2 + .../metamodels/dosdp/dosdp_linkml.yaml | 7 +- .../test_jsonschema_importer.py | 3 - 18 files changed, 2206 insertions(+), 1502 deletions(-) create mode 100644 schema_automator/annotators/llm_annotator.py delete mode 100644 schema_automator/enhancer/__init__.py delete mode 100644 schema_automator/enhancer/general_enhancer.py diff --git a/docs/conf.py b/docs/conf.py index 4bc31b9..b45bdcc 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -12,9 +12,9 @@ # import os import sys -import sphinx_pdj_theme +#import sphinx_pdj_theme -sys.path.insert(0, os.path.abspath('../..')) +sys.path.insert(0, os.path.abspath('..')) # -- Project information ----------------------------------------------------- @@ -66,10 +66,10 @@ # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. # -html_theme = 'sphinx_pdj_theme' -html_theme_path = [sphinx_pdj_theme.get_html_theme_path()] +#html_theme = 'sphinx_pdj_theme' +#html_theme_path = [sphinx_pdj_theme.get_html_theme_path()] # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". -html_static_path = ['_static'] \ No newline at end of file +html_static_path = ['_static'] diff --git a/docs/introduction.rst b/docs/introduction.rst index 97cf33f..af7d04a 100644 --- a/docs/introduction.rst +++ b/docs/introduction.rst @@ -30,6 +30,7 @@ See :ref:`importers` * OWL (but this only works for schema-style OWL) * JSON-Schema +* SQL DDL In future other frameworks will be supported @@ -42,6 +43,7 @@ Annotators to provide ways to automatically add metadata to your schema, includi * Assigning class or slot URIs to schema elements * Mapping enums to ontologies and vocabularies +* Annotate using Large Language Models (LLMs) General Utilities --------------------------------- diff --git a/docs/packages/annotators.rst b/docs/packages/annotators.rst index 5b87e44..2af0b92 100644 --- a/docs/packages/annotators.rst +++ b/docs/packages/annotators.rst @@ -17,7 +17,7 @@ of different sources that can be used for annotation, including: For documentation on selecting the right ontology source, see: -`Selectors `_ +- `Selectors `_ .. currentmodule:: schema_automator.annotators @@ -27,4 +27,5 @@ For documentation on selecting the right ontology source, see: .. autoclass:: JsonLdAnnotator :members: - +.. autoclass:: LLMAnnotator + :members: diff --git a/docs/packages/importers.rst b/docs/packages/importers.rst index cb40d42..1c48fc8 100644 --- a/docs/packages/importers.rst +++ b/docs/packages/importers.rst @@ -5,7 +5,7 @@ Importers Importers take either a representation of a schema in a different language or example data and bootstraps a schema. -Importers are the opposite of `Generalizers `_ in the core LinkML framework +Importers are the opposite of `Generators `_ in the core LinkML framework .. warning:: diff --git a/poetry.lock b/poetry.lock index acb53ef..b0c1185 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,9 +1,10 @@ -# This file is automatically @generated by Poetry 1.7.0 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. [[package]] name = "airium" version = "0.2.6" description = "Easy and quick html builder with natural syntax correspondence (python->html). No templates needed. Serves pure pythonic library with no dependencies." +category = "main" optional = false python-versions = "*" files = [ @@ -17,19 +18,21 @@ parse = ["beautifulsoup4 (>=4.10.0,<5.0)", "requests (>=2.12.0,<3)"] [[package]] name = "alabaster" -version = "0.7.13" -description = "A configurable sidebar-enabled Sphinx theme" +version = "0.7.16" +description = "A light, configurable Sphinx theme" +category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.9" files = [ - {file = "alabaster-0.7.13-py3-none-any.whl", hash = "sha256:1ee19aca801bbabb5ba3f5f258e4422dfa86f82f3e9cefb0859b283cdd7f62a3"}, - {file = "alabaster-0.7.13.tar.gz", hash = "sha256:a27a4a084d5e690e16e01e03ad2b2e552c61a65469419b907243193de1a84ae2"}, + {file = "alabaster-0.7.16-py3-none-any.whl", hash = "sha256:b46733c07dce03ae4e150330b975c75737fa60f0a7c591b6c8bf4928a28e2c92"}, + {file = "alabaster-0.7.16.tar.gz", hash = "sha256:75a8b99c28a5dad50dd7f8ccdd447a121ddb3892da9e53d1ca5cca3106d58d65"}, ] [[package]] name = "annotated-types" version = "0.6.0" description = "Reusable constraint types to use with typing.Annotated" +category = "main" optional = false python-versions = ">=3.8" files = [ @@ -41,6 +44,7 @@ files = [ name = "antlr4-python3-runtime" version = "4.9.3" description = "ANTLR 4.9.3 runtime for Python 3.7" +category = "main" optional = false python-versions = "*" files = [ @@ -49,29 +53,32 @@ files = [ [[package]] name = "anyio" -version = "4.0.0" +version = "4.2.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" +category = "dev" optional = false python-versions = ">=3.8" files = [ - 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packages = [ [tool.poetry.dependencies] python = "^3.9" -linkml = ">=1.5.4" -mkdocs = "^1.2.3" -pandas = "^1.3.5" -python-dateutil = "^2.8.2" -jsonpatch = "^1.32" -quantulum3 = "^0.7.9" -funowl = "^0.1.11" -click-log = "^0.4.0" +linkml = ">=1.6.7" +mkdocs = ">=1.2.3" +pandas = ">=1.3.5" +python-dateutil = ">=2.8.2" +jsonpatch = ">=1.32" +quantulum3 = ">=0.7.9" +funowl = ">=0.2.3" +click-log = ">=0.4.0" psycopg2-binary = "^2.9.2" -strsimpy = "^0.2.1" -requests = "^2.26.0" -oaklib = "^0.5" -pandera = "^0.12.0" -tomlkit = "^0.11.4" -inflect = "^6.0.0" -schemasheets = "^0.1.17" +strsimpy = ">=0.2.1" +requests = ">=2.26.0" +oaklib = ">=0.5.25" +pandera = ">=0.12.0" +tomlkit = ">=0.11.4" +inflect = ">=6.0.0" +schemasheets = ">=0.1.24" xmltodict = "^0.13.0" +click-default-group = "^1.2.4" [tool.poetry.dev-dependencies] -pytest = "^7.1.1" -Sphinx = "^4.4.0" -sphinx-pdj-theme = "^0.2.1" -sphinx-click = "^3.1.0" -sphinxcontrib-mermaid = "^0.7.1" -jupyter = "^1.0.0" -lxml = "^4.9.1" +pytest = ">=7.1.1" +Sphinx = ">=4.4.0" +sphinx-pdj-theme = ">=0.2.1" +sphinx-click = ">=3.1.0" +sphinxcontrib-mermaid = ">=0.7.1" +jupyter = ">=1.0.0" +lxml = ">=4.9.1" + +[tool.poetry.group.llm.dependencies] +llm = ">=0.12" [build-system] requires = ["poetry-core>=1.0.0"] @@ -46,16 +50,6 @@ build-backend = "poetry.core.masonry.api" [tool.poetry.scripts] schemauto = "schema_automator.cli:main" -tsv2linkml = "schema_automator.importers.csv_import_engine:tsv2model" -tsvs2linkml = "schema_automator.importers.csv_import_engine:tsvs2model" -enum_annotator = "schema_automator.annotators.enum_annotator:enum_annotator" -enums_to_curateable = "schema_automator.annotators.enums_to_curateable:enums_to_curateable" -curated_to_enums = "schema_automator.annotators.curated_to_enums:curated_to_enums" -rdf2linkml = "schema_automator.importers.rdf_instance_import_engine:rdf2model" -owl2linkml = "schema_automator.importers.owl_import_engine:owl2model" -dosdp2linkml = "schema_automator.importers.owl_import_engine:dosdp2model" -jsondata2linkml = "schema_automator.importers.json_instance_import_engine:json2model" -jsonschema2linkml = "schema_automator.importers.jsonschema_import_engine:jsonschema2model" extract-schema = "schema_automator.utils.schema_extractor:cli" [tool.poetry.extras] diff --git a/schema_automator/annotators/__init__.py b/schema_automator/annotators/__init__.py index 1bb4b07..66f2c4e 100644 --- a/schema_automator/annotators/__init__.py +++ b/schema_automator/annotators/__init__.py @@ -1,2 +1,3 @@ from schema_automator.annotators.schema_annotator import SchemaAnnotator -from schema_automator.annotators.jsonld_annotator import JsonLdAnnotator \ No newline at end of file +from schema_automator.annotators.jsonld_annotator import JsonLdAnnotator +from schema_automator.annotators.llm_annotator import LLMAnnotator diff --git a/schema_automator/annotators/jsonld_annotator.py b/schema_automator/annotators/jsonld_annotator.py index fea5559..03d934c 100644 --- a/schema_automator/annotators/jsonld_annotator.py +++ b/schema_automator/annotators/jsonld_annotator.py @@ -5,6 +5,8 @@ from linkml_runtime import SchemaView from linkml_runtime.linkml_model import SchemaDefinition, Definition, Prefix, DefinitionName +from schema_automator.annotators import SchemaAnnotator + JSON = Dict @@ -14,7 +16,7 @@ def is_url(/service/s: str) -> bool: else: return False -class JsonLdAnnotator: +class JsonLdAnnotator(SchemaAnnotator): """ Annotates a schema using URIs/Prefixes derived from a JSON-LD file """ diff --git a/schema_automator/annotators/llm_annotator.py b/schema_automator/annotators/llm_annotator.py new file mode 100644 index 0000000..c54dc99 --- /dev/null +++ b/schema_automator/annotators/llm_annotator.py @@ -0,0 +1,78 @@ +import logging +from dataclasses import dataclass +from typing import Union, Optional + +from linkml_runtime import SchemaView +from linkml_runtime.linkml_model import SchemaDefinition + +from schema_automator.annotators import SchemaAnnotator + +logger = logging.getLogger(__name__) + +SYSTEM_PROMPT = """ +You are a LinkML schema assistant and your job is to suggest +values for missing elements in the schema. +Schema details: {schema_info} +""" + +def enrich_using_llm(schema: Union[SchemaDefinition, str], model_name: str = None) -> SchemaDefinition: + """ + Use the LLM model to enrich the schema with descriptions for elements that are missing them. + + Requires installation with the llm extra. + + :param schema: + :param model_name: + :return: + """ + from llm import get_model, Conversation + if not model_name: + model_name = "gpt-4-turbo" + model = get_model(model_name) + sv = SchemaView(schema) + schema = sv.schema + schema_info =f"name: {schema.name}, description: {schema.description}" + system_prompt = SYSTEM_PROMPT.format(schema_info=schema_info) + logger.info(f"System: {system_prompt}") + for elt in sv.all_elements().values(): + typ = elt.__class__.__name__ + if not elt.description: + prompt = (f"Generate a description for the {typ} with name '{elt.name}'" + "The description should be a concise phrase that describes the element.") + conversation = Conversation(model=model) + result = conversation.prompt(prompt, system_prompt) + elt.description = result.text() + logger.debug(f"Updated Description: {elt.description}") + return schema + + +@dataclass +class LLMAnnotator(SchemaAnnotator): + """ + Annotates a schema using an LLM. + """ + + model_name: Optional[str] = None + + def enrich(self, schema: Union[SchemaDefinition, str]) -> SchemaDefinition: + """ + Enrich a schema using an LLM. + + >>> from schema_automator.utils.schemautils import write_schema + >>> annotator = LLMAnnotator(model_name="gpt-4") + >>> schema = annotator.enrich("tests/resources/biopax3.yaml") + >>> write_schema(schema) + + Requires installation with the llm extra: + + .. code-block:: bash + + pip install schema-automator[llm] + + Note: exercise caution on running this on large schemas with expensive + models like gpt-4. + + :param schema: + :return: + """ + return enrich_using_llm(schema, model_name=self.model_name) diff --git a/schema_automator/annotators/schema_annotator.py b/schema_automator/annotators/schema_annotator.py index cc68c13..514301a 100644 --- a/schema_automator/annotators/schema_annotator.py +++ b/schema_automator/annotators/schema_annotator.py @@ -31,7 +31,7 @@ class SchemaAnnotator: A SchemaAnnotator wraps an OAK ontology interface. See `OAK documentation `_ for more details """ - ontology_implementation: BasicOntologyInterface + ontology_implementation: BasicOntologyInterface = None mine_descriptions: bool = False allow_partial: bool = False curie_only: bool = True @@ -191,7 +191,9 @@ def _add_description_from_curies(self, elt: Union[Element, PermissibleValue], cu @click.option('--output', '-o', help="Path to saved yaml schema") def annotate_schema(schema: str, input: str, output: str, **args): """ - Annotate all elements of a schema + Annotate all elements of a schema. + + DEPRECATED: use main schemauto CLI instead """ logging.basicConfig(level=logging.INFO) annr = SchemaAnnotator() diff --git a/schema_automator/cli.py b/schema_automator/cli.py index ccd5bc3..e4e0d34 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -7,13 +7,15 @@ import os import click + import pandas as pd import yaml from linkml_runtime.linkml_model import SchemaDefinition -from oaklib.selector import get_resource_from_shorthand, get_implementation_from_shorthand +from oaklib.selector import get_implementation_from_shorthand from schema_automator import JsonLdAnnotator, FrictionlessImportEngine +from schema_automator.annotators import llm_annotator from schema_automator.annotators.schema_annotator import SchemaAnnotator from schema_automator.generalizers.csv_data_generalizer import CsvDataGeneralizer from schema_automator.generalizers.generalizer import DEFAULT_CLASS_NAME, DEFAULT_SCHEMA_NAME @@ -26,7 +28,7 @@ from schema_automator.importers.rdfs_import_engine import RdfsImportEngine from schema_automator.importers.sql_import_engine import SqlImportEngine from schema_automator.importers.tabular_import_engine import TableImportEngine -from schema_automator.utils.schemautils import minify_schema, write_schema +from schema_automator.utils.schemautils import write_schema input_option = click.option( "-i", @@ -507,13 +509,13 @@ def annotate_schema(schema: str, input: str, output: str, **kwargs): schema = annr.annotate_schema(schema) write_schema(schema, output) - @main.command() +#@main.command() @click.argument('schema') @click.option('--input', '-i', help="OAK input ontology selector") @click.option('--annotate/--no-annotate', default=True, help="If true, annotate the schema") @output_option -def enrich_schema(schema: str, input: str, output: str, annotate: bool, **args): +def enrich_using_ontology(schema: str, input: str, output: str, annotate: bool, **args): """ Enrich a schema using an ontology. @@ -523,18 +525,28 @@ def enrich_schema(schema: str, input: str, output: str, annotate: bool, **args): This will use OAK to add additional metadata using uris and mappings in the schema. + See the OAK docs for options for which annotators to use; examples include: + + - bioportal: # (include the colon) any ontology in bioportal + + - bioportal:umls # a specific ontology in bioportal + + - my.obo # any local OBO file + + - sqlite:obo:cl # a specific OBO file or semsql registered ontology + For example, if your schema has a class with a mapping to a SO class, then the definition of that will be copied to the class description. - + Example: - schemauto enrich-schema -i bioportal: my-schema.yaml -o my-enriched.yaml + schemauto enrich-using-ontology -i bioportal: my-schema.yaml -o my-enriched.yaml If your schema has no mappings you can use --annotate to add them Example: - schemauto enrich-schema -i so.obo --annotate my-schema.yaml -o my-enriched.yaml --annotate + schemauto enrich-using-ontology -i so.obo --annotate my-schema.yaml -o my-enriched.yaml --annotate """ impl = get_implementation_from_shorthand(input) annr = SchemaAnnotator(impl) @@ -545,6 +557,33 @@ def enrich_schema(schema: str, input: str, output: str, annotate: bool, **args): write_schema(schema, output) +@main.command() +@click.option('--model', '-m', help="Name of model") +@output_option +@click.argument('schema') +def enrich_using_llm(schema: str, model: str, output: str, **args): + """ + Enrich a schema using an LLM. + + Example: + + schemauto enrich-using-llm -m gpt-4-turbo my-schema.yaml -o my-enriched.yaml + + This will enrich the schema by adding missing description fields. In future + other enrichments may be possible. + + Note for this to work, you will need to have LLM installed as an extra. + + Example: + + pip install schema-automator[llm] + + """ + logging.info(f"Enriching: {schema}") + schema = llm_annotator.enrich_using_llm(schema, model) + write_schema(schema, output) + + @main.command() @click.argument('schema') @output_option diff --git a/schema_automator/enhancer/__init__.py b/schema_automator/enhancer/__init__.py deleted file mode 100644 index e69de29..0000000 diff --git a/schema_automator/enhancer/general_enhancer.py b/schema_automator/enhancer/general_enhancer.py deleted file mode 100644 index bb856c2..0000000 --- a/schema_automator/enhancer/general_enhancer.py +++ /dev/null @@ -1,17 +0,0 @@ -from dataclasses import dataclass - - -@dataclass -class GeneralSchemaEnhancer: - """ - Main functions have moved to core linkml, see https://github.com/linkml/linkml/pull/854 - - This is currently a stub for future enhancements - """ - pass - - - - - - diff --git a/schema_automator/importers/dosdp_import_engine.py b/schema_automator/importers/dosdp_import_engine.py index 9b49c09..c9010ad 100644 --- a/schema_automator/importers/dosdp_import_engine.py +++ b/schema_automator/importers/dosdp_import_engine.py @@ -139,9 +139,10 @@ def deref_class(name: ALIAS) -> CURIE: rangedef = ClassDefinition(camelcase(f'{range_base_name} class')) #rangedef.is_a = METACLASS rangedef.mixins = [GROUPING_CLASS] - subc_slot = SlotDefinition('subclass_of', - has_member=AnonymousSlotExpression(equals_string=var_range_as_curie)) - rangedef.slot_usage[subc_slot.name] = subc_slot + # TODO: restore when owlgen fixed + #subc_slot = SlotDefinition('subclass_of', + # has_member=AnonymousSlotExpression(equals_string=var_range_as_curie)) + #rangedef.slot_usage[subc_slot.name] = subc_slot extra_classes.append(rangedef) rangedef.description = f'Any subclass of {var_range_as_curie} ({v.range})' slot = SlotDefinition(vn, range=rangedef.name) diff --git a/schema_automator/importers/jsonschema_import_engine.py b/schema_automator/importers/jsonschema_import_engine.py index d43141c..de7cd89 100644 --- a/schema_automator/importers/jsonschema_import_engine.py +++ b/schema_automator/importers/jsonschema_import_engine.py @@ -62,7 +62,7 @@ def import_project(self, import_directory: str, export_directory: str, match_suf for item in path.rglob("*"): if str(item).endswith(match_suffix): relpath = item.relative_to(path) - module_name = str(relpath.with_suffix("")) + module_name = str(relpath.with_suffix("").as_posix()) module_name_safe = "-".join(relpath.with_suffix("").parts) logging.info(f"Converting {item} => {module_name_safe}") schema = self.convert(str(item), name=module_name_safe, **kwargs) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index c1ef959..b9e934c 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -107,6 +107,8 @@ def convert( sb.add_defaults() schema = sb.schema for k, v in g.namespaces(): + if k == "schema" and v != "http://schema.org/": + continue sb.add_prefix(k, v, replace_if_present=True) if default_prefix is not None: schema.default_prefix = default_prefix diff --git a/schema_automator/metamodels/dosdp/dosdp_linkml.yaml b/schema_automator/metamodels/dosdp/dosdp_linkml.yaml index a4029a3..ce78644 100644 --- a/schema_automator/metamodels/dosdp/dosdp_linkml.yaml +++ b/schema_automator/metamodels/dosdp/dosdp_linkml.yaml @@ -14,6 +14,7 @@ default_prefix: dosdp classes: Pattern: + tree_root: true slots: - pattern_name - pattern_iri @@ -43,7 +44,7 @@ classes: - disjointWith - name - comment - - definition + - def - namespace - exact_synonym - narrow_synonym @@ -149,7 +150,7 @@ classes: range: PrintfAnnotationObo comment: range: PrintfAnnotationObo - definition: + def: range: PrintfAnnotationObo namespace: range: PrintfAnnotationObo @@ -551,7 +552,7 @@ slots: range: PrintfAnnotationObo comment: range: PrintfAnnotationObo - definition: + def: range: PrintfAnnotationObo namespace: range: PrintfAnnotationObo diff --git a/tests/test_importers/test_jsonschema_importer.py b/tests/test_importers/test_jsonschema_importer.py index c59b337..169a68d 100644 --- a/tests/test_importers/test_jsonschema_importer.py +++ b/tests/test_importers/test_jsonschema_importer.py @@ -112,14 +112,11 @@ def test_import_hca_project(self): import_path = Path(INPUT_DIR) / "hca" export_path = Path(OUTPUT_DIR) / "hca" root_path = ie.import_project(import_path, export_path, name="hca") - print(root_path) sv = SchemaView(root_path) c = sv.get_class("OrganPartOntology") ont_slot = c.attributes["ontology"] rng = ont_slot.range edef = sv.get_enum(rng) - print(yaml_dumper.dumps(edef)) - print(yaml_dumper.dumps(c)) self.assertEqual(2, len(edef.include)) self.assertIsNotNone(ont_slot.title) jsonschema_str = JsonSchemaGenerator(root_path).serialize() From e9bbd5258e9a61fe94cb1d3a28a4cfb8ff6f6cd2 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Fri, 2 Feb 2024 13:03:15 -0800 Subject: [PATCH 10/88] Adding myst parser (#128) --- poetry.lock | 86 +++++++++++++++++++++++++++++++++++++++++++++++++- pyproject.toml | 1 + 2 files changed, 86 insertions(+), 1 deletion(-) diff --git a/poetry.lock b/poetry.lock index b0c1185..b9e44d5 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2454,6 +2454,31 @@ importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""} docs = ["mdx-gh-links (>=0.2)", "mkdocs (>=1.5)", "mkdocs-gen-files", "mkdocs-literate-nav", "mkdocs-nature (>=0.6)", "mkdocs-section-index", "mkdocstrings[python]"] testing = ["coverage", "pyyaml"] +[[package]] +name = "markdown-it-py" +version = "3.0.0" +description = "Python port of markdown-it. Markdown parsing, done right!" +category = "dev" +optional = false +python-versions = ">=3.8" +files = [ + {file = "markdown-it-py-3.0.0.tar.gz", hash = "sha256:e3f60a94fa066dc52ec76661e37c851cb232d92f9886b15cb560aaada2df8feb"}, + {file = "markdown_it_py-3.0.0-py3-none-any.whl", hash = "sha256:355216845c60bd96232cd8d8c40e8f9765cc86f46880e43a8fd22dc1a1a8cab1"}, +] + +[package.dependencies] +mdurl = ">=0.1,<1.0" + +[package.extras] +benchmarking = ["psutil", "pytest", "pytest-benchmark"] +code-style = ["pre-commit (>=3.0,<4.0)"] +compare = ["commonmark (>=0.9,<1.0)", "markdown (>=3.4,<4.0)", "mistletoe (>=1.0,<2.0)", "mistune (>=2.0,<3.0)", "panflute (>=2.3,<3.0)"] +linkify = ["linkify-it-py (>=1,<3)"] +plugins = ["mdit-py-plugins"] +profiling = ["gprof2dot"] +rtd = ["jupyter_sphinx", "mdit-py-plugins", "myst-parser", "pyyaml", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinx_book_theme"] +testing = ["coverage", "pytest", "pytest-cov", "pytest-regressions"] + [[package]] name = "markupsafe" version = "2.1.5" @@ -2539,6 +2564,38 @@ files = [ [package.dependencies] traitlets = "*" +[[package]] +name = "mdit-py-plugins" +version = "0.4.0" +description = "Collection of plugins for markdown-it-py" +category = "dev" +optional = false +python-versions = ">=3.8" +files = [ + {file = "mdit_py_plugins-0.4.0-py3-none-any.whl", hash = "sha256:b51b3bb70691f57f974e257e367107857a93b36f322a9e6d44ca5bf28ec2def9"}, + {file = "mdit_py_plugins-0.4.0.tar.gz", hash = "sha256:d8ab27e9aed6c38aa716819fedfde15ca275715955f8a185a8e1cf90fb1d2c1b"}, +] + +[package.dependencies] +markdown-it-py = ">=1.0.0,<4.0.0" + +[package.extras] +code-style = ["pre-commit"] +rtd = ["myst-parser", "sphinx-book-theme"] +testing = ["coverage", "pytest", "pytest-cov", "pytest-regressions"] + +[[package]] +name = "mdurl" +version = "0.1.2" +description = "Markdown URL utilities" +category = "dev" +optional = false +python-versions = ">=3.7" +files = [ + {file = "mdurl-0.1.2-py3-none-any.whl", hash = "sha256:84008a41e51615a49fc9966191ff91509e3c40b939176e643fd50a5c2196b8f8"}, + {file = "mdurl-0.1.2.tar.gz", hash = "sha256:bb413d29f5eea38f31dd4754dd7377d4465116fb207585f97bf925588687c1ba"}, +] + [[package]] name = "mergedeep" version = "1.3.4" @@ -2701,6 +2758,33 @@ files = [ {file = "mypy_extensions-1.0.0.tar.gz", hash = "sha256:75dbf8955dc00442a438fc4d0666508a9a97b6bd41aa2f0ffe9d2f2725af0782"}, ] +[[package]] +name = "myst-parser" +version = "2.0.0" +description = "An extended [CommonMark](https://spec.commonmark.org/) compliant parser," +category = "dev" +optional = false +python-versions = ">=3.8" +files = [ + {file = "myst_parser-2.0.0-py3-none-any.whl", hash = "sha256:7c36344ae39c8e740dad7fdabf5aa6fc4897a813083c6cc9990044eb93656b14"}, + {file = "myst_parser-2.0.0.tar.gz", hash = "sha256:ea929a67a6a0b1683cdbe19b8d2e724cd7643f8aa3e7bb18dd65beac3483bead"}, +] + +[package.dependencies] +docutils = ">=0.16,<0.21" +jinja2 = "*" +markdown-it-py = ">=3.0,<4.0" +mdit-py-plugins = ">=0.4,<1.0" +pyyaml = "*" +sphinx = ">=6,<8" + +[package.extras] +code-style = ["pre-commit (>=3.0,<4.0)"] +linkify = ["linkify-it-py (>=2.0,<3.0)"] +rtd = ["ipython", "pydata-sphinx-theme (==v0.13.0rc4)", "sphinx-autodoc2 (>=0.4.2,<0.5.0)", "sphinx-book-theme (==1.0.0rc2)", "sphinx-copybutton", "sphinx-design2", "sphinx-pyscript", "sphinx-tippy (>=0.3.1)", "sphinx-togglebutton", "sphinxext-opengraph (>=0.8.2,<0.9.0)", "sphinxext-rediraffe (>=0.2.7,<0.3.0)"] +testing = ["beautifulsoup4", "coverage[toml]", "pytest (>=7,<8)", "pytest-cov", "pytest-param-files (>=0.3.4,<0.4.0)", "pytest-regressions", "sphinx-pytest"] +testing-docutils = ["pygments", "pytest (>=7,<8)", "pytest-param-files (>=0.3.4,<0.4.0)"] + [[package]] name = "nbclient" version = "0.9.0" @@ -6148,4 +6232,4 @@ mariadb = [] [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "b997bfe6a8abad852b85391e0de9936bac0fdfd414242fd5fbf6bfe3b72b7017" +content-hash = "aa42b17728a537c7280bef75424c81b662d903d13f91ca16afff450646ecd562" diff --git a/pyproject.toml b/pyproject.toml index 11f4f59..fe7418c 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -38,6 +38,7 @@ Sphinx = ">=4.4.0" sphinx-pdj-theme = ">=0.2.1" sphinx-click = ">=3.1.0" sphinxcontrib-mermaid = ">=0.7.1" +myst-parser = "*" jupyter = ">=1.0.0" lxml = ">=4.9.1" From 6186a493bdec4f28f546810abcd5ea9057da972c Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Mon, 26 Feb 2024 13:43:16 -0800 Subject: [PATCH 11/88] cadsr importer (#132) * Adding caDSR CDE ingester * docs * Adding models * pytestified test_rdfs_importer. Fixed rdfs import bug --- poetry.lock | 609 ++- pyproject.toml | 3 +- schema_automator/cli.py | 24 + .../importers/cadsr_import_engine.py | 184 + .../importers/rdfs_import_engine.py | 7 + schema_automator/metamodels/cadsr.py | 2708 ++++++++++ schema_automator/metamodels/cadsr.yaml | 1307 +++++ tests/resources/cadsr-cde-12137353.json | 4603 +++++++++++++++++ tests/resources/cadsr-cde-217609.json | 0 tests/resources/cadsr-cde-2179609.json | 1300 +++++ tests/resources/cadsr-cde-2721353.json | 553 ++ tests/resources/cadsr-cde-2724331.json | 796 +++ tests/resources/cadsr-cde-996.json | 1 + tests/resources/cadsr-swagger.json | 1436 +++++ tests/test_importers/test_cadsr_importer.py | 26 + tests/test_importers/test_rdfs_importer.py | 31 +- 16 files changed, 13302 insertions(+), 286 deletions(-) create mode 100644 schema_automator/importers/cadsr_import_engine.py create mode 100644 schema_automator/metamodels/cadsr.py create mode 100644 schema_automator/metamodels/cadsr.yaml create mode 100644 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Notebook" category = "dev" optional = false python-versions = ">=3.7" files = [ - {file = "widgetsnbextension-4.0.9-py3-none-any.whl", hash = "sha256:91452ca8445beb805792f206e560c1769284267a30ceb1cec9f5bcc887d15175"}, - {file = "widgetsnbextension-4.0.9.tar.gz", hash = "sha256:3c1f5e46dc1166dfd40a42d685e6a51396fd34ff878742a3e47c6f0cc4a2a385"}, + {file = "widgetsnbextension-4.0.10-py3-none-any.whl", hash = "sha256:d37c3724ec32d8c48400a435ecfa7d3e259995201fbefa37163124a9fcb393cc"}, + {file = "widgetsnbextension-4.0.10.tar.gz", hash = "sha256:64196c5ff3b9a9183a8e699a4227fb0b7002f252c814098e66c4d1cd0644688f"}, ] [[package]] @@ -6232,4 +6291,4 @@ mariadb = [] [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "aa42b17728a537c7280bef75424c81b662d903d13f91ca16afff450646ecd562" +content-hash = "edb0658566f95ab75690a51a7abe039c30734f24cf81a5ab0e670d1693755be2" diff --git a/pyproject.toml b/pyproject.toml index fe7418c..7196930 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -12,7 +12,7 @@ packages = [ [tool.poetry.dependencies] python = "^3.9" -linkml = ">=1.6.7" +linkml = "^1.7.4" mkdocs = ">=1.2.3" pandas = ">=1.3.5" python-dateutil = ">=2.8.2" @@ -30,6 +30,7 @@ inflect = ">=6.0.0" schemasheets = ">=0.1.24" xmltodict = "^0.13.0" click-default-group = "^1.2.4" +linkml-runtime = "^1.7.2" [tool.poetry.dev-dependencies] diff --git a/schema_automator/cli.py b/schema_automator/cli.py index e4e0d34..c4e47ef 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -5,6 +5,8 @@ """ import logging import os +from pathlib import Path + import click @@ -20,6 +22,7 @@ from schema_automator.generalizers.csv_data_generalizer import CsvDataGeneralizer from schema_automator.generalizers.generalizer import DEFAULT_CLASS_NAME, DEFAULT_SCHEMA_NAME from schema_automator.generalizers.pandas_generalizer import PandasDataGeneralizer +from schema_automator.importers.cadsr_import_engine import CADSRImportEngine from schema_automator.importers.dosdp_import_engine import DOSDPImportEngine from schema_automator.generalizers.json_instance_generalizer import JsonDataGeneralizer from schema_automator.importers.jsonschema_import_engine import JsonSchemaImportEngine @@ -387,6 +390,27 @@ def import_frictionless(input, output, schema_name, schema_id, **kwargs): write_schema(schema, output) +@main.command() +@output_option +@schema_name_option +@schema_id_option +@click.argument('input') +def import_cadsr(input, output, schema_name, schema_id, **kwargs): + """ + Imports from CADSR CDE JSON API output to LinkML + + See :ref:`importers` for more on the importer framework + + Example: + + schemauto import-cadsr "cdes/*.json" + """ + ie = CADSRImportEngine() + paths = [str(gf.absolute()) for gf in Path().glob(input) if gf.is_file()] + schema = ie.convert(paths, name=schema_name, id=schema_id) + write_schema(schema, output) + + @main.command() @click.argument('owlfile') @output_option diff --git a/schema_automator/importers/cadsr_import_engine.py b/schema_automator/importers/cadsr_import_engine.py new file mode 100644 index 0000000..0ec7ac1 --- /dev/null +++ b/schema_automator/importers/cadsr_import_engine.py @@ -0,0 +1,184 @@ +""" +CADSR CDE Import Engine + +This ingests the output of the caDSR API https://cadsrapi.cancer.gov/rad/NCIAPI/1.0/api +""" +import logging +import urllib +from typing import Union, Dict, Tuple, List, Any, Optional, Iterable + +from dataclasses import dataclass + +from linkml.utils.schema_builder import SchemaBuilder +from linkml_runtime.linkml_model import Annotation +from linkml_runtime.linkml_model.meta import SchemaDefinition, SlotDefinition, EnumDefinition, \ + PermissibleValue, UniqueKey, ClassDefinition +from linkml_runtime.loaders import json_loader +from linkml_runtime.utils.formatutils import camelcase, underscore + +from schema_automator.importers.import_engine import ImportEngine +import schema_automator.metamodels.cadsr as cadsr + + +TMAP = { + "DATE": "date", + "NUMBER": "float", + "ALPHANUMERIC": "string", + "CHARACTER": "string", + "HL7EDv3": "string", + "HL7CDv3": "string", + "java.lang.Double": "float", + "Numeric Alpha DVG": "float", + "SAS Date": "string", + "java.util.Date": "date", + "DATE/TIME": "datetime", + "TIME": "time", + "Integer": "integer", + "java.lang.Integer": "integer", + "Floating-point": "float", +} + +@dataclass +class CADSRImportEngine(ImportEngine): + """ + An ImportEngine that imports NCI CADSR CDEs + + Ingests the output of `caDSR API `_. + + - Each CDE becomes a unique slot + - the CDE is added as a lot of a context-specific class + - the context-specific class is a subclass of the CDE's DataElementConcept + + Note that this creates a lot of 1-1 classes, as in many cases there is no + attempt to group concepts. However, this is not always the case. + + E.g. the concept with publicId 2012668 (Access Route) is used in 5 contexts + (AHRQ, CCR, ...) + + Each context-specific concept has its own set of CDEs + + See also https://github.com/monarch-initiative/cde-harmonization + """ + + def convert(self, paths: Iterable[str], id: str=None, name: str=None, **kwargs) -> SchemaDefinition: + """ + Converts one or more CDE JSON files into LinkML + + :param files: + :param kwargs: + :return: + """ + sb = SchemaBuilder() + schema = sb.schema + if id: + schema.id = id + if not name: + name = package.name + if name: + schema.name = name + classes = {} + slots = {} + enums = {} + for path in paths: + logging.info(f"Loading {path}") + with (open(path) as file): + container: cadsr.DataElementContainer + container = json_loader.load(file, target_class=cadsr.DataElementContainer) + cde = container.DataElement + ctxt = cde.context + source = urllib.parse.quote(ctxt) + source = f"cadsr:{source}" + slot = SlotDefinition( + name=urllib.parse.quote(underscore(f"{ctxt} {cde.preferredName}")), + slot_uri=f"cadsr:{cde.publicId}", + title=cde.preferredName, + description=cde.preferredDefinition, + aliases=[cde.longName], + source=source, + ) + slots[slot.name] = slot + concept = cde.DataElementConcept + concept_name = urllib.parse.quote(camelcase(f"{ctxt} {concept.preferredName}")) + parent_concept_name = urllib.parse.quote(camelcase(concept.longName)) + if parent_concept_name not in classes: + parent_cls = ClassDefinition( + name=parent_concept_name, + title=concept.preferredName, + description=concept.preferredDefinition, + #aliases=[concept.longName], + class_uri=f"cadsr:{concept.publicId}", + ) + classes[parent_concept_name] = parent_cls + if concept_name not in classes: + cls = ClassDefinition( + name=concept_name, + title=f"{concept.preferredName} ({ctxt})", + description=concept.preferredDefinition, + aliases=[concept.longName], + class_uri=f"cadsr:{concept.publicId}", + is_a=parent_concept_name, + ) + classes[concept_name] = cls + else: + cls = classes[concept_name] + cls.slots.append(slot.name) + objectClass = concept.ObjectClass + # TODO + valueDomain = cde.ValueDomain + conceptualDomain = valueDomain.ConceptualDomain + pvs = valueDomain.PermissibleValues + if pvs: + enum_name = urllib.parse.quote(camelcase(valueDomain.preferredName)) + enum = EnumDefinition( + name=enum_name, + title=valueDomain.preferredName, + description=valueDomain.preferredDefinition, + aliases=[valueDomain.longName], + # enum_uri=f"cadsr:{valueDomain.publicId}", + ) + enums[enum_name] = enum + rng = enum_name + for pv in pvs: + # url encode the value to escape symbols like <, >, etc. + pv_value = urllib.parse.quote(pv.value) + tgt_pv = PermissibleValue( + text=pv_value, + title=pv.value, + description=pv.valueDescription, + ) + enum.permissible_values[tgt_pv.text] = tgt_pv + vm = pv.ValueMeaning + tgt_pv.title = vm.preferredName + if not tgt_pv.description: + tgt_pv.description = vm.preferredDefinition + for c in vm.Concepts: + code = c.conceptCode.strip() + tgt_pv.meaning = f"NCIT:{code}" + else: + datatype = valueDomain.dataType + rng = TMAP.get(datatype, "string") + slot.range = rng + anns = [] + for rd in cde.ReferenceDocuments: + rf_type = urllib.parse.quote(underscore(rd.type)) + anns.append(Annotation( + tag=rf_type, + value=rd.description, + )) + for ann in anns: + slot.annotations[ann.tag] = ann + + sb.add_prefix("NCIT", "http://purl.obolibrary.org/obo/NCIT_") + sb.add_prefix("cadsr", "http://example.org/cadsr/") + sb.add_defaults() + for c in schema.classes.values(): + c.from_schema = 'http://example.org/' + schema = sb.schema + schema.classes = classes + schema.slots = slots + schema.enums = enums + return schema + + + + diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index b9e934c..a51c5a5 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -5,6 +5,7 @@ from collections import defaultdict from linkml.utils.schema_builder import SchemaBuilder +from linkml_runtime import SchemaView from linkml_runtime.linkml_model import ( SchemaDefinition, SlotDefinition, @@ -50,9 +51,12 @@ class RdfsImportEngine(ImportEngine): reverse_metamodel_mappings: Dict[URIRef, List[str]] = None include_unmapped_annotations = False metamodel = None + metamodel_schemaview: SchemaView = None + classdef_slots: List[str] = None def __post_init__(self): sv = package_schemaview("linkml_runtime.linkml_model.meta") + self.metamodel_schemaview = sv self.metamodel = sv self.metamodel_mappings = defaultdict(list) self.reverse_metamodel_mappings = defaultdict(list) @@ -73,6 +77,7 @@ def __post_init__(self): mappings.append(uri) self.reverse_metamodel_mappings[uri].append(e.name) self.metamodel_mappings[e.name] = mappings + self.defclass_slots = [s.name for s in sv.class_induced_slots(ClassDefinition.class_name)] def convert( self, @@ -180,6 +185,8 @@ def _dict_for_subject(self, g: Graph, s: URIRef) -> Dict[str, Any]: if pp == RDF.type: continue metaslot_name = self._element_from_iri(pp) + if metaslot_name not in self.defclass_slots: + continue if metaslot_name is None: logging.warning(f"Not mapping {pp}") continue diff --git a/schema_automator/metamodels/cadsr.py b/schema_automator/metamodels/cadsr.py new file mode 100644 index 0000000..a115d4e --- /dev/null +++ b/schema_automator/metamodels/cadsr.py @@ -0,0 +1,2708 @@ +# Auto generated from cadsr.yaml by pythongen.py version: 0.0.1 +# Generation date: 2024-02-24T19:17:52 +# Schema: cadsr +# +# id: https://example.org/cadsr +# description: +# license: https://creativecommons.org/publicdomain/zero/1.0/ + +import dataclasses +import re +from jsonasobj2 import JsonObj, as_dict +from typing import Optional, List, Union, Dict, ClassVar, Any +from dataclasses import dataclass +from linkml_runtime.linkml_model.meta import EnumDefinition, PermissibleValue, PvFormulaOptions + +from linkml_runtime.utils.slot import Slot +from linkml_runtime.utils.metamodelcore import empty_list, empty_dict, bnode +from linkml_runtime.utils.yamlutils import YAMLRoot, extended_str, extended_float, extended_int +from linkml_runtime.utils.dataclass_extensions_376 import dataclasses_init_fn_with_kwargs +from linkml_runtime.utils.formatutils import camelcase, underscore, sfx +from linkml_runtime.utils.enumerations import EnumDefinitionImpl +from rdflib import Namespace, URIRef +from linkml_runtime.utils.curienamespace import CurieNamespace +from linkml_runtime.linkml_model.types import String + +metamodel_version = "1.7.0" +version = None + +# Overwrite dataclasses _init_fn to add **kwargs in __init__ +dataclasses._init_fn = dataclasses_init_fn_with_kwargs + +# Namespaces +CADSR = CurieNamespace('cadsr', 'https://example.org/cadsr') +LINKML = CurieNamespace('linkml', 'https://w3id.org/linkml/') +DEFAULT_ = CADSR + + +# Types + +# Class references + + + +@dataclass +class DataElementContainer(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElementContainer"] + class_class_curie: ClassVar[str] = "cadsr:DataElementContainer" + class_name: ClassVar[str] = "DataElementContainer" + class_model_uri: ClassVar[URIRef] = CADSR.DataElementContainer + + DataElement: Optional[Union[dict, "DataElement"]] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.DataElement is not None and not isinstance(self.DataElement, DataElement): + self.DataElement = DataElement(**as_dict(self.DataElement)) + + super().__post_init__(**kwargs) + + +@dataclass +class ClassificationScheme(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["ClassificationScheme"] + class_class_curie: ClassVar[str] = "cadsr:ClassificationScheme" + class_name: ClassVar[str] = "ClassificationScheme" + class_model_uri: ClassVar[URIRef] = CADSR.ClassificationScheme + + publicId: Optional[str] = None + version: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + ClassificationSchemeItems: Optional[Union[Union[dict, "ClassificationSchemeItem"], List[Union[dict, "ClassificationSchemeItem"]]]] = empty_list() + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if not isinstance(self.ClassificationSchemeItems, list): + self.ClassificationSchemeItems = [self.ClassificationSchemeItems] if self.ClassificationSchemeItems is not None else [] + self.ClassificationSchemeItems = [v if isinstance(v, ClassificationSchemeItem) else ClassificationSchemeItem(**as_dict(v)) for v in self.ClassificationSchemeItems] + + super().__post_init__(**kwargs) + + +@dataclass +class Property(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["Property"] + class_class_curie: ClassVar[str] = "cadsr:Property" + class_name: ClassVar[str] = "Property" + class_model_uri: ClassVar[URIRef] = CADSR.Property + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + preferredDefinition: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + contextVersion: Optional[str] = None + Concepts: Optional[Union[Union[dict, "Concept"], List[Union[dict, "Concept"]]]] = empty_list() + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeDescription: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if not isinstance(self.Concepts, list): + self.Concepts = [self.Concepts] if self.Concepts is not None else [] + self.Concepts = [v if isinstance(v, Concept) else Concept(**as_dict(v)) for v in self.Concepts] + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeDescription is not None and not isinstance(self.changeDescription, str): + self.changeDescription = str(self.changeDescription) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class DataElementpublicIdGETResponse(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElementpublicIdGETResponse"] + class_class_curie: ClassVar[str] = "cadsr:DataElementpublicIdGETResponse" + class_name: ClassVar[str] = "DataElementpublicId_GET_response" + class_model_uri: ClassVar[URIRef] = CADSR.DataElementpublicIdGETResponse + + DataElement: Optional[Union[dict, "DataElement"]] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.DataElement is not None and not isinstance(self.DataElement, DataElement): + self.DataElement = DataElement(**as_dict(self.DataElement)) + + super().__post_init__(**kwargs) + + +@dataclass +class DataElementgetCRDCListGETResponse(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElementgetCRDCListGETResponse"] + class_class_curie: ClassVar[str] = "cadsr:DataElementgetCRDCListGETResponse" + class_name: ClassVar[str] = "DataElementgetCRDCList_GET_response" + class_model_uri: ClassVar[URIRef] = CADSR.DataElementgetCRDCListGETResponse + + CRDCDataElements: Optional[Union[Union[dict, "CRDCDataElement"], List[Union[dict, "CRDCDataElement"]]]] = empty_list() + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if not isinstance(self.CRDCDataElements, list): + self.CRDCDataElements = [self.CRDCDataElements] if self.CRDCDataElements is not None else [] + self.CRDCDataElements = [v if isinstance(v, CRDCDataElement) else CRDCDataElement(**as_dict(v)) for v in self.CRDCDataElements] + + super().__post_init__(**kwargs) + + +@dataclass +class DataElementqueryContextGETResponse(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElementqueryContextGETResponse"] + class_class_curie: ClassVar[str] = "cadsr:DataElementqueryContextGETResponse" + class_name: ClassVar[str] = "DataElementqueryContext_GET_response" + class_model_uri: ClassVar[URIRef] = CADSR.DataElementqueryContextGETResponse + + numRecords: Optional[str] = None + DataElementQueryResults: Optional[Union[Union[dict, "DataElementQuery"], List[Union[dict, "DataElementQuery"]]]] = empty_list() + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.numRecords is not None and not isinstance(self.numRecords, str): + self.numRecords = str(self.numRecords) + + if not isinstance(self.DataElementQueryResults, list): + self.DataElementQueryResults = [self.DataElementQueryResults] if self.DataElementQueryResults is not None else [] + self.DataElementQueryResults = [v if isinstance(v, DataElementQuery) else DataElementQuery(**as_dict(v)) for v in self.DataElementQueryResults] + + super().__post_init__(**kwargs) + + +@dataclass +class AlternateName(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["AlternateName"] + class_class_curie: ClassVar[str] = "cadsr:AlternateName" + class_name: ClassVar[str] = "AlternateName" + class_model_uri: ClassVar[URIRef] = CADSR.AlternateName + + name: Optional[str] = None + type: Optional[str] = None + context: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.name is not None and not isinstance(self.name, str): + self.name = str(self.name) + + if self.type is not None and not isinstance(self.type, str): + self.type = str(self.type) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + super().__post_init__(**kwargs) + + +@dataclass +class CRDCDataElement(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["CRDCDataElement"] + class_class_curie: ClassVar[str] = "cadsr:CRDCDataElement" + class_name: ClassVar[str] = "CRDCDataElement" + class_model_uri: ClassVar[URIRef] = CADSR.CRDCDataElement + + CDE_Public_ID: Optional[str] = None + Version: Optional[str] = None + CRDC_Name: Optional[str] = None + CRD_Domain: Optional[str] = None + Example: Optional[str] = None + VD_Type: Optional[str] = None + Coding_Instruction: Optional[str] = None + Instructions: Optional[str] = None + CRDC_Definition: Optional[str] = None + CDE_Long_Name: Optional[str] = None + Registration_Status: Optional[str] = None + Workflow_Status: Optional[str] = None + Owned_By: Optional[str] = None + Used_By: Optional[str] = None + Deep_Link: Optional[str] = None + permissibleValues: Optional[Union[Union[dict, "PermissibleValue"], List[Union[dict, "PermissibleValue"]]]] = empty_list() + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.CDE_Public_ID is not None and not isinstance(self.CDE_Public_ID, str): + self.CDE_Public_ID = str(self.CDE_Public_ID) + + if self.Version is not None and not isinstance(self.Version, str): + self.Version = str(self.Version) + + if self.CRDC_Name is not None and not isinstance(self.CRDC_Name, str): + self.CRDC_Name = str(self.CRDC_Name) + + if self.CRD_Domain is not None and not isinstance(self.CRD_Domain, str): + self.CRD_Domain = str(self.CRD_Domain) + + if self.Example is not None and not isinstance(self.Example, str): + self.Example = str(self.Example) + + if self.VD_Type is not None and not isinstance(self.VD_Type, str): + self.VD_Type = str(self.VD_Type) + + if self.Coding_Instruction is not None and not isinstance(self.Coding_Instruction, str): + self.Coding_Instruction = str(self.Coding_Instruction) + + if self.Instructions is not None and not isinstance(self.Instructions, str): + self.Instructions = str(self.Instructions) + + if self.CRDC_Definition is not None and not isinstance(self.CRDC_Definition, str): + self.CRDC_Definition = str(self.CRDC_Definition) + + if self.CDE_Long_Name is not None and not isinstance(self.CDE_Long_Name, str): + self.CDE_Long_Name = str(self.CDE_Long_Name) + + if self.Registration_Status is not None and not isinstance(self.Registration_Status, str): + self.Registration_Status = str(self.Registration_Status) + + if self.Workflow_Status is not None and not isinstance(self.Workflow_Status, str): + self.Workflow_Status = str(self.Workflow_Status) + + if self.Owned_By is not None and not isinstance(self.Owned_By, str): + self.Owned_By = str(self.Owned_By) + + if self.Used_By is not None and not isinstance(self.Used_By, str): + self.Used_By = str(self.Used_By) + + if self.Deep_Link is not None and not isinstance(self.Deep_Link, str): + self.Deep_Link = str(self.Deep_Link) + + if not isinstance(self.permissibleValues, list): + self.permissibleValues = [self.permissibleValues] if self.permissibleValues is not None else [] + self.permissibleValues = [v if isinstance(v, PermissibleValue) else PermissibleValue(**as_dict(v)) for v in self.permissibleValues] + + super().__post_init__(**kwargs) + + +@dataclass +class ConceptualDomain(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["ConceptualDomain"] + class_class_curie: ClassVar[str] = "cadsr:ConceptualDomain" + class_name: ClassVar[str] = "ConceptualDomain" + class_model_uri: ClassVar[URIRef] = CADSR.ConceptualDomain + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + preferredDefinition: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + contextVersion: Optional[str] = None + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeDescription: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeDescription is not None and not isinstance(self.changeDescription, str): + self.changeDescription = str(self.changeDescription) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class ClassificationSchemeItem(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["ClassificationSchemeItem"] + class_class_curie: ClassVar[str] = "cadsr:ClassificationSchemeItem" + class_name: ClassVar[str] = "ClassificationSchemeItem" + class_model_uri: ClassVar[URIRef] = CADSR.ClassificationSchemeItem + + publicId: Optional[str] = None + version: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + super().__post_init__(**kwargs) + + +@dataclass +class DataElementqueryConceptGETResponse(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElementqueryConceptGETResponse"] + class_class_curie: ClassVar[str] = "cadsr:DataElementqueryConceptGETResponse" + class_name: ClassVar[str] = "DataElementqueryConcept_GET_response" + class_model_uri: ClassVar[URIRef] = CADSR.DataElementqueryConceptGETResponse + + numRecords: Optional[str] = None + DataElementQueryResults: Optional[Union[Union[dict, "DataElementQuery"], List[Union[dict, "DataElementQuery"]]]] = empty_list() + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.numRecords is not None and not isinstance(self.numRecords, str): + self.numRecords = str(self.numRecords) + + if not isinstance(self.DataElementQueryResults, list): + self.DataElementQueryResults = [self.DataElementQueryResults] if self.DataElementQueryResults is not None else [] + self.DataElementQueryResults = [v if isinstance(v, DataElementQuery) else DataElementQuery(**as_dict(v)) for v in self.DataElementQueryResults] + + super().__post_init__(**kwargs) + + +@dataclass +class DataElement(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElement"] + class_class_curie: ClassVar[str] = "cadsr:DataElement" + class_name: ClassVar[str] = "DataElement" + class_model_uri: ClassVar[URIRef] = CADSR.DataElement + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + preferredDefinition: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + contextVersion: Optional[str] = None + DataElementConcept: Optional[Union[dict, "DataElementConcept"]] = None + ValueDomain: Optional[Union[dict, "ValueDomain"]] = None + ClassificationSchemes: Optional[Union[Union[dict, ClassificationScheme], List[Union[dict, ClassificationScheme]]]] = empty_list() + AlternateNames: Optional[Union[Union[dict, AlternateName], List[Union[dict, AlternateName]]]] = empty_list() + ReferenceDocuments: Optional[Union[Union[dict, "ReferenceDocument"], List[Union[dict, "ReferenceDocument"]]]] = empty_list() + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeDescription: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if self.DataElementConcept is not None and not isinstance(self.DataElementConcept, DataElementConcept): + self.DataElementConcept = DataElementConcept(**as_dict(self.DataElementConcept)) + + if self.ValueDomain is not None and not isinstance(self.ValueDomain, ValueDomain): + self.ValueDomain = ValueDomain(**as_dict(self.ValueDomain)) + + if not isinstance(self.ClassificationSchemes, list): + self.ClassificationSchemes = [self.ClassificationSchemes] if self.ClassificationSchemes is not None else [] + self.ClassificationSchemes = [v if isinstance(v, ClassificationScheme) else ClassificationScheme(**as_dict(v)) for v in self.ClassificationSchemes] + + if not isinstance(self.AlternateNames, list): + self.AlternateNames = [self.AlternateNames] if self.AlternateNames is not None else [] + self.AlternateNames = [v if isinstance(v, AlternateName) else AlternateName(**as_dict(v)) for v in self.AlternateNames] + + if not isinstance(self.ReferenceDocuments, list): + self.ReferenceDocuments = [self.ReferenceDocuments] if self.ReferenceDocuments is not None else [] + self.ReferenceDocuments = [v if isinstance(v, ReferenceDocument) else ReferenceDocument(**as_dict(v)) for v in self.ReferenceDocuments] + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeDescription is not None and not isinstance(self.changeDescription, str): + self.changeDescription = str(self.changeDescription) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class ValueDomain(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["ValueDomain"] + class_class_curie: ClassVar[str] = "cadsr:ValueDomain" + class_name: ClassVar[str] = "ValueDomain" + class_model_uri: ClassVar[URIRef] = CADSR.ValueDomain + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + preferredDefinition: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + contextVersion: Optional[str] = None + type: Optional[str] = None + dataType: Optional[str] = None + unitOfMeasure: Optional[str] = None + characterSet: Optional[str] = None + minLength: Optional[str] = None + maxLength: Optional[str] = None + minValue: Optional[str] = None + maxValue: Optional[str] = None + decimalPlace: Optional[str] = None + format: Optional[str] = None + PermissibleValues: Optional[Union[Union[dict, "CDEPermissibleValue"], List[Union[dict, "CDEPermissibleValue"]]]] = empty_list() + ConceptualDomain: Optional[Union[dict, ConceptualDomain]] = None + RepresentationTerm: Optional[Union[dict, "RepresentationTerm"]] = None + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeDescription: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if self.type is not None and not isinstance(self.type, str): + self.type = str(self.type) + + if self.dataType is not None and not isinstance(self.dataType, str): + self.dataType = str(self.dataType) + + if self.unitOfMeasure is not None and not isinstance(self.unitOfMeasure, str): + self.unitOfMeasure = str(self.unitOfMeasure) + + if self.characterSet is not None and not isinstance(self.characterSet, str): + self.characterSet = str(self.characterSet) + + if self.minLength is not None and not isinstance(self.minLength, str): + self.minLength = str(self.minLength) + + if self.maxLength is not None and not isinstance(self.maxLength, str): + self.maxLength = str(self.maxLength) + + if self.minValue is not None and not isinstance(self.minValue, str): + self.minValue = str(self.minValue) + + if self.maxValue is not None and not isinstance(self.maxValue, str): + self.maxValue = str(self.maxValue) + + if self.decimalPlace is not None and not isinstance(self.decimalPlace, str): + self.decimalPlace = str(self.decimalPlace) + + if self.format is not None and not isinstance(self.format, str): + self.format = str(self.format) + + if not isinstance(self.PermissibleValues, list): + self.PermissibleValues = [self.PermissibleValues] if self.PermissibleValues is not None else [] + self.PermissibleValues = [v if isinstance(v, CDEPermissibleValue) else CDEPermissibleValue(**as_dict(v)) for v in self.PermissibleValues] + + if self.ConceptualDomain is not None and not isinstance(self.ConceptualDomain, ConceptualDomain): + self.ConceptualDomain = ConceptualDomain(**as_dict(self.ConceptualDomain)) + + if self.RepresentationTerm is not None and not isinstance(self.RepresentationTerm, RepresentationTerm): + self.RepresentationTerm = RepresentationTerm(**as_dict(self.RepresentationTerm)) + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeDescription is not None and not isinstance(self.changeDescription, str): + self.changeDescription = str(self.changeDescription) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class ObjectClass(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["ObjectClass"] + class_class_curie: ClassVar[str] = "cadsr:ObjectClass" + class_name: ClassVar[str] = "ObjectClass" + class_model_uri: ClassVar[URIRef] = CADSR.ObjectClass + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + preferredDefinition: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + contextVersion: Optional[str] = None + Concepts: Optional[Union[Union[dict, "Concept"], List[Union[dict, "Concept"]]]] = empty_list() + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeDescription: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if not isinstance(self.Concepts, list): + self.Concepts = [self.Concepts] if self.Concepts is not None else [] + self.Concepts = [v if isinstance(v, Concept) else Concept(**as_dict(v)) for v in self.Concepts] + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeDescription is not None and not isinstance(self.changeDescription, str): + self.changeDescription = str(self.changeDescription) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class DataElementqueryGETResponse(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElementqueryGETResponse"] + class_class_curie: ClassVar[str] = "cadsr:DataElementqueryGETResponse" + class_name: ClassVar[str] = "DataElementquery_GET_response" + class_model_uri: ClassVar[URIRef] = CADSR.DataElementqueryGETResponse + + numRecords: Optional[str] = None + DataElementQueryResults: Optional[Union[Union[dict, "DataElementQuery"], List[Union[dict, "DataElementQuery"]]]] = empty_list() + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.numRecords is not None and not isinstance(self.numRecords, str): + self.numRecords = str(self.numRecords) + + if not isinstance(self.DataElementQueryResults, list): + self.DataElementQueryResults = [self.DataElementQueryResults] if self.DataElementQueryResults is not None else [] + self.DataElementQueryResults = [v if isinstance(v, DataElementQuery) else DataElementQuery(**as_dict(v)) for v in self.DataElementQueryResults] + + super().__post_init__(**kwargs) + + +@dataclass +class Concept(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["Concept"] + class_class_curie: ClassVar[str] = "cadsr:Concept" + class_name: ClassVar[str] = "Concept" + class_model_uri: ClassVar[URIRef] = CADSR.Concept + + longName: Optional[str] = None + conceptCode: Optional[str] = None + definition: Optional[str] = None + evsSource: Optional[str] = None + primaryIndicator: Optional[str] = None + displayOrder: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.conceptCode is not None and not isinstance(self.conceptCode, str): + self.conceptCode = str(self.conceptCode) + + if self.definition is not None and not isinstance(self.definition, str): + self.definition = str(self.definition) + + if self.evsSource is not None and not isinstance(self.evsSource, str): + self.evsSource = str(self.evsSource) + + if self.primaryIndicator is not None and not isinstance(self.primaryIndicator, str): + self.primaryIndicator = str(self.primaryIndicator) + + if self.displayOrder is not None and not isinstance(self.displayOrder, str): + self.displayOrder = str(self.displayOrder) + + super().__post_init__(**kwargs) + + +@dataclass +class DataElementConcept(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElementConcept"] + class_class_curie: ClassVar[str] = "cadsr:DataElementConcept" + class_name: ClassVar[str] = "DataElementConcept" + class_model_uri: ClassVar[URIRef] = CADSR.DataElementConcept + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + preferredDefinition: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + contextVersion: Optional[str] = None + ObjectClass: Optional[Union[dict, ObjectClass]] = None + Property: Optional[Union[dict, Property]] = None + ConceptualDomain: Optional[Union[dict, ConceptualDomain]] = None + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeDescription: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if self.ObjectClass is not None and not isinstance(self.ObjectClass, ObjectClass): + self.ObjectClass = ObjectClass(**as_dict(self.ObjectClass)) + + if self.Property is not None and not isinstance(self.Property, Property): + self.Property = Property(**as_dict(self.Property)) + + if self.ConceptualDomain is not None and not isinstance(self.ConceptualDomain, ConceptualDomain): + self.ConceptualDomain = ConceptualDomain(**as_dict(self.ConceptualDomain)) + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeDescription is not None and not isinstance(self.changeDescription, str): + self.changeDescription = str(self.changeDescription) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class ValueMeaning(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["ValueMeaning"] + class_class_curie: ClassVar[str] = "cadsr:ValueMeaning" + class_name: ClassVar[str] = "ValueMeaning" + class_model_uri: ClassVar[URIRef] = CADSR.ValueMeaning + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + longName: Optional[str] = None + preferredDefinition: Optional[str] = None + context: Optional[str] = None + contextVersion: Optional[str] = None + Concepts: Optional[Union[Union[dict, Concept], List[Union[dict, Concept]]]] = empty_list() + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeDescription: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if not isinstance(self.Concepts, list): + self.Concepts = [self.Concepts] if self.Concepts is not None else [] + self.Concepts = [v if isinstance(v, Concept) else Concept(**as_dict(v)) for v in self.Concepts] + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeDescription is not None and not isinstance(self.changeDescription, str): + self.changeDescription = str(self.changeDescription) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class RepresentationTerm(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["RepresentationTerm"] + class_class_curie: ClassVar[str] = "cadsr:RepresentationTerm" + class_name: ClassVar[str] = "RepresentationTerm" + class_model_uri: ClassVar[URIRef] = CADSR.RepresentationTerm + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + preferredDefinition: Optional[str] = None + longName: Optional[str] = None + context: Optional[str] = None + contextVersion: Optional[str] = None + Concepts: Optional[Union[Union[dict, Concept], List[Union[dict, Concept]]]] = empty_list() + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeDescription: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if not isinstance(self.Concepts, list): + self.Concepts = [self.Concepts] if self.Concepts is not None else [] + self.Concepts = [v if isinstance(v, Concept) else Concept(**as_dict(v)) for v in self.Concepts] + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeDescription is not None and not isinstance(self.changeDescription, str): + self.changeDescription = str(self.changeDescription) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class ReferenceDocument(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["ReferenceDocument"] + class_class_curie: ClassVar[str] = "cadsr:ReferenceDocument" + class_name: ClassVar[str] = "ReferenceDocument" + class_model_uri: ClassVar[URIRef] = CADSR.ReferenceDocument + + name: Optional[str] = None + type: Optional[str] = None + description: Optional[str] = None + url: Optional[str] = None + context: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.name is not None and not isinstance(self.name, str): + self.name = str(self.name) + + if self.type is not None and not isinstance(self.type, str): + self.type = str(self.type) + + if self.description is not None and not isinstance(self.description, str): + self.description = str(self.description) + + if self.url is not None and not isinstance(self.url, str): + self.url = str(self.url) + + if self.context is not None and not isinstance(self.context, str): + self.context = str(self.context) + + super().__post_init__(**kwargs) + + +@dataclass +class CDEPermissibleValue(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["CDEPermissibleValue"] + class_class_curie: ClassVar[str] = "cadsr:CDEPermissibleValue" + class_name: ClassVar[str] = "CDEPermissibleValue" + class_model_uri: ClassVar[URIRef] = CADSR.CDEPermissibleValue + + publicId: Optional[str] = None + value: Optional[str] = None + valueDescription: Optional[str] = None + ValueMeaning: Optional[Union[dict, ValueMeaning]] = None + origin: Optional[str] = None + id: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.value is not None and not isinstance(self.value, str): + self.value = str(self.value) + + if self.valueDescription is not None and not isinstance(self.valueDescription, str): + self.valueDescription = str(self.valueDescription) + + if self.ValueMeaning is not None and not isinstance(self.ValueMeaning, ValueMeaning): + self.ValueMeaning = ValueMeaning(**as_dict(self.ValueMeaning)) + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class DataElementQuery(YAMLRoot): + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["DataElementQuery"] + class_class_curie: ClassVar[str] = "cadsr:DataElementQuery" + class_name: ClassVar[str] = "DataElementQuery" + class_model_uri: ClassVar[URIRef] = CADSR.DataElementQuery + + publicId: Optional[str] = None + version: Optional[str] = None + preferredName: Optional[str] = None + preferredDefinition: Optional[str] = None + longName: Optional[str] = None + contextName: Optional[str] = None + contextVersion: Optional[str] = None + dataElementConceptPublicId: Optional[str] = None + dataElementConceptVersion: Optional[str] = None + valueDomainPublicId: Optional[str] = None + valueDomainVersion: Optional[str] = None + origin: Optional[str] = None + workflowStatus: Optional[str] = None + registrationStatus: Optional[str] = None + id: Optional[str] = None + latestVersionIndicator: Optional[str] = None + beginDate: Optional[str] = None + endDate: Optional[str] = None + createdBy: Optional[str] = None + dateCreated: Optional[str] = None + modifiedBy: Optional[str] = None + dateModified: Optional[str] = None + changeNote: Optional[str] = None + administrativeNotes: Optional[str] = None + unresolvedIssues: Optional[str] = None + deletedIndicator: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.publicId is not None and not isinstance(self.publicId, str): + self.publicId = str(self.publicId) + + if self.version is not None and not isinstance(self.version, str): + self.version = str(self.version) + + if self.preferredName is not None and not isinstance(self.preferredName, str): + self.preferredName = str(self.preferredName) + + if self.preferredDefinition is not None and not isinstance(self.preferredDefinition, str): + self.preferredDefinition = str(self.preferredDefinition) + + if self.longName is not None and not isinstance(self.longName, str): + self.longName = str(self.longName) + + if self.contextName is not None and not isinstance(self.contextName, str): + self.contextName = str(self.contextName) + + if self.contextVersion is not None and not isinstance(self.contextVersion, str): + self.contextVersion = str(self.contextVersion) + + if self.dataElementConceptPublicId is not None and not isinstance(self.dataElementConceptPublicId, str): + self.dataElementConceptPublicId = str(self.dataElementConceptPublicId) + + if self.dataElementConceptVersion is not None and not isinstance(self.dataElementConceptVersion, str): + self.dataElementConceptVersion = str(self.dataElementConceptVersion) + + if self.valueDomainPublicId is not None and not isinstance(self.valueDomainPublicId, str): + self.valueDomainPublicId = str(self.valueDomainPublicId) + + if self.valueDomainVersion is not None and not isinstance(self.valueDomainVersion, str): + self.valueDomainVersion = str(self.valueDomainVersion) + + if self.origin is not None and not isinstance(self.origin, str): + self.origin = str(self.origin) + + if self.workflowStatus is not None and not isinstance(self.workflowStatus, str): + self.workflowStatus = str(self.workflowStatus) + + if self.registrationStatus is not None and not isinstance(self.registrationStatus, str): + self.registrationStatus = str(self.registrationStatus) + + if self.id is not None and not isinstance(self.id, str): + self.id = str(self.id) + + if self.latestVersionIndicator is not None and not isinstance(self.latestVersionIndicator, str): + self.latestVersionIndicator = str(self.latestVersionIndicator) + + if self.beginDate is not None and not isinstance(self.beginDate, str): + self.beginDate = str(self.beginDate) + + if self.endDate is not None and not isinstance(self.endDate, str): + self.endDate = str(self.endDate) + + if self.createdBy is not None and not isinstance(self.createdBy, str): + self.createdBy = str(self.createdBy) + + if self.dateCreated is not None and not isinstance(self.dateCreated, str): + self.dateCreated = str(self.dateCreated) + + if self.modifiedBy is not None and not isinstance(self.modifiedBy, str): + self.modifiedBy = str(self.modifiedBy) + + if self.dateModified is not None and not isinstance(self.dateModified, str): + self.dateModified = str(self.dateModified) + + if self.changeNote is not None and not isinstance(self.changeNote, str): + self.changeNote = str(self.changeNote) + + if self.administrativeNotes is not None and not isinstance(self.administrativeNotes, str): + self.administrativeNotes = str(self.administrativeNotes) + + if self.unresolvedIssues is not None and not isinstance(self.unresolvedIssues, str): + self.unresolvedIssues = str(self.unresolvedIssues) + + if self.deletedIndicator is not None and not isinstance(self.deletedIndicator, str): + self.deletedIndicator = str(self.deletedIndicator) + + super().__post_init__(**kwargs) + + +@dataclass +class PermissibleValue(YAMLRoot): + """ + List of Permissible Values + """ + _inherited_slots: ClassVar[List[str]] = [] + + class_class_uri: ClassVar[URIRef] = CADSR["PermissibleValue"] + class_class_curie: ClassVar[str] = "cadsr:PermissibleValue" + class_name: ClassVar[str] = "permissibleValue" + class_model_uri: ClassVar[URIRef] = CADSR.PermissibleValue + + Permissible_Value: Optional[str] = None + VM_Long_Name: Optional[str] = None + VM_Public_ID: Optional[str] = None + Concept_Code: Optional[str] = None + VM_Description: Optional[str] = None + Begin_Date: Optional[str] = None + End_Date: Optional[str] = None + + def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]): + if self.Permissible_Value is not None and not isinstance(self.Permissible_Value, str): + self.Permissible_Value = str(self.Permissible_Value) + + if self.VM_Long_Name is not None and not isinstance(self.VM_Long_Name, str): + self.VM_Long_Name = str(self.VM_Long_Name) + + if self.VM_Public_ID is not None and not isinstance(self.VM_Public_ID, str): + self.VM_Public_ID = str(self.VM_Public_ID) + + if self.Concept_Code is not None and not isinstance(self.Concept_Code, str): + self.Concept_Code = str(self.Concept_Code) + + if self.VM_Description is not None and not isinstance(self.VM_Description, str): + self.VM_Description = str(self.VM_Description) + + if self.Begin_Date is not None and not isinstance(self.Begin_Date, str): + self.Begin_Date = str(self.Begin_Date) + + if self.End_Date is not None and not isinstance(self.End_Date, str): + self.End_Date = str(self.End_Date) + + super().__post_init__(**kwargs) + + +# Enumerations + + +# Slots +class slots: + pass + +slots.publicId = Slot(uri=CADSR.publicId, name="publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.publicId, domain=None, range=Optional[str]) + +slots.version = Slot(uri=CADSR.version, name="version", curie=CADSR.curie('version'), + model_uri=CADSR.version, domain=None, range=Optional[str]) + +slots.longName = Slot(uri=CADSR.longName, name="longName", curie=CADSR.curie('longName'), + model_uri=CADSR.longName, domain=None, range=Optional[str]) + +slots.context = Slot(uri=CADSR.context, name="context", curie=CADSR.curie('context'), + model_uri=CADSR.context, domain=None, range=Optional[str]) + +slots.ClassificationSchemeItems = Slot(uri=CADSR.ClassificationSchemeItems, name="ClassificationSchemeItems", curie=CADSR.curie('ClassificationSchemeItems'), + model_uri=CADSR.ClassificationSchemeItems, domain=None, range=Optional[Union[Union[dict, ClassificationSchemeItem], List[Union[dict, ClassificationSchemeItem]]]]) + +slots.preferredName = Slot(uri=CADSR.preferredName, name="preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.preferredName, domain=None, range=Optional[str]) + +slots.preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.preferredDefinition, domain=None, range=Optional[str]) + +slots.contextVersion = Slot(uri=CADSR.contextVersion, name="contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.contextVersion, domain=None, range=Optional[str]) + +slots.Concepts = Slot(uri=CADSR.Concepts, name="Concepts", curie=CADSR.curie('Concepts'), + model_uri=CADSR.Concepts, domain=None, range=Optional[Union[Union[dict, Concept], List[Union[dict, Concept]]]]) + +slots.origin = Slot(uri=CADSR.origin, name="origin", curie=CADSR.curie('origin'), + model_uri=CADSR.origin, domain=None, range=Optional[str]) + +slots.workflowStatus = Slot(uri=CADSR.workflowStatus, name="workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.workflowStatus, domain=None, range=Optional[str]) + +slots.registrationStatus = Slot(uri=CADSR.registrationStatus, name="registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.registrationStatus, domain=None, range=Optional[str]) + +slots.id = Slot(uri=CADSR.id, name="id", curie=CADSR.curie('id'), + model_uri=CADSR.id, domain=None, range=Optional[str]) + +slots.latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.latestVersionIndicator, domain=None, range=Optional[str]) + +slots.beginDate = Slot(uri=CADSR.beginDate, name="beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.beginDate, domain=None, range=Optional[str]) + +slots.endDate = Slot(uri=CADSR.endDate, name="endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.endDate, domain=None, range=Optional[str]) + +slots.createdBy = Slot(uri=CADSR.createdBy, name="createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.createdBy, domain=None, range=Optional[str]) + +slots.dateCreated = Slot(uri=CADSR.dateCreated, name="dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.dateCreated, domain=None, range=Optional[str]) + +slots.modifiedBy = Slot(uri=CADSR.modifiedBy, name="modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.modifiedBy, domain=None, range=Optional[str]) + +slots.dateModified = Slot(uri=CADSR.dateModified, name="dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.dateModified, domain=None, range=Optional[str]) + +slots.changeDescription = Slot(uri=CADSR.changeDescription, name="changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.changeDescription, domain=None, range=Optional[str]) + +slots.administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.administrativeNotes, domain=None, range=Optional[str]) + +slots.unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.unresolvedIssues, domain=None, range=Optional[str]) + +slots.deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.deletedIndicator, domain=None, range=Optional[str]) + +slots.DataElement = Slot(uri=CADSR.DataElement, name="DataElement", curie=CADSR.curie('DataElement'), + model_uri=CADSR.DataElement, domain=None, range=Optional[Union[dict, DataElement]]) + +slots.CRDCDataElements = Slot(uri=CADSR.CRDCDataElements, name="CRDCDataElements", curie=CADSR.curie('CRDCDataElements'), + model_uri=CADSR.CRDCDataElements, domain=None, range=Optional[Union[Union[dict, CRDCDataElement], List[Union[dict, CRDCDataElement]]]]) + +slots.numRecords = Slot(uri=CADSR.numRecords, name="numRecords", curie=CADSR.curie('numRecords'), + model_uri=CADSR.numRecords, domain=None, range=Optional[str]) + +slots.DataElementQueryResults = Slot(uri=CADSR.DataElementQueryResults, name="DataElementQueryResults", curie=CADSR.curie('DataElementQueryResults'), + model_uri=CADSR.DataElementQueryResults, domain=None, range=Optional[Union[Union[dict, DataElementQuery], List[Union[dict, DataElementQuery]]]]) + +slots.name = Slot(uri=CADSR.name, name="name", curie=CADSR.curie('name'), + model_uri=CADSR.name, domain=None, range=Optional[str]) + +slots.type = Slot(uri=CADSR.type, name="type", curie=CADSR.curie('type'), + model_uri=CADSR.type, domain=None, range=Optional[str]) + +slots.CDE_Public_ID = Slot(uri=CADSR.CDE_Public_ID, name="CDE Public ID", curie=CADSR.curie('CDE_Public_ID'), + model_uri=CADSR.CDE_Public_ID, domain=None, range=Optional[str]) + +slots.Version = Slot(uri=CADSR.Version, name="Version", curie=CADSR.curie('Version'), + model_uri=CADSR.Version, domain=None, range=Optional[str]) + +slots.CRDC_Name = Slot(uri=CADSR.CRDC_Name, name="CRDC Name", curie=CADSR.curie('CRDC_Name'), + model_uri=CADSR.CRDC_Name, domain=None, range=Optional[str]) + +slots.CRD_Domain = Slot(uri=CADSR.CRD_Domain, name="CRD Domain", curie=CADSR.curie('CRD_Domain'), + model_uri=CADSR.CRD_Domain, domain=None, range=Optional[str]) + +slots.Example = Slot(uri=CADSR.Example, name="Example", curie=CADSR.curie('Example'), + model_uri=CADSR.Example, domain=None, range=Optional[str]) + +slots.VD_Type = Slot(uri=CADSR.VD_Type, name="VD Type", curie=CADSR.curie('VD_Type'), + model_uri=CADSR.VD_Type, domain=None, range=Optional[str]) + +slots.Coding_Instruction = Slot(uri=CADSR.Coding_Instruction, name="Coding Instruction", curie=CADSR.curie('Coding_Instruction'), + model_uri=CADSR.Coding_Instruction, domain=None, range=Optional[str]) + +slots.Instructions = Slot(uri=CADSR.Instructions, name="Instructions", curie=CADSR.curie('Instructions'), + model_uri=CADSR.Instructions, domain=None, range=Optional[str]) + +slots.CRDC_Definition = Slot(uri=CADSR.CRDC_Definition, name="CRDC Definition", curie=CADSR.curie('CRDC_Definition'), + model_uri=CADSR.CRDC_Definition, domain=None, range=Optional[str]) + +slots.CDE_Long_Name = Slot(uri=CADSR.CDE_Long_Name, name="CDE Long Name", curie=CADSR.curie('CDE_Long_Name'), + model_uri=CADSR.CDE_Long_Name, domain=None, range=Optional[str]) + +slots.Registration_Status = Slot(uri=CADSR.Registration_Status, name="Registration Status", curie=CADSR.curie('Registration_Status'), + model_uri=CADSR.Registration_Status, domain=None, range=Optional[str]) + +slots.Workflow_Status = Slot(uri=CADSR.Workflow_Status, name="Workflow Status", curie=CADSR.curie('Workflow_Status'), + model_uri=CADSR.Workflow_Status, domain=None, range=Optional[str]) + +slots.Owned_By = Slot(uri=CADSR.Owned_By, name="Owned By", curie=CADSR.curie('Owned_By'), + model_uri=CADSR.Owned_By, domain=None, range=Optional[str]) + +slots.Used_By = Slot(uri=CADSR.Used_By, name="Used By", curie=CADSR.curie('Used_By'), + model_uri=CADSR.Used_By, domain=None, range=Optional[str]) + +slots.Deep_Link = Slot(uri=CADSR.Deep_Link, name="Deep Link", curie=CADSR.curie('Deep_Link'), + model_uri=CADSR.Deep_Link, domain=None, range=Optional[str]) + +slots.permissibleValues = Slot(uri=CADSR.permissibleValues, name="permissibleValues", curie=CADSR.curie('permissibleValues'), + model_uri=CADSR.permissibleValues, domain=None, range=Optional[Union[Union[dict, PermissibleValue], List[Union[dict, PermissibleValue]]]]) + +slots.DataElementConcept = Slot(uri=CADSR.DataElementConcept, name="DataElementConcept", curie=CADSR.curie('DataElementConcept'), + model_uri=CADSR.DataElementConcept, domain=None, range=Optional[Union[dict, DataElementConcept]]) + +slots.ValueDomain = Slot(uri=CADSR.ValueDomain, name="ValueDomain", curie=CADSR.curie('ValueDomain'), + model_uri=CADSR.ValueDomain, domain=None, range=Optional[Union[dict, ValueDomain]]) + +slots.ClassificationSchemes = Slot(uri=CADSR.ClassificationSchemes, name="ClassificationSchemes", curie=CADSR.curie('ClassificationSchemes'), + model_uri=CADSR.ClassificationSchemes, domain=None, range=Optional[Union[Union[dict, ClassificationScheme], List[Union[dict, ClassificationScheme]]]]) + +slots.AlternateNames = Slot(uri=CADSR.AlternateNames, name="AlternateNames", curie=CADSR.curie('AlternateNames'), + model_uri=CADSR.AlternateNames, domain=None, range=Optional[Union[Union[dict, AlternateName], List[Union[dict, AlternateName]]]]) + +slots.ReferenceDocuments = Slot(uri=CADSR.ReferenceDocuments, name="ReferenceDocuments", curie=CADSR.curie('ReferenceDocuments'), + model_uri=CADSR.ReferenceDocuments, domain=None, range=Optional[Union[Union[dict, ReferenceDocument], List[Union[dict, ReferenceDocument]]]]) + +slots.dataType = Slot(uri=CADSR.dataType, name="dataType", curie=CADSR.curie('dataType'), + model_uri=CADSR.dataType, domain=None, range=Optional[str]) + +slots.unitOfMeasure = Slot(uri=CADSR.unitOfMeasure, name="unitOfMeasure", curie=CADSR.curie('unitOfMeasure'), + model_uri=CADSR.unitOfMeasure, domain=None, range=Optional[str]) + +slots.characterSet = Slot(uri=CADSR.characterSet, name="characterSet", curie=CADSR.curie('characterSet'), + model_uri=CADSR.characterSet, domain=None, range=Optional[str]) + +slots.minLength = Slot(uri=CADSR.minLength, name="minLength", curie=CADSR.curie('minLength'), + model_uri=CADSR.minLength, domain=None, range=Optional[str]) + +slots.maxLength = Slot(uri=CADSR.maxLength, name="maxLength", curie=CADSR.curie('maxLength'), + model_uri=CADSR.maxLength, domain=None, range=Optional[str]) + +slots.minValue = Slot(uri=CADSR.minValue, name="minValue", curie=CADSR.curie('minValue'), + model_uri=CADSR.minValue, domain=None, range=Optional[str]) + +slots.maxValue = Slot(uri=CADSR.maxValue, name="maxValue", curie=CADSR.curie('maxValue'), + model_uri=CADSR.maxValue, domain=None, range=Optional[str]) + +slots.decimalPlace = Slot(uri=CADSR.decimalPlace, name="decimalPlace", curie=CADSR.curie('decimalPlace'), + model_uri=CADSR.decimalPlace, domain=None, range=Optional[str]) + +slots.format = Slot(uri=CADSR.format, name="format", curie=CADSR.curie('format'), + model_uri=CADSR.format, domain=None, range=Optional[str]) + +slots.PermissibleValues = Slot(uri=CADSR.PermissibleValues, name="PermissibleValues", curie=CADSR.curie('PermissibleValues'), + model_uri=CADSR.PermissibleValues, domain=None, range=Optional[Union[Union[dict, CDEPermissibleValue], List[Union[dict, CDEPermissibleValue]]]]) + +slots.ConceptualDomain = Slot(uri=CADSR.ConceptualDomain, name="ConceptualDomain", curie=CADSR.curie('ConceptualDomain'), + model_uri=CADSR.ConceptualDomain, domain=None, range=Optional[Union[dict, ConceptualDomain]]) + +slots.RepresentationTerm = Slot(uri=CADSR.RepresentationTerm, name="RepresentationTerm", curie=CADSR.curie('RepresentationTerm'), + model_uri=CADSR.RepresentationTerm, domain=None, range=Optional[Union[dict, RepresentationTerm]]) + +slots.conceptCode = Slot(uri=CADSR.conceptCode, name="conceptCode", curie=CADSR.curie('conceptCode'), + model_uri=CADSR.conceptCode, domain=None, range=Optional[str]) + +slots.definition = Slot(uri=CADSR.definition, name="definition", curie=CADSR.curie('definition'), + model_uri=CADSR.definition, domain=None, range=Optional[str]) + +slots.evsSource = Slot(uri=CADSR.evsSource, name="evsSource", curie=CADSR.curie('evsSource'), + model_uri=CADSR.evsSource, domain=None, range=Optional[str]) + +slots.primaryIndicator = Slot(uri=CADSR.primaryIndicator, name="primaryIndicator", curie=CADSR.curie('primaryIndicator'), + model_uri=CADSR.primaryIndicator, domain=None, range=Optional[str]) + +slots.displayOrder = Slot(uri=CADSR.displayOrder, name="displayOrder", curie=CADSR.curie('displayOrder'), + model_uri=CADSR.displayOrder, domain=None, range=Optional[str]) + +slots.ObjectClass = Slot(uri=CADSR.ObjectClass, name="ObjectClass", curie=CADSR.curie('ObjectClass'), + model_uri=CADSR.ObjectClass, domain=None, range=Optional[Union[dict, ObjectClass]]) + +slots.Property = Slot(uri=CADSR.Property, name="Property", curie=CADSR.curie('Property'), + model_uri=CADSR.Property, domain=None, range=Optional[Union[dict, Property]]) + +slots.description = Slot(uri=CADSR.description, name="description", curie=CADSR.curie('description'), + model_uri=CADSR.description, domain=None, range=Optional[str]) + +slots.url = Slot(uri=CADSR.url, name="url", curie=CADSR.curie('url'), + model_uri=CADSR.url, domain=None, range=Optional[str]) + +slots.value = Slot(uri=CADSR.value, name="value", curie=CADSR.curie('value'), + model_uri=CADSR.value, domain=None, range=Optional[str]) + +slots.valueDescription = Slot(uri=CADSR.valueDescription, name="valueDescription", curie=CADSR.curie('valueDescription'), + model_uri=CADSR.valueDescription, domain=None, range=Optional[str]) + +slots.ValueMeaning = Slot(uri=CADSR.ValueMeaning, name="ValueMeaning", curie=CADSR.curie('ValueMeaning'), + model_uri=CADSR.ValueMeaning, domain=None, range=Optional[Union[dict, ValueMeaning]]) + +slots.contextName = Slot(uri=CADSR.contextName, name="contextName", curie=CADSR.curie('contextName'), + model_uri=CADSR.contextName, domain=None, range=Optional[str]) + +slots.dataElementConceptPublicId = Slot(uri=CADSR.dataElementConceptPublicId, name="dataElementConceptPublicId", curie=CADSR.curie('dataElementConceptPublicId'), + model_uri=CADSR.dataElementConceptPublicId, domain=None, range=Optional[str]) + +slots.dataElementConceptVersion = Slot(uri=CADSR.dataElementConceptVersion, name="dataElementConceptVersion", curie=CADSR.curie('dataElementConceptVersion'), + model_uri=CADSR.dataElementConceptVersion, domain=None, range=Optional[str]) + +slots.valueDomainPublicId = Slot(uri=CADSR.valueDomainPublicId, name="valueDomainPublicId", curie=CADSR.curie('valueDomainPublicId'), + model_uri=CADSR.valueDomainPublicId, domain=None, range=Optional[str]) + +slots.valueDomainVersion = Slot(uri=CADSR.valueDomainVersion, name="valueDomainVersion", curie=CADSR.curie('valueDomainVersion'), + model_uri=CADSR.valueDomainVersion, domain=None, range=Optional[str]) + +slots.changeNote = Slot(uri=CADSR.changeNote, name="changeNote", curie=CADSR.curie('changeNote'), + model_uri=CADSR.changeNote, domain=None, range=Optional[str]) + +slots.Permissible_Value = Slot(uri=CADSR.Permissible_Value, name="Permissible Value", curie=CADSR.curie('Permissible_Value'), + model_uri=CADSR.Permissible_Value, domain=None, range=Optional[str]) + +slots.VM_Long_Name = Slot(uri=CADSR.VM_Long_Name, name="VM Long Name", curie=CADSR.curie('VM_Long_Name'), + model_uri=CADSR.VM_Long_Name, domain=None, range=Optional[str]) + +slots.VM_Public_ID = Slot(uri=CADSR.VM_Public_ID, name="VM Public ID", curie=CADSR.curie('VM_Public_ID'), + model_uri=CADSR.VM_Public_ID, domain=None, range=Optional[str]) + +slots.Concept_Code = Slot(uri=CADSR.Concept_Code, name="Concept Code", curie=CADSR.curie('Concept_Code'), + model_uri=CADSR.Concept_Code, domain=None, range=Optional[str]) + +slots.VM_Description = Slot(uri=CADSR.VM_Description, name="VM Description", curie=CADSR.curie('VM_Description'), + model_uri=CADSR.VM_Description, domain=None, range=Optional[str]) + +slots.Begin_Date = Slot(uri=CADSR.Begin_Date, name="Begin Date", curie=CADSR.curie('Begin_Date'), + model_uri=CADSR.Begin_Date, domain=None, range=Optional[str]) + +slots.End_Date = Slot(uri=CADSR.End_Date, name="End Date", curie=CADSR.curie('End_Date'), + model_uri=CADSR.End_Date, domain=None, range=Optional[str]) + +slots.ClassificationScheme_publicId = Slot(uri=CADSR.publicId, name="ClassificationScheme_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.ClassificationScheme_publicId, domain=ClassificationScheme, range=Optional[str]) + +slots.ClassificationScheme_version = Slot(uri=CADSR.version, name="ClassificationScheme_version", curie=CADSR.curie('version'), + model_uri=CADSR.ClassificationScheme_version, domain=ClassificationScheme, range=Optional[str]) + +slots.ClassificationScheme_longName = Slot(uri=CADSR.longName, name="ClassificationScheme_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.ClassificationScheme_longName, domain=ClassificationScheme, range=Optional[str]) + +slots.ClassificationScheme_context = Slot(uri=CADSR.context, name="ClassificationScheme_context", curie=CADSR.curie('context'), + model_uri=CADSR.ClassificationScheme_context, domain=ClassificationScheme, range=Optional[str]) + +slots.ClassificationScheme_ClassificationSchemeItems = Slot(uri=CADSR.ClassificationSchemeItems, name="ClassificationScheme_ClassificationSchemeItems", curie=CADSR.curie('ClassificationSchemeItems'), + model_uri=CADSR.ClassificationScheme_ClassificationSchemeItems, domain=ClassificationScheme, range=Optional[Union[Union[dict, "ClassificationSchemeItem"], List[Union[dict, "ClassificationSchemeItem"]]]]) + +slots.Property_publicId = Slot(uri=CADSR.publicId, name="Property_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.Property_publicId, domain=Property, range=Optional[str]) + +slots.Property_version = Slot(uri=CADSR.version, name="Property_version", curie=CADSR.curie('version'), + model_uri=CADSR.Property_version, domain=Property, range=Optional[str]) + +slots.Property_preferredName = Slot(uri=CADSR.preferredName, name="Property_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.Property_preferredName, domain=Property, range=Optional[str]) + +slots.Property_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="Property_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.Property_preferredDefinition, domain=Property, range=Optional[str]) + +slots.Property_longName = Slot(uri=CADSR.longName, name="Property_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.Property_longName, domain=Property, range=Optional[str]) + +slots.Property_context = Slot(uri=CADSR.context, name="Property_context", curie=CADSR.curie('context'), + model_uri=CADSR.Property_context, domain=Property, range=Optional[str]) + +slots.Property_contextVersion = Slot(uri=CADSR.contextVersion, name="Property_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.Property_contextVersion, domain=Property, range=Optional[str]) + +slots.Property_Concepts = Slot(uri=CADSR.Concepts, name="Property_Concepts", curie=CADSR.curie('Concepts'), + model_uri=CADSR.Property_Concepts, domain=Property, range=Optional[Union[Union[dict, "Concept"], List[Union[dict, "Concept"]]]]) + +slots.Property_origin = Slot(uri=CADSR.origin, name="Property_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.Property_origin, domain=Property, range=Optional[str]) + +slots.Property_workflowStatus = Slot(uri=CADSR.workflowStatus, name="Property_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.Property_workflowStatus, domain=Property, range=Optional[str]) + +slots.Property_registrationStatus = Slot(uri=CADSR.registrationStatus, name="Property_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.Property_registrationStatus, domain=Property, range=Optional[str]) + +slots.Property_id = Slot(uri=CADSR.id, name="Property_id", curie=CADSR.curie('id'), + model_uri=CADSR.Property_id, domain=Property, range=Optional[str]) + +slots.Property_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="Property_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.Property_latestVersionIndicator, domain=Property, range=Optional[str]) + +slots.Property_beginDate = Slot(uri=CADSR.beginDate, name="Property_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.Property_beginDate, domain=Property, range=Optional[str]) + +slots.Property_endDate = Slot(uri=CADSR.endDate, name="Property_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.Property_endDate, domain=Property, range=Optional[str]) + +slots.Property_createdBy = Slot(uri=CADSR.createdBy, name="Property_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.Property_createdBy, domain=Property, range=Optional[str]) + +slots.Property_dateCreated = Slot(uri=CADSR.dateCreated, name="Property_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.Property_dateCreated, domain=Property, range=Optional[str]) + +slots.Property_modifiedBy = Slot(uri=CADSR.modifiedBy, name="Property_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.Property_modifiedBy, domain=Property, range=Optional[str]) + +slots.Property_dateModified = Slot(uri=CADSR.dateModified, name="Property_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.Property_dateModified, domain=Property, range=Optional[str]) + +slots.Property_changeDescription = Slot(uri=CADSR.changeDescription, name="Property_changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.Property_changeDescription, domain=Property, range=Optional[str]) + +slots.Property_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="Property_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.Property_administrativeNotes, domain=Property, range=Optional[str]) + +slots.Property_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="Property_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.Property_unresolvedIssues, domain=Property, range=Optional[str]) + +slots.Property_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="Property_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.Property_deletedIndicator, domain=Property, range=Optional[str]) + +slots.DataElementpublicId_GET_response_DataElement = Slot(uri=CADSR.DataElement, name="DataElementpublicId_GET_response_DataElement", curie=CADSR.curie('DataElement'), + model_uri=CADSR.DataElementpublicId_GET_response_DataElement, domain=DataElementpublicIdGETResponse, range=Optional[Union[dict, "DataElement"]]) + +slots.DataElementgetCRDCList_GET_response_CRDCDataElements = Slot(uri=CADSR.CRDCDataElements, name="DataElementgetCRDCList_GET_response_CRDCDataElements", curie=CADSR.curie('CRDCDataElements'), + model_uri=CADSR.DataElementgetCRDCList_GET_response_CRDCDataElements, domain=DataElementgetCRDCListGETResponse, range=Optional[Union[Union[dict, "CRDCDataElement"], List[Union[dict, "CRDCDataElement"]]]]) + +slots.DataElementqueryContext_GET_response_numRecords = Slot(uri=CADSR.numRecords, name="DataElementqueryContext_GET_response_numRecords", curie=CADSR.curie('numRecords'), + model_uri=CADSR.DataElementqueryContext_GET_response_numRecords, domain=DataElementqueryContextGETResponse, range=Optional[str]) + +slots.DataElementqueryContext_GET_response_DataElementQueryResults = Slot(uri=CADSR.DataElementQueryResults, name="DataElementqueryContext_GET_response_DataElementQueryResults", curie=CADSR.curie('DataElementQueryResults'), + model_uri=CADSR.DataElementqueryContext_GET_response_DataElementQueryResults, domain=DataElementqueryContextGETResponse, range=Optional[Union[Union[dict, "DataElementQuery"], List[Union[dict, "DataElementQuery"]]]]) + +slots.AlternateName_type = Slot(uri=CADSR.type, name="AlternateName_type", curie=CADSR.curie('type'), + model_uri=CADSR.AlternateName_type, domain=AlternateName, range=Optional[str]) + +slots.AlternateName_context = Slot(uri=CADSR.context, name="AlternateName_context", curie=CADSR.curie('context'), + model_uri=CADSR.AlternateName_context, domain=AlternateName, range=Optional[str]) + +slots.CRDCDataElement_CDE_Public_ID = Slot(uri=CADSR.CDE_Public_ID, name="CRDCDataElement_CDE Public ID", curie=CADSR.curie('CDE_Public_ID'), + model_uri=CADSR.CRDCDataElement_CDE_Public_ID, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Version = Slot(uri=CADSR.Version, name="CRDCDataElement_Version", curie=CADSR.curie('Version'), + model_uri=CADSR.CRDCDataElement_Version, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_CRDC_Name = Slot(uri=CADSR.CRDC_Name, name="CRDCDataElement_CRDC Name", curie=CADSR.curie('CRDC_Name'), + model_uri=CADSR.CRDCDataElement_CRDC_Name, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_CRD_Domain = Slot(uri=CADSR.CRD_Domain, name="CRDCDataElement_CRD Domain", curie=CADSR.curie('CRD_Domain'), + model_uri=CADSR.CRDCDataElement_CRD_Domain, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Example = Slot(uri=CADSR.Example, name="CRDCDataElement_Example", curie=CADSR.curie('Example'), + model_uri=CADSR.CRDCDataElement_Example, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_VD_Type = Slot(uri=CADSR.VD_Type, name="CRDCDataElement_VD Type", curie=CADSR.curie('VD_Type'), + model_uri=CADSR.CRDCDataElement_VD_Type, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Coding_Instruction = Slot(uri=CADSR.Coding_Instruction, name="CRDCDataElement_Coding Instruction", curie=CADSR.curie('Coding_Instruction'), + model_uri=CADSR.CRDCDataElement_Coding_Instruction, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Instructions = Slot(uri=CADSR.Instructions, name="CRDCDataElement_Instructions", curie=CADSR.curie('Instructions'), + model_uri=CADSR.CRDCDataElement_Instructions, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_CRDC_Definition = Slot(uri=CADSR.CRDC_Definition, name="CRDCDataElement_CRDC Definition", curie=CADSR.curie('CRDC_Definition'), + model_uri=CADSR.CRDCDataElement_CRDC_Definition, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_CDE_Long_Name = Slot(uri=CADSR.CDE_Long_Name, name="CRDCDataElement_CDE Long Name", curie=CADSR.curie('CDE_Long_Name'), + model_uri=CADSR.CRDCDataElement_CDE_Long_Name, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Registration_Status = Slot(uri=CADSR.Registration_Status, name="CRDCDataElement_Registration Status", curie=CADSR.curie('Registration_Status'), + model_uri=CADSR.CRDCDataElement_Registration_Status, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Workflow_Status = Slot(uri=CADSR.Workflow_Status, name="CRDCDataElement_Workflow Status", curie=CADSR.curie('Workflow_Status'), + model_uri=CADSR.CRDCDataElement_Workflow_Status, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Owned_By = Slot(uri=CADSR.Owned_By, name="CRDCDataElement_Owned By", curie=CADSR.curie('Owned_By'), + model_uri=CADSR.CRDCDataElement_Owned_By, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Used_By = Slot(uri=CADSR.Used_By, name="CRDCDataElement_Used By", curie=CADSR.curie('Used_By'), + model_uri=CADSR.CRDCDataElement_Used_By, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_Deep_Link = Slot(uri=CADSR.Deep_Link, name="CRDCDataElement_Deep Link", curie=CADSR.curie('Deep_Link'), + model_uri=CADSR.CRDCDataElement_Deep_Link, domain=CRDCDataElement, range=Optional[str]) + +slots.CRDCDataElement_permissibleValues = Slot(uri=CADSR.permissibleValues, name="CRDCDataElement_permissibleValues", curie=CADSR.curie('permissibleValues'), + model_uri=CADSR.CRDCDataElement_permissibleValues, domain=CRDCDataElement, range=Optional[Union[Union[dict, "PermissibleValue"], List[Union[dict, "PermissibleValue"]]]]) + +slots.ConceptualDomain_publicId = Slot(uri=CADSR.publicId, name="ConceptualDomain_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.ConceptualDomain_publicId, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_version = Slot(uri=CADSR.version, name="ConceptualDomain_version", curie=CADSR.curie('version'), + model_uri=CADSR.ConceptualDomain_version, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_preferredName = Slot(uri=CADSR.preferredName, name="ConceptualDomain_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.ConceptualDomain_preferredName, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="ConceptualDomain_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.ConceptualDomain_preferredDefinition, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_longName = Slot(uri=CADSR.longName, name="ConceptualDomain_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.ConceptualDomain_longName, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_context = Slot(uri=CADSR.context, name="ConceptualDomain_context", curie=CADSR.curie('context'), + model_uri=CADSR.ConceptualDomain_context, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_contextVersion = Slot(uri=CADSR.contextVersion, name="ConceptualDomain_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.ConceptualDomain_contextVersion, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_origin = Slot(uri=CADSR.origin, name="ConceptualDomain_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.ConceptualDomain_origin, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_workflowStatus = Slot(uri=CADSR.workflowStatus, name="ConceptualDomain_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.ConceptualDomain_workflowStatus, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_registrationStatus = Slot(uri=CADSR.registrationStatus, name="ConceptualDomain_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.ConceptualDomain_registrationStatus, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_id = Slot(uri=CADSR.id, name="ConceptualDomain_id", curie=CADSR.curie('id'), + model_uri=CADSR.ConceptualDomain_id, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="ConceptualDomain_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.ConceptualDomain_latestVersionIndicator, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_beginDate = Slot(uri=CADSR.beginDate, name="ConceptualDomain_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.ConceptualDomain_beginDate, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_endDate = Slot(uri=CADSR.endDate, name="ConceptualDomain_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.ConceptualDomain_endDate, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_createdBy = Slot(uri=CADSR.createdBy, name="ConceptualDomain_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.ConceptualDomain_createdBy, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_dateCreated = Slot(uri=CADSR.dateCreated, name="ConceptualDomain_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.ConceptualDomain_dateCreated, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_modifiedBy = Slot(uri=CADSR.modifiedBy, name="ConceptualDomain_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.ConceptualDomain_modifiedBy, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_dateModified = Slot(uri=CADSR.dateModified, name="ConceptualDomain_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.ConceptualDomain_dateModified, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_changeDescription = Slot(uri=CADSR.changeDescription, name="ConceptualDomain_changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.ConceptualDomain_changeDescription, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="ConceptualDomain_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.ConceptualDomain_administrativeNotes, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="ConceptualDomain_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.ConceptualDomain_unresolvedIssues, domain=ConceptualDomain, range=Optional[str]) + +slots.ConceptualDomain_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="ConceptualDomain_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.ConceptualDomain_deletedIndicator, domain=ConceptualDomain, range=Optional[str]) + +slots.ClassificationSchemeItem_publicId = Slot(uri=CADSR.publicId, name="ClassificationSchemeItem_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.ClassificationSchemeItem_publicId, domain=ClassificationSchemeItem, range=Optional[str]) + +slots.ClassificationSchemeItem_version = Slot(uri=CADSR.version, name="ClassificationSchemeItem_version", curie=CADSR.curie('version'), + model_uri=CADSR.ClassificationSchemeItem_version, domain=ClassificationSchemeItem, range=Optional[str]) + +slots.ClassificationSchemeItem_longName = Slot(uri=CADSR.longName, name="ClassificationSchemeItem_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.ClassificationSchemeItem_longName, domain=ClassificationSchemeItem, range=Optional[str]) + +slots.ClassificationSchemeItem_context = Slot(uri=CADSR.context, name="ClassificationSchemeItem_context", curie=CADSR.curie('context'), + model_uri=CADSR.ClassificationSchemeItem_context, domain=ClassificationSchemeItem, range=Optional[str]) + +slots.DataElementqueryConcept_GET_response_numRecords = Slot(uri=CADSR.numRecords, name="DataElementqueryConcept_GET_response_numRecords", curie=CADSR.curie('numRecords'), + model_uri=CADSR.DataElementqueryConcept_GET_response_numRecords, domain=DataElementqueryConceptGETResponse, range=Optional[str]) + +slots.DataElementqueryConcept_GET_response_DataElementQueryResults = Slot(uri=CADSR.DataElementQueryResults, name="DataElementqueryConcept_GET_response_DataElementQueryResults", curie=CADSR.curie('DataElementQueryResults'), + model_uri=CADSR.DataElementqueryConcept_GET_response_DataElementQueryResults, domain=DataElementqueryConceptGETResponse, range=Optional[Union[Union[dict, "DataElementQuery"], List[Union[dict, "DataElementQuery"]]]]) + +slots.DataElement_publicId = Slot(uri=CADSR.publicId, name="DataElement_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.DataElement_publicId, domain=DataElement, range=Optional[str]) + +slots.DataElement_version = Slot(uri=CADSR.version, name="DataElement_version", curie=CADSR.curie('version'), + model_uri=CADSR.DataElement_version, domain=DataElement, range=Optional[str]) + +slots.DataElement_preferredName = Slot(uri=CADSR.preferredName, name="DataElement_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.DataElement_preferredName, domain=DataElement, range=Optional[str]) + +slots.DataElement_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="DataElement_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.DataElement_preferredDefinition, domain=DataElement, range=Optional[str]) + +slots.DataElement_longName = Slot(uri=CADSR.longName, name="DataElement_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.DataElement_longName, domain=DataElement, range=Optional[str]) + +slots.DataElement_context = Slot(uri=CADSR.context, name="DataElement_context", curie=CADSR.curie('context'), + model_uri=CADSR.DataElement_context, domain=DataElement, range=Optional[str]) + +slots.DataElement_contextVersion = Slot(uri=CADSR.contextVersion, name="DataElement_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.DataElement_contextVersion, domain=DataElement, range=Optional[str]) + +slots.DataElement_DataElementConcept = Slot(uri=CADSR.DataElementConcept, name="DataElement_DataElementConcept", curie=CADSR.curie('DataElementConcept'), + model_uri=CADSR.DataElement_DataElementConcept, domain=DataElement, range=Optional[Union[dict, "DataElementConcept"]]) + +slots.DataElement_ValueDomain = Slot(uri=CADSR.ValueDomain, name="DataElement_ValueDomain", curie=CADSR.curie('ValueDomain'), + model_uri=CADSR.DataElement_ValueDomain, domain=DataElement, range=Optional[Union[dict, "ValueDomain"]]) + +slots.DataElement_ClassificationSchemes = Slot(uri=CADSR.ClassificationSchemes, name="DataElement_ClassificationSchemes", curie=CADSR.curie('ClassificationSchemes'), + model_uri=CADSR.DataElement_ClassificationSchemes, domain=DataElement, range=Optional[Union[Union[dict, ClassificationScheme], List[Union[dict, ClassificationScheme]]]]) + +slots.DataElement_AlternateNames = Slot(uri=CADSR.AlternateNames, name="DataElement_AlternateNames", curie=CADSR.curie('AlternateNames'), + model_uri=CADSR.DataElement_AlternateNames, domain=DataElement, range=Optional[Union[Union[dict, AlternateName], List[Union[dict, AlternateName]]]]) + +slots.DataElement_ReferenceDocuments = Slot(uri=CADSR.ReferenceDocuments, name="DataElement_ReferenceDocuments", curie=CADSR.curie('ReferenceDocuments'), + model_uri=CADSR.DataElement_ReferenceDocuments, domain=DataElement, range=Optional[Union[Union[dict, "ReferenceDocument"], List[Union[dict, "ReferenceDocument"]]]]) + +slots.DataElement_origin = Slot(uri=CADSR.origin, name="DataElement_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.DataElement_origin, domain=DataElement, range=Optional[str]) + +slots.DataElement_workflowStatus = Slot(uri=CADSR.workflowStatus, name="DataElement_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.DataElement_workflowStatus, domain=DataElement, range=Optional[str]) + +slots.DataElement_registrationStatus = Slot(uri=CADSR.registrationStatus, name="DataElement_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.DataElement_registrationStatus, domain=DataElement, range=Optional[str]) + +slots.DataElement_id = Slot(uri=CADSR.id, name="DataElement_id", curie=CADSR.curie('id'), + model_uri=CADSR.DataElement_id, domain=DataElement, range=Optional[str]) + +slots.DataElement_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="DataElement_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.DataElement_latestVersionIndicator, domain=DataElement, range=Optional[str]) + +slots.DataElement_beginDate = Slot(uri=CADSR.beginDate, name="DataElement_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.DataElement_beginDate, domain=DataElement, range=Optional[str]) + +slots.DataElement_endDate = Slot(uri=CADSR.endDate, name="DataElement_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.DataElement_endDate, domain=DataElement, range=Optional[str]) + +slots.DataElement_createdBy = Slot(uri=CADSR.createdBy, name="DataElement_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.DataElement_createdBy, domain=DataElement, range=Optional[str]) + +slots.DataElement_dateCreated = Slot(uri=CADSR.dateCreated, name="DataElement_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.DataElement_dateCreated, domain=DataElement, range=Optional[str]) + +slots.DataElement_modifiedBy = Slot(uri=CADSR.modifiedBy, name="DataElement_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.DataElement_modifiedBy, domain=DataElement, range=Optional[str]) + +slots.DataElement_dateModified = Slot(uri=CADSR.dateModified, name="DataElement_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.DataElement_dateModified, domain=DataElement, range=Optional[str]) + +slots.DataElement_changeDescription = Slot(uri=CADSR.changeDescription, name="DataElement_changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.DataElement_changeDescription, domain=DataElement, range=Optional[str]) + +slots.DataElement_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="DataElement_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.DataElement_administrativeNotes, domain=DataElement, range=Optional[str]) + +slots.DataElement_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="DataElement_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.DataElement_unresolvedIssues, domain=DataElement, range=Optional[str]) + +slots.DataElement_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="DataElement_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.DataElement_deletedIndicator, domain=DataElement, range=Optional[str]) + +slots.ValueDomain_publicId = Slot(uri=CADSR.publicId, name="ValueDomain_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.ValueDomain_publicId, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_version = Slot(uri=CADSR.version, name="ValueDomain_version", curie=CADSR.curie('version'), + model_uri=CADSR.ValueDomain_version, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_preferredName = Slot(uri=CADSR.preferredName, name="ValueDomain_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.ValueDomain_preferredName, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="ValueDomain_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.ValueDomain_preferredDefinition, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_longName = Slot(uri=CADSR.longName, name="ValueDomain_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.ValueDomain_longName, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_context = Slot(uri=CADSR.context, name="ValueDomain_context", curie=CADSR.curie('context'), + model_uri=CADSR.ValueDomain_context, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_contextVersion = Slot(uri=CADSR.contextVersion, name="ValueDomain_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.ValueDomain_contextVersion, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_type = Slot(uri=CADSR.type, name="ValueDomain_type", curie=CADSR.curie('type'), + model_uri=CADSR.ValueDomain_type, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_dataType = Slot(uri=CADSR.dataType, name="ValueDomain_dataType", curie=CADSR.curie('dataType'), + model_uri=CADSR.ValueDomain_dataType, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_unitOfMeasure = Slot(uri=CADSR.unitOfMeasure, name="ValueDomain_unitOfMeasure", curie=CADSR.curie('unitOfMeasure'), + model_uri=CADSR.ValueDomain_unitOfMeasure, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_characterSet = Slot(uri=CADSR.characterSet, name="ValueDomain_characterSet", curie=CADSR.curie('characterSet'), + model_uri=CADSR.ValueDomain_characterSet, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_minLength = Slot(uri=CADSR.minLength, name="ValueDomain_minLength", curie=CADSR.curie('minLength'), + model_uri=CADSR.ValueDomain_minLength, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_maxLength = Slot(uri=CADSR.maxLength, name="ValueDomain_maxLength", curie=CADSR.curie('maxLength'), + model_uri=CADSR.ValueDomain_maxLength, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_minValue = Slot(uri=CADSR.minValue, name="ValueDomain_minValue", curie=CADSR.curie('minValue'), + model_uri=CADSR.ValueDomain_minValue, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_maxValue = Slot(uri=CADSR.maxValue, name="ValueDomain_maxValue", curie=CADSR.curie('maxValue'), + model_uri=CADSR.ValueDomain_maxValue, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_decimalPlace = Slot(uri=CADSR.decimalPlace, name="ValueDomain_decimalPlace", curie=CADSR.curie('decimalPlace'), + model_uri=CADSR.ValueDomain_decimalPlace, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_format = Slot(uri=CADSR.format, name="ValueDomain_format", curie=CADSR.curie('format'), + model_uri=CADSR.ValueDomain_format, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_PermissibleValues = Slot(uri=CADSR.PermissibleValues, name="ValueDomain_PermissibleValues", curie=CADSR.curie('PermissibleValues'), + model_uri=CADSR.ValueDomain_PermissibleValues, domain=ValueDomain, range=Optional[Union[Union[dict, "CDEPermissibleValue"], List[Union[dict, "CDEPermissibleValue"]]]]) + +slots.ValueDomain_ConceptualDomain = Slot(uri=CADSR.ConceptualDomain, name="ValueDomain_ConceptualDomain", curie=CADSR.curie('ConceptualDomain'), + model_uri=CADSR.ValueDomain_ConceptualDomain, domain=ValueDomain, range=Optional[Union[dict, ConceptualDomain]]) + +slots.ValueDomain_RepresentationTerm = Slot(uri=CADSR.RepresentationTerm, name="ValueDomain_RepresentationTerm", curie=CADSR.curie('RepresentationTerm'), + model_uri=CADSR.ValueDomain_RepresentationTerm, domain=ValueDomain, range=Optional[Union[dict, "RepresentationTerm"]]) + +slots.ValueDomain_origin = Slot(uri=CADSR.origin, name="ValueDomain_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.ValueDomain_origin, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_workflowStatus = Slot(uri=CADSR.workflowStatus, name="ValueDomain_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.ValueDomain_workflowStatus, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_registrationStatus = Slot(uri=CADSR.registrationStatus, name="ValueDomain_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.ValueDomain_registrationStatus, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_id = Slot(uri=CADSR.id, name="ValueDomain_id", curie=CADSR.curie('id'), + model_uri=CADSR.ValueDomain_id, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="ValueDomain_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.ValueDomain_latestVersionIndicator, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_beginDate = Slot(uri=CADSR.beginDate, name="ValueDomain_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.ValueDomain_beginDate, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_endDate = Slot(uri=CADSR.endDate, name="ValueDomain_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.ValueDomain_endDate, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_createdBy = Slot(uri=CADSR.createdBy, name="ValueDomain_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.ValueDomain_createdBy, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_dateCreated = Slot(uri=CADSR.dateCreated, name="ValueDomain_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.ValueDomain_dateCreated, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_modifiedBy = Slot(uri=CADSR.modifiedBy, name="ValueDomain_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.ValueDomain_modifiedBy, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_dateModified = Slot(uri=CADSR.dateModified, name="ValueDomain_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.ValueDomain_dateModified, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_changeDescription = Slot(uri=CADSR.changeDescription, name="ValueDomain_changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.ValueDomain_changeDescription, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="ValueDomain_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.ValueDomain_administrativeNotes, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="ValueDomain_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.ValueDomain_unresolvedIssues, domain=ValueDomain, range=Optional[str]) + +slots.ValueDomain_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="ValueDomain_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.ValueDomain_deletedIndicator, domain=ValueDomain, range=Optional[str]) + +slots.ObjectClass_publicId = Slot(uri=CADSR.publicId, name="ObjectClass_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.ObjectClass_publicId, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_version = Slot(uri=CADSR.version, name="ObjectClass_version", curie=CADSR.curie('version'), + model_uri=CADSR.ObjectClass_version, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_preferredName = Slot(uri=CADSR.preferredName, name="ObjectClass_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.ObjectClass_preferredName, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="ObjectClass_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.ObjectClass_preferredDefinition, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_longName = Slot(uri=CADSR.longName, name="ObjectClass_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.ObjectClass_longName, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_context = Slot(uri=CADSR.context, name="ObjectClass_context", curie=CADSR.curie('context'), + model_uri=CADSR.ObjectClass_context, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_contextVersion = Slot(uri=CADSR.contextVersion, name="ObjectClass_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.ObjectClass_contextVersion, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_Concepts = Slot(uri=CADSR.Concepts, name="ObjectClass_Concepts", curie=CADSR.curie('Concepts'), + model_uri=CADSR.ObjectClass_Concepts, domain=ObjectClass, range=Optional[Union[Union[dict, "Concept"], List[Union[dict, "Concept"]]]]) + +slots.ObjectClass_origin = Slot(uri=CADSR.origin, name="ObjectClass_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.ObjectClass_origin, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_workflowStatus = Slot(uri=CADSR.workflowStatus, name="ObjectClass_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.ObjectClass_workflowStatus, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_registrationStatus = Slot(uri=CADSR.registrationStatus, name="ObjectClass_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.ObjectClass_registrationStatus, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_id = Slot(uri=CADSR.id, name="ObjectClass_id", curie=CADSR.curie('id'), + model_uri=CADSR.ObjectClass_id, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="ObjectClass_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.ObjectClass_latestVersionIndicator, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_beginDate = Slot(uri=CADSR.beginDate, name="ObjectClass_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.ObjectClass_beginDate, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_endDate = Slot(uri=CADSR.endDate, name="ObjectClass_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.ObjectClass_endDate, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_createdBy = Slot(uri=CADSR.createdBy, name="ObjectClass_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.ObjectClass_createdBy, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_dateCreated = Slot(uri=CADSR.dateCreated, name="ObjectClass_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.ObjectClass_dateCreated, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_modifiedBy = Slot(uri=CADSR.modifiedBy, name="ObjectClass_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.ObjectClass_modifiedBy, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_dateModified = Slot(uri=CADSR.dateModified, name="ObjectClass_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.ObjectClass_dateModified, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_changeDescription = Slot(uri=CADSR.changeDescription, name="ObjectClass_changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.ObjectClass_changeDescription, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="ObjectClass_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.ObjectClass_administrativeNotes, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="ObjectClass_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.ObjectClass_unresolvedIssues, domain=ObjectClass, range=Optional[str]) + +slots.ObjectClass_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="ObjectClass_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.ObjectClass_deletedIndicator, domain=ObjectClass, range=Optional[str]) + +slots.DataElementquery_GET_response_numRecords = Slot(uri=CADSR.numRecords, name="DataElementquery_GET_response_numRecords", curie=CADSR.curie('numRecords'), + model_uri=CADSR.DataElementquery_GET_response_numRecords, domain=DataElementqueryGETResponse, range=Optional[str]) + +slots.DataElementquery_GET_response_DataElementQueryResults = Slot(uri=CADSR.DataElementQueryResults, name="DataElementquery_GET_response_DataElementQueryResults", curie=CADSR.curie('DataElementQueryResults'), + model_uri=CADSR.DataElementquery_GET_response_DataElementQueryResults, domain=DataElementqueryGETResponse, range=Optional[Union[Union[dict, "DataElementQuery"], List[Union[dict, "DataElementQuery"]]]]) + +slots.Concept_longName = Slot(uri=CADSR.longName, name="Concept_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.Concept_longName, domain=Concept, range=Optional[str]) + +slots.Concept_conceptCode = Slot(uri=CADSR.conceptCode, name="Concept_conceptCode", curie=CADSR.curie('conceptCode'), + model_uri=CADSR.Concept_conceptCode, domain=Concept, range=Optional[str]) + +slots.Concept_definition = Slot(uri=CADSR.definition, name="Concept_definition", curie=CADSR.curie('definition'), + model_uri=CADSR.Concept_definition, domain=Concept, range=Optional[str]) + +slots.Concept_evsSource = Slot(uri=CADSR.evsSource, name="Concept_evsSource", curie=CADSR.curie('evsSource'), + model_uri=CADSR.Concept_evsSource, domain=Concept, range=Optional[str]) + +slots.Concept_primaryIndicator = Slot(uri=CADSR.primaryIndicator, name="Concept_primaryIndicator", curie=CADSR.curie('primaryIndicator'), + model_uri=CADSR.Concept_primaryIndicator, domain=Concept, range=Optional[str]) + +slots.Concept_displayOrder = Slot(uri=CADSR.displayOrder, name="Concept_displayOrder", curie=CADSR.curie('displayOrder'), + model_uri=CADSR.Concept_displayOrder, domain=Concept, range=Optional[str]) + +slots.DataElementConcept_publicId = Slot(uri=CADSR.publicId, name="DataElementConcept_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.DataElementConcept_publicId, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_version = Slot(uri=CADSR.version, name="DataElementConcept_version", curie=CADSR.curie('version'), + model_uri=CADSR.DataElementConcept_version, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_preferredName = Slot(uri=CADSR.preferredName, name="DataElementConcept_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.DataElementConcept_preferredName, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="DataElementConcept_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.DataElementConcept_preferredDefinition, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_longName = Slot(uri=CADSR.longName, name="DataElementConcept_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.DataElementConcept_longName, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_context = Slot(uri=CADSR.context, name="DataElementConcept_context", curie=CADSR.curie('context'), + model_uri=CADSR.DataElementConcept_context, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_contextVersion = Slot(uri=CADSR.contextVersion, name="DataElementConcept_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.DataElementConcept_contextVersion, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_ObjectClass = Slot(uri=CADSR.ObjectClass, name="DataElementConcept_ObjectClass", curie=CADSR.curie('ObjectClass'), + model_uri=CADSR.DataElementConcept_ObjectClass, domain=DataElementConcept, range=Optional[Union[dict, ObjectClass]]) + +slots.DataElementConcept_Property = Slot(uri=CADSR.Property, name="DataElementConcept_Property", curie=CADSR.curie('Property'), + model_uri=CADSR.DataElementConcept_Property, domain=DataElementConcept, range=Optional[Union[dict, Property]]) + +slots.DataElementConcept_ConceptualDomain = Slot(uri=CADSR.ConceptualDomain, name="DataElementConcept_ConceptualDomain", curie=CADSR.curie('ConceptualDomain'), + model_uri=CADSR.DataElementConcept_ConceptualDomain, domain=DataElementConcept, range=Optional[Union[dict, ConceptualDomain]]) + +slots.DataElementConcept_origin = Slot(uri=CADSR.origin, name="DataElementConcept_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.DataElementConcept_origin, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_workflowStatus = Slot(uri=CADSR.workflowStatus, name="DataElementConcept_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.DataElementConcept_workflowStatus, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_registrationStatus = Slot(uri=CADSR.registrationStatus, name="DataElementConcept_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.DataElementConcept_registrationStatus, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_id = Slot(uri=CADSR.id, name="DataElementConcept_id", curie=CADSR.curie('id'), + model_uri=CADSR.DataElementConcept_id, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="DataElementConcept_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.DataElementConcept_latestVersionIndicator, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_beginDate = Slot(uri=CADSR.beginDate, name="DataElementConcept_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.DataElementConcept_beginDate, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_endDate = Slot(uri=CADSR.endDate, name="DataElementConcept_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.DataElementConcept_endDate, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_createdBy = Slot(uri=CADSR.createdBy, name="DataElementConcept_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.DataElementConcept_createdBy, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_dateCreated = Slot(uri=CADSR.dateCreated, name="DataElementConcept_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.DataElementConcept_dateCreated, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_modifiedBy = Slot(uri=CADSR.modifiedBy, name="DataElementConcept_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.DataElementConcept_modifiedBy, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_dateModified = Slot(uri=CADSR.dateModified, name="DataElementConcept_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.DataElementConcept_dateModified, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_changeDescription = Slot(uri=CADSR.changeDescription, name="DataElementConcept_changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.DataElementConcept_changeDescription, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="DataElementConcept_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.DataElementConcept_administrativeNotes, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="DataElementConcept_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.DataElementConcept_unresolvedIssues, domain=DataElementConcept, range=Optional[str]) + +slots.DataElementConcept_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="DataElementConcept_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.DataElementConcept_deletedIndicator, domain=DataElementConcept, range=Optional[str]) + +slots.ValueMeaning_publicId = Slot(uri=CADSR.publicId, name="ValueMeaning_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.ValueMeaning_publicId, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_version = Slot(uri=CADSR.version, name="ValueMeaning_version", curie=CADSR.curie('version'), + model_uri=CADSR.ValueMeaning_version, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_preferredName = Slot(uri=CADSR.preferredName, name="ValueMeaning_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.ValueMeaning_preferredName, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_longName = Slot(uri=CADSR.longName, name="ValueMeaning_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.ValueMeaning_longName, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="ValueMeaning_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.ValueMeaning_preferredDefinition, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_context = Slot(uri=CADSR.context, name="ValueMeaning_context", curie=CADSR.curie('context'), + model_uri=CADSR.ValueMeaning_context, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_contextVersion = Slot(uri=CADSR.contextVersion, name="ValueMeaning_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.ValueMeaning_contextVersion, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_Concepts = Slot(uri=CADSR.Concepts, name="ValueMeaning_Concepts", curie=CADSR.curie('Concepts'), + model_uri=CADSR.ValueMeaning_Concepts, domain=ValueMeaning, range=Optional[Union[Union[dict, Concept], List[Union[dict, Concept]]]]) + +slots.ValueMeaning_origin = Slot(uri=CADSR.origin, name="ValueMeaning_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.ValueMeaning_origin, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_workflowStatus = Slot(uri=CADSR.workflowStatus, name="ValueMeaning_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.ValueMeaning_workflowStatus, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_registrationStatus = Slot(uri=CADSR.registrationStatus, name="ValueMeaning_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.ValueMeaning_registrationStatus, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_id = Slot(uri=CADSR.id, name="ValueMeaning_id", curie=CADSR.curie('id'), + model_uri=CADSR.ValueMeaning_id, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="ValueMeaning_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.ValueMeaning_latestVersionIndicator, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_beginDate = Slot(uri=CADSR.beginDate, name="ValueMeaning_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.ValueMeaning_beginDate, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_endDate = Slot(uri=CADSR.endDate, name="ValueMeaning_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.ValueMeaning_endDate, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_createdBy = Slot(uri=CADSR.createdBy, name="ValueMeaning_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.ValueMeaning_createdBy, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_dateCreated = Slot(uri=CADSR.dateCreated, name="ValueMeaning_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.ValueMeaning_dateCreated, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_modifiedBy = Slot(uri=CADSR.modifiedBy, name="ValueMeaning_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.ValueMeaning_modifiedBy, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_dateModified = Slot(uri=CADSR.dateModified, name="ValueMeaning_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.ValueMeaning_dateModified, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_changeDescription = Slot(uri=CADSR.changeDescription, name="ValueMeaning_changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.ValueMeaning_changeDescription, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="ValueMeaning_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.ValueMeaning_administrativeNotes, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="ValueMeaning_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.ValueMeaning_unresolvedIssues, domain=ValueMeaning, range=Optional[str]) + +slots.ValueMeaning_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="ValueMeaning_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.ValueMeaning_deletedIndicator, domain=ValueMeaning, range=Optional[str]) + +slots.RepresentationTerm_publicId = Slot(uri=CADSR.publicId, name="RepresentationTerm_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.RepresentationTerm_publicId, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_version = Slot(uri=CADSR.version, name="RepresentationTerm_version", curie=CADSR.curie('version'), + model_uri=CADSR.RepresentationTerm_version, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_preferredName = Slot(uri=CADSR.preferredName, name="RepresentationTerm_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.RepresentationTerm_preferredName, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="RepresentationTerm_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.RepresentationTerm_preferredDefinition, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_longName = Slot(uri=CADSR.longName, name="RepresentationTerm_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.RepresentationTerm_longName, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_context = Slot(uri=CADSR.context, name="RepresentationTerm_context", curie=CADSR.curie('context'), + model_uri=CADSR.RepresentationTerm_context, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_contextVersion = Slot(uri=CADSR.contextVersion, name="RepresentationTerm_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.RepresentationTerm_contextVersion, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_Concepts = Slot(uri=CADSR.Concepts, name="RepresentationTerm_Concepts", curie=CADSR.curie('Concepts'), + model_uri=CADSR.RepresentationTerm_Concepts, domain=RepresentationTerm, range=Optional[Union[Union[dict, Concept], List[Union[dict, Concept]]]]) + +slots.RepresentationTerm_origin = Slot(uri=CADSR.origin, name="RepresentationTerm_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.RepresentationTerm_origin, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_workflowStatus = Slot(uri=CADSR.workflowStatus, name="RepresentationTerm_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.RepresentationTerm_workflowStatus, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_registrationStatus = Slot(uri=CADSR.registrationStatus, name="RepresentationTerm_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.RepresentationTerm_registrationStatus, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_id = Slot(uri=CADSR.id, name="RepresentationTerm_id", curie=CADSR.curie('id'), + model_uri=CADSR.RepresentationTerm_id, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="RepresentationTerm_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.RepresentationTerm_latestVersionIndicator, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_beginDate = Slot(uri=CADSR.beginDate, name="RepresentationTerm_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.RepresentationTerm_beginDate, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_endDate = Slot(uri=CADSR.endDate, name="RepresentationTerm_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.RepresentationTerm_endDate, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_createdBy = Slot(uri=CADSR.createdBy, name="RepresentationTerm_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.RepresentationTerm_createdBy, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_dateCreated = Slot(uri=CADSR.dateCreated, name="RepresentationTerm_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.RepresentationTerm_dateCreated, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_modifiedBy = Slot(uri=CADSR.modifiedBy, name="RepresentationTerm_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.RepresentationTerm_modifiedBy, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_dateModified = Slot(uri=CADSR.dateModified, name="RepresentationTerm_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.RepresentationTerm_dateModified, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_changeDescription = Slot(uri=CADSR.changeDescription, name="RepresentationTerm_changeDescription", curie=CADSR.curie('changeDescription'), + model_uri=CADSR.RepresentationTerm_changeDescription, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="RepresentationTerm_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.RepresentationTerm_administrativeNotes, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="RepresentationTerm_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.RepresentationTerm_unresolvedIssues, domain=RepresentationTerm, range=Optional[str]) + +slots.RepresentationTerm_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="RepresentationTerm_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.RepresentationTerm_deletedIndicator, domain=RepresentationTerm, range=Optional[str]) + +slots.ReferenceDocument_type = Slot(uri=CADSR.type, name="ReferenceDocument_type", curie=CADSR.curie('type'), + model_uri=CADSR.ReferenceDocument_type, domain=ReferenceDocument, range=Optional[str]) + +slots.ReferenceDocument_description = Slot(uri=CADSR.description, name="ReferenceDocument_description", curie=CADSR.curie('description'), + model_uri=CADSR.ReferenceDocument_description, domain=ReferenceDocument, range=Optional[str]) + +slots.ReferenceDocument_url = Slot(uri=CADSR.url, name="ReferenceDocument_url", curie=CADSR.curie('url'), + model_uri=CADSR.ReferenceDocument_url, domain=ReferenceDocument, range=Optional[str]) + +slots.ReferenceDocument_context = Slot(uri=CADSR.context, name="ReferenceDocument_context", curie=CADSR.curie('context'), + model_uri=CADSR.ReferenceDocument_context, domain=ReferenceDocument, range=Optional[str]) + +slots.CDEPermissibleValue_publicId = Slot(uri=CADSR.publicId, name="CDEPermissibleValue_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.CDEPermissibleValue_publicId, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_value = Slot(uri=CADSR.value, name="CDEPermissibleValue_value", curie=CADSR.curie('value'), + model_uri=CADSR.CDEPermissibleValue_value, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_valueDescription = Slot(uri=CADSR.valueDescription, name="CDEPermissibleValue_valueDescription", curie=CADSR.curie('valueDescription'), + model_uri=CADSR.CDEPermissibleValue_valueDescription, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_ValueMeaning = Slot(uri=CADSR.ValueMeaning, name="CDEPermissibleValue_ValueMeaning", curie=CADSR.curie('ValueMeaning'), + model_uri=CADSR.CDEPermissibleValue_ValueMeaning, domain=CDEPermissibleValue, range=Optional[Union[dict, ValueMeaning]]) + +slots.CDEPermissibleValue_origin = Slot(uri=CADSR.origin, name="CDEPermissibleValue_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.CDEPermissibleValue_origin, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_id = Slot(uri=CADSR.id, name="CDEPermissibleValue_id", curie=CADSR.curie('id'), + model_uri=CADSR.CDEPermissibleValue_id, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_beginDate = Slot(uri=CADSR.beginDate, name="CDEPermissibleValue_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.CDEPermissibleValue_beginDate, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_endDate = Slot(uri=CADSR.endDate, name="CDEPermissibleValue_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.CDEPermissibleValue_endDate, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_createdBy = Slot(uri=CADSR.createdBy, name="CDEPermissibleValue_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.CDEPermissibleValue_createdBy, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_dateCreated = Slot(uri=CADSR.dateCreated, name="CDEPermissibleValue_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.CDEPermissibleValue_dateCreated, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_modifiedBy = Slot(uri=CADSR.modifiedBy, name="CDEPermissibleValue_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.CDEPermissibleValue_modifiedBy, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_dateModified = Slot(uri=CADSR.dateModified, name="CDEPermissibleValue_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.CDEPermissibleValue_dateModified, domain=CDEPermissibleValue, range=Optional[str]) + +slots.CDEPermissibleValue_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="CDEPermissibleValue_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.CDEPermissibleValue_deletedIndicator, domain=CDEPermissibleValue, range=Optional[str]) + +slots.DataElementQuery_publicId = Slot(uri=CADSR.publicId, name="DataElementQuery_publicId", curie=CADSR.curie('publicId'), + model_uri=CADSR.DataElementQuery_publicId, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_version = Slot(uri=CADSR.version, name="DataElementQuery_version", curie=CADSR.curie('version'), + model_uri=CADSR.DataElementQuery_version, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_preferredName = Slot(uri=CADSR.preferredName, name="DataElementQuery_preferredName", curie=CADSR.curie('preferredName'), + model_uri=CADSR.DataElementQuery_preferredName, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_preferredDefinition = Slot(uri=CADSR.preferredDefinition, name="DataElementQuery_preferredDefinition", curie=CADSR.curie('preferredDefinition'), + model_uri=CADSR.DataElementQuery_preferredDefinition, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_longName = Slot(uri=CADSR.longName, name="DataElementQuery_longName", curie=CADSR.curie('longName'), + model_uri=CADSR.DataElementQuery_longName, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_contextName = Slot(uri=CADSR.contextName, name="DataElementQuery_contextName", curie=CADSR.curie('contextName'), + model_uri=CADSR.DataElementQuery_contextName, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_contextVersion = Slot(uri=CADSR.contextVersion, name="DataElementQuery_contextVersion", curie=CADSR.curie('contextVersion'), + model_uri=CADSR.DataElementQuery_contextVersion, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_dataElementConceptPublicId = Slot(uri=CADSR.dataElementConceptPublicId, name="DataElementQuery_dataElementConceptPublicId", curie=CADSR.curie('dataElementConceptPublicId'), + model_uri=CADSR.DataElementQuery_dataElementConceptPublicId, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_dataElementConceptVersion = Slot(uri=CADSR.dataElementConceptVersion, name="DataElementQuery_dataElementConceptVersion", curie=CADSR.curie('dataElementConceptVersion'), + model_uri=CADSR.DataElementQuery_dataElementConceptVersion, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_valueDomainPublicId = Slot(uri=CADSR.valueDomainPublicId, name="DataElementQuery_valueDomainPublicId", curie=CADSR.curie('valueDomainPublicId'), + model_uri=CADSR.DataElementQuery_valueDomainPublicId, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_valueDomainVersion = Slot(uri=CADSR.valueDomainVersion, name="DataElementQuery_valueDomainVersion", curie=CADSR.curie('valueDomainVersion'), + model_uri=CADSR.DataElementQuery_valueDomainVersion, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_origin = Slot(uri=CADSR.origin, name="DataElementQuery_origin", curie=CADSR.curie('origin'), + model_uri=CADSR.DataElementQuery_origin, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_workflowStatus = Slot(uri=CADSR.workflowStatus, name="DataElementQuery_workflowStatus", curie=CADSR.curie('workflowStatus'), + model_uri=CADSR.DataElementQuery_workflowStatus, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_registrationStatus = Slot(uri=CADSR.registrationStatus, name="DataElementQuery_registrationStatus", curie=CADSR.curie('registrationStatus'), + model_uri=CADSR.DataElementQuery_registrationStatus, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_id = Slot(uri=CADSR.id, name="DataElementQuery_id", curie=CADSR.curie('id'), + model_uri=CADSR.DataElementQuery_id, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_latestVersionIndicator = Slot(uri=CADSR.latestVersionIndicator, name="DataElementQuery_latestVersionIndicator", curie=CADSR.curie('latestVersionIndicator'), + model_uri=CADSR.DataElementQuery_latestVersionIndicator, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_beginDate = Slot(uri=CADSR.beginDate, name="DataElementQuery_beginDate", curie=CADSR.curie('beginDate'), + model_uri=CADSR.DataElementQuery_beginDate, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_endDate = Slot(uri=CADSR.endDate, name="DataElementQuery_endDate", curie=CADSR.curie('endDate'), + model_uri=CADSR.DataElementQuery_endDate, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_createdBy = Slot(uri=CADSR.createdBy, name="DataElementQuery_createdBy", curie=CADSR.curie('createdBy'), + model_uri=CADSR.DataElementQuery_createdBy, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_dateCreated = Slot(uri=CADSR.dateCreated, name="DataElementQuery_dateCreated", curie=CADSR.curie('dateCreated'), + model_uri=CADSR.DataElementQuery_dateCreated, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_modifiedBy = Slot(uri=CADSR.modifiedBy, name="DataElementQuery_modifiedBy", curie=CADSR.curie('modifiedBy'), + model_uri=CADSR.DataElementQuery_modifiedBy, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_dateModified = Slot(uri=CADSR.dateModified, name="DataElementQuery_dateModified", curie=CADSR.curie('dateModified'), + model_uri=CADSR.DataElementQuery_dateModified, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_changeNote = Slot(uri=CADSR.changeNote, name="DataElementQuery_changeNote", curie=CADSR.curie('changeNote'), + model_uri=CADSR.DataElementQuery_changeNote, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_administrativeNotes = Slot(uri=CADSR.administrativeNotes, name="DataElementQuery_administrativeNotes", curie=CADSR.curie('administrativeNotes'), + model_uri=CADSR.DataElementQuery_administrativeNotes, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_unresolvedIssues = Slot(uri=CADSR.unresolvedIssues, name="DataElementQuery_unresolvedIssues", curie=CADSR.curie('unresolvedIssues'), + model_uri=CADSR.DataElementQuery_unresolvedIssues, domain=DataElementQuery, range=Optional[str]) + +slots.DataElementQuery_deletedIndicator = Slot(uri=CADSR.deletedIndicator, name="DataElementQuery_deletedIndicator", curie=CADSR.curie('deletedIndicator'), + model_uri=CADSR.DataElementQuery_deletedIndicator, domain=DataElementQuery, range=Optional[str]) + +slots.permissibleValue_Permissible_Value = Slot(uri=CADSR.Permissible_Value, name="permissibleValue_Permissible Value", curie=CADSR.curie('Permissible_Value'), + model_uri=CADSR.permissibleValue_Permissible_Value, domain=PermissibleValue, range=Optional[str]) + +slots.permissibleValue_VM_Long_Name = Slot(uri=CADSR.VM_Long_Name, name="permissibleValue_VM Long Name", curie=CADSR.curie('VM_Long_Name'), + model_uri=CADSR.permissibleValue_VM_Long_Name, domain=PermissibleValue, range=Optional[str]) + +slots.permissibleValue_VM_Public_ID = Slot(uri=CADSR.VM_Public_ID, name="permissibleValue_VM Public ID", curie=CADSR.curie('VM_Public_ID'), + model_uri=CADSR.permissibleValue_VM_Public_ID, domain=PermissibleValue, range=Optional[str]) + +slots.permissibleValue_Concept_Code = Slot(uri=CADSR.Concept_Code, name="permissibleValue_Concept Code", curie=CADSR.curie('Concept_Code'), + model_uri=CADSR.permissibleValue_Concept_Code, domain=PermissibleValue, range=Optional[str]) + +slots.permissibleValue_VM_Description = Slot(uri=CADSR.VM_Description, name="permissibleValue_VM Description", curie=CADSR.curie('VM_Description'), + model_uri=CADSR.permissibleValue_VM_Description, domain=PermissibleValue, range=Optional[str]) + +slots.permissibleValue_Begin_Date = Slot(uri=CADSR.Begin_Date, name="permissibleValue_Begin Date", curie=CADSR.curie('Begin_Date'), + model_uri=CADSR.permissibleValue_Begin_Date, domain=PermissibleValue, range=Optional[str]) + +slots.permissibleValue_End_Date = Slot(uri=CADSR.End_Date, name="permissibleValue_End Date", curie=CADSR.curie('End_Date'), + model_uri=CADSR.permissibleValue_End_Date, domain=PermissibleValue, range=Optional[str]) diff --git a/schema_automator/metamodels/cadsr.yaml b/schema_automator/metamodels/cadsr.yaml new file mode 100644 index 0000000..a418b67 --- /dev/null +++ b/schema_automator/metamodels/cadsr.yaml @@ -0,0 +1,1307 @@ +name: cadsr +id: https://example.org/cadsr +imports: +- linkml:types +prefixes: + cadsr: https://example.org/cadsr + linkml: https://w3id.org/linkml/ +default_prefix: cadsr +slots: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + longName: + description: A 255 character limit name for an item in the registry. + context: {} + ClassificationSchemeItems: + multivalued: true + range: ClassificationSchemeItem + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. Referred to as Short Name. + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + contextVersion: + description: The unique version identifier of the Administered Item. + Concepts: + multivalued: true + range: Concept + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of an + Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was modified + changeDescription: + description: The description of what has changed in the Administered Item since + the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the registry, + thought the physical record still exists. + DataElement: + range: DataElement + required: false + CRDCDataElements: + multivalued: true + range: CRDCDataElement + required: false + numRecords: + required: false + DataElementQueryResults: + multivalued: true + range: DataElementQuery + required: false + name: {} + type: {} + CDE Public ID: + description: The unique identifier for an Administered Item within a Registration + Authority. + Version: + description: The unique version identifier of the Administered Item. + CRDC Name: + description: CRDC Name + CRD Domain: + description: CRDC Domain + Example: + description: CRDC Example + VD Type: + description: Value Domain type + Coding Instruction: + description: CRDC Coding Instructions + Instructions: + description: CRDC Instructions + CRDC Definition: + description: CRD Definition + CDE Long Name: + description: A 255 character limit name for an item in the registry. + Registration Status: + description: A designation of the status in the registration life-cycle of an + Administered Item. + Workflow Status: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + Owned By: + description: Who owns the Data Element + Used By: + description: Who is using the Data Element + Deep Link: {} + permissibleValues: + multivalued: true + range: permissibleValue + DataElementConcept: + range: DataElementConcept + required: false + ValueDomain: + range: ValueDomain + required: false + ClassificationSchemes: + multivalued: true + range: ClassificationScheme + required: false + AlternateNames: + multivalued: true + range: AlternateName + required: false + ReferenceDocuments: + multivalued: true + range: ReferenceDocument + required: false + dataType: + required: false + unitOfMeasure: + required: false + characterSet: + required: false + minLength: + required: false + maxLength: + required: false + minValue: + required: false + maxValue: + required: false + decimalPlace: + required: false + format: + required: false + PermissibleValues: + multivalued: true + range: CDEPermissibleValue + required: false + ConceptualDomain: + range: ConceptualDomain + required: false + RepresentationTerm: + range: RepresentationTerm + required: false + conceptCode: {} + definition: {} + evsSource: + description: The name of the EVS concept code that was the source for the concept + identifier. + primaryIndicator: {} + displayOrder: {} + ObjectClass: + range: ObjectClass + required: false + Property: + range: Property + required: false + description: {} + url: {} + value: + description: A representation of a Value Meaning in a specific Value Domain the + actual Value. + required: false + valueDescription: + description: The text of the most desirable meaning for Value + required: false + ValueMeaning: + range: ValueMeaning + required: false + contextName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + dataElementConceptPublicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + dataElementConceptVersion: + description: The unique version identifier of the Administered Item. + valueDomainPublicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + valueDomainVersion: + description: The unique version identifier of the Administered Item. + changeNote: + description: The description of what has changed in the Administered Item since + the prior version of the Administered Item. + Permissible Value: + description: A representation of a Value Meaning in a specific Value Domain the + actual Value. + VM Long Name: + description: A 255 character limit name for an item in the registry. + VM Public ID: + description: The unique identifier for an Administered Item within a Registration + Authority. + Concept Code: {} + VM Description: + description: The text of the most desirable meaning for the Administered Item. + Begin Date: + description: The particular day, month and year this item became allowed. + End Date: + description: The day, month and year this item becomes no longer allowed. +classes: + DataElementContainer: + slots: + - DataElement + ClassificationScheme: + slots: + - publicId + - version + - longName + - context + - ClassificationSchemeItems + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + required: false + longName: + required: false + context: + required: false + ClassificationSchemeItems: + multivalued: true + range: ClassificationSchemeItem + Property: + slots: + - publicId + - version + - preferredName + - preferredDefinition + - longName + - context + - contextVersion + - Concepts + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeDescription + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + longName: + description: A 255 character limit name for an item in the registry. + context: + description: An associated gov.nih.nci.cadsr.domain.Context object + contextVersion: {} + Concepts: + multivalued: true + range: Concept + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeDescription: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + DataElementpublicId_GET_response: + slots: + - DataElement + slot_usage: + DataElement: + range: DataElement + required: false + DataElementgetCRDCList_GET_response: + slots: + - CRDCDataElements + slot_usage: + CRDCDataElements: + multivalued: true + range: CRDCDataElement + required: false + DataElementqueryContext_GET_response: + slots: + - numRecords + - DataElementQueryResults + slot_usage: + numRecords: + required: false + DataElementQueryResults: + multivalued: true + range: DataElementQuery + required: false + AlternateName: + slots: + - name + - type + - context + slot_usage: + type: + required: false + context: + required: false + CRDCDataElement: + slots: + - CDE Public ID + - Version + - CRDC Name + - CRD Domain + - Example + - VD Type + - Coding Instruction + - Instructions + - CRDC Definition + - CDE Long Name + - Registration Status + - Workflow Status + - Owned By + - Used By + - Deep Link + - permissibleValues + slot_usage: + CDE Public ID: + description: The unique identifier for an Administered Item within a Registration + Authority. + Version: + description: The unique version identifier of the Administered Item. + CRDC Name: + description: CRDC Name + CRD Domain: + description: CRDC Domain + Example: + description: CRDC Example + VD Type: + description: Value Domain type + Coding Instruction: + description: CRDC Coding Instructions + Instructions: + description: CRDC Instructions + CRDC Definition: + description: CRD Definition + CDE Long Name: + description: A 255 character limit name for an item in the registry. + Registration Status: + description: A designation of the status in the registration life-cycle of + an Administered Item. + Workflow Status: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + Owned By: + description: Who owns the Data Element + Used By: + description: Who is using the Data Element + Deep Link: {} + permissibleValues: + multivalued: true + range: permissibleValue + ConceptualDomain: + slots: + - publicId + - version + - preferredName + - preferredDefinition + - longName + - context + - contextVersion + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeDescription + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + longName: + description: A 255 character limit name for an item in the registry. + context: + description: An associated gov.nih.nci.cadsr.domain.Context object + contextVersion: {} + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeDescription: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + ClassificationSchemeItem: + slots: + - publicId + - version + - longName + - context + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + required: false + longName: + required: false + context: + required: false + DataElementqueryConcept_GET_response: + slots: + - numRecords + - DataElementQueryResults + slot_usage: + numRecords: + required: false + DataElementQueryResults: + multivalued: true + range: DataElementQuery + required: false + DataElement: + slots: + - publicId + - version + - preferredName + - preferredDefinition + - longName + - context + - contextVersion + - DataElementConcept + - ValueDomain + - ClassificationSchemes + - AlternateNames + - ReferenceDocuments + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeDescription + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + longName: + description: A 255 character limit name for an item in the registry. + context: + description: An associated gov.nih.nci.cadsr.domain.Context object + contextVersion: {} + DataElementConcept: + range: DataElementConcept + required: false + ValueDomain: + range: ValueDomain + required: false + ClassificationSchemes: + multivalued: true + range: ClassificationScheme + required: false + AlternateNames: + multivalued: true + range: AlternateName + required: false + ReferenceDocuments: + multivalued: true + range: ReferenceDocument + required: false + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeDescription: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + ValueDomain: + slots: + - publicId + - version + - preferredName + - preferredDefinition + - longName + - context + - contextVersion + - type + - dataType + - unitOfMeasure + - characterSet + - minLength + - maxLength + - minValue + - maxValue + - decimalPlace + - format + - PermissibleValues + - ConceptualDomain + - RepresentationTerm + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeDescription + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + required: false + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + required: false + longName: + description: A 255 character limit name for an item in the registry. + required: false + context: + description: An associated gov.nih.nci.cadsr.domain.Context object + required: false + contextVersion: + required: false + type: + required: false + dataType: + required: false + unitOfMeasure: + required: false + characterSet: + required: false + minLength: + required: false + maxLength: + required: false + minValue: + required: false + maxValue: + required: false + decimalPlace: + required: false + format: + required: false + PermissibleValues: + multivalued: true + range: CDEPermissibleValue + required: false + ConceptualDomain: + range: ConceptualDomain + required: false + RepresentationTerm: + range: RepresentationTerm + required: false + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeDescription: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + ObjectClass: + slots: + - publicId + - version + - preferredName + - preferredDefinition + - longName + - context + - contextVersion + - Concepts + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeDescription + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + longName: + description: A 255 character limit name for an item in the registry. + context: + description: An associated gov.nih.nci.cadsr.domain.Context object + contextVersion: {} + Concepts: + multivalued: true + range: Concept + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeDescription: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + DataElementquery_GET_response: + slots: + - numRecords + - DataElementQueryResults + slot_usage: + numRecords: + required: false + DataElementQueryResults: + multivalued: true + range: DataElementQuery + required: false + Concept: + slots: + - longName + - conceptCode + - definition + - evsSource + - primaryIndicator + - displayOrder + slot_usage: + longName: + description: A 255 character limit name for an item in the registry. + conceptCode: {} + definition: {} + evsSource: + description: The name of the EVS concept code that was the source for the + concept identifier. + primaryIndicator: {} + displayOrder: {} + DataElementConcept: + slots: + - publicId + - version + - preferredName + - preferredDefinition + - longName + - context + - contextVersion + - ObjectClass + - Property + - ConceptualDomain + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeDescription + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + required: false + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + required: false + longName: + description: A 255 character limit name for an item in the registry. + required: false + context: + description: An associated gov.nih.nci.cadsr.domain.Context object + required: false + contextVersion: + required: false + ObjectClass: + range: ObjectClass + required: false + Property: + range: Property + required: false + ConceptualDomain: + range: ConceptualDomain + required: false + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeDescription: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + ValueMeaning: + slots: + - publicId + - version + - preferredName + - longName + - preferredDefinition + - context + - contextVersion + - Concepts + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeDescription + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + required: false + longName: + description: A 255 character limit name for an item in the registry. + required: false + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + required: false + context: + description: An associated gov.nih.nci.cadsr.domain.Context object + required: false + contextVersion: + required: false + Concepts: + multivalued: true + range: Concept + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeDescription: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + RepresentationTerm: + slots: + - publicId + - version + - preferredName + - preferredDefinition + - longName + - context + - contextVersion + - Concepts + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeDescription + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + longName: + description: A 255 character limit name for an item in the registry. + context: + description: An associated gov.nih.nci.cadsr.domain.Context object + contextVersion: {} + Concepts: + multivalued: true + range: Concept + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeDescription: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + ReferenceDocument: + slots: + - name + - type + - description + - url + - context + slot_usage: + type: {} + description: {} + url: {} + context: {} + CDEPermissibleValue: + slots: + - publicId + - value + - valueDescription + - ValueMeaning + - origin + - id + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for a Permissible Value + required: false + value: + description: A representation of a Value Meaning in a specific Value Domain + the actual Value. + required: false + valueDescription: + description: The text of the most desirable meaning for Value + required: false + ValueMeaning: + range: ValueMeaning + required: false + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + id: + description: The 36 character caDSR database identifier. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + DataElementQuery: + slots: + - publicId + - version + - preferredName + - preferredDefinition + - longName + - contextName + - contextVersion + - dataElementConceptPublicId + - dataElementConceptVersion + - valueDomainPublicId + - valueDomainVersion + - origin + - workflowStatus + - registrationStatus + - id + - latestVersionIndicator + - beginDate + - endDate + - createdBy + - dateCreated + - modifiedBy + - dateModified + - changeNote + - administrativeNotes + - unresolvedIssues + - deletedIndicator + slot_usage: + publicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + required: false + version: + description: The unique version identifier of the Administered Item. + required: false + preferredName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. Referred to as Short Name. + preferredDefinition: + description: The text of the most desirable meaning for the Administered Item. + longName: + description: A 255 character limit name for an item in the registry. + contextName: + description: A 30 character limit name by which an Administered Item is designated + within a specific Context. + contextVersion: + description: The unique version identifier of the Administered Item. + dataElementConceptPublicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + dataElementConceptVersion: + description: The unique version identifier of the Administered Item. + valueDomainPublicId: + description: The unique identifier for an Administered Item within a Registration + Authority. + valueDomainVersion: + description: The unique version identifier of the Administered Item. + origin: + description: The source (document, project, discipline or model) for the Administered + Item. + workflowStatus: + description: A name of a designation of the status in the administrative life-cycle + of a Context Owner for handling new administered items. + registrationStatus: + description: A designation of the status in the registration life-cycle of + an Administered Item. + id: + description: The 36 character caDSR database identifier. + latestVersionIndicator: + description: The present form of an Administered Item. + beginDate: + description: The particular day, month and year this item became allowed. + endDate: + description: The day, month and year this item becomes no longer allowed. + createdBy: + description: This is a description of createdBy. + dateCreated: + description: The date the Administered Item was created. + modifiedBy: + description: Username of the person who modified the record + dateModified: + description: Date on which the record was modified; last date the object was + modified + changeNote: + description: The description of what has changed in the Administered Item + since the prior version of the Administered Item. + administrativeNotes: {} + unresolvedIssues: + description: Any problem that remains unresolved regarding proper documentation + of the Administered Item. + deletedIndicator: + description: An indicator that characterizes the item as eliminated from the + registry, thought the physical record still exists. + permissibleValue: + description: List of Permissible Values + slots: + - Permissible Value + - VM Long Name + - VM Public ID + - Concept Code + - VM Description + - Begin Date + - End Date + slot_usage: + Permissible Value: + description: A representation of a Value Meaning in a specific Value Domain + the actual Value. + VM Long Name: + description: A 255 character limit name for an item in the registry. + VM Public ID: + description: The unique identifier for an Administered Item within a Registration + Authority. + Concept Code: {} + VM Description: + description: The text of the most desirable meaning for the Administered Item. + Begin Date: + description: The particular day, month and year this item became allowed. + End Date: + description: The day, month and year this item becomes no longer allowed. + diff --git a/tests/resources/cadsr-cde-12137353.json b/tests/resources/cadsr-cde-12137353.json new file mode 100644 index 0000000..127dd66 --- /dev/null +++ b/tests/resources/cadsr-cde-12137353.json @@ -0,0 +1,4603 @@ +{ + "DataElement": { + "publicId": "12137353", + "version": "1", + "preferredName": "Imaging Technology DICOM Modality Type", + "preferredDefinition": "A system of categories for representing a specific manner, characteristic, pattern of a data acquisition device used in an imaging event whether physical or electronic.", + "longName": "12137352v1.00:2896062v2.00", + "context": "CRDC", + "contextVersion": "1", + "DataElementConcept": { + "publicId": "12137352", + "version": "1", + "preferredName": "Imaging Technology Modality", + "preferredDefinition": "Any of a number of technologies that permits the visualization and acquisition of images into a physical or electronic record.:A specific manner, characteristic, pattern of application or the employment of, any therapeutic agent or method of treatment, especially involving the physical treatment of a condition.", + "longName": "12137351v1.00:2430878v1.00", + "context": "NCIP", + "contextVersion": "1", + "ObjectClass": { + "publicId": "12137351", + "version": "1", + "preferredName": "Imaging Technology", + "preferredDefinition": "Any of a number of technologies that permits the visualization and acquisition of images into a physical or electronic record.", + "longName": "C18843", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Imaging Technology", + "conceptCode": "C18843", + "definition": "Any of a number of technologies that permits the visualization and acquisition of images into a physical or electronic record.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "EFB98235-243C-22F3-E053-731AD00AC1E7", + "latestVersionIndicator": "Yes", + "beginDate": "2022-12-13", + "endDate": null, + "createdBy": "JKNABLE", + "dateCreated": "2022-12-13", + "modifiedBy": "JKNABLE", + "dateModified": "2022-12-13", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "Property": { + "publicId": "2430878", + "version": "1", + "preferredName": "Modality", + "preferredDefinition": "A specific manner, characteristic, pattern of application or the employment of, any therapeutic agent or method of treatment, especially involving the physical treatment of a condition.", + "longName": "C41147", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Modality", + "conceptCode": "C41147", + "definition": "A specific manner, characteristic, pattern of application or the employment of, any therapeutic agent or method of treatment, especially involving the physical treatment of a condition.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": "NCI Thesaurus", + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "05D87511-7D85-1EF7-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2005-11-18", + "endDate": null, + "createdBy": "REEVESD", + "dateCreated": "2005-11-18", + "modifiedBy": "ONEDATA", + "dateModified": "2005-11-18", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "ConceptualDomain": { + "publicId": "2233241", + "version": "1", + "preferredName": "Medical Imaging", + "preferredDefinition": "Events, people, materials and activities uniquely defined by medical imaging. ", + "longName": "MEDICAL IMAGING", + "context": "CIP", + "contextVersion": "2.31", + "origin": "DICOM:Digital Imaging and Communications in Medicine", + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "F96173D7-A9B4-3CBB-E034-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2005-06-12", + "endDate": null, + "createdBy": "REEVESD", + "dateCreated": "2005-06-12", + "modifiedBy": "SBREXT", + "dateModified": "2006-09-13", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": "DICOM:Digital Imaging and Communications in Medicine", + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "EFB98235-243D-22F3-E053-731AD00AC1E7", + "latestVersionIndicator": "Yes", + "beginDate": "2022-12-13", + "endDate": null, + "createdBy": "JKNABLE", + "dateCreated": "2022-12-13", + "modifiedBy": "JKNABLE", + "dateModified": "2023-02-06", + "changeDescription": "4/30/09 created per VCDE Equipment CDE set small group to include \"image\" as a qualifier in the OC.", + "administrativeNotes": "2/6/23 released per Smita/DSS. jk", + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "ValueDomain": { + "publicId": "2896062", + "version": "2", + "preferredName": "DICOM Modality Type", + "preferredDefinition": "The kind of imaging equipment used to complete an imaging event whether physical or electronic. [Manually-curated]_A comprehensive set of standards for communications between medical imaging devices, including handling, storing and transmitting information in medical imaging. It includes a file format definition and a network communication protocol._A specific manner, characteristic, pattern of application or the employment of, any therapeutic agent or method of treatment, especially involving the physical treatment of a condition.", + "longName": "DICOM_MODALITY_TP", + "context": "NCIP", + "contextVersion": "1", + "type": "Enumerated", + "dataType": "CHARACTER", + "minLength": null, + "maxLength": "16", + "minValue": null, + "maxValue": null, + "decimalPlace": null, + "PermissibleValues": [ + { + "value": "OP", + "valueDescription": "Ophthalmic Photography", + "ValueMeaning": { + "publicId": "2582151", + "version": "1", + "preferredName": "Ophthalmic Photography", + "longName": "2582151v1.00", + "preferredDefinition": "Photography used to study and document structures and disorders of the eye.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Ophthalmic Photography", + "conceptCode": "C190559", + "definition": "Photography used to study and document structures and disorders of the eye.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "2509CE88-0DF4-5C23-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2006-11-22", + "endDate": null, + "createdBy": "CHILLIJ", + "dateCreated": "2006-11-22", + "modifiedBy": "COLBERTM", + "dateModified": "2022-12-19", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": "DICOM:Digital Imaging and Communications in Medicine", + "id": "ED7178B3-F759-7BE1-E053-731AD00AE54F", + "beginDate": "2006-11-22", + "endDate": null, + "createdBy": "CHILLIJ", + "dateCreated": "2022-11-14", + "modifiedBy": "ONEDATA", + "dateModified": "2022-11-14", + "deletedIndicator": "No" + }, + { + "value": "OT", + "valueDescription": "Other", + "ValueMeaning": { + "publicId": "2559653", + "version": "1", + "preferredName": "Other", + "longName": "2559653", + "preferredDefinition": "Different than the one(s) previously specified or mentioned.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Other", + "conceptCode": "C17649", + "definition": "Different than the one(s) previously specified or mentioned.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "2509CE87-B612-5C23-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2002-02-13", + "endDate": null, + "createdBy": "SBR", + "dateCreated": "2002-02-13", + "modifiedBy": "GDEEN", + "dateModified": "2023-12-28", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": "DICOM:Digital Imaging and Communications in Medicine", + "id": "ED7178B3-F75A-7BE1-E053-731AD00AE54F", + "beginDate": "2006-11-22", + "endDate": null, + "createdBy": "CHILLIJ", + "dateCreated": "2022-11-14", + "modifiedBy": "ONEDATA", + "dateModified": "2022-11-14", + "deletedIndicator": "No" + }, + { + "value": "PR", + "valueDescription": "Presentation State", + "ValueMeaning": { + "publicId": "2582144", + "version": "1", + "preferredName": "Presentation State", + "longName": "2582144v1.00", + "preferredDefinition": "An independent DICOM SOP Instance that contains information on how a particular image should be displayed. The Presentation State may contain label information (types of Label and Positions), windowing values, zoom value, scrolling (panning) values, rotations or any other visual display element that is defined within the DICOM standard.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "DICOM Presentation State", + "conceptCode": "C190587", + "definition": "An independent DICOM SOP Instance that contains information on how a particular image should be displayed. The Presentation State may contain label information (types of Label and Positions), windowing values, zoom value, scrolling (panning) values, rotations or any other visual display element that is defined within the DICOM standard.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "2509CE88-0DED-5C23-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2006-11-22", + "endDate": null, + "createdBy": "CHILLIJ", + "dateCreated": "2006-11-22", + "modifiedBy": "COLBERTM", + "dateModified": "2022-12-19", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": "DICOM:Digital Imaging and Communications in Medicine", + "id": "ED7178B3-F75B-7BE1-E053-731AD00AE54F", + "beginDate": "2006-11-22", + "endDate": null, + "createdBy": "CHILLIJ", + "dateCreated": "2022-11-14", + "modifiedBy": "ONEDATA", + "dateModified": "2022-11-14", + "deletedIndicator": "No" + }, + { + "value": "PT", + "valueDescription": "PET scan", + "ValueMeaning": { + "publicId": "2581621", + "version": "1", + "preferredName": "PET scan", + "longName": "2581621", + "preferredDefinition": "A technique for measuring the gamma radiation produced by collisions of electrons and positrons (anti-electrons) within living tissue. In positron emission tomography (PET), a subject is given a dose of a positron-emitting radionuclide attached to a metabolically active substance (for example, 2-fluoro-2-deoxy-D-glucose (FDG), which is similar to a naturally occurring sugar, glucose, with the addition of a radioactive fluorine atom). When living tissue containing the positron emitter is bombarded by electrons, gamma radiation produced by collisions of electrons and positrons is detected by a scanner, revealing in fine detail the tissue location of the metabolically-active substance administered.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Positron Emission Tomography", + "conceptCode": "C17007", + "definition": "A technique for measuring the gamma radiation produced by collisions of electrons and positrons (anti-electrons) within living tissue. In positron emission tomography (PET), a subject is given a dose of a positron-emitting radionuclide attached to a metabolically active substance (for example, 2-fluoro-2-deoxy-D-glucose (FDG), which is similar to a naturally occurring sugar, glucose, with the addition of a radioactive fluorine atom). When living tissue containing the positron emitter is bombarded by electrons, gamma radiation produced by collisions of electrons and positrons is detected by a scanner, revealing in fine detail the tissue location of the metabolically-active substance administered.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "2509CE88-0BE2-5C23-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2004-08-19", + "endDate": null, + "createdBy": "REEVESD", + "dateCreated": "2004-08-19", + "modifiedBy": "COLBERTM", + "dateModified": "2022-12-21", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": "DICOM:Digital Imaging and Communications in Medicine", + "id": "ED7178B3-F75C-7BE1-E053-731AD00AE54F", + "beginDate": "2006-11-22", + "endDate": null, + "createdBy": 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It includes a file format definition and a network communication protocol.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "No", + "displayOrder": "2" + }, + { + "longName": "Modality", + "conceptCode": "C41147", + "definition": "A specific manner, characteristic, pattern of application or the employment of, any therapeutic agent or method of treatment, especially involving the physical treatment of a condition.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "No", + "displayOrder": "1" + }, + { + "longName": "Type", + "conceptCode": "C25284", + "definition": "Something distinguishable as an identifiable class based on common qualities.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "ED719FD6-9059-0167-E053-731AD00A6C57", + "latestVersionIndicator": "Yes", + "beginDate": "2022-11-14", + "endDate": null, + "createdBy": "COLBERTM", + "dateCreated": "2022-11-14", + "modifiedBy": "COLBERTM", + "dateModified": "2022-11-14", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": "DICOM:Digital Imaging and Communications in Medicine", + "workflowStatus": "RELEASED", + "registrationStatus": "Standard", + "id": "ED7178BA-DE34-7BC9-E053-731AD00A09CF", + "latestVersionIndicator": "Yes", + "beginDate": "2009-06-01", + "endDate": "2022-11-14", + "createdBy": "COLBERTM", + "dateCreated": "2022-11-14", + "modifiedBy": "JKNABLE", + "dateModified": "2023-02-06", + "changeDescription": "10/6/10 released as part of content cleanup; definitions for VM still under review by IVI SMEs. 6/10/09 change status to draft mod as IVI SMEs provide definitions for value meanings. 6/1/09 new VD to change rep term from code to type per VCDE small group recommendation; kept as draft new during review to allow updates to modality type definitions. 10/9/08 - released post NCIA Interim Rpt Changes - enumerated values still need defintions from IVI WS SMEs. 9/17/07 VD versioned to support DICOM task utilizing IE & DICOM Attribute terms. Needed for NCIA model load.", + "administrativeNotes": "2/6/23 released/standard per Smita/DSS. jk; 11/14/22 Revised to major version 2.0 instead of minor 1.1 due to semantic change for qualifier terms. mr; \r\n11/3/22 Created v1.1 for CRDC CDS to update VM concepts. mr", + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "ClassificationSchemes": [ + { + "publicId": "10466051", + "version": "1", + "longName": "All CRDC Standard Data Elements", + "context": "CRDC", + "ClassificationSchemeItems": [ + { + "publicId": "14216931", + "version": "1", + "longName": "Imaging", + "context": "CRDC" + } + ] + }, + { + "publicId": "11518160", + "version": "1", + "longName": "CTDC (Clinical Trial Data Commons)", + "context": "CRDC", + "ClassificationSchemeItems": [ + { + "publicId": "14413707", + "version": "1", + "longName": "CTDC Model", + "context": "CRDC" + }, + { + "publicId": "14413709", + "version": "1", + "longName": "Study", + "context": "CRDC" + } + ] + }, + { + "publicId": "12173174", + "version": "1", + "longName": "PCDC Aggregated Dictionary", + "context": "Pediatric Cancer", + "ClassificationSchemeItems": [ + { + "publicId": "12173177", + "version": "1", + "longName": "Testing", + "context": "Pediatric Cancer" + }, + { + "publicId": "12173193", + "version": "1", + "longName": "Imaging", + "context": "Pediatric Cancer" + } + ] + }, + { + "publicId": "13574489", + "version": "1", + "longName": "Childhood Cancer Data Initiative", + "context": "Pediatric Cancer", + "ClassificationSchemeItems": [ + { + "publicId": "13594093", + "version": "1", + "longName": "Sample", + "context": "Pediatric Cancer" + }, + { + "publicId": "13596238", + "version": "1", + "longName": "Radiology File", + "context": "Pediatric Cancer" + } + ] + }, + { + "publicId": "13954630", + "version": "1", + "longName": "All Pediatric Core CDEs", + "context": "Pediatric Cancer", + "ClassificationSchemeItems": [ + { + "publicId": "14599260", + "version": "1", + "longName": "Imaging", + "context": "Pediatric Cancer" + } + ] + }, + { + "publicId": "8064110", + "version": "1", + "longName": "CDS (Cancer Data Service)", + "context": "CRDC", + "ClassificationSchemeItems": [ + { + "publicId": "14470388", + "version": "1", + "longName": "Imaging", + "context": "CRDC" + } + ] + } + ], + "AlternateNames": [ + { + "name": "(0008,0060)", + "type": "DICOM_TAG", + "context": "NCIP" + }, + { + "name": "Modality", + "type": "DICOM Attribute Name", + "context": "NCIP" + }, + { + "name": "DICOM Modality Type", + "type": "CRDC Alt Name", + "context": "CRDC" + }, + { + "name": "IMAGING_METHOD", + "type": "PCDC Alt Name", + "context": "Pediatric Cancer" + }, + { + "name": "image_modality", + "type": "CCDI Alt Name", + "context": "Pediatric Cancer" + }, + { + "name": "performed_imaging_study_nonAcquisitionModalitiesInStudyCode", + "type": "CDS Alt Name", + "context": "CRDC" + }, + { + "name": "Imaging Modality", + "type": "Ped Cancer Alt Name", + "context": "Pediatric Cancer" + }, + { + "name": "image_type_included", + "type": "CTDC Alt Name", + "context": "CRDC" + }, + { + "name": "image_modality", + "type": "CDS Alt Name", + "context": "CRDC" + } + ], + "ReferenceDocuments": [ + { + "name": "PQT", + "type": "Preferred Question Text", + "description": "Imaging Modality", + "url": null, + "context": "NCIP" + }, + { + "name": "DICOM CID 32", + "type": "REFERENCE", + "description": "DICOM CID 32 Non-Acquisition Modalities", + "url": "https://dicom.nema.org/medical/dicom/current/output/chtml/part16/sect_CID_32.html", + "context": "NCIP" + }, + { + "name": "DICOM CID 29", + "type": "REFERENCE", + "description": "DICOM CID 29 Acquisition Modalities", + "url": "https://dicom.nema.org/medical/dicom/current/output/chtml/part16/sect_CID_29.html", + "context": "NCIP" + }, + { + "name": "CRDC Instruction", + "type": "Coding Instructions", + "description": "Retired PVs are provided for historical data sets and should not be used in new data collections.", + "url": null, + "context": "CRDC" + }, + { + "name": "DICOM CID 32", + "type": "COMMENT", + "description": "DICOM CID 32 Non-Acquisition Modalities: Codes that may be used to identify the type of equipment, or function or technique of that equipment, that created the data used to create an instance, other than by means of acquisition through interaction with a patient or specimen.", + "url": null, + "context": "NCIP" + }, + { + "name": "DICOM CID 29", + "type": "COMMENT", + "description": "DICOM CID 29 Acquisition Modalities: Codes that may be used to identify the type of diagnostic equipment, or function or technique of that equipment, that originally acquired, through interaction with a patient or specimen, the data used to create the instance.", + "url": null, + "context": "NCIP" + }, + { + "name": "CCDI Example", + "type": "EXAMPLE", + "description": "CT, MRI, PET", + "url": null, + "context": "Pediatric Cancer" + }, + { + "name": "Ped Core", + "type": "EXAMPLE", + "description": "CT, MRI, PET", + "url": null, + "context": "Pediatric Cancer" + }, + { + "name": "CTDC Coding Instructions", + "type": "Coding Instructions", + "description": "Displayed as: Image Types", + "url": null, + "context": "CRDC" + } + ], + "origin": "DICOM:Digital Imaging and Communications in Medicine", + "workflowStatus": "RELEASED", + "registrationStatus": "Standard", + "id": "EFB994FC-5694-259E-E053-731AD00A7203", + "latestVersionIndicator": "Yes", + "beginDate": "2022-12-13", + "endDate": null, + "createdBy": "JKNABLE", + "dateCreated": "2022-12-13", + "modifiedBy": "FINCHAMB", + "dateModified": "2024-02-05", + "changeDescription": "9/28/09 - typo in definition. 9/3/09 per VCDE direction, CDE given \"Standard\" status and moved to Data Standards folder. 8/5/09 updated short name. 6/18/09 added DICOM alt defs and names. 6/10/09 released with \"draft mod\" VD to allow update of value meaning descriptions by IVI SMEs during caBIG review. 6/1/09 created new CDE - new VD to change rep term from code to type per VCDE small group recommendation. VD kept draft new to permit addition of value definition by IVI workspace. 4/30/09 created to add \"image\" as an OC qualifier as part of the VCDE small group recommedation for the Equipment CDE set.", + "administrativeNotes": "2/5/24 Added CDS Alt name and def. BF;1/1/24 Added CDS alt Def to match CDS imaging XLS. jk; 12/26/23 Added CCDI Example reference document. jk; 7/20/23 Added PCDC alt def. mr; 4/6/23 Added PCDC parent CSI. mr; 2/6/23 released/standard per Smita/DSS. jk 12/13/22 Created for CRDC DSS data element; VD versioned to support current DICOM Acquisition and Non-Acquisition Modalities permissible values set; retired via end date values included for older data sets but not in current DICOM PV sets. jk", + "unresolvedIssues": null, + "deletedIndicator": "No" + } +} diff --git a/tests/resources/cadsr-cde-217609.json b/tests/resources/cadsr-cde-217609.json new file mode 100644 index 0000000..e69de29 diff --git a/tests/resources/cadsr-cde-2179609.json b/tests/resources/cadsr-cde-2179609.json new file mode 100644 index 0000000..4141282 --- /dev/null +++ b/tests/resources/cadsr-cde-2179609.json @@ -0,0 +1,1300 @@ +{ + "DataElement": { + "publicId": "2179609", + "version": "4", + "preferredName": "Adverse Event Attribution Code", + "preferredDefinition": "The code that indicates whether the adverse event is related to the agent or device.", + "longName": "AE_ATTR_CD", + "context": "DCP", + "contextVersion": "1", + "DataElementConcept": { + "publicId": "2014018", + "version": "1", + "preferredName": "Adverse Event Attribution", + "preferredDefinition": "the causal relationship between the treatment modality and the specific adverse event.", + "longName": "AE_ATTR", + "context": "CTEP", + "contextVersion": "2.31", + "ObjectClass": { + "publicId": "2184272", + "version": "1", + "preferredName": "Adverse Event", + "preferredDefinition": "An unwanted effect caused by a drug or therapy. Such effects can be drug related, dose related, route related, patient related, caused by an interaction with another drug, or caused by opioid initiation or dose escalation.", + "longName": "Adverse Event", + "context": "CTEP", + "contextVersion": "2.31", + "Concepts": [ + { + "longName": "Adverse Event", + "conceptCode": "C41331", + "definition": "Any unfavorable or unintended disease, sign, or symptom (including an abnormal laboratory finding) that is temporally associated with the use of a medical treatment or procedure, and that may or may not be considered related to the medical treatment or procedure. Such events can be related to the intervention, dose, route of administration, patient, or caused by an interaction with another drug(s) or procedure(s).", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": "NCI Thesaurus", + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "DB6C8AC6-194E-3E75-E034-0003BA12F5E7", + "latestVersionIndicator": "Yes", + "beginDate": "2004-05-27", + "endDate": null, + "createdBy": "SBREXT", + "dateCreated": "2004-05-27", + "modifiedBy": "SBR", + "dateModified": "2005-04-06", + "changeDescription": "Change concept code to C41331 as C2861 is retired per EVS. dw", + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "Property": { + "publicId": "2177640", + "version": "1", + "preferredName": "Attribution", + "preferredDefinition": "Attribution; assigning to a cause or source.", + "longName": "Attribution", + "context": "CTEP", + 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+ "ValueMeaning": { + "publicId": "2567630", + "version": "1", + "preferredName": "Unlikely", + "longName": "2567630", + "preferredDefinition": "A characteristic used to qualify the adverse event as unlikely related to the medical intervention. 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According to WHO causality assessment criteria of suspected adverse reactions it is applicable to a clinical event, including laboratory test abnormality, with a reasonable time sequence to administration of the drug, but which could also be explained by concurrent disease or other drugs or chemicals. Information on drug withdrawal may be lacking or unclear.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Adverse Event Possibly Related to Intervention", + "conceptCode": "C53258", + "definition": "A characteristic indicating that an adverse event may be related to the medical intervention. According to WHO causality assessment criteria of suspected adverse reactions it is applicable to a clinical event, including laboratory test abnormality, with a reasonable time sequence to administration of the drug, but which could also be explained by concurrent disease or other drugs or chemicals. 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According to WHO causality assessment criteria of suspected adverse reactions it is applicable to a clinical event, including laboratory test abnormality, with a reasonable time sequence to the medical intervention, unlikely to be attributed to concurrent disease or other medical interventions, and which follows a clinically reasonable response on withdrawal (dechallenge). Rechallenge information is not required to fulfill this definition.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Adverse Event Probably Related to Intervention", + "conceptCode": "C53259", + "definition": "A characteristic used to qualify the adverse event as likely related to the medical intervention. According to WHO causality assessment criteria of suspected adverse reactions it is applicable to a clinical event, including laboratory test abnormality, with a reasonable time sequence to the medical intervention, unlikely to be attributed to concurrent disease or other medical interventions, and which follows a clinically reasonable response on withdrawal (dechallenge). Rechallenge information is not required to fulfill this definition.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "2509CE87-D53D-5C23-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2003-12-31", + "endDate": null, + "createdBy": "SBREXT", + "dateCreated": "2003-12-31", + "modifiedBy": "HARTLEYG", + "dateModified": "2016-12-14", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "43A6AC55-8A73-35F2-E053-F662850A6D23", + "beginDate": "2002-09-09", + "endDate": null, + "createdBy": "HARTLEYG", + "dateCreated": "2016-12-14", + "modifiedBy": "ONEDATA", + "dateModified": "2016-12-14", + "deletedIndicator": "No" + }, + { + "value": "5", + "valueDescription": "Definite", + "ValueMeaning": { + "publicId": "2567633", + "version": "1", + "preferredName": "Definite", + "longName": "2567633", + "preferredDefinition": "A characteristic used to qualify the adverse event as certainly related to the medical intervention. According to WHO causality assessment criteria of suspected adverse reactions it is applicable to a clinical event, including laboratory test abnormality, occurring in a plausible time relationship to medical intervention, and which cannot be explained by concurrent disease or other interventions. The response to withdrawal of the medical product (dechallenge) should be clinically plausible. The event must be definitive pharmacologically or phenomenologically, using a satisfactory rechallenge procedure if necessary.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Adverse Event Definitely Related to Intervention", + "conceptCode": "C53260", + "definition": "A characteristic used to qualify the adverse event as certainly related to the medical intervention. According to WHO causality assessment criteria of suspected adverse reactions it is applicable to a clinical event, including laboratory test abnormality, occurring in a plausible time relationship to medical intervention, and which cannot be explained by concurrent disease or other interventions. The response to withdrawal of the medical product (dechallenge) should be clinically plausible. 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Cytarabine is converted to the triphosphate form within the cell and then competes with cytidine for incorporation into DNA. Because the arabinose sugar sterically hinders the rotation of the molecule within DNA, DNA replication ceases, specifically during the S phase of the cell cycle. This agent also inhibits DNA polymerase, resulting in a decrease in DNA replication and repair. (NCI04)", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "443FAAF5-4136-370B-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": null, + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": "2008-01-21", + "modifiedBy": "SBR", + "dateModified": "2018-01-19", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "443FAAF5-414F-370B-E044-0003BA3F9857", + "beginDate": "2008-01-21", + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": "2008-01-21", + "modifiedBy": "ALAIS", + "dateModified": "2008-01-21", + "deletedIndicator": "No" + }, + { + "value": "Daunorubicin", + "valueDescription": "Daunorubicin", + "ValueMeaning": { + "publicId": "2724326", + "version": "1", + "preferredName": "Daunorubicin", + "longName": "2724326", + "preferredDefinition": "An anthracycline antineoplastic antibiotic with therapeutic effects similar to those of doxorubicin. Daunorubicin exhibits cytotoxic activity through topoisomerase-mediated interaction with DNA, thereby inhibiting DNA replication and repair and RNA and protein synthesis.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Daunorubicin", + "conceptCode": "C62091", + "definition": "An anthracycline antineoplastic antibiotic with therapeutic effects similar to those of doxorubicin. Daunorubicin exhibits cytotoxic activity through topoisomerase-mediated interaction with DNA, thereby inhibiting DNA replication and repair and RNA and protein synthesis.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "443FAAF5-415D-370B-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": null, + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": "2008-01-21", + "modifiedBy": "SBR", + "dateModified": "2018-01-19", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "443FAAF5-4176-370B-E044-0003BA3F9857", + "beginDate": "2008-01-21", + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": "2008-01-21", + "modifiedBy": "ALAIS", + "dateModified": "2008-01-21", + "deletedIndicator": "No" + }, + { + "value": "Midostaurin/Placebo", + "valueDescription": "Midostaurin/Placebo", + "ValueMeaning": { + "publicId": "2724332", + "version": "1", + "preferredName": "Midostaurin/Placebo", + "longName": "2724332", + "preferredDefinition": "Protein kinase C412 (Midostaurin) is an oral multitargeted kinase inhibitor/Placebo (An inactive substance or preparation used as a control in an experiment or test to determine the effectiveness of a medicinal drug) ", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "443FDD62-E1DC-4068-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2008-01-21", + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": "2008-01-21", + "modifiedBy": "SBR", + "dateModified": "2018-01-19", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "443FDE34-9D01-3E86-E044-0003BA3F9857", + "beginDate": "2008-01-21", + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": "2008-01-21", + "modifiedBy": "ONEDATA", + "dateModified": "2008-01-21", + "deletedIndicator": "No" + }, + { + "value": "Bevacizumab/Placebo", + "valueDescription": "Placebo Bevacizumab", + "ValueMeaning": { + "publicId": "2823335", + "version": "1", + "preferredName": "Placebo Bevacizumab", + "longName": "2823335", + "preferredDefinition": "An inactive substance, treatment or procedure that is intended to mimic as closely as possible a therapy in a clinical trial.: A monoclonal antibody that may prevent the growth of blood vessels from surrounding tissue to a solid tumor.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Placebo", + "conceptCode": "C753", + "definition": "An inactive substance, treatment or procedure that is intended to provide baseline measurements for the experimental protocol of a clinical trial.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "No", + "displayOrder": "1" + }, + { + "longName": "Bevacizumab", + "conceptCode": "C2039", + "definition": "A recombinant humanized monoclonal antibody directed against the vascular endothelial growth factor (VEGF), a pro-angiogenic cytokine. Bevacizumab binds to VEGF and inhibits VEGF receptor binding, thereby preventing the growth and maintenance of tumor blood vessels.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "604C2313-B7C6-101A-E040-BB89AD43675B", + "latestVersionIndicator": "Yes", + "beginDate": "2009-01-12", + "endDate": null, + "createdBy": "SHIDED", + "dateCreated": "2009-01-12", + "modifiedBy": "SBR", + "dateModified": "2018-01-19", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "604C2313-B7DF-101A-E040-BB89AD43675B", + "beginDate": "2009-01-12", + "endDate": null, + "createdBy": "CDECURATE", + "dateCreated": "2009-01-12", + "modifiedBy": "CDECURATE", + "dateModified": "2009-01-12", + "deletedIndicator": "No" + }, + { + "value": "Letrozole/Tamoxifen", + "valueDescription": "Tamoxifen Letrozole", + "ValueMeaning": { + "publicId": "2823336", + "version": "1", + "preferredName": "Tamoxifen Letrozole", + "longName": "2823336", + "preferredDefinition": "An antineoplastic nonsteroidal selective estrogen receptor modulator (SERM). Tamoxifen competitively inhibits the binding of estradiol to estrogen receptors, thereby preventing the receptor from binding to the estrogen-response element on DNA. The result is a reduction in DNA synthesis and cellular response to estrogen. In addition, tamoxifen up-regulates the production of transforming growth factor B (TGFb), a factor that inhibits tumor cell growth, and down-regulates insulin-like growth factor 1 (IGF-1), a factor that stimulates breast cancer cell growth. (NCI04): A nonsteroidal inhibitor of estrogen synthesis that resembles paclitaxel in chemical structure. As a third-generation aromatase inhibitor, letrozole selectively and reversibly inhibits aromatase, a cytochrome P-450 enzyme complex found in many tissues including those of the premenopausal ovary, liver, and breast; aromatase catalyzes the aromatization of androstenedione and testosterone into estrone and estradiol, the final step in estrogen biosynthesis. In estrogen-dependent breast cancers, ananstrozole may inhibit tumor growth. (NCI04)", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Tamoxifen Citrate", + "conceptCode": "C855", + "definition": "The citrate salt of an antineoplastic nonsteroidal selective estrogen receptor modulator (SERM). Tamoxifen competitively inhibits the binding of estradiol to estrogen receptors, thereby preventing the receptor from binding to the estrogen-response element on DNA. The result is a reduction in DNA synthesis and cellular response to estrogen. In addition, tamoxifen up-regulates the production of transforming growth factor B (TGFb), a factor that inhibits tumor cell growth, and down-regulates insulin-like growth factor 1 (IGF-1), a factor that stimulates breast cancer cell growth. Tamoxifen also down-regulates protein kinase C (PKC) expression in a dose-dependant manner, inhibiting signal transduction and producing an antiproliferative effect in tumors such as malignant glioma and other cancers that overexpress PKC.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "No", + "displayOrder": "1" + }, + { + "longName": "Letrozole", + "conceptCode": "C1527", + "definition": "A nonsteroidal inhibitor of estrogen synthesis with antineoplastic activity. As a third-generation aromatase inhibitor, letrozole selectively and reversibly inhibits aromatase, which may result in growth inhibition of estrogen-dependent breast cancer cells. Aromatase, a cytochrome P-450 enzyme localized to the endoplasmic reticulum of the cell and found in many tissues including those of the premenopausal ovary, liver, and breast, catalyzes the aromatization of androstenedione and testosterone into estrone and estradiol, the final step in estrogen biosynthesis.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "604C2313-B7EE-101A-E040-BB89AD43675B", + "latestVersionIndicator": "Yes", + "beginDate": "2009-01-12", + "endDate": null, + "createdBy": "SHIDED", + "dateCreated": "2009-01-12", + "modifiedBy": "SBR", + "dateModified": "2018-01-19", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "604C2313-B807-101A-E040-BB89AD43675B", + "beginDate": "2009-01-12", + "endDate": null, + "createdBy": "CDECURATE", + "dateCreated": "2009-01-12", + "modifiedBy": "CDECURATE", + "dateModified": "2009-01-12", + "deletedIndicator": "No" + }, + { + "value": "Interferon", + "valueDescription": "Interferon", + "ValueMeaning": { + "publicId": "3119698", + "version": "1", + "preferredName": "Interferon", + "longName": "3119698", + "preferredDefinition": "Human interferons have been classified into 3 groups: alpha, beta, and gamma. 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Both alpha- and beta-IFNs, previously designated type I, are acid-stable, but they differ immunologically and in regard to some biologic and physiochemical properties. The IFNs produced by virus-stimulated leukocytes (leukocyte IFNs) are predominantly of the alpha type. Those produced by lymphoblastoid cells are about 90% alpha and 10% beta. Induced fibroblasts produce mainly or exclusively the beta type. The alpha- and beta-IFNs differ widely in amino acid sequence. The gamma or immune IFNs, which are produced by T lymphocytes in response to mitogens or to antigens to which they are sensitized, are acid-labile and serologically distinct from alpha- and beta-IFNs. (from OMIM 147570)", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "8AE1E2A1-466C-6C31-E040-BB89AD434C6B", + "latestVersionIndicator": "Yes", + "beginDate": "2010-07-08", + "endDate": null, + "createdBy": "REEVESD", + "dateCreated": "2010-07-08", + "modifiedBy": "ONEDATA_WA", + "dateModified": "2023-02-16", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "09B95C5D-1C5D-87C6-E050-BB89AD4338B5", + "beginDate": "2014-12-08", + "endDate": null, + "createdBy": "ROUILLAS", + "dateCreated": "2014-12-08", + "modifiedBy": "ONEDATA", + "dateModified": "2014-12-08", + "deletedIndicator": "No" + }, + { + "value": "Indeterminant", + "valueDescription": "Indeterminant", + "ValueMeaning": { + "publicId": "4592211", + "version": "1", + "preferredName": "Indeterminant", + "longName": "4592211", + "preferredDefinition": "Indeterminant", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "07C3981A-FB9E-ADEA-E050-BB89AD432AE9", + "latestVersionIndicator": "Yes", + "beginDate": "2014-11-13", + "endDate": null, + "createdBy": "ROUILLAS", + "dateCreated": "2014-11-13", + "modifiedBy": "SBR", + "dateModified": "2018-01-19", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "07C3981A-FBB7-ADEA-E050-BB89AD432AE9", + "beginDate": "2014-11-13", + "endDate": null, + "createdBy": "ROUILLAS", + "dateCreated": "2014-11-13", + "modifiedBy": "ONEDATA", + "dateModified": "2014-11-13", + "deletedIndicator": "No" + }, + { + "value": "Both", + "valueDescription": "Both", + "ValueMeaning": { + "publicId": "2558322", + "version": "1", + "preferredName": "Both", + "longName": "2558322", + "preferredDefinition": "Two entities considered and identifed together.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Both", + "conceptCode": "C49636", + "definition": "One and the other; relating to or being two in conjunction.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "2509CE87-B0DF-5C23-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2002-02-13", + "endDate": null, + "createdBy": "SBR", + "dateCreated": "2002-02-13", + "modifiedBy": "REEVESD", + "dateModified": "2009-12-11", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "07C3981A-FBC1-ADEA-E050-BB89AD432AE9", + "beginDate": "2014-11-13", + "endDate": null, + "createdBy": "ROUILLAS", + "dateCreated": "2014-11-13", + "modifiedBy": "ONEDATA", + "dateModified": "2014-11-13", + "deletedIndicator": "No" + }, + { + "value": "Ipilimumab", + "valueDescription": "Ipilimumab", + "ValueMeaning": { + "publicId": "3185135", + "version": "1", + "preferredName": "Ipilimumab", + "longName": "3185135", + "preferredDefinition": "A monoclonal antibody directed against cytotoxic T-lymphocyte-associated antigen-4 (CTLA4), an antigen that is expressed on activated T-cells and exhibits affinity for B7 co-stimulatory molecules. By binding CTLA4, ipilimumab enhances T-cell activation and blocks B7-1 and B7-2 T-cell co-stimulatory pathways.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Ipilimumab", + "conceptCode": "C2654", + "definition": "A recombinant human immunoglobulin (Ig) G1 monoclonal antibody directed against the human T-cell receptor cytotoxic T-lymphocyte-associated antigen 4 (CTLA4), with immune checkpoint inhibitory and antineoplastic activities. Ipilimumab binds to CTLA4 expressed on T-cells and inhibits the CTLA4-mediated downregulation of T-cell activation. This leads to a cytotoxic T-lymphocyte (CTL)-mediated immune response against cancer cells. CTLA4, an inhibitory receptor and member of the immunoglobulin superfamily, plays a key role in the downregulation of the immune system.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "9A4E41E5-A2F1-57BF-E040-BB89AD4327A8", + "latestVersionIndicator": "Yes", + "beginDate": "2011-01-20", + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": "2011-01-20", + "modifiedBy": "KUMMEROA", + "dateModified": "2023-09-18", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": null, + "id": "07C3981A-FBCB-ADEA-E050-BB89AD432AE9", + "beginDate": "2014-11-13", + "endDate": null, + "createdBy": "ROUILLAS", + "dateCreated": "2014-11-13", + "modifiedBy": "ONEDATA", + "dateModified": "2014-11-13", + "deletedIndicator": "No" + }, + { + "value": "Bevacizumab", + "valueDescription": "Bevacizumab", + "ValueMeaning": { + "publicId": "2574306", + "version": "1", + "preferredName": "Bevacizumab", + "longName": "2574306", + "preferredDefinition": "A monoclonal antibody that may prevent the growth of blood vessels from surrounding tissue to a solid tumor.", + "context": "NCIP", + "contextVersion": "1", + "Concepts": [ + { + "longName": "Bevacizumab", + "conceptCode": "C2039", + "definition": "A recombinant humanized monoclonal antibody directed against the vascular endothelial growth factor (VEGF), a pro-angiogenic cytokine. 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{ + "longName": "Name", + "conceptCode": "C42614", + "definition": "The words or language units by which a thing is known.", + "evsSource": "NCI_CONCEPT_CODE", + "primaryIndicator": "Yes", + "displayOrder": "0" + } + ], + "origin": "NCI Thesaurus", + "workflowStatus": "RELEASED", + "registrationStatus": "Standard", + "id": "F6EF4E2B-76AE-72C1-E034-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2005-05-16", + "endDate": null, + "createdBy": "MAESKEB", + "dateCreated": "2005-05-16", + "modifiedBy": "ONEDATA", + "dateModified": "2005-05-16", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + }, + "origin": "CALGB CRF:Cancer and Leukemia Group B Case Report Form", + "workflowStatus": "RELEASED", + "registrationStatus": "Application", + "id": "443FAA61-4C23-3499-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2008-01-21", + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": 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"10000362", + "version": "1", + "longName": "AML Prev Untreated", + "context": "CTEP" + } + ] + }, + { + "publicId": "2008608", + "version": "1", + "longName": "Phase", + "context": "CTEP", + "ClassificationSchemeItems": [ + { + "publicId": "2811890", + "version": "1", + "longName": "Phase III", + "context": "CTEP" + } + ] + } + ], + "AlternateNames": [ + { + "name": "ECOG-ACRIN", + "type": "USED_BY", + "context": "ECOG-ACRIN" + } + ], + "ReferenceDocuments": [ + { + "name": "Attributable to which medicat", + "type": "Preferred Question Text", + "description": "Attributable to which medication", + "url": null, + "context": "CTEP" + }, + { + "name": "ECOG CRF Text 1", + "type": "Alternate Question Text", + "description": "Which agent is the AE more likely attributed to?", + "url": null, + "context": "ECOG-ACRIN" + } + ], + "origin": "CALGB CRF:Cancer and Leukemia Group B Case Report Form", + "workflowStatus": "RELEASED", + "registrationStatus": "Qualified", + "id": "443FCA28-F2F8-3CF6-E044-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2008-01-21", + "endDate": null, + "createdBy": "ALAIS", + "dateCreated": "2008-01-21", + "modifiedBy": "ROUILLAS", + "dateModified": "2014-11-24", + "changeDescription": null, + "administrativeNotes": null, + "unresolvedIssues": null, + "deletedIndicator": "No" + } +} diff --git a/tests/resources/cadsr-cde-996.json b/tests/resources/cadsr-cde-996.json new file mode 100644 index 0000000..98087cb --- /dev/null +++ b/tests/resources/cadsr-cde-996.json @@ -0,0 +1 @@ +{"DataElement":{"publicId":"996","version":"5","preferredName":"Prior Chemotherapy Administered End Date","preferredDefinition":"the end date for previous chemotherapy administered as treatment for this cancer.","longName":"PRIOR_CT_ADM_END_DT","context":"CTEP","contextVersion":"2.31","DataElementConcept":{"publicId":"2188711","version":"1","preferredName":"Prior Chemotherapy Administered","preferredDefinition":"information related to 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Ended","url":null,"context":"NRG"},{"name":"CRF Text5","type":"Alternate Question Text","description":"last date of chemotherapy","url":null,"context":"Alliance"},{"name":"Prior Therapies Form","type":"Alternate Question Text","description":"Date (most recent) prior chemotherapy ended","url":null,"context":"ECOG-ACRIN"},{"name":"CRF Text6","type":"Alternate Question Text","description":"last day of chemotherapy","url":null,"context":"Alliance"},{"name":"CRF Text7","type":"Alternate Question Text","description":"last day of neoadjuvant chemotherapy","url":null,"context":"Alliance"},{"name":"CRF Text8","type":"Alternate Question Text","description":"date of last chemotherapy","url":null,"context":"Alliance"},{"name":"CRF Text9","type":"Alternate Question Text","description":"Chemotherapy Completion Date","url":null,"context":"Alliance"},{"name":"Alliance A092105","type":"Alternate Question Text","description":"If Yes, Chemotherapy Completion Date","url":null,"context":"Alliance"}],"origin":null,"workflowStatus":"RELEASED","registrationStatus":"Qualified","id":"E55143E8-160F-321B-E034-0003BA3F9857","latestVersionIndicator":"Yes","beginDate":"2004-09-30","endDate":null,"createdBy":"CAMPBELB","dateCreated":"2004-09-30","modifiedBy":"ZHWENDY","dateModified":"2023-04-06","changeDescription":"ISO compliance.","administrativeNotes":"2023/4/4: Added AQT for Alliance.wz","unresolvedIssues":null,"deletedIndicator":"No"}} \ No newline at end of file diff --git a/tests/resources/cadsr-swagger.json b/tests/resources/cadsr-swagger.json new file mode 100644 index 0000000..8053b9d --- /dev/null +++ b/tests/resources/cadsr-swagger.json @@ -0,0 +1,1436 @@ +{ + "swagger" : "2.0", + "info" : { + "description" : "API for caDSR object structures.", + "version" : "1.0", + "title" : "NCI API" + }, + "host" : "cadsrapi.cancer.gov", + "basePath" : "/rad/NCIAPI/1.0/api", + "tags" : [ { + "name" : "Data Element", + "description" : "A unit of data for which the definition, identification, representation and permissible values are specified by means of a set of attributes." + } ], + "schemes" : [ "https" ], + "consumes" : [ "application/json" ], + "produces" : [ "application/json", "application/xml" ], + "paths" : { + "/DataElement/{publicId}" : { + "get" : { + "tags" : [ "Data Element" ], + "description" : "GET full representation of Data Element object including all of it's lower level objects such as Value Domain, Data Element Concept, and Classifications, Reference Documents including Question Texts.\r\n\r\nExamples:\r\n\r\n- To get the latest version of Data Element with publicID of 62:\r\n /DataElement/62\r\n\r\n\r\n- To get specific version (e.g. version 4) of Data Element with publicId of 62:\r\n /DataElement/62?version=4", + "operationId" : "DataElementpublicId_GET_1", + "parameters" : [ { + "name" : "publicId", + "in" : "path", + "description" : "The unique identifier for an Administered Item within a Registration Authority. Example: 62", + "required" : true, + "type" : "string" + }, { + "name" : "version", + "in" : "query", + "description" : "The unique version identifier of the Administered Item.", + "required" : false, + "type" : "string" + } ], + "responses" : { + "200" : { + "description" : "OK", + "schema" : { + "$ref" : "#/definitions/DataElementpublicId_GET_response" + } + }, + "401" : { + "description" : "Access Denied" + } + } + } + }, + "/DataElement/query" : { + "get" : { + "tags" : [ "Data Element" ], + "description" : "GET list of Data Element objects with top level properties ONLY. \r\n\r\nExamples:\r\n\r\n- To get all versions of Data Element with publicID of 62:\r\n /DataElement?publicId=62", + "operationId" : "DataElementquery_GET_2", + "consumes" : [ "application/json" ], + "produces" : [ "application/json", "application/xml" ], + "parameters" : [ { + "name" : "publicId", + "in" : "query", + "description" : "The unique identifier for an Administered Item within a Registration Authority. Example: 62", + "required" : false, + "type" : "string" + } ], + "responses" : { + "200" : { + "description" : "OK", + "schema" : { + "$ref" : "#/definitions/DataElementquery_GET_response" + } + }, + "401" : { + "description" : "Access Denied" + } + } + } + }, + "/DataElement/query/Concept" : { + "get" : { + "tags" : [ "Data Element" ], + "description" : "Search for Data Element objects by Concept fields. User may search by either Concept Name (conceptLongName) or Concept Code (conceptCode). \r\n
\r\nConcept search may also utilize the exactMatch flag. For example if \"Gender\" is the search term and exactMatch is set to false, the search will return wildcard concept names that CONTAIN \"*Gender*\". If exactMatch is set to true the search will return concept names that ONLY match \"Gender\". The same rules apply to conceptCode as well.\r\n
\r\nConcept searches are not case sensitive. For example, search terms \"Gender\" and \"geNdEr\" will return the same results.\r\n
\r\nThe user may also \"filter\" the initial results by fields such as Primary Indicator, Order, Status, etc. At a minimum, either conceptLongName or conceptCode must be provided in the search query or no results will be returned. \r\n
\r\nThe maximum number of results per query is 1000. Please refine your search to bring back fewer results.", + "operationId" : "DataElementqueryConcept_GET_3", + "parameters" : [ { + "name" : "conceptLongName", + "in" : "query", + "description" : "A name by which an Administered Item (e.g. Concept) is designated within a specific Context. Example: \"Gender\".", + "required" : false, + "type" : "string" + }, { + "name" : "conceptCode", + "in" : "query", + "description" : "A code by which a Concept is designated. An example code would be \"C17357\".", + "required" : false, + "type" : "string" + }, { + "name" : "exactMatch", + "in" : "query", + "description" : "A flag to indicate the search term should look for an exact match. The default value is \"false\".", + "required" : false, + "type" : "string" + }, { + "name" : "conceptPrimaryIndicatorFilter", + "in" : "query", + "description" : "Filter results on the Primary Indicator field. Examples are 1 for true, 0 for false. If no value is specified, all results will be returned.", + "required" : false, + "type" : "string" + }, { + "name" : "conceptDisplayOrderFilter", + "in" : "query", + "description" : "Filter results on the Display Order field. Examples are ordered values 0, 1, 2, etc. If no value is specified, all results will be returned.", + "required" : false, + "type" : "string" + }, { + "name" : "itemTypeFilter", + "in" : "query", + "description" : "Filter results returning only the parent objects the Concept is attributed to. Examples are \"Object Class\", \"Property\", \"Value Meaning\" or \"Representation Term\". If no value is specified, all results will be returned.", + "required" : false, + "type" : "string" + }, { + "name" : "workflowStatusFilter", + "in" : "query", + "description" : "Filter results on the Workflow Status of the Data Element. Example is \"RELEASED\". If no value is specified, all results will be returned.", + "required" : false, + "type" : "string" + } ], + "responses" : { + "200" : { + "description" : "OK", + "schema" : { + "$ref" : "#/definitions/DataElementqueryConcept_GET_response" + } + }, + "401" : { + "description" : "Access Denied" + } + } + } + }, + "/DataElement/getCRDCList" : { + "get" : { + "tags" : [ "Data Element" ], + "description" : "GET full representation of CRDC Data Elements.\r\n\r\nThere are no input parameters.", + "operationId" : "DataElementgetCRDCList_GET_4", + "parameters" : [ ], + "responses" : { + "200" : { + "description" : "OK", + "schema" : { + "$ref" : "#/definitions/DataElementgetCRDCList_GET_response" + } + }, + "401" : { + "description" : "Access Denied" + } + } + } + }, + "/DataElement/query/Context" : { + "get" : { + "tags" : [ "Data Element" ], + "description" : "GET list of Data Element objects by Context name with top level properties.\r\n\r\nExamples:\r\n\r\n- To get all versions of Data Element with context: NCI Standards\r\n /DataElement?contextName=NCI Standards", + "operationId" : "DataElementqueryContext_GET_5", + "parameters" : [ { + "name" : "contextName", + "in" : "query", + "description" : "The name of a Context object. Example: NCI Standards", + "required" : false, + "type" : "string" + } ], + "responses" : { + "200" : { + "description" : "OK", + "schema" : { + "$ref" : "#/definitions/DataElementqueryContext_GET_response" + } + }, + "401" : { + "description" : "Access Denied" + } + } + } + } + }, + "definitions" : { + "ClassificationScheme" : { + "required" : [ "context", "longName", "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string" + }, + "longName" : { + "type" : "string" + }, + "context" : { + "type" : "string" + }, + "ClassificationSchemeItems" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/ClassificationSchemeItem" + } + } + } + }, + "Property" : { + "required" : [ "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "context" : { + "type" : "string", + "description" : "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion" : { + "type" : "string" + }, + "Concepts" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/Concept" + } + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeDescription" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "DataElementpublicId_GET_response" : { + "required" : [ "DataElement" ], + "properties" : { + "DataElement" : { + "$ref" : "#/definitions/DataElement" + } + } + }, + "DataElementgetCRDCList_GET_response" : { + "required" : [ "CRDCDataElements" ], + "properties" : { + "CRDCDataElements" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/CRDCDataElement" + } + } + } + }, + "DataElementqueryContext_GET_response" : { + "required" : [ "DataElementQueryResults", "numRecords" ], + "properties" : { + "numRecords" : { + "type" : "string" + }, + "DataElementQueryResults" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/DataElementQuery" + } + } + } + }, + "AlternateName" : { + "required" : [ "context", "name", "type" ], + "properties" : { + "name" : { + "type" : "string" + }, + "type" : { + "type" : "string" + }, + "context" : { + "type" : "string" + } + } + }, + "CRDCDataElement" : { + "properties" : { + "CDE Public ID" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "Version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "CRDC Name" : { + "type" : "string", + "description" : "CRDC Name" + }, + "CRD Domain" : { + "type" : "string", + "description" : "CRDC Domain" + }, + "Example" : { + "type" : "string", + "description" : "CRDC Example" + }, + "VD Type" : { + "type" : "string", + "description" : "Value Domain type" + }, + "Coding Instruction" : { + "type" : "string", + "description" : "CRDC Coding Instructions" + }, + "Instructions" : { + "type" : "string", + "description" : "CRDC Instructions" + }, + "CRDC Definition" : { + "type" : "string", + "description" : "CRD Definition" + }, + "CDE Long Name" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "Registration Status" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "Workflow Status" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "Owned By" : { + "type" : "string", + "description" : "Who owns the Data Element" + }, + "Used By" : { + "type" : "string", + "description" : "Who is using the Data Element" + }, + "Deep Link" : { + "type" : "string" + }, + "permissibleValues" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/permissibleValue" + } + } + } + }, + "ConceptualDomain" : { + "required" : [ "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "context" : { + "type" : "string", + "description" : "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion" : { + "type" : "string" + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeDescription" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "ClassificationSchemeItem" : { + "required" : [ "context", "longName", "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string" + }, + "longName" : { + "type" : "string" + }, + "context" : { + "type" : "string" + } + } + }, + "DataElementqueryConcept_GET_response" : { + "required" : [ "DataElementQueryResults", "numRecords" ], + "properties" : { + "numRecords" : { + "type" : "string" + }, + "DataElementQueryResults" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/DataElementQuery" + } + } + } + }, + "DataElement" : { + "required" : [ "AlternateNames", "ClassificationSchemes", "DataElementConcept", "ReferenceDocuments", "ValueDomain", "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "context" : { + "type" : "string", + "description" : "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion" : { + "type" : "string" + }, + "DataElementConcept" : { + "$ref" : "#/definitions/DataElementConcept" + }, + "ValueDomain" : { + "$ref" : "#/definitions/ValueDomain" + }, + "ClassificationSchemes" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/ClassificationScheme" + } + }, + "AlternateNames" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/AlternateName" + } + }, + "ReferenceDocuments" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/ReferenceDocument" + } + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeDescription" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "ValueDomain" : { + "required" : [ "ConceptualDomain", "PermissibleValues", "RepresentationTerm", "characterSet", "context", "contextVersion", "dataType", "decimalPlace", "format", "longName", "maxLength", "maxValue", "minLength", "minValue", "preferredDefinition", "preferredName", "publicId", "type", "unitOfMeasure", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "context" : { + "type" : "string", + "description" : "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion" : { + "type" : "string" + }, + "type" : { + "type" : "string" + }, + "dataType" : { + "type" : "string" + }, + "unitOfMeasure" : { + "type" : "string" + }, + "characterSet" : { + "type" : "string" + }, + "minLength" : { + "type" : "string" + }, + "maxLength" : { + "type" : "string" + }, + "minValue" : { + "type" : "string" + }, + "maxValue" : { + "type" : "string" + }, + "decimalPlace" : { + "type" : "string" + }, + "format" : { + "type" : "string" + }, + "PermissibleValues" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/PermissibleValue" + } + }, + "ConceptualDomain" : { + "$ref" : "#/definitions/ConceptualDomain" + }, + "RepresentationTerm" : { + "$ref" : "#/definitions/RepresentationTerm" + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeDescription" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "ObjectClass" : { + "required" : [ "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "context" : { + "type" : "string", + "description" : "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion" : { + "type" : "string" + }, + "Concepts" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/Concept" + } + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeDescription" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "DataElementquery_GET_response" : { + "required" : [ "DataElementQueryResults", "numRecords" ], + "properties" : { + "numRecords" : { + "type" : "string" + }, + "DataElementQueryResults" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/DataElementQuery" + } + } + } + }, + "Concept" : { + "properties" : { + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "conceptCode" : { + "type" : "string" + }, + "definition" : { + "type" : "string" + }, + "evsSource" : { + "type" : "string", + "description" : "The name of the EVS concept code that was the source for the concept identifier." + }, + "primaryIndicator" : { + "type" : "string" + }, + "displayOrder" : { + "type" : "string" + } + } + }, + "DataElementConcept" : { + "required" : [ "ConceptualDomain", "ObjectClass", "Property", "context", "contextVersion", "longName", "preferredDefinition", "preferredName", "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "context" : { + "type" : "string", + "description" : "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion" : { + "type" : "string" + }, + "ObjectClass" : { + "$ref" : "#/definitions/ObjectClass" + }, + "Property" : { + "$ref" : "#/definitions/Property" + }, + "ConceptualDomain" : { + "$ref" : "#/definitions/ConceptualDomain" + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeDescription" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "ValueMeaning" : { + "required" : [ "context", "contextVersion", "longName", "preferredDefinition", "preferredName", "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "context" : { + "type" : "string", + "description" : "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion" : { + "type" : "string" + }, + "Concepts" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/Concept" + } + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeDescription" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "RepresentationTerm" : { + "required" : [ "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "context" : { + "type" : "string", + "description" : "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion" : { + "type" : "string" + }, + "Concepts" : { + "type" : "array", + "items" : { + "$ref" : "#/definitions/Concept" + } + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeDescription" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "ReferenceDocument" : { + "properties" : { + "name" : { + "type" : "string" + }, + "type" : { + "type" : "string" + }, + "description" : { + "type" : "string" + }, + "url" : { + "type" : "string" + }, + "context" : { + "type" : "string" + } + } + }, + "PermissibleValue" : { + "required" : [ "ValueMeaning", "publicId", "value", "valueDescription" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for a Permissible Value" + }, + "value" : { + "type" : "string", + "description" : "A representation of a Value Meaning in a specific Value Domain the actual Value." + }, + "valueDescription" : { + "type" : "string", + "description" : "The text of the most desirable meaning for Value" + }, + "ValueMeaning" : { + "$ref" : "#/definitions/ValueMeaning" + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "DataElementQuery" : { + "required" : [ "publicId", "version" ], + "properties" : { + "publicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "version" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "preferredName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context. Referred to as Short Name." + }, + "preferredDefinition" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "longName" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "contextName" : { + "type" : "string", + "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "contextVersion" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "dataElementConceptPublicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "dataElementConceptVersion" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "valueDomainPublicId" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "valueDomainVersion" : { + "type" : "string", + "description" : "The unique version identifier of the Administered Item." + }, + "origin" : { + "type" : "string", + "description" : "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus" : { + "type" : "string", + "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus" : { + "type" : "string", + "description" : "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id" : { + "type" : "string", + "description" : "The 36 character caDSR database identifier." + }, + "latestVersionIndicator" : { + "type" : "string", + "description" : "The present form of an Administered Item." + }, + "beginDate" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "endDate" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + }, + "createdBy" : { + "type" : "string", + "description" : "This is a description of createdBy." + }, + "dateCreated" : { + "type" : "string", + "description" : "The date the Administered Item was created." + }, + "modifiedBy" : { + "type" : "string", + "description" : "Username of the person who modified the record" + }, + "dateModified" : { + "type" : "string", + "description" : "Date on which the record was modified; last date the object was modified" + }, + "changeNote" : { + "type" : "string", + "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes" : { + "type" : "string" + }, + "unresolvedIssues" : { + "type" : "string", + "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator" : { + "type" : "string", + "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + } + } + }, + "permissibleValue" : { + "properties" : { + "Permissible Value" : { + "type" : "string", + "description" : "A representation of a Value Meaning in a specific Value Domain the actual Value." + }, + "VM Long Name" : { + "type" : "string", + "description" : "A 255 character limit name for an item in the registry." + }, + "VM Public ID" : { + "type" : "string", + "description" : "The unique identifier for an Administered Item within a Registration Authority." + }, + "Concept Code" : { + "type" : "string" + }, + "VM Description" : { + "type" : "string", + "description" : "The text of the most desirable meaning for the Administered Item." + }, + "Begin Date" : { + "type" : "string", + "description" : "The particular day, month and year this item became allowed." + }, + "End Date" : { + "type" : "string", + "description" : "The day, month and year this item becomes no longer allowed." + } + }, + "description" : "List of Permissible Values" + } + } +} diff --git a/tests/test_importers/test_cadsr_importer.py b/tests/test_importers/test_cadsr_importer.py new file mode 100644 index 0000000..d97bdbd --- /dev/null +++ b/tests/test_importers/test_cadsr_importer.py @@ -0,0 +1,26 @@ +import os + +from linkml.generators import PythonGenerator, OwlSchemaGenerator +from linkml_runtime import SchemaView + +from schema_automator.importers.cadsr_import_engine import CADSRImportEngine +from schema_automator.utils import write_schema +from tests import INPUT_DIR, OUTPUT_DIR + +IDS = ["996", "12137353", "2724331", "2721353", "2179609"] +OUT = os.path.join(OUTPUT_DIR, "cadsr-cde-example.yaml") +OWL_OUT = os.path.join(OUTPUT_DIR, "cadsr-cde-example.owl.ttl") + + +def test_cadsr_import(): + ie = CADSRImportEngine() + paths = [os.path.join(INPUT_DIR, f"cadsr-cde-{i}.json") for i in IDS] + schema = ie.convert(paths, id="https://w3id.org/linkml/cadsr", name="cadsr_schema") + assert schema + write_schema(schema, OUT) + py_str = PythonGenerator(OUT).serialize() + assert py_str + _sv = SchemaView(schema) + with open(OWL_OUT, "w", encoding="utf-8") as stream: + owlgen = OwlSchemaGenerator(OUT, add_root_classes=True, metaclasses=False, type_objects=False) + stream.write(owlgen.serialize()) \ No newline at end of file diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index 8bc264b..98b44ca 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -5,6 +5,8 @@ import unittest import os import yaml +from linkml_runtime import SchemaView + from schema_automator.importers.owl_import_engine import OwlImportEngine from linkml.generators.yamlgen import YAMLGenerator from schema_automator.importers.rdfs_import_engine import RdfsImportEngine @@ -16,16 +18,25 @@ OUTSCHEMA = os.path.join(OUTPUT_DIR, 'reproschema-from-ttl.yaml') -class TestRdfsImporter(unittest.TestCase): - """tests importing rdf schema """ - def test_from_rdfs(self): - """Test OWL conversion.""" - oie = RdfsImportEngine() - schema = oie.convert(REPRO, default_prefix='reproschema', identifier='id') - write_schema(schema, OUTSCHEMA) - # roundtrip - s = YAMLGenerator(OUTSCHEMA).serialize() - print(s[0:100]) +def test_from_rdfs(): + """Test OWL conversion.""" + oie = RdfsImportEngine() + schema = oie.convert(REPRO, default_prefix='reproschema', identifier='id') + write_schema(schema, OUTSCHEMA) + # roundtrip + s = YAMLGenerator(OUTSCHEMA).serialize() + print(s[0:100]) + sv = SchemaView(OUTSCHEMA) + activity = sv.get_class("Activity") + assert activity + assert activity.name == "Activity" + assert activity.is_a == "CreativeWork" + slots = sv.class_induced_slots(activity.name) + assert len(slots) == 1 + slot = slots[0] + assert slot.name == "id" + + From 8428e9c0a31700198d05ad10d8e960f1d74d040e Mon Sep 17 00:00:00 2001 From: Yaroslav Halchenko Date: Mon, 26 Feb 2024 16:55:40 -0500 Subject: [PATCH 12/88] Add codespell config and workflow and fix a few typos (#129) * Add github action to codespell main on push and PRs * Add rudimentary codespell config * ignore all resources and sie variable and OGER name * [DATALAD RUNCMD] run codespell throughout but ignore fail === Do not change lines below === { "chain": [], "cmd": "codespell -w || :", "exit": 0, "extra_inputs": [], "inputs": [], "outputs": [], "pwd": "." } ^^^ Do not change lines above ^^^ * [DATALAD RUNCMD] Do interactive fixing of typos === Do not change lines below === { "chain": [], "cmd": "codespell -w -i 3 -C 2", "exit": 0, "extra_inputs": [], "inputs": [], "outputs": [], "pwd": "." } ^^^ Do not change lines above ^^^ --- .github/workflows/codespell.yml | 23 +++++++++++++++++++ CONTRIBUTING.md | 2 +- pyproject.toml | 7 ++++++ schema_automator/annotators/enum_annotator.py | 2 +- schema_automator/cli.py | 2 +- .../generalizers/csv_data_generalizer.py | 2 +- .../metamodels/dosdp/dosdp_linkml.yaml | 4 ++-- 7 files changed, 36 insertions(+), 6 deletions(-) create mode 100644 .github/workflows/codespell.yml diff --git a/.github/workflows/codespell.yml b/.github/workflows/codespell.yml new file mode 100644 index 0000000..dd0eb8e --- /dev/null +++ b/.github/workflows/codespell.yml @@ -0,0 +1,23 @@ +# Codespell configuration is within pyproject.toml +--- +name: Codespell + +on: + push: + branches: [main] + pull_request: + branches: [main] + +permissions: + contents: read + +jobs: + codespell: + name: Check for spelling errors + runs-on: ubuntu-latest + + steps: + - name: Checkout + uses: actions/checkout@v4 + - name: Codespell + uses: codespell-project/actions-codespell@v2 diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index 77f7219..b7902ab 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -78,7 +78,7 @@ that you can use as a starting point. ## How to Request an Enhancement -We welcome request for enhancements and you can make these requestes via the issue tracker. Please be sure to provide +We welcome request for enhancements and you can make these requests via the issue tracker. Please be sure to provide sufficient context to what the enhancement is trying to address, its utility, and how it's likely to be useful to you and the broader community. diff --git a/pyproject.toml b/pyproject.toml index 7196930..3f6a701 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -57,3 +57,10 @@ extract-schema = "schema_automator.utils.schema_extractor:cli" [tool.poetry.extras] docs = ["Sphinx", "sphinx-pdj-theme", "sphinxcontrib-mermaid"] mariadb = ["mariadb"] + +[tool.codespell] +# Ref: https://github.com/codespell-project/codespell#using-a-config-file +skip = '.git,*.lock,resources' +check-hidden = true +ignore-regex = '\bOGER\b' +ignore-words-list = 'sie' diff --git a/schema_automator/annotators/enum_annotator.py b/schema_automator/annotators/enum_annotator.py index 1b3f85b..3a8b5ee 100644 --- a/schema_automator/annotators/enum_annotator.py +++ b/schema_automator/annotators/enum_annotator.py @@ -214,7 +214,7 @@ def get_ols_term_annotations(iri_param, ontology_param, session_param, ols_terms default=2, show_default=True) @click.option('--max_cosine', help="""how much of a cosine distance will you tolerate - when comparing an enum name to a term lable or synonym?""", + when comparing an enum name to a term label or synonym?""", default=0.05, show_default=True) @click.option('--query_field_string', help="""do you want to define a custom list of fields to search in? diff --git a/schema_automator/cli.py b/schema_automator/cli.py index c4e47ef..75a4cf1 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -447,7 +447,7 @@ def import_owl(owlfile, output, **args): @click.option('--identifier', '-I', help="Slot to use as identifier") @click.option('--model-uri', help="Model URI prefix") @click.option('--metamodel-mappings', - help="Path to metamodel mappings YAML dicitonary") + help="Path to metamodel mappings YAML dictionary") @click.option('--output', '-o', help="Path to saved yaml schema") def import_rdfs(rdfsfile, output, metamodel_mappings, **args): """ diff --git a/schema_automator/generalizers/csv_data_generalizer.py b/schema_automator/generalizers/csv_data_generalizer.py index cb8c6e8..2f8c196 100644 --- a/schema_automator/generalizers/csv_data_generalizer.py +++ b/schema_automator/generalizers/csv_data_generalizer.py @@ -86,7 +86,7 @@ class CsvDataGeneralizer(Generalizer): """If number if distinct values divided by total number of values is greater than this, then the column is considered an enum""" enum_strlen_threshold: int = 30 - """Maximimum length of a string to be considered a permissible enum value""" + """Maximum length of a string to be considered a permissible enum value""" max_enum_size: int = 50 """Max number of permissible values for a column to be considered an enum""" diff --git a/schema_automator/metamodels/dosdp/dosdp_linkml.yaml b/schema_automator/metamodels/dosdp/dosdp_linkml.yaml index ce78644..f703bd4 100644 --- a/schema_automator/metamodels/dosdp/dosdp_linkml.yaml +++ b/schema_automator/metamodels/dosdp/dosdp_linkml.yaml @@ -117,7 +117,7 @@ classes: inlined: true range: VarDeclaration list_vars: - description: A dictionary of variables refering to lists of owl classes. Key + description: A dictionary of variables referring to lists of owl classes. Key = variable name, value = variable range of items in list specified as a valid OWL data-type. data_vars: @@ -522,7 +522,7 @@ slots: description: 'A dictionary of OWL annotation properties key : label; value : short form id' list_vars: - description: A dictionary of variables refering to lists of owl classes. Key = + description: A dictionary of variables referring to lists of owl classes. Key = variable name, value = variable range of items in list specified as a valid OWL data-type. data_vars: From c743fd0b38d529290a1685da30ab99fe26741132 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Tue, 5 Mar 2024 18:41:32 -0800 Subject: [PATCH 13/88] metamodel docs (#133) * Adding metamodel docs * Adding docs target. Sphinx update * docs-target --- .github/workflows/doc_pages.yaml | 3 +- Makefile | 73 +-- docs/conf.py | 36 +- docs/index.rst | 1 + docs/metamodels/index.rst | 23 + poetry.lock | 961 ++++++++++++++----------------- pyproject.toml | 2 +- 7 files changed, 491 insertions(+), 608 deletions(-) create mode 100644 docs/metamodels/index.rst diff --git a/.github/workflows/doc_pages.yaml b/.github/workflows/doc_pages.yaml index a6a0669..510ecd4 100644 --- a/.github/workflows/doc_pages.yaml +++ b/.github/workflows/doc_pages.yaml @@ -27,6 +27,7 @@ jobs: run: | mkdir gh-pages touch gh-pages/.nojekyll + make all-docs cd docs/ poetry run sphinx-build -b html . _build cp -r _build/* ../gh-pages/ @@ -37,4 +38,4 @@ jobs: with: branch: gh-pages force: true - folder: gh-pages \ No newline at end of file + folder: gh-pages diff --git a/Makefile b/Makefile index 0e7e671..ad4a5a1 100644 --- a/Makefile +++ b/Makefile @@ -1,76 +1,39 @@ RUN = poetry run VERSION = $(shell git tag | tail -1) +MODELS = cadsr frictionless -.PHONY: all clean test +.PHONY: all clean test all-docs sphinx-html -all: clean test target/soil_meanings.yaml +all: clean test -clean: - rm -rf target/soil_meanings.yaml - rm -rf target/soil_meanings_generated.yaml - rm -rf target/availabilities_g_s_strain_202112151116.yaml - rm -rf target/availabilities_g_s_strain_202112151116_org_meanings.yaml - test: $(RUN) pytest tests/ schema_automator/metamodels/%.py: schema_automator/metamodels/%.yaml $(RUN) gen-python $< > $@.tmp && mv $@.tmp $@ -# tried to find a single meaning for each permissible value -# unlike term mapping, which can tolerate multiple mapped terms -target/soil_meanings.yaml: tests/resources/mixs/terms.yaml - poetry run enum_annotator \ - --modelfile $< \ - --requested_enum_name fao_class_enum \ - --ontology_string ENVO > $@ - -# validate that it's still valid LinkML -# FileNotFoundError: [Errno 2] No such file or directory: '/Users/MAM/Documents/gitrepos/linkml-model-enrichment/target/ranges.yaml' -# cp tests/resources/mixs/*yaml target -target/soil_meanings_generated.yaml: target/soil_meanings.yaml - poetry run gen-yaml $< > $@ - -# requires Felix files -# add demonstration SQL file -target/availabilities_g_s_strain_202112151116.yaml: local/availabilities_g_s_strain_202112151116.tsv - poetry run tsv2linkml \ - --enum-columns organism \ - --output $@ \ - --class_name availabilities \ - --schema_name availabilities $< - -# KeyError: 'iri' could mean that an unrecognized ontology name was used -target/availabilities_g_s_strain_202112151116_org_meanings.yaml: target/availabilities_g_s_strain_202112151116.yaml - poetry run enum_annotator \ - --modelfile $< \ - --requested_enum_name organism_enum \ - --ontology_string NCBITAXON > $@ - -target/availabilities_g_s_strain_202112151116_org_meanings_curateable.tsv: target/availabilities_g_s_strain_202112151116_org_meanings.yaml - poetry run enums_to_curateable \ - --modelfile $< \ - --enum organism_enum \ - --tsv_out $@ - -# do some curation on target/availabilities_g_s_strain_202112151116_org_meanings_curateable.tsv -# and save as target/availabilities_g_s_strain_202112151116_org_meanings_curated.txt -# Excel wants to call it "*.txt". I'm saving as UTF 16 so I can be sure about the encoding at import time. - -target/availabilities_g_s_strain_202112151116_org_meanings_curated.yaml: target/availabilities_g_s_strain_202112151116_org_meanings_curated.txt - poetry run curated_to_enums \ - --tsv_in $< \ - --tsv_encoding utf_16 \ - --model_in target/availabilities_g_s_strain_202112151116_org_meanings.yaml \ - --curated_yaml $@ \ - --selected_enum organism_enum # create a convenient wrapper script; # this can be used outside the poetry environment bin/schemauto: echo `poetry run which schemauto` '"$$@"' > $@ && chmod +x $@ +######################## +#### Metamodel docs #### +######################## + +all-docs: $(patsubst %,docs-%,$(MODELS)) + +docs-dosdp: schema_automator/metamodels/dosdp/dosdp_linkml.yaml + $(RUN) gen-doc -d docs/metamodels/dosdp $< + +docs-%: schema_automator/metamodels/%.yaml + $(RUN) gen-doc -d docs/metamodels/$* $< + +sphinx-%: + cd docs && $(RUN) make $* +.PHONY: sphinx-% ################################################ #### Commands for building the Docker image #### diff --git a/docs/conf.py b/docs/conf.py index b45bdcc..ac52fa6 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -33,32 +33,32 @@ # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ - 'sphinx.ext.autodoc', - 'sphinx.ext.githubpages', - 'sphinx.ext.autosectionlabel', - 'sphinx_pdj_theme', - 'sphinx_click', - 'sphinx.ext.viewcode', - 'sphinx.ext.todo', - 'sphinx.ext.coverage', - 'sphinx.ext.autosummary', - 'myst_parser', - 'sphinx.ext.intersphinx', - 'sphinxcontrib.mermaid' + "sphinx.ext.autodoc", + "sphinx.ext.githubpages", + "sphinx.ext.autosectionlabel", + "sphinx_pdj_theme", + "sphinx_click", + "sphinx.ext.viewcode", + "sphinx.ext.todo", + "sphinx.ext.coverage", + "sphinx.ext.autosummary", + "myst_parser", + "sphinx.ext.intersphinx", + "sphinxcontrib.mermaid" ] # The suffix(es) of source filenames. # You can specify multiple suffix as a list of string: -# source_suffix = ['.rst', '.md'] -source_suffix = ['.rst', '.md'] +# source_suffix = [".rst", ".md"] +source_suffix = [".rst", ".md"] # Add any paths that contain templates here, relative to this directory. -templates_path = ['_templates'] +templates_path = ["_templates"] # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This pattern also affects html_static_path and html_extra_path. -exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store'] +exclude_patterns = ["_build", "Thumbs.db", ".DS_Store"] # -- Options for HTML output ------------------------------------------------- @@ -66,10 +66,10 @@ # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. # -#html_theme = 'sphinx_pdj_theme' +#html_theme = "sphinx_pdj_theme" #html_theme_path = [sphinx_pdj_theme.get_html_theme_path()] # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". -html_static_path = ['_static'] +html_static_path = ["_static"] diff --git a/docs/index.rst b/docs/index.rst index dfd4006..1c11982 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -28,6 +28,7 @@ schema frameworks, including: install cli packages/index + metamodels/index Indices and tables diff --git a/docs/metamodels/index.rst b/docs/metamodels/index.rst new file mode 100644 index 0000000..4df48cb --- /dev/null +++ b/docs/metamodels/index.rst @@ -0,0 +1,23 @@ +Source Metamodels +================= + +Schema Automator makes use of LinkML Schema representations of source +metamodels in order to define transformations. + +.. toctree:: + :maxdepth: 3 + :caption: Contents: + + index + cadsr/index + frictionless/index + dosdp/index + fhir/index + + +Indices and tables +================== + +* :ref:`genindex` +* :ref:`modindex` +* :ref:`search` diff --git a/poetry.lock b/poetry.lock index eba0cac..34cffab 100644 --- a/poetry.lock +++ b/poetry.lock @@ -53,14 +53,14 @@ files = [ [[package]] name = "anyio" -version = "4.2.0" +version = "4.3.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" category = "dev" optional = false python-versions = ">=3.8" files = [ - 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python-versions = "^3.9" -content-hash = "edb0658566f95ab75690a51a7abe039c30734f24cf81a5ab0e670d1693755be2" +content-hash = "14010772a2ea7449e1e46170106c1eeee97480d74b6a3897f8614d8e51e602e7" diff --git a/pyproject.toml b/pyproject.toml index 3f6a701..c20b7ab 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -38,7 +38,7 @@ pytest = ">=7.1.1" Sphinx = ">=4.4.0" sphinx-pdj-theme = ">=0.2.1" sphinx-click = ">=3.1.0" -sphinxcontrib-mermaid = ">=0.7.1" +sphinxcontrib-mermaid = ">=0.9.2" myst-parser = "*" jupyter = ">=1.0.0" lxml = ">=4.9.1" From 398e7f9f2abfdafbb2cae8e8df905d4ab51795c2 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Fri, 22 Mar 2024 16:33:57 -0700 Subject: [PATCH 14/88] kwalify importer (#136) * Kwalify importer * test-files * Fixed test --- docs/packages/importers.rst | 9 + poetry.lock | 59 +- pyproject.toml | 1 + schema_automator/cli.py | 26 + .../infer_model_from_rdftab.py | 0 .../importers/cadsr_import_engine.py | 118 +- .../importers/jsonschema_import_engine.py | 26 +- .../importers/kwalify_import_engine.py | 109 + .../importers/rdfs_import_engine.py | 28 +- tests/resources/cadsr-cde-217609.json | 0 tests/resources/cadsr-cde-996.json | 742 ++++- tests/resources/cadsr-swagger.json | 2570 +++++++++-------- tests/resources/test.kwalify.yaml | 71 + tests/resources/test2.kwalify.yaml | 149 + tests/test_importers/test_cadsr_importer.py | 11 +- tests/test_importers/test_kwalify_importer.py | 53 + 16 files changed, 2721 insertions(+), 1251 deletions(-) rename schema_automator/{importers => generalizers}/infer_model_from_rdftab.py (100%) create mode 100644 schema_automator/importers/kwalify_import_engine.py delete mode 100644 tests/resources/cadsr-cde-217609.json create mode 100644 tests/resources/test.kwalify.yaml create mode 100644 tests/resources/test2.kwalify.yaml create mode 100644 tests/test_importers/test_kwalify_importer.py diff --git a/docs/packages/importers.rst b/docs/packages/importers.rst index 1c48fc8..64548ff 100644 --- 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index 75a4cf1..18c33ef 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -26,6 +26,7 @@ from schema_automator.importers.dosdp_import_engine import DOSDPImportEngine from schema_automator.generalizers.json_instance_generalizer import JsonDataGeneralizer from schema_automator.importers.jsonschema_import_engine import JsonSchemaImportEngine +from schema_automator.importers.kwalify_import_engine import KwalifyImportEngine from schema_automator.importers.owl_import_engine import OwlImportEngine from schema_automator.generalizers.rdf_data_generalizer import RdfDataGeneralizer from schema_automator.importers.rdfs_import_engine import RdfsImportEngine @@ -347,6 +348,12 @@ def generalize_toml(input, output, schema_name, omit_null, **kwargs): @output_option @schema_name_option @use_attributes_option +@click.option( + "--is-openapi/--no-is-openapi", + default=False, + show_default=True, + help="If true, use OpenAPI schema style" +) @click.option("--import-project/--no-import-project", help="If true, then the input path should be a directory with multiple schema files") @click.option('--format', '-f', default='json', help='JSON Schema format - yaml or json') @@ -370,6 +377,25 @@ def import_json_schema(input, output, import_project: bool, schema_name, format, ie.import_project(input, output, name=schema_name, format=format) +@main.command() +@click.argument('input') +@output_option +@schema_name_option +@use_attributes_option +def import_kwalify(input, output, schema_name, **kwargs): + """ + Imports from Kwalify Schema to LinkML + + See :ref:`importers` for more on the importer framework + + Example: + + schemauto import-kwalify my/schema/personinfo.kwalify.yaml + """ + ie = KwalifyImportEngine(**kwargs) + schema = ie.convert(input, output, name=schema_name, format=format) + write_schema(schema, output) + @main.command() @click.argument('input') @output_option diff --git a/schema_automator/importers/infer_model_from_rdftab.py b/schema_automator/generalizers/infer_model_from_rdftab.py similarity index 100% rename from schema_automator/importers/infer_model_from_rdftab.py rename to schema_automator/generalizers/infer_model_from_rdftab.py diff --git a/schema_automator/importers/cadsr_import_engine.py b/schema_automator/importers/cadsr_import_engine.py index 0ec7ac1..6f44a77 100644 --- a/schema_automator/importers/cadsr_import_engine.py +++ b/schema_automator/importers/cadsr_import_engine.py @@ -5,7 +5,7 @@ """ import logging import urllib -from typing import Union, Dict, Tuple, List, Any, Optional, Iterable +from typing import Union, Dict, Tuple, List, Any, Optional, Iterable, Iterator from dataclasses import dataclass @@ -19,6 +19,7 @@ from schema_automator.importers.import_engine import ImportEngine import schema_automator.metamodels.cadsr as cadsr +ID_LABEL_PAIR = Tuple[str, str] TMAP = { "DATE": "date", @@ -38,6 +39,28 @@ "Floating-point": "float", } +def extract_concepts(concepts: List[cadsr.Concept]) -> Tuple[ID_LABEL_PAIR, List[str]]: + main = None + rest = [] + if not concepts: + raise ValueError("No concepts") + for concept in concepts: + if concept.evsSource != "NCI_CONCEPT_CODE": + continue + id = f"NCIT:{concept.conceptCode.strip()}" + pair = id, concept.longName + if concept.primaryIndicator == "Yes": + if main: + raise ValueError(f"Multiple primary for: {concepts}") + main = pair + else: + rest.append(id) + if not main: + logging.warning(f"No primary, using arbitrary from {rest}") + main = rest[0] + rest = rest[1:] + return main, rest + @dataclass class CADSRImportEngine(ImportEngine): """ @@ -94,19 +117,30 @@ def convert(self, paths: Iterable[str], id: str=None, name: str=None, **kwargs) title=cde.preferredName, description=cde.preferredDefinition, aliases=[cde.longName], + conforms_to=f"cadsr:DataElement", source=source, ) + # each data element belongs to a concept + # (may be reused across classes?) slots[slot.name] = slot concept = cde.DataElementConcept - concept_name = urllib.parse.quote(camelcase(f"{ctxt} {concept.preferredName}")) - parent_concept_name = urllib.parse.quote(camelcase(concept.longName)) + # a concept is linked to a class + objectClass = concept.ObjectClass + # NCIT concepts describing the class + mainConcept, mappings = extract_concepts(objectClass.Concepts) + class_name = objectClass.longName + concept_name = urllib.parse.quote(camelcase(f"{ctxt} {class_name}")) + parent_concept_name = urllib.parse.quote(class_name) if parent_concept_name not in classes: parent_cls = ClassDefinition( name=parent_concept_name, - title=concept.preferredName, - description=concept.preferredDefinition, + title=objectClass.preferredName, + description=objectClass.preferredDefinition, #aliases=[concept.longName], - class_uri=f"cadsr:{concept.publicId}", + class_uri=f"cadsr:{objectClass.publicId}", + exact_mappings=[mainConcept[0]], + broad_mappings=mappings, + conforms_to=f"cadsr:ObjectClass", ) classes[parent_concept_name] = parent_cls if concept_name not in classes: @@ -117,14 +151,23 @@ def convert(self, paths: Iterable[str], id: str=None, name: str=None, **kwargs) aliases=[concept.longName], class_uri=f"cadsr:{concept.publicId}", is_a=parent_concept_name, + conforms_to=f"cadsr:DataElementConcept", ) classes[concept_name] = cls else: cls = classes[concept_name] cls.slots.append(slot.name) - objectClass = concept.ObjectClass - # TODO + # In theory the ObjectClass should link to a general class of utility in NCIT. + # In practice the actual concept may not be so useful. E.g. in 2724331 + # "Agent Adverse Event Attribution Name" the DataConcept is + # Agent (C1708) defined as "An active power or cause (as principle, + # substance, physical or biological factor, etc.) that produces a specific effect." + # which is very upper-ontological + #for ocConcept in objectClass.Concepts: + # if ocConcept.evsSource == "NCI_CONCEPT_CODE": + # cls.is_a = f"NCIT:{ocConcept.conceptCode}" valueDomain = cde.ValueDomain + # TODO conceptualDomain = valueDomain.ConceptualDomain pvs = valueDomain.PermissibleValues if pvs: @@ -140,7 +183,7 @@ def convert(self, paths: Iterable[str], id: str=None, name: str=None, **kwargs) rng = enum_name for pv in pvs: # url encode the value to escape symbols like <, >, etc. - pv_value = urllib.parse.quote(pv.value) + pv_value = urllib.parse.quote(pv.value).replace("%20", " ") tgt_pv = PermissibleValue( text=pv_value, title=pv.value, @@ -151,9 +194,10 @@ def convert(self, paths: Iterable[str], id: str=None, name: str=None, **kwargs) tgt_pv.title = vm.preferredName if not tgt_pv.description: tgt_pv.description = vm.preferredDefinition - for c in vm.Concepts: - code = c.conceptCode.strip() - tgt_pv.meaning = f"NCIT:{code}" + if vm.Concepts: + mainConcept, mappings = extract_concepts(vm.Concepts) + tgt_pv.meaning = mainConcept[0] + tgt_pv.broad_mappings = mappings else: datatype = valueDomain.dataType rng = TMAP.get(datatype, "string") @@ -179,6 +223,56 @@ def convert(self, paths: Iterable[str], id: str=None, name: str=None, **kwargs) schema.enums = enums return schema + def as_rows(self, paths: Iterable[str], **kwargs) -> Iterator[Dict]: + for path in paths: + logging.info(f"Loading {path}") + with (open(path) as file): + container: cadsr.DataElementContainer + container = json_loader.load(file, target_class=cadsr.DataElementContainer) + cde = container.DataElement + yield from self._obj_as_rows(cde, path) + + def _obj_as_rows(self, e: Union[cadsr.DataElement, cadsr.DataElementConcept, cadsr.Concept, cadsr.Property, cadsr.ObjectClass, cadsr.ConceptualDomain, + cadsr.ValueDomain, cadsr.PermissibleValue, cadsr.ValueMeaning], parent_id: str) -> Iterator[Dict]: + if isinstance(e, cadsr.Concept): + obj = { + "id": e.conceptCode, + "context": e.evsSource, + "longName": e.longName, + } + elif isinstance(e, cadsr.CDEPermissibleValue): + obj = { + "id": e.publicId, + "value": e.value, + "valueDescription": e.valueDescription, + } + else: + obj = { + "id": e.publicId, + "preferredName": e.preferredName, + "context": e.context, + "longName": e.longName, + } + obj["parentId"] = parent_id + obj["type"] = type(e).class_name + id = obj["id"] + yield obj + if isinstance(e, cadsr.DataElement): + yield from self._obj_as_rows(e.DataElementConcept, id) + yield from self._obj_as_rows(e.ValueDomain, id) + elif isinstance(e, cadsr.DataElementConcept): + yield from self._obj_as_rows(e.ObjectClass, id) + yield from self._obj_as_rows(e.Property, id) + yield from self._obj_as_rows(e.ConceptualDomain, id) + elif isinstance(e, cadsr.ValueDomain): + for pv in e.PermissibleValues: + yield from self._obj_as_rows(pv.ValueMeaning, id) + if isinstance(e, (cadsr.ObjectClass, cadsr.Property, cadsr.PermissibleValue)): + for c in e.Concepts: + yield from self._obj_as_rows(c, id) + + + diff --git a/schema_automator/importers/jsonschema_import_engine.py b/schema_automator/importers/jsonschema_import_engine.py index de7cd89..661200d 100644 --- a/schema_automator/importers/jsonschema_import_engine.py +++ b/schema_automator/importers/jsonschema_import_engine.py @@ -5,30 +5,40 @@ import click import yaml import logging -from copy import copy -from typing import Any, Tuple, Dict, Union, List, Optional +from typing import Any, Tuple, Dict, List, Optional -from deprecation import deprecated from linkml.utils.schema_builder import SchemaBuilder -from linkml_runtime.linkml_model import SchemaDefinition, Element, ClassDefinition, \ +from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, \ SlotDefinition, EnumDefinition, \ - ClassDefinitionName, \ - SlotDefinitionName, Prefix + ClassDefinitionName, Prefix from linkml_runtime.linkml_model.meta import ReachabilityQuery, AnonymousEnumExpression from linkml_runtime.utils.formatutils import underscore, camelcase from schema_automator.importers.import_engine import ImportEngine -from schema_automator.utils.schemautils import minify_schema, write_schema +from schema_automator.utils.schemautils import write_schema # TODO: move to core. https://github.com/linkml/linkml/issues/104 RESERVED = ['in', 'not', 'def'] + +def json_schema_from_open_api(oa: Dict) -> Dict: + """ + Convert an OpenAPI schema to a JSON-Schema schema + + :param oa: + :return: + """ + schemas = oa.get('components', {}).get('schemas', {}) + schema = {'$defs': schemas} + return schema + @dataclass class JsonSchemaImportEngine(ImportEngine): """ A :ref:`ImportEngine` that imports a JSON-Schema representation to a LinkML Schema """ use_attributes: bool = False + is_openapi: bool = False def convert(self, input: str, name=None, format = 'json', **kwargs) -> SchemaDefinition: """ @@ -111,6 +121,8 @@ def load(self, input: str, name=None, format = 'json', **kwargs): return self.convert(input, name=name, format=format, **kwargs) def loads(self, obj: Any, name=None, **kwargs) -> SchemaDefinition: + if self.is_openapi: + obj = json_schema_from_open_api(obj) return self.translate_schema(obj, name, **kwargs) def _class_name(self, cn: str) -> str: diff --git a/schema_automator/importers/kwalify_import_engine.py b/schema_automator/importers/kwalify_import_engine.py new file mode 100644 index 0000000..08956cb --- /dev/null +++ b/schema_automator/importers/kwalify_import_engine.py @@ -0,0 +1,109 @@ +from typing import Union, Dict, Tuple, List, Any, Optional + +from dataclasses import dataclass + +import yaml +from linkml.utils.schema_builder import SchemaBuilder +from linkml_runtime.linkml_model.meta import SchemaDefinition, SlotDefinition, EnumDefinition, \ + PermissibleValue, UniqueKey, ClassDefinition +from linkml_runtime.utils.formatutils import camelcase + +from schema_automator.importers.import_engine import ImportEngine +import schema_automator.metamodels.frictionless as fl + + +# maps from kwalify to linkml +TYPE_MAPPING = { + "str": "string", + "int": "integer", + "float": "float", + "bool": "boolean", + "timestamp": "datetime", +} + + + +@dataclass +class KwalifyImportEngine(ImportEngine): + """ + An ImportEngine that imports Kwalify schemas + """ + + def convert(self, file: str, id: str=None, name: str=None, class_name: str=None, **kwargs) -> SchemaDefinition: + """ + Converts one or more Kwalify files into a Schema + + :param files: + :param kwargs: + :return: + """ + sb = SchemaBuilder() + schema = sb.schema + if id: + schema.id = id + if not name: + name = "example" + if name: + schema.name = name + kwalify = yaml.safe_load(open(file)) + if kwalify["type"] != "map": + raise ValueError(f"Expected map, got {kwalify['type']}") + if class_name is None: + class_name = camelcase(name) + self.convert_to_class(sb, kwalify["mapping"], class_name) + sb.add_defaults() + if name: + schema.default_prefix = name + return sb.schema + + def convert_to_class(self, sb: SchemaBuilder, kwalify_map: Dict[str, Any], name: str): + """ + Convert a Kwalify map to a class + + :param sb: + :param kwalify: + :param name: + :return: + """ + cls = ClassDefinition(name=name) + sb.schema.classes[name] = cls + for slot_name, v in kwalify_map.items(): + if isinstance(v, list): + if len(v) != 1: + raise ValueError(f"Expected single element in list, got {v}") + v = v[0] + slot = SlotDefinition(name=slot_name, required=v.get('required', False)) + pattern = v.get('pattern', None) + if pattern: + # remove outer /..../ + slot.pattern = pattern[1:-1] + + typ = v['type'] + if typ == 'seq': + slot.multivalued = True + seq = v['sequence'] + if len(seq) != 1: + raise ValueError(f"Expected single element in sequence, got {seq}") + v = seq[0] + typ = v['type'] + if typ == 'map': + range_cls_name = camelcase(slot_name) + self.convert_to_class(sb, v["mapping"], range_cls_name) + slot.range = range_cls_name + elif typ == 'seq': + raise NotImplementedError("Sequences of sequences not supported") + else: + slot.range = TYPE_MAPPING.get(typ, "string") + pvs = v.get('enum', None) + if pvs: + enum_name = f"{name}_{slot_name}_enum" + sb.add_enum(EnumDefinition(name=enum_name, permissible_values=pvs)) + slot.range = enum_name + cls.attributes[slot_name] = slot + + + + + + + diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index a51c5a5..3abc4cb 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -1,7 +1,5 @@ -import click import logging -import yaml -from typing import Union, Dict, Tuple, List, Any +from typing import Dict, List, Any from collections import defaultdict from linkml.utils.schema_builder import SchemaBuilder @@ -16,6 +14,7 @@ from dataclasses import dataclass, field +from linkml_runtime.utils.formatutils import underscore from linkml_runtime.utils.introspection import package_schemaview from rdflib import Graph, RDF, OWL, URIRef, RDFS, SKOS, SDO, Namespace from schema_automator.importers.import_engine import ImportEngine @@ -66,9 +65,12 @@ def __post_init__(self): self.reverse_metamodel_mappings[v].append(k) if self.initial_metamodel_mappings: for k, vs in self.initial_metamodel_mappings.items(): + if not isinstance(vs, list): + vs = [vs] self.metamodel_mappings[k].extend(vs) for v in vs: - self.reverse_metamodel_mappings[v].append(k) + self.reverse_metamodel_mappings[URIRef(v)].append(k) + logging.info(f"Adding mapping {k} -> {v}") for e in sv.all_elements().values(): mappings = [] for ms in sv.get_mappings(e.name, expand=True).values(): @@ -185,6 +187,7 @@ def _dict_for_subject(self, g: Graph, s: URIRef) -> Dict[str, Any]: if pp == RDF.type: continue metaslot_name = self._element_from_iri(pp) + logging.debug(f"Mapping {pp} -> {metaslot_name}") if metaslot_name not in self.defclass_slots: continue if metaslot_name is None: @@ -192,14 +195,15 @@ def _dict_for_subject(self, g: Graph, s: URIRef) -> Dict[str, Any]: continue if metaslot_name == "name": metaslot_name = "title" - v = self._object_to_value(obj) metaslot = self.metamodel.get_slot(metaslot_name) + v = self._object_to_value(obj, metaslot=metaslot) + metaslot_name_safe = underscore(metaslot_name) if not metaslot or metaslot.multivalued: - if metaslot_name not in init_dict: - init_dict[metaslot_name] = [] - init_dict[metaslot_name].append(v) + if metaslot_name_safe not in init_dict: + init_dict[metaslot_name_safe] = [] + init_dict[metaslot_name_safe].append(v) else: - init_dict[metaslot_name] = v + init_dict[metaslot_name_safe] = v return init_dict def _rdfs_metamodel_iri(self, name: str) -> List[URIRef]: @@ -209,11 +213,13 @@ def _element_from_iri(self, iri: URIRef) -> str: r = self.reverse_metamodel_mappings.get(iri, []) if len(r) > 0: if len(r) > 1: - logging.info(f"Multiple mappings for {iri}: {r}") + logging.debug(f"Multiple mappings for {iri}: {r}") return r[0] - def _object_to_value(self, obj: Any) -> Any: + def _object_to_value(self, obj: Any, metaslot: SlotDefinition = None) -> Any: if isinstance(obj, URIRef): + if metaslot.range == "uriorcurie" or metaslot.range == "uri": + return str(obj) return self.iri_to_name(obj) if isinstance(obj, Literal): return obj.value diff --git a/tests/resources/cadsr-cde-217609.json b/tests/resources/cadsr-cde-217609.json deleted file mode 100644 index e69de29..0000000 diff --git a/tests/resources/cadsr-cde-996.json b/tests/resources/cadsr-cde-996.json index 98087cb..af15bd5 100644 --- a/tests/resources/cadsr-cde-996.json +++ b/tests/resources/cadsr-cde-996.json @@ -1 +1,741 @@ -{"DataElement":{"publicId":"996","version":"5","preferredName":"Prior Chemotherapy Administered End Date","preferredDefinition":"the end date for previous chemotherapy administered as treatment for this cancer.","longName":"PRIOR_CT_ADM_END_DT","context":"CTEP","contextVersion":"2.31","DataElementConcept":{"publicId":"2188711","version":"1","preferredName":"Prior Chemotherapy Administered","preferredDefinition":"information related to prior administration of chemotherapy.","longName":"PRIOR_CT_ADM","context":"CTEP","contextVersion":"2.31","ObjectClass":{"publicId":"2206391","version":"1","preferredName":"Prior Chemotherapy","preferredDefinition":"Earlier in time or order.:The use of synthetic or naturally-occurring chemicals for the treatment of diseases. Although this term may be used to describe any therapy involving the use of chemical-based agents, it is most commonly used to refer to the variety of chemical-based agents employed to treat cancer. Cancer chemotherapy works by arresting or killing the growth and spread of cancer cells. Because cancer cells usually divide much faster than normal cells, they are often very sensitive to the inhibitory actions of chemotherapeutic agents. Chemotherapy may also include agents that enhance immune function or alter hormonal activity. (NCI04)","longName":"C25629:C15632","context":"NCIP","contextVersion":"1","Concepts":[{"longName":"Prior","conceptCode":"C25629","definition":"Earlier in time or order.","evsSource":"NCI_CONCEPT_CODE","primaryIndicator":"No","displayOrder":"1"},{"longName":"Chemotherapy","conceptCode":"C15632","definition":"The use of synthetic or naturally-occurring chemicals for the treatment of 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(NCI).","longName":"TX","context":"CTEP","contextVersion":"2.31","origin":null,"workflowStatus":"RELEASED","registrationStatus":"Application","id":"B214D04D-9F05-1CA5-E034-0003BA12F5E7","latestVersionIndicator":"Yes","beginDate":"2002-12-18","endDate":null,"createdBy":"MSUPLEY","dateCreated":"2002-12-18","modifiedBy":"SBR","dateModified":"2003-10-29","changeDescription":null,"administrativeNotes":null,"unresolvedIssues":null,"deletedIndicator":"No"},"origin":null,"workflowStatus":"RELEASED","registrationStatus":"Application","id":"E54DEB21-FF53-61DD-E034-0003BA3F9857","latestVersionIndicator":"Yes","beginDate":"2004-09-30","endDate":null,"createdBy":"CAMPBELB","dateCreated":"2004-09-30","modifiedBy":"SBR","dateModified":"2016-06-06","changeDescription":null,"administrativeNotes":null,"unresolvedIssues":null,"deletedIndicator":"No"},"ValueDomain":{"publicId":"2188674","version":"1","preferredName":"End Date","preferredDefinition":"The date on which an observation or an event 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"context": "CTEP" + }, + { + "name": "0002464", + "type": "HISTORICAL_CDE_ID", + "context": "CTEP" + }, + { + "name": "0065215", + "type": "HISTORICAL_CDE_ID", + "context": "CTEP" + }, + { + "name": "PRIOR_CT_ADM_END_DT", + "type": "USED_BY", + "context": "CTEP" + }, + { + "name": "ABTC", + "type": "USED_BY", + "context": "ABTC" + }, + { + "name": "COG", + "type": "USED_BY", + "context": "COG" + }, + { + "name": "PRIOR_CT_ADM_END_DT", + "type": "USED_BY", + "context": "COG" + }, + { + "name": "PRIOR_CT_ADM_END_DT", + "type": "USED_BY", + "context": "Alliance" + }, + { + "name": "PRIOR_CT_ADM_END_DT", + "type": "USED_BY", + "context": "NRG" + }, + { + "name": "ECOG-ACRIN", + "type": "USED_BY", + "context": "ECOG-ACRIN" + }, + { + "name": "CMSTDAT_PRICHEMO", + "type": "OID, Alliance", + "context": "Alliance" + } + ], + "ReferenceDocuments": [ + { + "name": "Date Prior Chemotherapy Ended", + "type": "Preferred Question Text", + "description": "Date Prior Chemotherapy Ended", + "url": null, + "context": "CTEP" + }, + { + "name": "CRF Text", + "type": "Alternate Question Text", + "description": "Prior Chemotherapy End Date", + "url": null, + "context": "CTEP" + }, + { + "name": "Prior Chemotherapy Stop Date", + "type": "Alternate Question Text", + "description": "Prior Chemotherapy Stop Date", + "url": null, + "context": "CTEP" + }, + { + "name": "COG_CRF_TEXT_1", + "type": "Alternate Question Text", + "description": "Date of last dose of indicated agent", + "url": null, + "context": "CTEP" + }, + { + "name": "CRF Text2", + "type": "Alternate Question Text", + "description": "Last day of chemotherapy", + "url": null, + "context": "CTEP" + }, + { + "name": "CRF Text 1", + "type": "Alternate Question Text", + "description": "Date Ended", + "url": null, + "context": "CTEP" + }, + { + "name": "CRF Text3", + "type": "Alternate Question Text", + "description": "Date last chemotherapy treatment received", + "url": null, + "context": "CTEP" + }, + { + "name": "CRF Text4", + "type": "Alternate Question Text", + "description": "Date of completion of prior chemotherapy", + "url": null, + "context": "CTEP" + }, + { + "name": "COG_CRF_TEXT_2", + "type": "Alternate Question Text", + "description": "Date last Myelosuppressive Chemotherapy treatment received", + "url": null, + "context": "COG" + }, + { + "name": "ECOG CRF Text 1", + "type": "Alternate Question Text", + "description": "Date of last prior chemotherapy", + "url": null, + "context": "ECOG-ACRIN" + }, + { + "name": "ECOG CRF Text 2", + "type": "Alternate Question Text", + "description": "Date prior anthracycline therapy ended", + "url": null, + "context": "ECOG-ACRIN" + }, + { + "name": "ECOG CRF Text 3", + "type": "Alternate Question Text", + "description": "Date prior systemic doxorubicin ended", + "url": null, + "context": "ECOG-ACRIN" + }, + { + "name": "ECOG CRF Text 4", + "type": "Alternate Question Text", + "description": "Date prior Brentuximab ended", + "url": null, + "context": "ECOG-ACRIN" + }, + { + "name": "NRG_CRF_Text 1", + "type": "Alternate Question Text", + "description": "Date Prior Systemic Therapy Ended", + "url": null, + "context": "NRG" + }, + { + "name": "CRF Text5", + "type": "Alternate Question Text", + "description": "last date of chemotherapy", + "url": null, + "context": "Alliance" + }, + { + "name": "Prior Therapies Form", + "type": "Alternate Question Text", + "description": "Date (most recent) prior chemotherapy ended", + "url": null, + "context": "ECOG-ACRIN" + }, + { + "name": "CRF Text6", + "type": "Alternate Question Text", + "description": "last day of chemotherapy", + "url": null, + "context": "Alliance" + }, + { + "name": "CRF Text7", + "type": "Alternate Question Text", + "description": "last day of neoadjuvant chemotherapy", + "url": null, + "context": "Alliance" + }, + { + "name": "CRF Text8", + "type": "Alternate Question Text", + "description": "date of last chemotherapy", + "url": null, + "context": "Alliance" + }, + { + "name": "CRF Text9", + "type": "Alternate Question Text", + "description": "Chemotherapy Completion Date", + "url": null, + "context": "Alliance" + }, + { + "name": "Alliance A092105", + "type": "Alternate Question Text", + "description": "If Yes, Chemotherapy Completion Date", + "url": null, + "context": "Alliance" + } + ], + "origin": null, + "workflowStatus": "RELEASED", + "registrationStatus": "Qualified", + "id": "E55143E8-160F-321B-E034-0003BA3F9857", + "latestVersionIndicator": "Yes", + "beginDate": "2004-09-30", + "endDate": null, + "createdBy": "CAMPBELB", + "dateCreated": "2004-09-30", + "modifiedBy": "ZHWENDY", + "dateModified": "2023-04-06", + "changeDescription": "ISO compliance.", + "administrativeNotes": "2023/4/4: Added AQT for Alliance.wz", + "unresolvedIssues": null, + "deletedIndicator": "No" + } +} diff --git a/tests/resources/cadsr-swagger.json b/tests/resources/cadsr-swagger.json index 8053b9d..b4966f1 100644 --- a/tests/resources/cadsr-swagger.json +++ b/tests/resources/cadsr-swagger.json @@ -1,1436 +1,1570 @@ { - "swagger" : "2.0", - "info" : { - "description" : "API for caDSR object structures.", - "version" : "1.0", - "title" : "NCI API" + "swagger": "2.0", + "info": { + "description": "API for caDSR object structures.", + "version": "1.0", + "title": "NCI API" }, - "host" : "cadsrapi.cancer.gov", - "basePath" : "/rad/NCIAPI/1.0/api", - "tags" : [ { - "name" : "Data Element", - "description" : "A unit of data for which the definition, identification, representation and permissible values are specified by means of a set of attributes." - } ], - "schemes" : [ "https" ], - "consumes" : [ "application/json" ], - "produces" : [ "application/json", "application/xml" ], - "paths" : { - "/DataElement/{publicId}" : { - "get" : { - "tags" : [ "Data Element" ], - "description" : "GET full representation of Data Element object including all of it's lower level objects such as Value Domain, Data Element Concept, and Classifications, Reference Documents including Question Texts.\r\n\r\nExamples:\r\n\r\n- To get the latest version of Data Element with publicID of 62:\r\n /DataElement/62\r\n\r\n\r\n- To get specific version (e.g. version 4) of Data Element with publicId of 62:\r\n /DataElement/62?version=4", - "operationId" : "DataElementpublicId_GET_1", - "parameters" : [ { - "name" : "publicId", - "in" : "path", - "description" : "The unique identifier for an Administered Item within a Registration Authority. Example: 62", - "required" : true, - "type" : "string" - }, { - "name" : "version", - "in" : "query", - "description" : "The unique version identifier of the Administered Item.", - "required" : false, - "type" : "string" - } ], - "responses" : { - "200" : { - "description" : "OK", - "schema" : { - "$ref" : "#/definitions/DataElementpublicId_GET_response" + "host": "cadsrapi.cancer.gov", + "basePath": "/rad/NCIAPI/1.0/api", + "tags": [ + { + "name": "Data Element", + "description": "A unit of data for which the definition, identification, representation and permissible values are specified by means of a set of attributes." + } + ], + "schemes": [ + "https" + ], + "consumes": [ + "application/json" + ], + "produces": [ + "application/json", + "application/xml" + ], + "paths": { + "/DataElement/{publicId}": { + "get": { + "tags": [ + "Data Element" + ], + "description": "GET full representation of Data Element object including all of it's lower level objects such as Value Domain, Data Element Concept, and Classifications, Reference Documents including Question Texts.\r\n\r\nExamples:\r\n\r\n- To get the latest version of Data Element with publicID of 62:\r\n /DataElement/62\r\n\r\n\r\n- To get specific version (e.g. version 4) of Data Element with publicId of 62:\r\n /DataElement/62?version=4", + "operationId": "DataElementpublicId_GET_1", + "parameters": [ + { + "name": "publicId", + "in": "path", + "description": "The unique identifier for an Administered Item within a Registration Authority. Example: 62", + "required": true, + "type": "string" + }, + { + "name": "version", + "in": "query", + "description": "The unique version identifier of the Administered Item.", + "required": false, + "type": "string" + } + ], + "responses": { + "200": { + "description": "OK", + "schema": { + "$ref": "#/definitions/DataElementpublicId_GET_response" } }, - "401" : { - "description" : "Access Denied" + "401": { + "description": "Access Denied" } } } }, - "/DataElement/query" : { - "get" : { - "tags" : [ "Data Element" ], - "description" : "GET list of Data Element objects with top level properties ONLY. \r\n\r\nExamples:\r\n\r\n- To get all versions of Data Element with publicID of 62:\r\n /DataElement?publicId=62", - "operationId" : "DataElementquery_GET_2", - "consumes" : [ "application/json" ], - "produces" : [ "application/json", "application/xml" ], - "parameters" : [ { - "name" : "publicId", - "in" : "query", - "description" : "The unique identifier for an Administered Item within a Registration Authority. Example: 62", - "required" : false, - "type" : "string" - } ], - "responses" : { - "200" : { - "description" : "OK", - "schema" : { - "$ref" : "#/definitions/DataElementquery_GET_response" + "/DataElement/query": { + "get": { + "tags": [ + "Data Element" + ], + "description": "GET list of Data Element objects with top level properties ONLY. \r\n\r\nExamples:\r\n\r\n- To get all versions of Data Element with publicID of 62:\r\n /DataElement?publicId=62", + "operationId": "DataElementquery_GET_2", + "consumes": [ + "application/json" + ], + "produces": [ + "application/json", + "application/xml" + ], + "parameters": [ + { + "name": "publicId", + "in": "query", + "description": "The unique identifier for an Administered Item within a Registration Authority. Example: 62", + "required": false, + "type": "string" + } + ], + "responses": { + "200": { + "description": "OK", + "schema": { + "$ref": "#/definitions/DataElementquery_GET_response" } }, - "401" : { - "description" : "Access Denied" + "401": { + "description": "Access Denied" } } } }, - "/DataElement/query/Concept" : { - "get" : { - "tags" : [ "Data Element" ], - "description" : "Search for Data Element objects by Concept fields. User may search by either Concept Name (conceptLongName) or Concept Code (conceptCode). \r\n
\r\nConcept search may also utilize the exactMatch flag. For example if \"Gender\" is the search term and exactMatch is set to false, the search will return wildcard concept names that CONTAIN \"*Gender*\". If exactMatch is set to true the search will return concept names that ONLY match \"Gender\". The same rules apply to conceptCode as well.\r\n
\r\nConcept searches are not case sensitive. For example, search terms \"Gender\" and \"geNdEr\" will return the same results.\r\n
\r\nThe user may also \"filter\" the initial results by fields such as Primary Indicator, Order, Status, etc. At a minimum, either conceptLongName or conceptCode must be provided in the search query or no results will be returned. \r\n
\r\nThe maximum number of results per query is 1000. Please refine your search to bring back fewer results.", - "operationId" : "DataElementqueryConcept_GET_3", - "parameters" : [ { - "name" : "conceptLongName", - "in" : "query", - "description" : "A name by which an Administered Item (e.g. Concept) is designated within a specific Context. Example: \"Gender\".", - "required" : false, - "type" : "string" - }, { - "name" : "conceptCode", - "in" : "query", - "description" : "A code by which a Concept is designated. An example code would be \"C17357\".", - "required" : false, - "type" : "string" - }, { - "name" : "exactMatch", - "in" : "query", - "description" : "A flag to indicate the search term should look for an exact match. The default value is \"false\".", - "required" : false, - "type" : "string" - }, { - "name" : "conceptPrimaryIndicatorFilter", - "in" : "query", - "description" : "Filter results on the Primary Indicator field. Examples are 1 for true, 0 for false. If no value is specified, all results will be returned.", - "required" : false, - "type" : "string" - }, { - "name" : "conceptDisplayOrderFilter", - "in" : "query", - "description" : "Filter results on the Display Order field. Examples are ordered values 0, 1, 2, etc. If no value is specified, all results will be returned.", - "required" : false, - "type" : "string" - }, { - "name" : "itemTypeFilter", - "in" : "query", - "description" : "Filter results returning only the parent objects the Concept is attributed to. Examples are \"Object Class\", \"Property\", \"Value Meaning\" or \"Representation Term\". If no value is specified, all results will be returned.", - "required" : false, - "type" : "string" - }, { - "name" : "workflowStatusFilter", - "in" : "query", - "description" : "Filter results on the Workflow Status of the Data Element. Example is \"RELEASED\". If no value is specified, all results will be returned.", - "required" : false, - "type" : "string" - } ], - "responses" : { - "200" : { - "description" : "OK", - "schema" : { - "$ref" : "#/definitions/DataElementqueryConcept_GET_response" + "/DataElement/query/Concept": { + "get": { + "tags": [ + "Data Element" + ], + "description": "Search for Data Element objects by Concept fields. User may search by either Concept Name (conceptLongName) or Concept Code (conceptCode). \r\n
\r\nConcept search may also utilize the exactMatch flag. For example if \"Gender\" is the search term and exactMatch is set to false, the search will return wildcard concept names that CONTAIN \"*Gender*\". If exactMatch is set to true the search will return concept names that ONLY match \"Gender\". The same rules apply to conceptCode as well.\r\n
\r\nConcept searches are not case sensitive. For example, search terms \"Gender\" and \"geNdEr\" will return the same results.\r\n
\r\nThe user may also \"filter\" the initial results by fields such as Primary Indicator, Order, Status, etc. At a minimum, either conceptLongName or conceptCode must be provided in the search query or no results will be returned. \r\n
\r\nThe maximum number of results per query is 1000. Please refine your search to bring back fewer results.", + "operationId": "DataElementqueryConcept_GET_3", + "parameters": [ + { + "name": "conceptLongName", + "in": "query", + "description": "A name by which an Administered Item (e.g. Concept) is designated within a specific Context. Example: \"Gender\".", + "required": false, + "type": "string" + }, + { + "name": "conceptCode", + "in": "query", + "description": "A code by which a Concept is designated. An example code would be \"C17357\".", + "required": false, + "type": "string" + }, + { + "name": "exactMatch", + "in": "query", + "description": "A flag to indicate the search term should look for an exact match. The default value is \"false\".", + "required": false, + "type": "string" + }, + { + "name": "conceptPrimaryIndicatorFilter", + "in": "query", + "description": "Filter results on the Primary Indicator field. Examples are 1 for true, 0 for false. If no value is specified, all results will be returned.", + "required": false, + "type": "string" + }, + { + "name": "conceptDisplayOrderFilter", + "in": "query", + "description": "Filter results on the Display Order field. Examples are ordered values 0, 1, 2, etc. If no value is specified, all results will be returned.", + "required": false, + "type": "string" + }, + { + "name": "itemTypeFilter", + "in": "query", + "description": "Filter results returning only the parent objects the Concept is attributed to. Examples are \"Object Class\", \"Property\", \"Value Meaning\" or \"Representation Term\". If no value is specified, all results will be returned.", + "required": false, + "type": "string" + }, + { + "name": "workflowStatusFilter", + "in": "query", + "description": "Filter results on the Workflow Status of the Data Element. Example is \"RELEASED\". If no value is specified, all results will be returned.", + "required": false, + "type": "string" + } + ], + "responses": { + "200": { + "description": "OK", + "schema": { + "$ref": "#/definitions/DataElementqueryConcept_GET_response" } }, - "401" : { - "description" : "Access Denied" + "401": { + "description": "Access Denied" } } } }, - "/DataElement/getCRDCList" : { - "get" : { - "tags" : [ "Data Element" ], - "description" : "GET full representation of CRDC Data Elements.\r\n\r\nThere are no input parameters.", - "operationId" : "DataElementgetCRDCList_GET_4", - "parameters" : [ ], - "responses" : { - "200" : { - "description" : "OK", - "schema" : { - "$ref" : "#/definitions/DataElementgetCRDCList_GET_response" + "/DataElement/getCRDCList": { + "get": { + "tags": [ + "Data Element" + ], + "description": "GET full representation of CRDC Data Elements.\r\n\r\nThere are no input parameters.", + "operationId": "DataElementgetCRDCList_GET_4", + "parameters": [], + "responses": { + "200": { + "description": "OK", + "schema": { + "$ref": "#/definitions/DataElementgetCRDCList_GET_response" } }, - "401" : { - "description" : "Access Denied" + "401": { + "description": "Access Denied" } } } }, - "/DataElement/query/Context" : { - "get" : { - "tags" : [ "Data Element" ], - "description" : "GET list of Data Element objects by Context name with top level properties.\r\n\r\nExamples:\r\n\r\n- To get all versions of Data Element with context: NCI Standards\r\n /DataElement?contextName=NCI Standards", - "operationId" : "DataElementqueryContext_GET_5", - "parameters" : [ { - "name" : "contextName", - "in" : "query", - "description" : "The name of a Context object. Example: NCI Standards", - "required" : false, - "type" : "string" - } ], - "responses" : { - "200" : { - "description" : "OK", - "schema" : { - "$ref" : "#/definitions/DataElementqueryContext_GET_response" + "/DataElement/query/Context": { + "get": { + "tags": [ + "Data Element" + ], + "description": "GET list of Data Element objects by Context name with top level properties.\r\n\r\nExamples:\r\n\r\n- To get all versions of Data Element with context: NCI Standards\r\n /DataElement?contextName=NCI Standards", + "operationId": "DataElementqueryContext_GET_5", + "parameters": [ + { + "name": "contextName", + "in": "query", + "description": "The name of a Context object. Example: NCI Standards", + "required": false, + "type": "string" + } + ], + "responses": { + "200": { + "description": "OK", + "schema": { + "$ref": "#/definitions/DataElementqueryContext_GET_response" } }, - "401" : { - "description" : "Access Denied" + "401": { + "description": "Access Denied" } } } } }, - "definitions" : { - "ClassificationScheme" : { - "required" : [ "context", "longName", "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string" - }, - "longName" : { - "type" : "string" - }, - "context" : { - "type" : "string" - }, - "ClassificationSchemeItems" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/ClassificationSchemeItem" + "definitions": { + "ClassificationScheme": { + "required": [ + "context", + "longName", + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string" + }, + "longName": { + "type": "string" + }, + "context": { + "type": "string" + }, + "ClassificationSchemeItems": { + "type": "array", + "items": { + "$ref": "#/definitions/ClassificationSchemeItem" } } } }, - "Property" : { - "required" : [ "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "context" : { - "type" : "string", - "description" : "An associated gov.nih.nci.cadsr.domain.Context object" - }, - "contextVersion" : { - "type" : "string" - }, - "Concepts" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/Concept" + "Property": { + "required": [ + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "context": { + "type": "string", + "description": "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion": { + "type": "string" + }, + "Concepts": { + "type": "array", + "items": { + "$ref": "#/definitions/Concept" } }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" }, - "changeDescription" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + "changeDescription": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." }, - "administrativeNotes" : { - "type" : "string" + "administrativeNotes": { + "type": "string" }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "DataElementpublicId_GET_response" : { - "required" : [ "DataElement" ], - "properties" : { - "DataElement" : { - "$ref" : "#/definitions/DataElement" + "DataElementpublicId_GET_response": { + "required": [ + "DataElement" + ], + "properties": { + "DataElement": { + "$ref": "#/definitions/DataElement" } } }, - "DataElementgetCRDCList_GET_response" : { - "required" : [ "CRDCDataElements" ], - "properties" : { - "CRDCDataElements" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/CRDCDataElement" + "DataElementgetCRDCList_GET_response": { + "required": [ + "CRDCDataElements" + ], + "properties": { + "CRDCDataElements": { + "type": "array", + "items": { + "$ref": "#/definitions/CRDCDataElement" } } } }, - "DataElementqueryContext_GET_response" : { - "required" : [ "DataElementQueryResults", "numRecords" ], - "properties" : { - "numRecords" : { - "type" : "string" - }, - "DataElementQueryResults" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/DataElementQuery" + "DataElementqueryContext_GET_response": { + "required": [ + "DataElementQueryResults", + "numRecords" + ], + "properties": { + "numRecords": { + "type": "string" + }, + "DataElementQueryResults": { + "type": "array", + "items": { + "$ref": "#/definitions/DataElementQuery" } } } }, - "AlternateName" : { - "required" : [ "context", "name", "type" ], - "properties" : { - "name" : { - "type" : "string" - }, - "type" : { - "type" : "string" - }, - "context" : { - "type" : "string" + "AlternateName": { + "required": [ + "context", + "name", + "type" + ], + "properties": { + "name": { + "type": "string" + }, + "type": { + "type": "string" + }, + "context": { + "type": "string" } } }, - "CRDCDataElement" : { - "properties" : { - "CDE Public ID" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "Version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "CRDC Name" : { - "type" : "string", - "description" : "CRDC Name" - }, - "CRD Domain" : { - "type" : "string", - "description" : "CRDC Domain" - }, - "Example" : { - "type" : "string", - "description" : "CRDC Example" - }, - "VD Type" : { - "type" : "string", - "description" : "Value Domain type" - }, - "Coding Instruction" : { - "type" : "string", - "description" : "CRDC Coding Instructions" - }, - "Instructions" : { - "type" : "string", - "description" : "CRDC Instructions" - }, - "CRDC Definition" : { - "type" : "string", - "description" : "CRD Definition" - }, - "CDE Long Name" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "Registration Status" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." - }, - "Workflow Status" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." - }, - "Owned By" : { - "type" : "string", - "description" : "Who owns the Data Element" - }, - "Used By" : { - "type" : "string", - "description" : "Who is using the Data Element" - }, - "Deep Link" : { - "type" : "string" - }, - "permissibleValues" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/permissibleValue" + "CRDCDataElement": { + "properties": { + "CDE Public ID": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "Version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "CRDC Name": { + "type": "string", + "description": "CRDC Name" + }, + "CRD Domain": { + "type": "string", + "description": "CRDC Domain" + }, + "Example": { + "type": "string", + "description": "CRDC Example" + }, + "VD Type": { + "type": "string", + "description": "Value Domain type" + }, + "Coding Instruction": { + "type": "string", + "description": "CRDC Coding Instructions" + }, + "Instructions": { + "type": "string", + "description": "CRDC Instructions" + }, + "CRDC Definition": { + "type": "string", + "description": "CRD Definition" + }, + "CDE Long Name": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "Registration Status": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." + }, + "Workflow Status": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "Owned By": { + "type": "string", + "description": "Who owns the Data Element" + }, + "Used By": { + "type": "string", + "description": "Who is using the Data Element" + }, + "Deep Link": { + "type": "string" + }, + "permissibleValues": { + "type": "array", + "items": { + "$ref": "#/definitions/permissibleValue" } } } }, - "ConceptualDomain" : { - "required" : [ "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "context" : { - "type" : "string", - "description" : "An associated gov.nih.nci.cadsr.domain.Context object" - }, - "contextVersion" : { - "type" : "string" - }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." - }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." - }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." - }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." - }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." - }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." - }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." - }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." - }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." - }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" - }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" - }, - "changeDescription" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." - }, - "administrativeNotes" : { - "type" : "string" - }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." - }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "ConceptualDomain": { + "required": [ + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "context": { + "type": "string", + "description": "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion": { + "type": "string" + }, + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." + }, + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." + }, + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." + }, + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." + }, + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." + }, + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." + }, + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" + }, + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" + }, + "changeDescription": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes": { + "type": "string" + }, + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "ClassificationSchemeItem" : { - "required" : [ "context", "longName", "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string" - }, - "longName" : { - "type" : "string" - }, - "context" : { - "type" : "string" + "ClassificationSchemeItem": { + "required": [ + "context", + "longName", + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string" + }, + "longName": { + "type": "string" + }, + "context": { + "type": "string" } } }, - "DataElementqueryConcept_GET_response" : { - "required" : [ "DataElementQueryResults", "numRecords" ], - "properties" : { - "numRecords" : { - "type" : "string" - }, - "DataElementQueryResults" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/DataElementQuery" + "DataElementqueryConcept_GET_response": { + "required": [ + "DataElementQueryResults", + "numRecords" + ], + "properties": { + "numRecords": { + "type": "string" + }, + "DataElementQueryResults": { + "type": "array", + "items": { + "$ref": "#/definitions/DataElementQuery" } } } }, - "DataElement" : { - "required" : [ "AlternateNames", "ClassificationSchemes", "DataElementConcept", "ReferenceDocuments", "ValueDomain", "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "context" : { - "type" : "string", - "description" : "An associated gov.nih.nci.cadsr.domain.Context object" - }, - "contextVersion" : { - "type" : "string" - }, - "DataElementConcept" : { - "$ref" : "#/definitions/DataElementConcept" - }, - "ValueDomain" : { - "$ref" : "#/definitions/ValueDomain" - }, - "ClassificationSchemes" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/ClassificationScheme" + "DataElement": { + "required": [ + "AlternateNames", + "ClassificationSchemes", + "DataElementConcept", + "ReferenceDocuments", + "ValueDomain", + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "context": { + "type": "string", + "description": "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion": { + "type": "string" + }, + "DataElementConcept": { + "$ref": "#/definitions/DataElementConcept" + }, + "ValueDomain": { + "$ref": "#/definitions/ValueDomain" + }, + "ClassificationSchemes": { + "type": "array", + "items": { + "$ref": "#/definitions/ClassificationScheme" } }, - "AlternateNames" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/AlternateName" + "AlternateNames": { + "type": "array", + "items": { + "$ref": "#/definitions/AlternateName" } }, - "ReferenceDocuments" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/ReferenceDocument" + "ReferenceDocuments": { + "type": "array", + "items": { + "$ref": "#/definitions/ReferenceDocument" } }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" }, - "changeDescription" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + "changeDescription": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." }, - "administrativeNotes" : { - "type" : "string" + "administrativeNotes": { + "type": "string" }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "ValueDomain" : { - "required" : [ "ConceptualDomain", "PermissibleValues", "RepresentationTerm", "characterSet", "context", "contextVersion", "dataType", "decimalPlace", "format", "longName", "maxLength", "maxValue", "minLength", "minValue", "preferredDefinition", "preferredName", "publicId", "type", "unitOfMeasure", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "context" : { - "type" : "string", - "description" : "An associated gov.nih.nci.cadsr.domain.Context object" - }, - "contextVersion" : { - "type" : "string" - }, - "type" : { - "type" : "string" - }, - "dataType" : { - "type" : "string" - }, - "unitOfMeasure" : { - "type" : "string" - }, - "characterSet" : { - "type" : "string" - }, - "minLength" : { - "type" : "string" - }, - "maxLength" : { - "type" : "string" - }, - "minValue" : { - "type" : "string" - }, - "maxValue" : { - "type" : "string" - }, - "decimalPlace" : { - "type" : "string" - }, - "format" : { - "type" : "string" - }, - "PermissibleValues" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/PermissibleValue" + "ValueDomain": { + "required": [ + "ConceptualDomain", + "PermissibleValues", + "RepresentationTerm", + "characterSet", + "context", + "contextVersion", + "dataType", + "decimalPlace", + "format", + "longName", + "maxLength", + "maxValue", + "minLength", + "minValue", + "preferredDefinition", + "preferredName", + "publicId", + "type", + "unitOfMeasure", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "context": { + "type": "string", + "description": "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion": { + "type": "string" + }, + "type": { + "type": "string" + }, + "dataType": { + "type": "string" + }, + "unitOfMeasure": { + "type": "string" + }, + "characterSet": { + "type": "string" + }, + "minLength": { + "type": "string" + }, + "maxLength": { + "type": "string" + }, + "minValue": { + "type": "string" + }, + "maxValue": { + "type": "string" + }, + "decimalPlace": { + "type": "string" + }, + "format": { + "type": "string" + }, + "PermissibleValues": { + "type": "array", + "items": { + "$ref": "#/definitions/PermissibleValue" } }, - "ConceptualDomain" : { - "$ref" : "#/definitions/ConceptualDomain" + "ConceptualDomain": { + "$ref": "#/definitions/ConceptualDomain" }, - "RepresentationTerm" : { - "$ref" : "#/definitions/RepresentationTerm" + "RepresentationTerm": { + "$ref": "#/definitions/RepresentationTerm" }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" }, - "changeDescription" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + "changeDescription": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." }, - "administrativeNotes" : { - "type" : "string" + "administrativeNotes": { + "type": "string" }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "ObjectClass" : { - "required" : [ "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "context" : { - "type" : "string", - "description" : "An associated gov.nih.nci.cadsr.domain.Context object" - }, - "contextVersion" : { - "type" : "string" - }, - "Concepts" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/Concept" + "ObjectClass": { + "required": [ + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "context": { + "type": "string", + "description": "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion": { + "type": "string" + }, + "Concepts": { + "type": "array", + "items": { + "$ref": "#/definitions/Concept" } }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" }, - "changeDescription" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + "changeDescription": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." }, - "administrativeNotes" : { - "type" : "string" + "administrativeNotes": { + "type": "string" }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "DataElementquery_GET_response" : { - "required" : [ "DataElementQueryResults", "numRecords" ], - "properties" : { - "numRecords" : { - "type" : "string" - }, - "DataElementQueryResults" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/DataElementQuery" + "DataElementquery_GET_response": { + "required": [ + "DataElementQueryResults", + "numRecords" + ], + "properties": { + "numRecords": { + "type": "string" + }, + "DataElementQueryResults": { + "type": "array", + "items": { + "$ref": "#/definitions/DataElementQuery" } } } }, - "Concept" : { - "properties" : { - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." + "Concept": { + "properties": { + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." }, - "conceptCode" : { - "type" : "string" + "conceptCode": { + "type": "string" }, - "definition" : { - "type" : "string" + "definition": { + "type": "string" }, - "evsSource" : { - "type" : "string", - "description" : "The name of the EVS concept code that was the source for the concept identifier." + "evsSource": { + "type": "string", + "description": "The name of the EVS concept code that was the source for the concept identifier." }, - "primaryIndicator" : { - "type" : "string" + "primaryIndicator": { + "type": "string" }, - "displayOrder" : { - "type" : "string" + "displayOrder": { + "type": "string" } } }, - "DataElementConcept" : { - "required" : [ "ConceptualDomain", "ObjectClass", "Property", "context", "contextVersion", "longName", "preferredDefinition", "preferredName", "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "context" : { - "type" : "string", - "description" : "An associated gov.nih.nci.cadsr.domain.Context object" - }, - "contextVersion" : { - "type" : "string" - }, - "ObjectClass" : { - "$ref" : "#/definitions/ObjectClass" - }, - "Property" : { - "$ref" : "#/definitions/Property" - }, - "ConceptualDomain" : { - "$ref" : "#/definitions/ConceptualDomain" - }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." - }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." - }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." - }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." - }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." - }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." - }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." - }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." - }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." - }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" - }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" - }, - "changeDescription" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." - }, - "administrativeNotes" : { - "type" : "string" - }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." - }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "DataElementConcept": { + "required": [ + "ConceptualDomain", + "ObjectClass", + "Property", + "context", + "contextVersion", + "longName", + "preferredDefinition", + "preferredName", + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "context": { + "type": "string", + "description": "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion": { + "type": "string" + }, + "ObjectClass": { + "$ref": "#/definitions/ObjectClass" + }, + "Property": { + "$ref": "#/definitions/Property" + }, + "ConceptualDomain": { + "$ref": "#/definitions/ConceptualDomain" + }, + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." + }, + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." + }, + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." + }, + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." + }, + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." + }, + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." + }, + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" + }, + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" + }, + "changeDescription": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes": { + "type": "string" + }, + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "ValueMeaning" : { - "required" : [ "context", "contextVersion", "longName", "preferredDefinition", "preferredName", "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "context" : { - "type" : "string", - "description" : "An associated gov.nih.nci.cadsr.domain.Context object" - }, - "contextVersion" : { - "type" : "string" - }, - "Concepts" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/Concept" + "ValueMeaning": { + "required": [ + "context", + "contextVersion", + "longName", + "preferredDefinition", + "preferredName", + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "context": { + "type": "string", + "description": "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion": { + "type": "string" + }, + "Concepts": { + "type": "array", + "items": { + "$ref": "#/definitions/Concept" } }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" }, - "changeDescription" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + "changeDescription": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." }, - "administrativeNotes" : { - "type" : "string" + "administrativeNotes": { + "type": "string" }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "RepresentationTerm" : { - "required" : [ "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "context" : { - "type" : "string", - "description" : "An associated gov.nih.nci.cadsr.domain.Context object" - }, - "contextVersion" : { - "type" : "string" - }, - "Concepts" : { - "type" : "array", - "items" : { - "$ref" : "#/definitions/Concept" + "RepresentationTerm": { + "required": [ + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "context": { + "type": "string", + "description": "An associated gov.nih.nci.cadsr.domain.Context object" + }, + "contextVersion": { + "type": "string" + }, + "Concepts": { + "type": "array", + "items": { + "$ref": "#/definitions/Concept" } }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" }, - "changeDescription" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." + "changeDescription": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." }, - "administrativeNotes" : { - "type" : "string" + "administrativeNotes": { + "type": "string" }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "ReferenceDocument" : { - "properties" : { - "name" : { - "type" : "string" + "ReferenceDocument": { + "properties": { + "name": { + "type": "string" }, - "type" : { - "type" : "string" + "type": { + "type": "string" }, - "description" : { - "type" : "string" + "description": { + "type": "string" }, - "url" : { - "type" : "string" + "url": { + "type": "string" }, - "context" : { - "type" : "string" + "context": { + "type": "string" } } }, - "PermissibleValue" : { - "required" : [ "ValueMeaning", "publicId", "value", "valueDescription" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for a Permissible Value" - }, - "value" : { - "type" : "string", - "description" : "A representation of a Value Meaning in a specific Value Domain the actual Value." - }, - "valueDescription" : { - "type" : "string", - "description" : "The text of the most desirable meaning for Value" - }, - "ValueMeaning" : { - "$ref" : "#/definitions/ValueMeaning" - }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." - }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." - }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." - }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." - }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." - }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." - }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" - }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" - }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "PermissibleValue": { + "required": [ + "ValueMeaning", + "publicId", + "value", + "valueDescription" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for a Permissible Value" + }, + "value": { + "type": "string", + "description": "A representation of a Value Meaning in a specific Value Domain the actual Value." + }, + "valueDescription": { + "type": "string", + "description": "The text of the most desirable meaning for Value" + }, + "ValueMeaning": { + "$ref": "#/definitions/ValueMeaning" + }, + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." + }, + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." + }, + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." + }, + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." + }, + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." + }, + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." + }, + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" + }, + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" + }, + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "DataElementQuery" : { - "required" : [ "publicId", "version" ], - "properties" : { - "publicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "version" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "preferredName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context. Referred to as Short Name." - }, - "preferredDefinition" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "longName" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "contextName" : { - "type" : "string", - "description" : "A 30 character limit name by which an Administered Item is designated within a specific Context." - }, - "contextVersion" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "dataElementConceptPublicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "dataElementConceptVersion" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "valueDomainPublicId" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "valueDomainVersion" : { - "type" : "string", - "description" : "The unique version identifier of the Administered Item." - }, - "origin" : { - "type" : "string", - "description" : "The source (document, project, discipline or model) for the Administered Item." - }, - "workflowStatus" : { - "type" : "string", - "description" : "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." - }, - "registrationStatus" : { - "type" : "string", - "description" : "A designation of the status in the registration life-cycle of an Administered Item." - }, - "id" : { - "type" : "string", - "description" : "The 36 character caDSR database identifier." - }, - "latestVersionIndicator" : { - "type" : "string", - "description" : "The present form of an Administered Item." - }, - "beginDate" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." - }, - "endDate" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." - }, - "createdBy" : { - "type" : "string", - "description" : "This is a description of createdBy." - }, - "dateCreated" : { - "type" : "string", - "description" : "The date the Administered Item was created." - }, - "modifiedBy" : { - "type" : "string", - "description" : "Username of the person who modified the record" - }, - "dateModified" : { - "type" : "string", - "description" : "Date on which the record was modified; last date the object was modified" - }, - "changeNote" : { - "type" : "string", - "description" : "The description of what has changed in the Administered Item since the prior version of the Administered Item." - }, - "administrativeNotes" : { - "type" : "string" - }, - "unresolvedIssues" : { - "type" : "string", - "description" : "Any problem that remains unresolved regarding proper documentation of the Administered Item." - }, - "deletedIndicator" : { - "type" : "string", - "description" : "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." + "DataElementQuery": { + "required": [ + "publicId", + "version" + ], + "properties": { + "publicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "version": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "preferredName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context. Referred to as Short Name." + }, + "preferredDefinition": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "longName": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "contextName": { + "type": "string", + "description": "A 30 character limit name by which an Administered Item is designated within a specific Context." + }, + "contextVersion": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "dataElementConceptPublicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "dataElementConceptVersion": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "valueDomainPublicId": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "valueDomainVersion": { + "type": "string", + "description": "The unique version identifier of the Administered Item." + }, + "origin": { + "type": "string", + "description": "The source (document, project, discipline or model) for the Administered Item." + }, + "workflowStatus": { + "type": "string", + "description": "A name of a designation of the status in the administrative life-cycle of a Context Owner for handling new administered items." + }, + "registrationStatus": { + "type": "string", + "description": "A designation of the status in the registration life-cycle of an Administered Item." + }, + "id": { + "type": "string", + "description": "The 36 character caDSR database identifier." + }, + "latestVersionIndicator": { + "type": "string", + "description": "The present form of an Administered Item." + }, + "beginDate": { + "type": "string", + "description": "The particular day, month and year this item became allowed." + }, + "endDate": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." + }, + "createdBy": { + "type": "string", + "description": "This is a description of createdBy." + }, + "dateCreated": { + "type": "string", + "description": "The date the Administered Item was created." + }, + "modifiedBy": { + "type": "string", + "description": "Username of the person who modified the record" + }, + "dateModified": { + "type": "string", + "description": "Date on which the record was modified; last date the object was modified" + }, + "changeNote": { + "type": "string", + "description": "The description of what has changed in the Administered Item since the prior version of the Administered Item." + }, + "administrativeNotes": { + "type": "string" + }, + "unresolvedIssues": { + "type": "string", + "description": "Any problem that remains unresolved regarding proper documentation of the Administered Item." + }, + "deletedIndicator": { + "type": "string", + "description": "An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists." } } }, - "permissibleValue" : { - "properties" : { - "Permissible Value" : { - "type" : "string", - "description" : "A representation of a Value Meaning in a specific Value Domain the actual Value." - }, - "VM Long Name" : { - "type" : "string", - "description" : "A 255 character limit name for an item in the registry." - }, - "VM Public ID" : { - "type" : "string", - "description" : "The unique identifier for an Administered Item within a Registration Authority." - }, - "Concept Code" : { - "type" : "string" - }, - "VM Description" : { - "type" : "string", - "description" : "The text of the most desirable meaning for the Administered Item." - }, - "Begin Date" : { - "type" : "string", - "description" : "The particular day, month and year this item became allowed." - }, - "End Date" : { - "type" : "string", - "description" : "The day, month and year this item becomes no longer allowed." + "permissibleValue": { + "properties": { + "Permissible Value": { + "type": "string", + "description": "A representation of a Value Meaning in a specific Value Domain the actual Value." + }, + "VM Long Name": { + "type": "string", + "description": "A 255 character limit name for an item in the registry." + }, + "VM Public ID": { + "type": "string", + "description": "The unique identifier for an Administered Item within a Registration Authority." + }, + "Concept Code": { + "type": "string" + }, + "VM Description": { + "type": "string", + "description": "The text of the most desirable meaning for the Administered Item." + }, + "Begin Date": { + "type": "string", + "description": "The particular day, month and year this item became allowed." + }, + "End Date": { + "type": "string", + "description": "The day, month and year this item becomes no longer allowed." } }, - "description" : "List of Permissible Values" + "description": "List of Permissible Values" } } } diff --git a/tests/resources/test.kwalify.yaml b/tests/resources/test.kwalify.yaml new file mode 100644 index 0000000..a913c49 --- /dev/null +++ b/tests/resources/test.kwalify.yaml @@ -0,0 +1,71 @@ +type: map +mapping: + "id": + type: str + required: true + "title": + type: str + required: true + "preferred label": + type: str + required: true + "type": + type: str + required: true + enum: [blacklist, binning subset, ribbon, tag] + "status": + type: str + required: true + enum: [active, obsolete] + "description": + type: str + required: true + "taxon": + - type: map + mapping: + "id": + type: str + required: true + pattern: /NCBITaxon\:\d+/ + "label": + type: str + required: true + "github": + - type: map + mapping: + "tracker": + type: string + required: true+ + pattern: /https:\/\/github\.com\/geneontology[^\s]+/ + "contact": + - type: map + mapping: + "email": + type: str + required: true + pattern: /[^\s]+@[^\s]+\.[^\s]+/ + "label": + type: str + required: true + "contributors": + - type: map + mapping: + "email": + type: str + required: true + pattern: /[^\s]+@[^\s]+\.[^\s]+/ + "label": + type: str + required: true + "orcid": + type: str + required: false + pattern: /https:\/\/orcid.org\/\d{4}\-\d{4}\-\d{4}\-\d{4}/ + "github": + type: str + required: false + + + + + diff --git a/tests/resources/test2.kwalify.yaml b/tests/resources/test2.kwalify.yaml new file mode 100644 index 0000000..59ee1c9 --- /dev/null +++ b/tests/resources/test2.kwalify.yaml @@ -0,0 +1,149 @@ +#### +#### Use kwalify and this schema to validate the config files. +#### Example: +#### kwalify -E -m ./metadata/datasets.schema.yaml +#### kwalify -E -f ./metadata/datasets.schema.yaml ./metadata/FOO.yaml +#### +#### To convert to JSON once passed: +#### ./node_modules/yamljs/bin/yaml2json -p ./metadata/datasets.yaml > ./metadata/datasets.json +#### +type: map +mapping: + "id": + type: str + required: true + unique: true + "label": + type: str + required: true + unique: true + "description": + type: str + required: true + unique: true + "project_name": + type: str + required: false + unique: false + "contact_email": + type: str + required: false + unique: false + "project_url": + type: str + required: false + unique: false + "funding_source": + type: str + required: false + unique: false + "email_report": + type: str + required: false + unique: false + "filter_out": + type: map + required: false + mapping: + "evidence": + type: seq + required: false + sequence: + - type: str + pattern: /ECO:[0-9]{7}/ + "evidence_reference": + type: seq + required: false + sequence: + - type: map + mapping: + "evidence": + type: str + required: true + pattern: /ECO:[0-9]{7}/ + "reference": + type: str + required: true + "annotation_properties": + type: seq + required: false + sequence: + - type: str + "datasets": + type: seq + required: true + sequence: + - type: map + mapping: + "id": + type: str + required: true + unique: true + "label": + type: str + required: true + unique: true + "description": + type: str + required: true + unique: true + "url": + type: str + required: false + unique: true + "type": + type: str + required: true + unique: false + "dataset": + type: str + required: true + unique: false + "submitter": + type: str + required: true + unique: false + "compression": + type: str + required: false + unique: false + enum: ['', gzip] + "source": + type: str + required: false + unique: false + "mirror_of": + type: str + required: false + unique: false + "species_code": + type: str + required: false + unique: false + "merges_into": + type: str + required: false + unique: false + "import": + type: bool + required: false + "entity_type": + type: str + required: false + unique: false + "aggregates": + type: str + required: false + unique: false + "status": + type: str + required: false + unique: false + "taxa": + type: seq + required: false + sequence: + - type: str + "exclude": + type: bool + required: false diff --git a/tests/test_importers/test_cadsr_importer.py b/tests/test_importers/test_cadsr_importer.py index d97bdbd..da1ea8e 100644 --- a/tests/test_importers/test_cadsr_importer.py +++ b/tests/test_importers/test_cadsr_importer.py @@ -23,4 +23,13 @@ def test_cadsr_import(): _sv = SchemaView(schema) with open(OWL_OUT, "w", encoding="utf-8") as stream: owlgen = OwlSchemaGenerator(OUT, add_root_classes=True, metaclasses=False, type_objects=False) - stream.write(owlgen.serialize()) \ No newline at end of file + stream.write(owlgen.serialize()) + + +def test_cadsr_to_table(): + ie = CADSRImportEngine() + paths = [os.path.join(INPUT_DIR, f"cadsr-cde-{i}.json") for i in IDS] + rows = list(ie.as_rows(paths)) + assert rows + for row in rows: + print(row) diff --git a/tests/test_importers/test_kwalify_importer.py b/tests/test_importers/test_kwalify_importer.py new file mode 100644 index 0000000..12b9c9c --- /dev/null +++ b/tests/test_importers/test_kwalify_importer.py @@ -0,0 +1,53 @@ +# -*- coding: utf-8 -*- + +import os +from pathlib import Path + +import pytest +from linkml.generators.pythongen import PythonGenerator +from linkml_runtime import SchemaView +from schema_automator.importers.kwalify_import_engine import KwalifyImportEngine +from schema_automator.utils import write_schema +from tests import INPUT_DIR, OUTPUT_DIR + + +EXPECTED_TEST1 = """ + status: + range: MySchema_status_enum + required: true + description: + range: string + required: true + taxon: + range: Taxon + required: false +""" + + +@pytest.mark.parametrize('test_input,schema_id, schema_name,class_name,expected', [ + ("test2", None, None, None, None), + ("test", None, None, None, None), + ("test", None, "my_schema", None, [EXPECTED_TEST1]), +]) +def test_kwalify_import(test_input, schema_id, schema_name, class_name, expected): + """ + Test importing kwalify + """ + ie = KwalifyImportEngine() + in_path = Path(INPUT_DIR) / f"{test_input}.kwalify.yaml" + out_path = str(Path(OUTPUT_DIR) / f"{test_input}-from-kwalify.yaml") + schema = ie.convert(in_path, + id=schema_id, name=schema_name, + class_name=class_name) + write_schema(schema, out_path) + schema_str = open(out_path).read() + py_str = PythonGenerator(out_path).serialize() + assert py_str is not None + _sv = SchemaView(schema) + if expected: + for e in expected: + assert e in schema_str + + + + From 7085128265a569c1f7c242f4919062b649873b08 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Thu, 25 Jul 2024 14:15:04 -0700 Subject: [PATCH 15/88] Accept anon individuals as values in owl_importer (#142) * Accept anon individuals as values in owl_importer Fixes #141 * codespell * update --- CODE_OF_CONDUCT.md | 2 +- poetry.lock | 3190 ++++++++--------- pyproject.toml | 2 +- schema_automator/cli.py | 4 + .../importers/owl_import_engine.py | 5 +- tests/resources/test-anon-individual.ofn | 123 + tests/test_importers/test_owl_importer.py | 8 + 7 files changed, 1547 insertions(+), 1787 deletions(-) create mode 100644 tests/resources/test-anon-individual.ofn diff --git a/CODE_OF_CONDUCT.md b/CODE_OF_CONDUCT.md index f877cf0..cff6b45 100644 --- a/CODE_OF_CONDUCT.md +++ b/CODE_OF_CONDUCT.md @@ -6,7 +6,7 @@ In the interest of fostering an open and welcoming environment, we as contributors and maintainers pledge to making participation in our project and our community a harassment-free experience for everyone, regardless of age, body size, disability, ethnicity, sex characteristics, gender identity and expression, -level of experience, education, socio-economic status, nationality, personal +level of experience, education, socioeconomic status, nationality, personal appearance, race, religion, or sexual identity and orientation. ## Our Standards diff --git a/poetry.lock b/poetry.lock index 7b87a86..ef48b44 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,10 +1,9 @@ -# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand. [[package]] name = "airium" version = "0.2.6" description = "Easy and quick html builder with natural syntax correspondence (python->html). No templates needed. Serves pure pythonic library with no dependencies." -category = "main" optional = false python-versions = "*" files = [ @@ -20,7 +19,6 @@ parse = ["beautifulsoup4 (>=4.10.0,<5.0)", "requests (>=2.12.0,<3)"] name = "alabaster" version = "0.7.16" description = "A light, configurable Sphinx theme" -category = "dev" optional = false python-versions = ">=3.9" files = [ @@ -30,21 +28,19 @@ files = [ [[package]] name = "annotated-types" -version = "0.6.0" +version = "0.7.0" description = "Reusable constraint types to use with typing.Annotated" -category = "main" optional = false python-versions = ">=3.8" files = [ - {file = "annotated_types-0.6.0-py3-none-any.whl", hash = "sha256:0641064de18ba7a25dee8f96403ebc39113d0cb953a01429249d5c7564666a43"}, - {file = "annotated_types-0.6.0.tar.gz", hash = "sha256:563339e807e53ffd9c267e99fc6d9ea23eb8443c08f112651963e24e22f84a5d"}, + {file = "annotated_types-0.7.0-py3-none-any.whl", hash = "sha256:1f02e8b43a8fbbc3f3e0d4f0f4bfc8131bcb4eebe8849b8e5c773f3a1c582a53"}, + {file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"}, ] [[package]] name = "antlr4-python3-runtime" version = "4.9.3" description = "ANTLR 4.9.3 runtime for Python 3.7" -category = "main" optional = false python-versions = "*" files = [ @@ -53,14 +49,13 @@ files = [ [[package]] name = "anyio" -version = "4.3.0" +version = "4.4.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" -category = "dev" optional = false python-versions = ">=3.8" files = [ - {file = "anyio-4.3.0-py3-none-any.whl", hash = "sha256:048e05d0f6caeed70d731f3db756d35dcc1f35747c8c403364a8332c630441b8"}, - {file = "anyio-4.3.0.tar.gz", hash = "sha256:f75253795a87df48568485fd18cdd2a3fa5c4f7c5be8e5e36637733fce06fed6"}, + {file = "anyio-4.4.0-py3-none-any.whl", hash = "sha256:c1b2d8f46a8a812513012e1107cb0e68c17159a7a594208005a57dc776e1bdc7"}, + {file = "anyio-4.4.0.tar.gz", hash = "sha256:5aadc6a1bbb7cdb0bede386cac5e2940f5e2ff3aa20277e991cf028e0585ce94"}, ] [package.dependencies] @@ -78,7 +73,6 @@ trio = ["trio (>=0.23)"] name = "appdirs" version = "1.4.4" description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." -category = "main" optional = false python-versions = "*" files = [ @@ -90,7 +84,6 @@ files = [ name = "appnope" version = "0.1.4" description = "Disable App Nap on macOS >= 10.9" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -102,7 +95,6 @@ files = [ name = "argon2-cffi" version = "23.1.0" description = "Argon2 for Python" -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -123,7 +115,6 @@ typing = ["mypy"] name = "argon2-cffi-bindings" version = "21.2.0" description = "Low-level CFFI bindings for Argon2" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -161,7 +152,6 @@ tests = ["pytest"] name = "arrow" version = "1.3.0" description = "Better dates & times for Python" -category = "main" optional = false python-versions = ">=3.8" files = [ @@ -175,13 +165,12 @@ types-python-dateutil = ">=2.8.10" [package.extras] doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"] -test = ["dateparser (>=1.0.0,<2.0.0)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (>=3.0.0,<4.0.0)"] +test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"] [[package]] name = "asttokens" version = "2.4.1" description = "Annotate AST trees with source code positions" -category = "dev" optional = false python-versions = "*" files = [ @@ -200,7 +189,6 @@ test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"] name = "async-lru" version = "2.0.4" description = "Simple LRU cache for asyncio" -category = "dev" optional = false python-versions = ">=3.8" files = [ @@ -215,7 +203,6 @@ typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""} name = "attrs" version = "23.2.0" description = "Classes Without Boilerplate" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -233,14 +220,13 @@ tests-no-zope = ["attrs[tests-mypy]", "cloudpickle", "hypothesis", "pympler", "p [[package]] name = "babel" -version = "2.14.0" +version = "2.15.0" description = "Internationalization utilities" -category = "main" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - 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"docopt", "pytest (<7.0.0)"] [[package]] name = "jinja2" -version = "3.1.3" +version = "3.1.4" description = "A very fast and expressive template engine." -category = "main" optional = false python-versions = ">=3.7" files = [ - {file = "Jinja2-3.1.3-py3-none-any.whl", hash = "sha256:7d6d50dd97d52cbc355597bd845fabfbac3f551e1f99619e39a35ce8c370b5fa"}, - {file = "Jinja2-3.1.3.tar.gz", hash = "sha256:ac8bd6544d4bb2c9792bf3a159e80bba8fda7f07e81bc3aed565432d5925ba90"}, + {file = "jinja2-3.1.4-py3-none-any.whl", hash = "sha256:bc5dd2abb727a5319567b7a813e6a2e7318c39f4f487cfe6c89c6f9c7d25197d"}, + {file = "jinja2-3.1.4.tar.gz", hash = "sha256:4a3aee7acbbe7303aede8e9648d13b8bf88a429282aa6122a993f0ac800cb369"}, ] [package.dependencies] @@ -1784,26 +1697,10 @@ MarkupSafe = ">=2.0" [package.extras] i18n = ["Babel (>=2.7)"] -[[package]] -name = "jsbeautifier" -version = "1.15.1" -description = "JavaScript unobfuscator and beautifier." -category = "main" -optional = false -python-versions = "*" 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hash = "sha256:0c6d2c09117550c089995247f605ae4cf77dd1533041d366351f6f298822ea74"}, +] + +[package.dependencies] +attrs = ">=19.2.0" + [[package]] name = "jsonpatch" version = "1.33" description = "Apply JSON-Patches (RFC 6902)" -category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*" files = [ @@ -1876,7 +1780,6 @@ jsonpointer = ">=1.9" name = "jsonpath-ng" version = "1.6.1" description = "A final implementation of JSONPath for Python that aims to be standard compliant, including arithmetic and binary comparison operators and providing clear AST for metaprogramming." -category = "main" optional = false python-versions = "*" files = [ @@ -1889,26 +1792,24 @@ ply = "*" [[package]] name = "jsonpointer" -version = "2.4" +version = "3.0.0" description = "Identify specific nodes in a JSON document (RFC 6901)" -category = "main" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, 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(>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] +test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] [extras] docs = [] diff --git a/pyproject.toml b/pyproject.toml index b03f8f9..49a1c75 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -64,4 +64,4 @@ mariadb = ["mariadb"] skip = '.git,*.lock,resources' check-hidden = true ignore-regex = '\bOGER\b' -ignore-words-list = 'sie' +ignore-words-list = 'sie,assertIn' diff --git a/schema_automator/cli.py b/schema_automator/cli.py index 18c33ef..92cbbef 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -454,6 +454,10 @@ def import_owl(owlfile, output, **args): See :ref:`importers` for more on the importer framework + For a list of caveats on LinkML to OWL mapping, see: + + - https://linkml.io/linkml/generators/owl.html + Example: schemauto import-owl prov.ofn -o my.yaml diff --git a/schema_automator/importers/owl_import_engine.py b/schema_automator/importers/owl_import_engine.py index 487a9bd..921923c 100644 --- a/schema_automator/importers/owl_import_engine.py +++ b/schema_automator/importers/owl_import_engine.py @@ -266,7 +266,10 @@ def set_cardinality(p, min_card, max_card): val = a.value.v if isinstance(sub, IRI): sub = self.iri_to_name(sub) - if isinstance(val, Literal): + if isinstance(val, AnonymousIndividual): + logging.info(f'Ignoring anonymous individuals: {sub} {strp} {val}') + continue + elif isinstance(val, Literal): val = str(val.v) elif isinstance(val, IRI): val = val.v diff --git a/tests/resources/test-anon-individual.ofn b/tests/resources/test-anon-individual.ofn new file mode 100644 index 0000000..d906c26 --- /dev/null +++ b/tests/resources/test-anon-individual.ofn @@ -0,0 +1,123 @@ +Prefix(:=) +Prefix(sh:=) +Prefix(dct:=) +Prefix(owl:=) +Prefix(rdf:=) +Prefix(xml:=) +Prefix(xsd:=) +Prefix(rdfs:=) +Prefix(vaem:=) + + +Ontology( +Annotation( "admin") +Annotation(dct:contributor "admin") +Annotation(dct:created "2024-07-16T13:56:07.545Z"^^xsd:dateTime) +Annotation(dct:creator "admin") +Annotation(dct:modified "2024-07-17T13:31:13.848Z"^^xsd:dateTime) +Annotation(dct:title "Test Ontology"@en) +Annotation( ) +Annotation(vaem:namespace ) +Annotation(rdfs:label "Test Ontology"@en) +Annotation(owl:priorVersion ) +Annotation(owl:versionInfo "0.2") + +Declaration(Class(sh:NodeShape)) +Declaration(Class()) +Declaration(Class()) +Declaration(ObjectProperty()) +Declaration(DataProperty()) +Declaration(NamedIndividual()) +Declaration(NamedIndividual()) +Declaration(AnnotationProperty()) +Declaration(AnnotationProperty(dct:contributor)) +Declaration(AnnotationProperty(dct:created)) +Declaration(AnnotationProperty(dct:creator)) +Declaration(AnnotationProperty(dct:modified)) +Declaration(AnnotationProperty(dct:title)) +Declaration(AnnotationProperty()) +Declaration(AnnotationProperty(vaem:namespace)) +Declaration(AnnotationProperty(sh:class)) +Declaration(AnnotationProperty(sh:datatype)) +Declaration(AnnotationProperty(sh:path)) +Declaration(AnnotationProperty(sh:property)) +Declaration(AnnotationProperty(sh:targetClass)) + +############################ +# Object Properties +############################ + +# Object Property: (contains) + +AnnotationAssertion( "admin") +AnnotationAssertion(dct:contributor "admin") +AnnotationAssertion(dct:created "2024-07-17T13:31:13.848Z"^^xsd:dateTime) +AnnotationAssertion(dct:creator "admin") +AnnotationAssertion(dct:modified "2024-07-17T13:31:13.848Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:isDefinedBy ) +AnnotationAssertion(rdfs:label "contains") + + +############################ +# Data Properties +############################ + +# Data Property: (name) + +AnnotationAssertion( "admin") +AnnotationAssertion(dct:contributor "admin") +AnnotationAssertion(dct:created "2024-07-16T13:57:08.281Z"^^xsd:dateTime) +AnnotationAssertion(dct:creator "admin") +AnnotationAssertion(dct:modified "2024-07-16T13:57:08.281Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:isDefinedBy ) +AnnotationAssertion(rdfs:label "name") + + + +############################ +# Classes +############################ + +# Class: (Person) + +AnnotationAssertion( "admin") +AnnotationAssertion(dct:contributor "admin") +AnnotationAssertion(dct:created "2024-07-16T13:57:08.281Z"^^xsd:dateTime) +AnnotationAssertion(dct:creator "admin") +AnnotationAssertion(dct:modified "2024-07-16T13:57:08.281Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:isDefinedBy ) +AnnotationAssertion(rdfs:label "Person"@en) + +# Class: (Team) + +AnnotationAssertion( "admin") +AnnotationAssertion(dct:contributor "admin") +AnnotationAssertion(dct:created "2024-07-17T13:31:13.848Z"^^xsd:dateTime) +AnnotationAssertion(dct:creator "admin") +AnnotationAssertion(dct:modified "2024-07-17T13:31:13.848Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:isDefinedBy ) +AnnotationAssertion(rdfs:label "Team"@en) + + +############################ +# Named Individuals +############################ + +# Individual: () + +AnnotationAssertion(sh:property _:genid2147483649) +AnnotationAssertion(sh:targetClass ) +ClassAssertion(sh:NodeShape ) + +# Individual: () + +AnnotationAssertion(sh:property _:genid2147483648) +AnnotationAssertion(sh:targetClass ) +ClassAssertion(sh:NodeShape ) + + +AnnotationAssertion(sh:class _:genid2147483648 ) +AnnotationAssertion(sh:path _:genid2147483648 ) +AnnotationAssertion(sh:datatype _:genid2147483649 xsd:string) +AnnotationAssertion(sh:path _:genid2147483649 rdfs:label) +) \ No newline at end of file diff --git a/tests/test_importers/test_owl_importer.py b/tests/test_importers/test_owl_importer.py index afc958a..77b72b6 100644 --- a/tests/test_importers/test_owl_importer.py +++ b/tests/test_importers/test_owl_importer.py @@ -28,4 +28,12 @@ def test_from_owl(self): with open(OUTSCHEMA_ENHANCED, 'w') as stream: stream.write(s) + def test_anon_individuals(self): + """ + Test that anonymous individuals are handled correctly + """ + oie = OwlImportEngine() + schema = oie.convert(os.path.join(INPUT_DIR, 'test-anon-individual.ofn'), name='anon_individuals') + write_schema(schema, os.path.join(OUTPUT_DIR, 'anon-individual-from-owl.yaml')) + From 7405c9c508bd6032fba56e58b965b3bca5c6f19f Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Fri, 16 Aug 2024 13:37:44 -0700 Subject: [PATCH 16/88] adding docs for caDSR import (#143) --- docs/packages/importers.rst | 17 + poetry.lock | 1090 +++++++++-------- pyproject.toml | 2 +- .../importers/cadsr_import_engine.py | 30 +- schema_automator/metamodels/cadsr.yaml | 66 +- 5 files changed, 693 insertions(+), 512 deletions(-) diff --git a/docs/packages/importers.rst b/docs/packages/importers.rst index 64548ff..16468c9 100644 --- a/docs/packages/importers.rst +++ b/docs/packages/importers.rst @@ -64,6 +64,21 @@ For example, for the `RNA Central public database `_. + +NCI implements a JSON serialization of ISO-11197. You can import this JSON and convert to LinkML: + +.. code-block:: + + schemauto import-cadsr "cdes/*.json" + + Packages ------- @@ -81,3 +96,5 @@ Packages .. autoclass:: DOSDPImportEngine :members: +.. autoclass:: CADSRImportEngine + :members: \ No newline at end of file diff --git a/poetry.lock b/poetry.lock index ef48b44..dd714bc 100644 --- a/poetry.lock +++ b/poetry.lock @@ -201,32 +201,32 @@ typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""} [[package]] name = "attrs" -version = "23.2.0" +version = "24.2.0" description = "Classes Without Boilerplate" optional = false python-versions = ">=3.7" files = [ - {file = "attrs-23.2.0-py3-none-any.whl", hash = "sha256:99b87a485a5820b23b879f04c2305b44b951b502fd64be915879d77a7e8fc6f1"}, - {file = "attrs-23.2.0.tar.gz", hash = "sha256:935dc3b529c262f6cf76e50877d35a4bd3c1de194fd41f47a2b7ae8f19971f30"}, + {file = "attrs-24.2.0-py3-none-any.whl", hash = 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b/schema_automator/importers/cadsr_import_engine.py @@ -68,7 +68,9 @@ class CADSRImportEngine(ImportEngine): Ingests the output of `caDSR API `_. - - Each CDE becomes a unique slot + Note that we include a LinkML schema for this in schema_automator.metamodels.cadsr + + - Each CDE (DataElement) becomes a unique slot - the CDE is added as a lot of a context-specific class - the context-specific class is a subclass of the CDE's DataElementConcept @@ -109,24 +111,32 @@ def convert(self, paths: Iterable[str], id: str=None, name: str=None, **kwargs) container = json_loader.load(file, target_class=cadsr.DataElementContainer) cde = container.DataElement ctxt = cde.context + ln = cde.longName source = urllib.parse.quote(ctxt) source = f"cadsr:{source}" + # Each DataElement becomes one slot; + # we make the name both unique and human readable + # TODO: check this; frequently reused, e.g. + # NCI Standards + Group ID slot = SlotDefinition( - name=urllib.parse.quote(underscore(f"{ctxt} {cde.preferredName}")), + name=urllib.parse.quote(underscore(f"{ctxt} {cde.preferredName} {ln}")), slot_uri=f"cadsr:{cde.publicId}", title=cde.preferredName, description=cde.preferredDefinition, - aliases=[cde.longName], + aliases=[ln], conforms_to=f"cadsr:DataElement", source=source, ) # each data element belongs to a concept # (may be reused across classes?) slots[slot.name] = slot - concept = cde.DataElementConcept + dec = cde.DataElementConcept + property = dec.Property + main_prop_concept, prop_mappings = extract_concepts(property.Concepts) # a concept is linked to a class - objectClass = concept.ObjectClass - # NCIT concepts describing the class + objectClass = dec.ObjectClass + # NCIT concepts describing the class; + # there will be one primary and possibly secondary concepts mainConcept, mappings = extract_concepts(objectClass.Concepts) class_name = objectClass.longName concept_name = urllib.parse.quote(camelcase(f"{ctxt} {class_name}")) @@ -146,10 +156,10 @@ def convert(self, paths: Iterable[str], id: str=None, name: str=None, **kwargs) if concept_name not in classes: cls = ClassDefinition( name=concept_name, - title=f"{concept.preferredName} ({ctxt})", - description=concept.preferredDefinition, - aliases=[concept.longName], - class_uri=f"cadsr:{concept.publicId}", + title=f"{dec.preferredName} ({ctxt})", + description=dec.preferredDefinition, + aliases=[dec.longName], + class_uri=f"cadsr:{dec.publicId}", is_a=parent_concept_name, conforms_to=f"cadsr:DataElementConcept", ) diff --git a/schema_automator/metamodels/cadsr.yaml b/schema_automator/metamodels/cadsr.yaml index a418b67..74b6241 100644 --- a/schema_automator/metamodels/cadsr.yaml +++ b/schema_automator/metamodels/cadsr.yaml @@ -11,6 +11,10 @@ slots: description: The unique identifier for an Administered Item within a Registration Authority. required: false + range: string ## usually a number encoded as string? + # identifier: true ## TODO - try this + comments: + - note this can appear at different levels version: description: The unique version identifier of the Administered Item. required: false @@ -453,6 +457,11 @@ classes: description: The text of the most desirable meaning for the Administered Item. longName: description: A 255 character limit name for an item in the registry. + examples: + - value: ASSESS + - value: TX + - value: ANAT_SITES + - value: AE_RESULTS context: description: An associated gov.nih.nci.cadsr.domain.Context object contextVersion: {} @@ -521,6 +530,10 @@ classes: range: DataElementQuery required: false DataElement: + description: An element representing a specific metadata element. + Corresponds to *slot* in LinkML + exact_mappings: + - linkml:SlotDefinition slots: - publicId - version @@ -560,16 +573,31 @@ classes: preferredName: description: A 30 character limit name by which an Administered Item is designated within a specific Context. + examples: + - value: Completion Status + - value: Specimen Type + - value: Date of Collection preferredDefinition: description: The text of the most desirable meaning for the Administered Item. longName: - description: A 255 character limit name for an item in the registry. + description: The long name of the data element. Maybe be a semi-human readable code, + may be a non-semantic number. Not guaranteed to be unique + examples: + - value: AE_OUTCOME_CD + - value: 2854464v1.0:2854442v1.0 context: description: An associated gov.nih.nci.cadsr.domain.Context object contextVersion: {} DataElementConcept: range: DataElementConcept required: false + description: The long name of the data element concept. Like the parent DataElement, + Maybe be a semi-human readable code, may be a non-semantic number. Not guaranteed to be unique, + in fact we should see reuse of the same DEC across DEs + examples: + - value: TX_COHORT_STDY + - value: 2867629v1.0:2423441v1.0 + - value: PERSON_ID ValueDomain: range: ValueDomain required: false @@ -748,6 +776,12 @@ classes: description: An indicator that characterizes the item as eliminated from the registry, thought the physical record still exists. ObjectClass: + aliases: + - OC + description: Class or class expression used to annotated a DataElementConcept (DEC). + OCs may correspond to a single NCIT concept, or they may be a composition. E.g. + DEC.OC.ln=C41136:C52673 (Dental Professional Practice) may correspond to + C52673 'Professional Practice' (primary) and C41136 'Dental' (secondary) slots: - publicId - version @@ -786,13 +820,22 @@ classes: preferredDefinition: description: The text of the most desirable meaning for the Administered Item. longName: - description: A 255 character limit name for an item in the registry. + description: The long name of the ObjectClass. This is typically the NCIT code, + or composition of codes + examples: + - value: C16960 + description: example value for DataElementConcept.ObjectClass + - value: C41136:C52673 + description: example value for DataElementConcept.ObjectClass + - value: Adverse Event + description: example value for DataElementConcept.ObjectClass context: description: An associated gov.nih.nci.cadsr.domain.Context object contextVersion: {} Concepts: multivalued: true range: Concept + description: Concepts from NCIT that annotate the ObjectClass origin: description: The source (document, project, discipline or model) for the Administered Item. @@ -850,8 +893,15 @@ classes: - displayOrder slot_usage: longName: - description: A 255 character limit name for an item in the registry. - conceptCode: {} + description: name of the concept. Note that in other contexts, longName may be an identifier, + but in Concepts it is the label (always from NCIT). + examples: + - value: "No" + - value: "Increase" + - value: "Nucleic Acid Amplification Test" + conceptCode: + examples: + - value: C20055 definition: {} evsSource: description: The name of the EVS concept code that was the source for the @@ -987,9 +1037,13 @@ classes: description: The unique version identifier of the Administered Item. required: false preferredName: - description: A 30 character limit name by which an Administered Item is designated - within a specific Context. + description: human-readable name of the PV required: false + examples: + - value: "No" + - value: "Not Applicable" + - value: "Absent" + - value: "Liver" longName: description: A 255 character limit name for an item in the registry. required: false From 168936d238b8ea70c5822d78bc6a70f954b1fe38 Mon Sep 17 00:00:00 2001 From: David Linke Date: Mon, 19 Aug 2024 20:46:01 +0200 Subject: [PATCH 17/88] Doc fixes & more metadata in pyproject for PyPI (#147) * Add more pkg metadata including link to repo & docs * Add link to repo & other minor doc fixes * Fix properties in pyproject for poetry * Fixes in docs to reduce sphinx warnings The only remaining warning are related to metamodels docs. * Add utilities package to index of docs --- CONTRIBUTING.md | 4 +- docs/_static/.gitkeep | 0 docs/cli.rst | 14 +- docs/index.rst | 7 +- docs/install.rst | 6 +- docs/introduction.rst | 14 +- docs/metamodels/index.rst | 10 -- docs/packages/annotators.rst | 4 +- docs/packages/generalizers.rst | 129 +++++++++--------- docs/packages/importers.rst | 16 +-- docs/packages/index.rst | 3 +- docs/packages/utilities.rst | 2 - pyproject.toml | 20 +++ schema_automator/cli.py | 34 ++--- .../generalizers/csv_data_generalizer.py | 6 +- schema_automator/importers/__init__.py | 2 +- .../importers/jsonschema_import_engine.py | 2 +- 17 files changed, 137 insertions(+), 136 deletions(-) create mode 100644 docs/_static/.gitkeep diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index b7902ab..8e3a3fe 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -29,7 +29,7 @@ For running tests, we use `pytest`. ## Discussion If you run into any issues or find certain functionality not documented/explained properly then feel free to -raise a ticket in the project's [issue tracker](https://github.com/linkml/issues). +raise a ticket in the project's [issue tracker](https://github.com/linkml/schema-automator/issues). There are issue templates to capture certain types of issues. ## First Time Contributors @@ -73,7 +73,7 @@ with a 'Do Not Merge' label. ## How to Report a Bug We recommend making a new ticket for each bug that you encounter while working with KGX. Please be sure to provide -sufficient context for a bug you are reporting. There are [Issue Templates](https://github.com/linkml/issues/new/choose) +sufficient context for a bug you are reporting. There are [Issue Templates](https://github.com/linkml/schema-automator/issues/new/choose) that you can use as a starting point. ## How to Request an Enhancement diff --git a/docs/_static/.gitkeep b/docs/_static/.gitkeep new file mode 100644 index 0000000..e69de29 diff --git a/docs/cli.rst b/docs/cli.rst index 941633b..7303875 100644 --- a/docs/cli.rst +++ b/docs/cli.rst @@ -1,24 +1,24 @@ -.. cli: +.. _cli: -Command Line -============ +Command Line Interface +====================== -All Schema Automator functionality is available via the ``schemauto`` command +All Schema Automator functionality is available via the ``schemauto`` command. Preamble -------- -.. warning :: +.. warning:: Previous versions had specific commands like ``tsv2linkml`` these are now deprecated. Instead these are now *subcommands* of the main ``schemauto`` command, and have been renamed. -.. note :: +.. note:: we follow the `CLIG `_ guidelines as far as possible Main commands ---------- +------------- .. currentmodule:: schema_automator.cli diff --git a/docs/index.rst b/docs/index.rst index 1c11982..0dd92be 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -1,13 +1,15 @@ LinkML Schema Automator -============================================ +======================= Schema Automator is a toolkit for bootstrapping and automatically enhancing schemas from a variety of sources. +The project is open source (BSD 3-clause license) and hosted on `GitHub `_. + Use cases include: 1. Inferring an initial schema or data dictionary from a dataset that is a collection of TSVs 2. Automatically annotating schema elements and enumerations using the BioPortal annotator -3. Importing from a language like RDFS/OWL +3. Importing from a language like RDFS/OWL/SQL The primary output of Schema Automator is a `LinkML Schema `_. This can be converted to other schema frameworks, including: @@ -23,7 +25,6 @@ schema frameworks, including: :maxdepth: 3 :caption: Contents: - index introduction install cli diff --git a/docs/install.rst b/docs/install.rst index db4c120..eae5a78 100644 --- a/docs/install.rst +++ b/docs/install.rst @@ -1,8 +1,8 @@ Installation -====== +============ Direct Installation ------------- +------------------- ``schema-automator`` and its components require Python 3.9 or greater. @@ -17,7 +17,7 @@ To check this works: schemauto --help Running via Docker ------------- +------------------ You can use the `Schema Automator Docker Container `_ diff --git a/docs/introduction.rst b/docs/introduction.rst index af7d04a..06b93f4 100644 --- a/docs/introduction.rst +++ b/docs/introduction.rst @@ -1,7 +1,5 @@ -.. _introduction: - Introduction -======================= +============ This is a toolkit that assists with generating and enhancing schemas and data models from a variety of sources. @@ -9,7 +7,7 @@ of sources. The primary end target is a `LinkML `_ schema, but the framework can be used to generate JSON-Schema, SHACL, SQL DDL etc via the `LinkML Generator `_ framework. -All functionality is available via a :ref:`cli`. In future there will be a web-based interface. +All functionality is available via a :ref:`CLI `. In future there will be a web-based interface. The functionality is also available by using the relevant Python :ref:`packages`. Generalization from Instance Data @@ -24,7 +22,7 @@ Generalizers allow you to *bootstrap* a schema by generalizing from existing dat * RDF instance graphs Importing from alternative modeling frameworks ---------------------------------- +---------------------------------------------- See :ref:`importers` @@ -35,7 +33,7 @@ See :ref:`importers` In future other frameworks will be supported Annotating schemas ---------------------------------- +------------------ See :ref:`annotators` @@ -46,7 +44,7 @@ Annotators to provide ways to automatically add metadata to your schema, includi * Annotate using Large Language Models (LLMs) General Utilities ---------------------------------- +----------------- -See :ref:`utilitiess` +See :ref:`utilities` diff --git a/docs/metamodels/index.rst b/docs/metamodels/index.rst index 4df48cb..179b512 100644 --- a/docs/metamodels/index.rst +++ b/docs/metamodels/index.rst @@ -8,16 +8,6 @@ metamodels in order to define transformations. :maxdepth: 3 :caption: Contents: - index cadsr/index frictionless/index dosdp/index - fhir/index - - -Indices and tables -================== - -* :ref:`genindex` -* :ref:`modindex` -* :ref:`search` diff --git a/docs/packages/annotators.rst b/docs/packages/annotators.rst index 2af0b92..0520a08 100644 --- a/docs/packages/annotators.rst +++ b/docs/packages/annotators.rst @@ -1,7 +1,5 @@ -.. annotators: - Annotators -========= +========== Importers take an existing schema and *annotate* it with information diff --git a/docs/packages/generalizers.rst b/docs/packages/generalizers.rst index 9ce15d8..7c1b38a 100644 --- a/docs/packages/generalizers.rst +++ b/docs/packages/generalizers.rst @@ -1,7 +1,5 @@ -.. generalizers: - Generalizers -========= +============ Generalizers take example data and *generalizes* to a schema @@ -11,7 +9,7 @@ Generalizers take example data and *generalizes* to a schema that *semi*-automates the creation of a new schema for you. Generalizing from a single TSV ------------------ +------------------------------ .. code-block:: @@ -90,65 +88,9 @@ Enums will be automatically inferred: Lowland Black Spruce: description: Lowland Black Spruce -Chaining an annotator ------------------ - -If you provide an ``--annotator`` option you can auto-annotate enums: - -.. code-block:: - - schemauto generalize-csv \ - --annotator bioportal:envo \ - tests/resources/NWT_wildfires_biophysical_2016.tsv \ - -o wildfire.yaml - -.. code-block:: yaml - - ecosystem_enum: - from_schema: https://w3id.org/MySchema - permissible_values: - Open Fen: - description: Open Fen - meaning: ENVO:00000232 - exact_mappings: - - ENVO:00000232 - Treed Fen: - description: Treed Fen - meaning: ENVO:00000232 - exact_mappings: - - ENVO:00000232 - Black Spruce: - description: Black Spruce - Poor Fen: - description: Poor Fen - meaning: ENVO:00000232 - exact_mappings: - - ENVO:00000232 - Fen: - description: Fen - meaning: ENVO:00000232 - Lowland: - description: Lowland - Upland: - description: Upland - meaning: ENVO:00000182 - Bog: - description: Bog - meaning: ENVO:01000534 - exact_mappings: - - ENVO:01000535 - - ENVO:00000044 - - ENVO:01001209 - - ENVO:01000527 - Lowland Black Spruce: - description: Lowland Black Spruce - -The annotation can also be run as a separate step - -See :ref:`annotators` Generalizing from multiple TSVs ------------- +------------------------------- You can use the ``generalize-tsvs`` command to generalize from *multiple* TSVs, with foreign key linkages auto-inferred. @@ -217,7 +159,7 @@ slots: range: string Generalizing from tables on the web ------------------ +----------------------------------- You can use ``generalize-htmltable`` @@ -274,12 +216,69 @@ Will generate: - TWAS P value Generalizing from JSON ------------ +---------------------- +tbw +Chaining an annotator +--------------------- + +If you provide an ``--annotator`` option you can auto-annotate enums: + +.. code-block:: + + schemauto generalize-csv \ + --annotator bioportal:envo \ + tests/resources/NWT_wildfires_biophysical_2016.tsv \ + -o wildfire.yaml + +.. code-block:: yaml + + ecosystem_enum: + from_schema: https://w3id.org/MySchema + permissible_values: + Open Fen: + description: Open Fen + meaning: ENVO:00000232 + exact_mappings: + - ENVO:00000232 + Treed Fen: + description: Treed Fen + meaning: ENVO:00000232 + exact_mappings: + - ENVO:00000232 + Black Spruce: + description: Black Spruce + Poor Fen: + description: Poor Fen + meaning: ENVO:00000232 + exact_mappings: + - ENVO:00000232 + Fen: + description: Fen + meaning: ENVO:00000232 + Lowland: + description: Lowland + Upland: + description: Upland + meaning: ENVO:00000182 + Bog: + description: Bog + meaning: ENVO:01000534 + exact_mappings: + - ENVO:01000535 + - ENVO:00000044 + - ENVO:01001209 + - ENVO:01000527 + Lowland Black Spruce: + description: Lowland Black Spruce + +The annotation can also be run as a separate step + +See :ref:`annotators` -Packages --------- +Packages for generalizing +------------------------- .. currentmodule:: schema_automator.generalizers diff --git a/docs/packages/importers.rst b/docs/packages/importers.rst index 16468c9..0aa4546 100644 --- a/docs/packages/importers.rst +++ b/docs/packages/importers.rst @@ -1,5 +1,3 @@ -.. importers: - Importers ========= @@ -15,7 +13,7 @@ Importers are the opposite of `Generators List[ForeignKey]: This procedure can generate false positives, so additional heuristics are applied. Each potential foreign key relationship gets an ad-hoc score: - - links across tables score more highly than within - - suffixes such as _id are more likely on PK and FK tables - - the foreign key column table is likely to start with the base column name + - links across tables score more highly than within + - suffixes such as _id are more likely on PK and FK tables + - the foreign key column table is likely to start with the base column name In addition, if there are competing primary keys for a table, the top scoring one is selected """ fks: List[ForeignKey] = [] diff --git a/schema_automator/importers/__init__.py b/schema_automator/importers/__init__.py index bcb9821..2011d25 100644 --- a/schema_automator/importers/__init__.py +++ b/schema_automator/importers/__init__.py @@ -2,4 +2,4 @@ from schema_automator.importers.owl_import_engine import OwlImportEngine from schema_automator.importers.dosdp_import_engine import DOSDPImportEngine from schema_automator.importers.frictionless_import_engine import FrictionlessImportEngine - +from schema_automator.importers.cadsr_import_engine import CADSRImportEngine diff --git a/schema_automator/importers/jsonschema_import_engine.py b/schema_automator/importers/jsonschema_import_engine.py index 661200d..98d571f 100644 --- a/schema_automator/importers/jsonschema_import_engine.py +++ b/schema_automator/importers/jsonschema_import_engine.py @@ -35,7 +35,7 @@ def json_schema_from_open_api(oa: Dict) -> Dict: @dataclass class JsonSchemaImportEngine(ImportEngine): """ - A :ref:`ImportEngine` that imports a JSON-Schema representation to a LinkML Schema + An ImportEngine that imports a JSON-Schema representation to a LinkML Schema """ use_attributes: bool = False is_openapi: bool = False From 2ae9ba2fd200809d7517983a352aba1f5ba9a7e6 Mon Sep 17 00:00:00 2001 From: David Linke Date: Mon, 19 Aug 2024 20:46:17 +0200 Subject: [PATCH 18/88] Add version option to cli and dynamic versioning (#144) * Add version option to cli and dynamic versioning * Set same auto-versioning style as in LinkML --- pyproject.toml | 9 +++++++-- schema_automator/__init__.py | 8 ++++++++ schema_automator/cli.py | 2 ++ 3 files changed, 17 insertions(+), 2 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 0f361a2..684e019 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -68,8 +68,13 @@ lxml = ">=4.9.1" llm = ">=0.12" [build-system] -requires = ["poetry-core>=1.0.0"] -build-backend = "poetry.core.masonry.api" +requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning>=1.0.0,<2.0.0"] +build-backend = "poetry_dynamic_versioning.backend" + +[tool.poetry-dynamic-versioning] +enable = true +vcs = "git" +style = "pep440" [tool.poetry.scripts] schemauto = "schema_automator.cli:main" diff --git a/schema_automator/__init__.py b/schema_automator/__init__.py index 2eadd7a..0cfc39b 100644 --- a/schema_automator/__init__.py +++ b/schema_automator/__init__.py @@ -1,3 +1,11 @@ +from importlib import metadata + from schema_automator.annotators import * from schema_automator.importers import * from schema_automator.generalizers import * + +try: + __version__ = metadata.version(__package__) +except metadata.PackageNotFoundError: + # package is not installed + __version__ = "0.0.0" # pragma: no cover diff --git a/schema_automator/cli.py b/schema_automator/cli.py index 1be4016..bd76320 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -33,6 +33,7 @@ from schema_automator.importers.sql_import_engine import SqlImportEngine from schema_automator.importers.tabular_import_engine import TableImportEngine from schema_automator.utils.schemautils import write_schema +from schema_automator import __version__ input_option = click.option( "-i", @@ -80,6 +81,7 @@ help="Set the level of verbosity") @click.option("-q", "--quiet", help="Silence all diagnostics") +@click.version_option(__version__, "-V", "--version") def main(verbose: int, quiet: bool): """Run the LinkML Schema Automator Command Line. From 1d99dbc2879fe14de679ed326cb50458be886805 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Tue, 17 Dec 2024 16:32:08 +1100 Subject: [PATCH 19/88] Refactor postgres into an extra --- poetry.lock | 3382 +++++++++++++++++++++++++----------------------- pyproject.toml | 3 +- 2 files changed, 1755 insertions(+), 1630 deletions(-) diff --git a/poetry.lock b/poetry.lock index dd714bc..bf2cc53 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.5 and should not be changed by hand. [[package]] name = "airium" @@ -49,25 +49,25 @@ files = [ [[package]] name = "anyio" -version = "4.4.0" +version = "4.7.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" optional = false -python-versions = ">=3.8" +python-versions = ">=3.9" files = [ - {file = "anyio-4.4.0-py3-none-any.whl", hash = "sha256:c1b2d8f46a8a812513012e1107cb0e68c17159a7a594208005a57dc776e1bdc7"}, - {file = "anyio-4.4.0.tar.gz", hash = "sha256:5aadc6a1bbb7cdb0bede386cac5e2940f5e2ff3aa20277e991cf028e0585ce94"}, + {file = "anyio-4.7.0-py3-none-any.whl", hash = "sha256:ea60c3723ab42ba6fff7e8ccb0488c898ec538ff4df1f1d5e642c3601d07e352"}, + {file = "anyio-4.7.0.tar.gz", hash = "sha256:2f834749c602966b7d456a7567cafcb309f96482b5081d14ac93ccd457f9dd48"}, ] [package.dependencies] exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""} idna = ">=2.8" sniffio = ">=1.1" -typing-extensions = {version = ">=4.1", markers = "python_version < \"3.11\""} +typing_extensions = {version = ">=4.5", markers = "python_version < \"3.13\""} [package.extras] -doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"] -test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"] -trio = ["trio (>=0.23)"] +doc = ["Sphinx (>=7.4,<8.0)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx_rtd_theme"] +test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "truststore (>=0.9.1)", "uvloop (>=0.21)"] +trio = ["trio (>=0.26.1)"] [[package]] name = "appdirs" @@ -169,21 +169,18 @@ test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock [[package]] name = "asttokens" -version = "2.4.1" +version = "3.0.0" description = "Annotate AST trees with source code positions" optional = false -python-versions = "*" +python-versions = ">=3.8" files = [ - {file = "asttokens-2.4.1-py2.py3-none-any.whl", hash = "sha256:051ed49c3dcae8913ea7cd08e46a606dba30b79993209636c4875bc1d637bc24"}, - {file = "asttokens-2.4.1.tar.gz", hash = "sha256:b03869718ba9a6eb027e134bfdf69f38a236d681c83c160d510768af11254ba0"}, + {file = "asttokens-3.0.0-py3-none-any.whl", hash = "sha256:e3078351a059199dd5138cb1c706e6430c05eff2ff136af5eb4790f9d28932e2"}, + {file = "asttokens-3.0.0.tar.gz", hash = "sha256:0dcd8baa8d62b0c1d118b399b2ddba3c4aff271d0d7a9e0d4c1681c79035bbc7"}, ] -[package.dependencies] -six = ">=1.12.0" - [package.extras] -astroid = ["astroid (>=1,<2)", "astroid (>=2,<4)"] -test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"] +astroid = ["astroid (>=2,<4)"] +test = ["astroid (>=2,<4)", "pytest", "pytest-cov", "pytest-xdist"] [[package]] name = "async-lru" @@ -201,19 +198,19 @@ typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""} [[package]] name = "attrs" -version = "24.2.0" +version = "24.3.0" description = "Classes Without Boilerplate" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "attrs-24.2.0-py3-none-any.whl", hash = "sha256:81921eb96de3191c8258c199618104dd27ac608d9366f5e35d011eae1867ede2"}, - {file = "attrs-24.2.0.tar.gz", hash = "sha256:5cfb1b9148b5b086569baec03f20d7b6bf3bcacc9a42bebf87ffaaca362f6346"}, + {file = "attrs-24.3.0-py3-none-any.whl", hash = "sha256:ac96cd038792094f438ad1f6ff80837353805ac950cd2aa0e0625ef19850c308"}, + {file = "attrs-24.3.0.tar.gz", hash = "sha256:8f5c07333d543103541ba7be0e2ce16eeee8130cb0b3f9238ab904ce1e85baff"}, ] [package.extras] benchmark = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-codspeed", "pytest-mypy-plugins", "pytest-xdist[psutil]"] cov = ["cloudpickle", "coverage[toml] (>=5.3)", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] -dev = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pre-commit", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] +dev = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pre-commit-uv", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier (<24.7)"] tests = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"] @@ -266,19 +263,19 @@ lxml = ["lxml"] [[package]] name = "bioregistry" -version = "0.11.10" +version = "0.11.28" description = "Integrated registry of biological databases and nomenclatures" optional = false -python-versions = ">=3.8" +python-versions = ">=3.9" files = [ - {file = "bioregistry-0.11.10-py3-none-any.whl", hash = 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"wrapt-1.17.0.tar.gz", hash = "sha256:16187aa2317c731170a88ef35e8937ae0f533c402872c1ee5e6d079fcf320801"}, ] -[[package]] -name = "xmltodict" -version = "0.13.0" -description = "Makes working with XML feel like you are working with JSON" -optional = false -python-versions = ">=3.4" -files = [ - {file = "xmltodict-0.13.0-py2.py3-none-any.whl", hash = "sha256:aa89e8fd76320154a40d19a0df04a4695fb9dc5ba977cbb68ab3e4eb225e7852"}, - {file = "xmltodict-0.13.0.tar.gz", hash = "sha256:341595a488e3e01a85a9d8911d8912fd922ede5fecc4dce437eb4b6c8d037e56"}, -] - [[package]] name = "zipp" version = "3.21.0" @@ -6083,10 +6104,10 @@ type = ["pytest-mypy"] [extras] docs = [] -mariadb = [] +mariadb = ["mariadb"] postgres = ["psycopg2-binary"] [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "b574d9bea4398fc21cc719fd6b144bd24edf31b27e9afde133ba160e37aff21a" +content-hash = "e3e1e5d2b2741ea20e4fbc0409491bee46e16d057c33f2613b629bb5b8bc2a0d" diff --git a/pyproject.toml b/pyproject.toml index 7dd0741..94f8077 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -33,10 +33,8 @@ packages = [ [tool.poetry.dependencies] python = "^3.9" linkml = "^1.7.4" -mkdocs = ">=1.2.3" pandas = ">=1.3.5" python-dateutil = ">=2.8.2" -jsonpatch = ">=1.32" quantulum3 = ">=0.7.9" funowl = ">=0.2.3" click-log = ">=0.4.0" @@ -48,13 +46,19 @@ pandera = ">=0.12.0" tomlkit = ">=0.11.4" inflect = ">=6.0.0" schemasheets = ">=0.1.24" -xmltodict = "^0.13.0" -click-default-group = "^1.2.4" linkml-runtime = "^1.7.2" -duckdb = "^0.10.1" -numpy = "<2.0" +duckdb = { version = "^0.10.1", optional = true } +click = "^8.1.7" +deprecated = "^1.2.15" +mariadb = {version = "^1.1.11", optional = true} +sqlalchemy = "^2.0.36" +ruamel-yaml = "^0.18.6" +rdflib = "^7.1.1" +jsonasobj2 = "^1.0.4" +deprecation = "^2.1.0" [tool.poetry.dev-dependencies] +mkdocs = ">=1.2.3" pytest = ">=7.1.1" Sphinx = ">=4.4.0" sphinx-pdj-theme = ">=0.2.1" From ff6ec53f50b0ec0c763d8cf9cdbf83418fa84d57 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Wed, 18 Dec 2024 14:33:07 +1100 Subject: [PATCH 21/88] Slots correctly being attached to classes --- .../importers/rdfs_import_engine.py | 128 +++++++++++------- 1 file changed, 78 insertions(+), 50 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 3abc4cb..47061bc 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -1,5 +1,6 @@ import logging from typing import Dict, List, Any +import typing from collections import defaultdict from linkml.utils.schema_builder import SchemaBuilder @@ -9,24 +10,24 @@ SlotDefinition, ClassDefinition, ) -from funowl.converters.functional_converter import to_python -from funowl import * +# from funowl.converters.functional_converter import to_python +# from funowl import * from dataclasses import dataclass, field from linkml_runtime.utils.formatutils import underscore from linkml_runtime.utils.introspection import package_schemaview -from rdflib import Graph, RDF, OWL, URIRef, RDFS, SKOS, SDO, Namespace +from rdflib import Graph, RDF, OWL, URIRef, RDFS, SKOS, SDO, Namespace, Literal from schema_automator.importers.import_engine import ImportEngine from schema_automator.utils.schemautils import write_schema HTTP_SDO = Namespace("http://schema.org/") -DEFAULT_METAMODEL_MAPPINGS = { +DEFAULT_METAMODEL_MAPPINGS: Dict[str, List[URIRef]] = { "is_a": [RDFS.subClassOf, SKOS.broader], "domain_of": [HTTP_SDO.domainIncludes, SDO.domainIncludes], - "rangeIncludes": [HTTP_SDO.rangeIncludes, SDO.rangeIncludes], + "range": [HTTP_SDO.rangeIncludes, SDO.rangeIncludes], "exact_mappings": [OWL.sameAs, HTTP_SDO.sameAs], ClassDefinition.__name__: [RDFS.Class, OWL.Class, SKOS.Concept], SlotDefinition.__name__: [ @@ -43,22 +44,26 @@ class RdfsImportEngine(ImportEngine): """ An ImportEngine that takes RDFS and converts it to a LinkML schema """ - - mappings: dict = None - initial_metamodel_mappings: Dict[str, List[URIRef]] = None - metamodel_mappings: Dict[str, List[URIRef]] = None - reverse_metamodel_mappings: Dict[URIRef, List[str]] = None - include_unmapped_annotations = False - metamodel = None - metamodel_schemaview: SchemaView = None - classdef_slots: List[str] = None + #: View over the LinkML metamodel + metamodel: SchemaView = field(init=False) + #: Mapping from field names in this RDF schema (e.g. `price`) to IRIs (e.g. `http://schema.org/price`) + mappings: Dict[str, URIRef] = field(default_factory=dict) + #: User-defined mapping from LinkML metamodel slots (such as `domain_of`) to RDFS IRIs (such as http://schema.org/domainIncludes) + initial_metamodel_mappings: Dict[str, URIRef | List[URIRef]] = field(default_factory=dict) + #: Combined mapping from LinkML metamodel slots to RDFS IRIs + metamodel_mappings: Dict[str, List[URIRef]] = field(default_factory=lambda: defaultdict(list)) + #: Reverse of `metamodel_mappings`, but supports multiple terms mapping to the same IRI + reverse_metamodel_mappings: Dict[URIRef, List[str]] = field(default_factory=lambda: defaultdict(list)) + #: The names of LinkML ClassDefinition slots + classdef_slots: set[str] = field(init=False) + #: The names of LinkML SlotDefinition slot slots + slotdef_slots: set[str] = field(init=False) def __post_init__(self): sv = package_schemaview("linkml_runtime.linkml_model.meta") - self.metamodel_schemaview = sv self.metamodel = sv - self.metamodel_mappings = defaultdict(list) - self.reverse_metamodel_mappings = defaultdict(list) + + # Populate the combined metamodel mappings for k, vs in DEFAULT_METAMODEL_MAPPINGS.items(): self.metamodel_mappings[k].extend(vs) for v in vs: @@ -71,6 +76,8 @@ def __post_init__(self): for v in vs: self.reverse_metamodel_mappings[URIRef(v)].append(k) logging.info(f"Adding mapping {k} -> {v}") + + # LinkML fields have some built-in mappings to other ontologies, such as https://w3id.org/linkml/Any -> AnyValue for e in sv.all_elements().values(): mappings = [] for ms in sv.get_mappings(e.name, expand=True).values(): @@ -79,17 +86,18 @@ def __post_init__(self): mappings.append(uri) self.reverse_metamodel_mappings[uri].append(e.name) self.metamodel_mappings[e.name] = mappings - self.defclass_slots = [s.name for s in sv.class_induced_slots(ClassDefinition.class_name)] + self.classdef_slots = {s.name for s in sv.class_induced_slots(ClassDefinition.class_name)} + self.slotdef_slots = {s.name for s in sv.class_induced_slots(SlotDefinition.class_name)} def convert( self, file: str, - name: str = None, - format="turtle", - default_prefix: str = None, - model_uri: str = None, - identifier: str = None, - **kwargs, + name: str | None = None, + format: str | None="turtle", + default_prefix: str | None = None, + model_uri: str | None = None, + identifier: str | None = None, + **kwargs: Any, ) -> SchemaDefinition: """ Converts an OWL schema-style ontology @@ -101,7 +109,6 @@ def convert( :param kwargs: :return: """ - self.mappings = {} g = Graph() g.parse(file, format=format) if name is not None and default_prefix is None: @@ -117,35 +124,51 @@ def convert( if k == "schema" and v != "http://schema.org/": continue sb.add_prefix(k, v, replace_if_present=True) - if default_prefix is not None: + if default_prefix is not None and schema.prefixes is not None : schema.default_prefix = default_prefix - if default_prefix not in schema.prefixes: + if model_uri is not None and default_prefix not in schema.prefixes: sb.add_prefix(default_prefix, model_uri, replace_if_present=True) schema.id = schema.prefixes[default_prefix].prefix_reference cls_slots = defaultdict(list) - props = [] + + # Build a list of all properties in the schema + props: list[URIRef] = [] + + # Add explicit properties, ie those with a RDF.type mapping for rdfs_property_metaclass in self._rdfs_metamodel_iri( SlotDefinition.__name__ ): for p in g.subjects(RDF.type, rdfs_property_metaclass): - props.append(p) - # implicit properties + if isinstance(p, URIRef): + props.append(p) + + # Add implicit properties, ie those that are the domain or range of a property for metap in ( - self.reverse_metamodel_mappings["domain_of"] - + self.reverse_metamodel_mappings["rangeIncludes"] + self.metamodel_mappings["domain_of"] + + self.metamodel_mappings["rangeIncludes"] ): for p, _, _o in g.triples((None, metap, None)): - props.append(p) + if isinstance(p, URIRef): + props.append(p) + for p in set(props): sn = self.iri_to_name(p) - init_dict = self._dict_for_subject(g, p) + #: kwargs for SlotDefinition + init_dict = self._dict_for_subject(g, p, "slot") + + # Special case for domains and ranges: add them directly as class slots if "domain_of" in init_dict: for x in init_dict["domain_of"]: cls_slots[x].append(sn) del init_dict["domain_of"] - if "rangeIncludes" in init_dict: - init_dict["any_of"] = [{"range": x} for x in init_dict["rangeIncludes"]] - del init_dict["rangeIncludes"] + if "range" in init_dict: + range = init_dict["range"] + # Handle a range of multiple types + if isinstance(range, list): + init_dict["any_of"] = [{"range": x} for x in init_dict["rangeIncludes"]] + del init_dict["range"] + # elif isinstance(range, str): + # init_dict["range"] = range slot = SlotDefinition(sn, **init_dict) slot.slot_uri = str(p.n3(g.namespace_manager)) sb.add_slot(slot) @@ -160,7 +183,7 @@ def convert( rdfs_classes.append(o) for s in set(rdfs_classes): cn = self.iri_to_name(s) - init_dict = self._dict_for_subject(g, s) + init_dict = self._dict_for_subject(g, s, "class") c = ClassDefinition(cn, **init_dict) c.slots = cls_slots.get(cn, []) c.class_uri = str(s.n3(g.namespace_manager)) @@ -174,21 +197,26 @@ def convert( c.slots.append(identifier) return schema - def _dict_for_subject(self, g: Graph, s: URIRef) -> Dict[str, Any]: + def _dict_for_subject(self, g: Graph, s: URIRef, subject_type: typing.Literal["slot", "class"]) -> Dict[str, Any]: """ Looks up triples for a subject and converts to dict using linkml keys. - :param g: - :param p: - :return: + :param g: RDFS graph + :param s: property URI in that graph + :return: Dictionary mapping linkml metamodel keys to values """ init_dict = {} + # Each RDFS predicate/object pair corresponds to a LinkML key value pair for the slot for pp, obj in g.predicate_objects(s): if pp == RDF.type: continue metaslot_name = self._element_from_iri(pp) logging.debug(f"Mapping {pp} -> {metaslot_name}") - if metaslot_name not in self.defclass_slots: + # Filter out slots that don't belong in a class definition + if subject_type == "class" and metaslot_name not in self.classdef_slots: + continue + # Filter out slots that don't belong in a slot definition + if subject_type == "slot" and metaslot_name not in self.slotdef_slots: continue if metaslot_name is None: logging.warning(f"Not mapping {pp}") @@ -209,14 +237,14 @@ def _dict_for_subject(self, g: Graph, s: URIRef) -> Dict[str, Any]: def _rdfs_metamodel_iri(self, name: str) -> List[URIRef]: return self.metamodel_mappings.get(name, []) - def _element_from_iri(self, iri: URIRef) -> str: + def _element_from_iri(self, iri: URIRef) -> str | None: r = self.reverse_metamodel_mappings.get(iri, []) if len(r) > 0: if len(r) > 1: logging.debug(f"Multiple mappings for {iri}: {r}") return r[0] - def _object_to_value(self, obj: Any, metaslot: SlotDefinition = None) -> Any: + def _object_to_value(self, obj: Any, metaslot: SlotDefinition) -> Any: if isinstance(obj, URIRef): if metaslot.range == "uriorcurie" or metaslot.range == "uri": return str(obj) @@ -231,9 +259,9 @@ def iri_to_name(self, v: URIRef) -> str: self.mappings[n] = v return n - def _as_name(self, v: URIRef): - v = str(v) + def _as_name(self, v: URIRef) -> str: + v_str = str(v) for sep in ["#", "/", ":"]: - if sep in v: - return v.split(sep)[-1] - return v + if sep in v_str: + return v_str.split(sep)[-1] + return v_str From 517f475881ee6ddd45d581e4e86a6a9f48648623 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Wed, 18 Dec 2024 14:56:33 +1100 Subject: [PATCH 22/88] Refactor slot and class generation into separate methods for clarity --- .../importers/rdfs_import_engine.py | 90 ++++++++++++------- 1 file changed, 57 insertions(+), 33 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 47061bc..5aef9b8 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -1,5 +1,5 @@ import logging -from typing import Dict, List, Any +from typing import Dict, Iterable, List, Any, Optional import typing from collections import defaultdict @@ -131,13 +131,63 @@ def convert( schema.id = schema.prefixes[default_prefix].prefix_reference cls_slots = defaultdict(list) - # Build a list of all properties in the schema - props: list[URIRef] = [] + for slot in self.generate_rdfs_properties(g, cls_slots): + sb.add_slot(slot) + for cls in self.process_rdfs_classes(g, cls_slots): + sb.add_class(cls) + + if identifier is not None: + id_slot = SlotDefinition(identifier, identifier=True, range="uriorcurie") + schema.slots[identifier] = id_slot + for c in schema.classes.values(): + if not c.is_a and not c.mixins: + if identifier not in c.slots: + c.slots.append(identifier) + return schema + + def process_rdfs_classes( + self, + g: Graph, + cls_slots: Dict[str, List[str]], + ) -> Iterable[ClassDefinition]: + """ + Converts the RDFS classes in the graph to LinkML SlotDefinitions + """ + rdfs_classes: List[URIRef] = [] + + for rdfs_class_metaclass in self._rdfs_metamodel_iri(ClassDefinition.__name__): + for s in g.subjects(RDF.type, rdfs_class_metaclass): + if isinstance(s, URIRef): + rdfs_classes.append(s) + + # implicit classes + for metap in [RDFS.subClassOf]: + for s, _, o in g.triples((None, metap, None)): + if isinstance(s, URIRef): + rdfs_classes.append(s) + if isinstance(o, URIRef): + rdfs_classes.append(o) + + for s in set(rdfs_classes): + cn = self.iri_to_name(s) + init_dict = self._dict_for_subject(g, s, "class") + c = ClassDefinition(cn, **init_dict) + c.slots = cls_slots.get(cn, []) + c.class_uri = str(s.n3(g.namespace_manager)) + yield c + + def generate_rdfs_properties( + self, + g: Graph, + cls_slots: Dict[str, List[str]] + ) -> Iterable[SlotDefinition]: + """ + Converts the RDFS properties in the graph to LinkML SlotDefinitions + """ + props: List[URIRef] = [] # Add explicit properties, ie those with a RDF.type mapping - for rdfs_property_metaclass in self._rdfs_metamodel_iri( - SlotDefinition.__name__ - ): + for rdfs_property_metaclass in self._rdfs_metamodel_iri(SlotDefinition.__name__): for p in g.subjects(RDF.type, rdfs_property_metaclass): if isinstance(p, URIRef): props.append(p) @@ -167,35 +217,9 @@ def convert( if isinstance(range, list): init_dict["any_of"] = [{"range": x} for x in init_dict["rangeIncludes"]] del init_dict["range"] - # elif isinstance(range, str): - # init_dict["range"] = range slot = SlotDefinition(sn, **init_dict) slot.slot_uri = str(p.n3(g.namespace_manager)) - sb.add_slot(slot) - rdfs_classes = [] - for rdfs_class_metaclass in self._rdfs_metamodel_iri(ClassDefinition.__name__): - for s in g.subjects(RDF.type, rdfs_class_metaclass): - rdfs_classes.append(s) - # implicit classes - for metap in [RDFS.subClassOf]: - for s, _, o in g.triples((None, metap, None)): - rdfs_classes.append(s) - rdfs_classes.append(o) - for s in set(rdfs_classes): - cn = self.iri_to_name(s) - init_dict = self._dict_for_subject(g, s, "class") - c = ClassDefinition(cn, **init_dict) - c.slots = cls_slots.get(cn, []) - c.class_uri = str(s.n3(g.namespace_manager)) - sb.add_class(c) - if identifier is not None: - id_slot = SlotDefinition(identifier, identifier=True, range="uriorcurie") - schema.slots[identifier] = id_slot - for c in schema.classes.values(): - if not c.is_a and not c.mixins: - if identifier not in c.slots: - c.slots.append(identifier) - return schema + yield slot def _dict_for_subject(self, g: Graph, s: URIRef, subject_type: typing.Literal["slot", "class"]) -> Dict[str, Any]: """ From c5127232e04366e2604709b6b1c69388825ac678 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Wed, 18 Dec 2024 16:31:02 +1100 Subject: [PATCH 23/88] Fix all type errors --- .../importers/rdfs_import_engine.py | 39 ++++++++++++++----- 1 file changed, 29 insertions(+), 10 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 5aef9b8..9db81ec 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -1,5 +1,5 @@ import logging -from typing import Dict, Iterable, List, Any, Optional +from typing import Dict, Iterable, List, Any import typing from collections import defaultdict @@ -9,9 +9,8 @@ SchemaDefinition, SlotDefinition, ClassDefinition, + Prefix ) -# from funowl.converters.functional_converter import to_python -# from funowl import * from dataclasses import dataclass, field @@ -19,7 +18,6 @@ from linkml_runtime.utils.introspection import package_schemaview from rdflib import Graph, RDF, OWL, URIRef, RDFS, SKOS, SDO, Namespace, Literal from schema_automator.importers.import_engine import ImportEngine -from schema_automator.utils.schemautils import write_schema HTTP_SDO = Namespace("http://schema.org/") @@ -124,11 +122,13 @@ def convert( if k == "schema" and v != "http://schema.org/": continue sb.add_prefix(k, v, replace_if_present=True) - if default_prefix is not None and schema.prefixes is not None : + if default_prefix is not None and isinstance(schema.prefixes, dict): schema.default_prefix = default_prefix if model_uri is not None and default_prefix not in schema.prefixes: sb.add_prefix(default_prefix, model_uri, replace_if_present=True) - schema.id = schema.prefixes[default_prefix].prefix_reference + prefix = schema.prefixes[default_prefix] + if isinstance(prefix, Prefix): + schema.id = prefix.prefix_reference cls_slots = defaultdict(list) for slot in self.generate_rdfs_properties(g, cls_slots): @@ -136,15 +136,34 @@ def convert( for cls in self.process_rdfs_classes(g, cls_slots): sb.add_class(cls) - if identifier is not None: + if identifier is not None and isinstance(schema.slots, dict) and isinstance(schema.classes, dict): id_slot = SlotDefinition(identifier, identifier=True, range="uriorcurie") schema.slots[identifier] = id_slot for c in schema.classes.values(): - if not c.is_a and not c.mixins: - if identifier not in c.slots: - c.slots.append(identifier) + if isinstance(c, ClassDefinition) and isinstance(c.slots, list): + if not c.is_a and not c.mixins: + if identifier not in c.slots: + c.slots.append(identifier) + self.fix_missing(schema) return schema + def fix_missing(self, schema: SchemaDefinition) -> None: + """ + For some properties we have a `subproperty_of` that references a slot that doesn't exist. + This removes such links. + For example with `schema:name`, we have a `subPropertyOf` that references `rdfs:label`, which is from + the RDFS metamodel that we don't currently import. + """ + if not isinstance(schema.slots, dict): + raise ValueError("SchemaBuilder schema must have slots as a dict") + slot_names: set[str] = set(schema.slots.keys()) + for slot in schema.slots.values(): + if not isinstance(slot, SlotDefinition): + raise ValueError(f"Slot {slot} is not a SlotDefinition") + if slot.subproperty_of is not None and slot.subproperty_of not in slot_names: + logging.warning(f"Slot {slot.name} has subproperty_of {slot.subproperty_of}, but that slot is missing") + slot.subproperty_of = None + def process_rdfs_classes( self, g: Graph, From fa08fc76075e4f1eff2274ffaf51163dbdaeb70d Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 6 Jan 2025 13:40:38 +1100 Subject: [PATCH 24/88] Add RDFS domain and range to default mappings --- schema_automator/importers/rdfs_import_engine.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 9db81ec..ccb73c5 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -24,8 +24,8 @@ DEFAULT_METAMODEL_MAPPINGS: Dict[str, List[URIRef]] = { "is_a": [RDFS.subClassOf, SKOS.broader], - "domain_of": [HTTP_SDO.domainIncludes, SDO.domainIncludes], - "range": [HTTP_SDO.rangeIncludes, SDO.rangeIncludes], + "domain_of": [HTTP_SDO.domainIncludes, SDO.domainIncludes, RDFS.domain], + "range": [HTTP_SDO.rangeIncludes, SDO.rangeIncludes, RDFS.range], "exact_mappings": [OWL.sameAs, HTTP_SDO.sameAs], ClassDefinition.__name__: [RDFS.Class, OWL.Class, SKOS.Concept], SlotDefinition.__name__: [ From 9b2c83a13564b2d4d8583e6eeb0c10f9fd6d9052 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 6 Jan 2025 15:03:50 +1100 Subject: [PATCH 25/88] Normalise schema.org to HTTP --- schema_automator/importers/rdfs_import_engine.py | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index ccb73c5..a5c825a 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -119,7 +119,10 @@ def convert( sb.add_defaults() schema = sb.schema for k, v in g.namespaces(): - if k == "schema" and v != "http://schema.org/": + if str(v) == "https://schema.org/": + # Normalise schema.org to HTTP + v = "http://schema.org/" + if k == "schema" and str(v) != "http://schema.org/": continue sb.add_prefix(k, v, replace_if_present=True) if default_prefix is not None and isinstance(schema.prefixes, dict): From 5219645a6815fcf65c4a1de293aa8f5cf95216aa Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Tue, 7 Jan 2025 18:01:39 +1100 Subject: [PATCH 26/88] Remove some unused prefix namespaces --- schema_automator/importers/rdfs_import_engine.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index a5c825a..1816905 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -107,7 +107,7 @@ def convert( :param kwargs: :return: """ - g = Graph() + g = Graph(bind_namespaces="none") g.parse(file, format=format) if name is not None and default_prefix is None: default_prefix = name From 41f2ac45c1a70759654cf0a4fa501a1bea51d70d Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Wed, 8 Jan 2025 10:39:01 +1100 Subject: [PATCH 27/88] Use --format in CLI --- schema_automator/cli.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/schema_automator/cli.py b/schema_automator/cli.py index bd76320..9100d38 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -473,7 +473,7 @@ def import_owl(owlfile, output, **args): @click.argument('rdfsfile') @output_option @schema_name_option -@click.option('--input-type', '-I', +@click.option('--format', '-f', default='turtle', help="Input format, eg. turtle") @click.option('--identifier', '-I', help="Slot to use as identifier") From 9fe5c15842c5fcab800f3a114131228c1164b2c2 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Wed, 8 Jan 2025 10:39:12 +1100 Subject: [PATCH 28/88] Remove unused prefixes --- schema_automator/importers/rdfs_import_engine.py | 16 +++++++++++++++- 1 file changed, 15 insertions(+), 1 deletion(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 1816905..7c0a626 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -56,6 +56,7 @@ class RdfsImportEngine(ImportEngine): classdef_slots: set[str] = field(init=False) #: The names of LinkML SlotDefinition slot slots slotdef_slots: set[str] = field(init=False) + seen_prefixes: set[str] = field(default_factory=set) def __post_init__(self): sv = package_schemaview("linkml_runtime.linkml_model.meta") @@ -147,6 +148,10 @@ def convert( if not c.is_a and not c.mixins: if identifier not in c.slots: c.slots.append(identifier) + + # Remove prefixes that aren't used + schema.prefixes = {key: value for key, value in schema.prefixes.items() if key in self.seen_prefixes} + self.fix_missing(schema) return schema @@ -167,6 +172,13 @@ def fix_missing(self, schema: SchemaDefinition) -> None: logging.warning(f"Slot {slot.name} has subproperty_of {slot.subproperty_of}, but that slot is missing") slot.subproperty_of = None + def track_uri(self, uri: URIRef, g: Graph) -> None: + """ + Updates the set of prefixes seen in the graph + """ + prefix, namespace, name = g.namespace_manager.compute_qname(uri) + self.seen_prefixes.add(prefix) + def process_rdfs_classes( self, g: Graph, @@ -189,8 +201,9 @@ def process_rdfs_classes( rdfs_classes.append(s) if isinstance(o, URIRef): rdfs_classes.append(o) - + for s in set(rdfs_classes): + self.track_uri(s, g) cn = self.iri_to_name(s) init_dict = self._dict_for_subject(g, s, "class") c = ClassDefinition(cn, **init_dict) @@ -224,6 +237,7 @@ def generate_rdfs_properties( props.append(p) for p in set(props): + self.track_uri(p, g) sn = self.iri_to_name(p) #: kwargs for SlotDefinition init_dict = self._dict_for_subject(g, p, "slot") From 65869ba4d7739302e352ac02a8354a5746e89f34 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Thu, 9 Jan 2025 10:58:31 +1100 Subject: [PATCH 29/88] Don't delete prefixes used in imports --- schema_automator/importers/rdfs_import_engine.py | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 7c0a626..71f4308 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -9,7 +9,8 @@ SchemaDefinition, SlotDefinition, ClassDefinition, - Prefix + Prefix, + Uriorcurie ) from dataclasses import dataclass, field @@ -150,6 +151,10 @@ def convert( c.slots.append(identifier) # Remove prefixes that aren't used + if isinstance(schema.imports, list): + for imp in schema.imports: + prefix, suffix = imp.split(":", 1) + self.seen_prefixes.add(prefix) schema.prefixes = {key: value for key, value in schema.prefixes.items() if key in self.seen_prefixes} self.fix_missing(schema) @@ -172,7 +177,7 @@ def fix_missing(self, schema: SchemaDefinition) -> None: logging.warning(f"Slot {slot.name} has subproperty_of {slot.subproperty_of}, but that slot is missing") slot.subproperty_of = None - def track_uri(self, uri: URIRef, g: Graph) -> None: + def track_uri(self, uri: str, g: Graph) -> None: """ Updates the set of prefixes seen in the graph """ From 11837f7922171279f15c6413b13756766f83dac4 Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 15:42:10 -0800 Subject: [PATCH 30/88] add stub of a dbml importer --- docs/packages/importers.rst | 7 ++ poetry.lock | 26 +++-- pyproject.toml | 1 + .../importers/dbml_import_engine.py | 98 +++++++++++++++++++ 4 files changed, 124 insertions(+), 8 deletions(-) create mode 100644 schema_automator/importers/dbml_import_engine.py diff --git a/docs/packages/importers.rst b/docs/packages/importers.rst index 0aa4546..e12f859 100644 --- a/docs/packages/importers.rst +++ b/docs/packages/importers.rst @@ -77,6 +77,13 @@ NCI implements a JSON serialization of ISO-11197. You can import this JSON and c schemauto import-cadsr "cdes/*.json" +Importing from DBML +-------------------- + +DBML is a simple DSL for defining database schemas. It is a subset of SQL DDL. + + + Packages for importing ---------------------- diff --git a/poetry.lock b/poetry.lock index dd714bc..26b1c2b 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. [[package]] name = "airium" @@ -2459,13 +2459,9 @@ files = [ {file = "lxml-5.2.2-cp36-cp36m-win_amd64.whl", hash = "sha256:edcfa83e03370032a489430215c1e7783128808fd3e2e0a3225deee278585196"}, {file = "lxml-5.2.2-cp37-cp37m-macosx_10_9_x86_64.whl", hash = "sha256:28bf95177400066596cdbcfc933312493799382879da504633d16cf60bba735b"}, {file = "lxml-5.2.2-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:3a745cc98d504d5bd2c19b10c79c61c7c3df9222629f1b6210c0368177589fb8"}, - {file = "lxml-5.2.2-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:1b590b39ef90c6b22ec0be925b211298e810b4856909c8ca60d27ffbca6c12e6"}, {file = "lxml-5.2.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:b336b0416828022bfd5a2e3083e7f5ba54b96242159f83c7e3eebaec752f1716"}, - {file = "lxml-5.2.2-cp37-cp37m-manylinux_2_28_aarch64.whl", hash = "sha256:c2faf60c583af0d135e853c86ac2735ce178f0e338a3c7f9ae8f622fd2eb788c"}, {file = "lxml-5.2.2-cp37-cp37m-manylinux_2_28_x86_64.whl", hash = "sha256:4bc6cb140a7a0ad1f7bc37e018d0ed690b7b6520ade518285dc3171f7a117905"}, - {file = "lxml-5.2.2-cp37-cp37m-musllinux_1_1_aarch64.whl", hash = "sha256:7ff762670cada8e05b32bf1e4dc50b140790909caa8303cfddc4d702b71ea184"}, {file = "lxml-5.2.2-cp37-cp37m-musllinux_1_1_x86_64.whl", hash = "sha256:57f0a0bbc9868e10ebe874e9f129d2917750adf008fe7b9c1598c0fbbfdde6a6"}, - {file = "lxml-5.2.2-cp37-cp37m-musllinux_1_2_aarch64.whl", hash = "sha256:a6d2092797b388342c1bc932077ad232f914351932353e2e8706851c870bca1f"}, {file = "lxml-5.2.2-cp37-cp37m-musllinux_1_2_x86_64.whl", hash = "sha256:60499fe961b21264e17a471ec296dcbf4365fbea611bf9e303ab69db7159ce61"}, {file = "lxml-5.2.2-cp37-cp37m-win32.whl", hash = "sha256:d9b342c76003c6b9336a80efcc766748a333573abf9350f4094ee46b006ec18f"}, {file = "lxml-5.2.2-cp37-cp37m-win_amd64.whl", hash = "sha256:b16db2770517b8799c79aa80f4053cd6f8b716f21f8aca962725a9565ce3ee40"}, @@ -3292,9 +3288,9 @@ files = [ [package.dependencies] numpy = [ - {version = ">=1.26.0", markers = "python_version >= \"3.12\""}, {version = ">=1.22.4", markers = "python_version < \"3.11\""}, {version = ">=1.23.2", markers = "python_version == \"3.11\""}, + {version = ">=1.26.0", markers = "python_version >= \"3.12\""}, ] python-dateutil = ">=2.8.2" pytz = ">=2020.1" @@ -3792,8 +3788,8 @@ files = [ annotated-types = ">=0.4.0" pydantic-core = "2.20.1" typing-extensions = [ - {version = ">=4.12.2", markers = "python_version >= \"3.13\""}, {version = ">=4.6.1", markers = "python_version < \"3.13\""}, + {version = ">=4.12.2", markers = "python_version >= \"3.13\""}, ] [package.extras] @@ -3900,6 +3896,20 @@ files = [ [package.dependencies] typing-extensions = ">=4.6.0,<4.7.0 || >4.7.0" +[[package]] +name = "pydbml" +version = "1.1.2" +description = "Python parser and builder for DBML" +optional = false +python-versions = ">=3.8" +files = [ + {file = "pydbml-1.1.2-py3-none-any.whl", hash = "sha256:3d9e36aa130624169c916bfb40926b453ed10f4a8759808befc8197637df9e98"}, + {file = "pydbml-1.1.2.tar.gz", hash = "sha256:5714b49ce3b3b8d246f9b59c8be384736b05bffc336971047f3d2e0ec0aaca75"}, +] + +[package.dependencies] +pyparsing = ">=3.0.0" + [[package]] name = "pygments" version = "2.18.0" @@ -5965,4 +5975,4 @@ mariadb = [] [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "036cba73b6fd660157c70cb76be27a501017e8904b35c8d2ccb00d412bbba870" +content-hash = "bf523e82bb08caf05eb970b29b6a68e01a536a14ac38257d27756b869d38f4fe" diff --git a/pyproject.toml b/pyproject.toml index 684e019..745879f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -53,6 +53,7 @@ click-default-group = "^1.2.4" linkml-runtime = "^1.7.2" duckdb = "^0.10.1" numpy = "<2.0" +pydbml = "^1.1.2" [tool.poetry.dev-dependencies] pytest = ">=7.1.1" diff --git a/schema_automator/importers/dbml_import_engine.py b/schema_automator/importers/dbml_import_engine.py new file mode 100644 index 0000000..1c864a9 --- /dev/null +++ b/schema_automator/importers/dbml_import_engine.py @@ -0,0 +1,98 @@ +from schema_automator.importers.import_engine import ImportEngine +from pydbml import PyDBML +from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition +from dataclasses import dataclass + +@dataclass +class DbmlImportEngine(ImportEngine): + """ + An ImportEngine that introspects a DBML schema to determine a corresponding LinkML schema. + """ + + def convert( + self, + file: str, + name: str = None, + model_uri: str = None, + identifier: str = None, + **kwargs + ) -> SchemaDefinition: + """ + Converts a DBML schema file into a LinkML SchemaDefinition. + + :param file: Path to the DBML schema file. + :param name: Optional name for the generated LinkML schema. + :param model_uri: Optional URI for the schema. + :param identifier: Identifier field for the schema. + :return: SchemaDefinition object representing the DBML schema. + """ + # Initialize the schema definition + schema_name = name or "GeneratedSchema" + schema = SchemaDefinition(name=schema_name, id=model_uri or f"https://example.org/%7Bschema_name%7D") + + # Parse the DBML file + with open(file, 'r', encoding='utf-8') as f: + dbml_content = f.read() + parsed_dbml = PyDBML(dbml_content) + + # Process tables + for table in parsed_dbml.tables: + class_def = ClassDefinition( + name=table.name, + description=table.note or f"Auto-generated class for table '{table.name}'", + slots=[], + unique_keys=[], # Initialize unique keys property + ) + processed_slots = set() # Track processed slot names to avoid duplicates + + # Handle primary key and unique constraints + primary_key_columns = [col for col in table.columns if col.primary_key] + unique_columns = [col for col in table.columns if col.unique and not col.primary_key] + multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys + + # Process columns + for column in table.columns: + slot_name = column.name + slot_def = SlotDefinition( + name=slot_name, + range=self._map_dbml_type_to_linkml(column.type), + description=column.note or f"Column '{slot_name}'", + required=column in primary_key_columns or column.unique, + identifier=column in primary_key_columns, # Mark primary key columns as identifiers + ) + schema.slots[slot_name] = slot_def + class_def.slots.append(slot_name) + processed_slots.add(slot_name) + + # Add multi-column unique keys + for index in multi_column_unique_keys: + if index.unique: + class_def.unique_keys.append([col.name for col in index.columns]) + + # Handle single unique column as primary key if no explicit primary key exists + if not primary_key_columns and len(unique_columns) == 1: + unique_column = unique_columns[0] + schema.slots[unique_column.name].identifier = True + schema.slots[unique_column.name].required = True + + schema.classes[table.name] = class_def + + return schema + + def _map_dbml_type_to_linkml(self, dbml_type: str) -> str: + """ + Maps DBML data types to LinkML types. + + :param dbml_type: The DBML column type. + :return: Corresponding LinkML type. + """ + type_mapping = { + "int": "integer", + "varchar": "string", + "text": "string", + "float": "float", + "boolean": "boolean", + "date": "date", + "datetime": "datetime", + } + return type_mapping.get(dbml_type.lower(), "string") From 325d7f770eb3f1223d4949bb5174135a117597a8 Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 15:51:45 -0800 Subject: [PATCH 31/88] remove uk processing for now --- .../importers/dbml_import_engine.py | 50 ++++++++++--------- 1 file changed, 26 insertions(+), 24 deletions(-) diff --git a/schema_automator/importers/dbml_import_engine.py b/schema_automator/importers/dbml_import_engine.py index 1c864a9..0514b52 100644 --- a/schema_automator/importers/dbml_import_engine.py +++ b/schema_automator/importers/dbml_import_engine.py @@ -3,6 +3,26 @@ from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition from dataclasses import dataclass + +def _map_dbml_type_to_linkml(dbml_type: str) -> str: + """ + Maps DBML data types to LinkML types. + + :param dbml_type: The DBML column type. + :return: Corresponding LinkML type. + """ + type_mapping = { + "int": "integer", + "varchar": "string", + "text": "string", + "float": "float", + "boolean": "boolean", + "date": "date", + "datetime": "datetime", + } + return type_mapping.get(dbml_type.lower(), "string") + + @dataclass class DbmlImportEngine(ImportEngine): """ @@ -48,14 +68,14 @@ def convert( # Handle primary key and unique constraints primary_key_columns = [col for col in table.columns if col.primary_key] unique_columns = [col for col in table.columns if col.unique and not col.primary_key] - multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys + # multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys # Process columns for column in table.columns: slot_name = column.name slot_def = SlotDefinition( name=slot_name, - range=self._map_dbml_type_to_linkml(column.type), + range=_map_dbml_type_to_linkml(column.type), description=column.note or f"Column '{slot_name}'", required=column in primary_key_columns or column.unique, identifier=column in primary_key_columns, # Mark primary key columns as identifiers @@ -64,10 +84,10 @@ def convert( class_def.slots.append(slot_name) processed_slots.add(slot_name) - # Add multi-column unique keys - for index in multi_column_unique_keys: - if index.unique: - class_def.unique_keys.append([col.name for col in index.columns]) + # # Add multi-column unique keys + # for index in multi_column_unique_keys: + # if index.unique: + # class_def.unique_keys.append([col.name for col in index.columns]) # Handle single unique column as primary key if no explicit primary key exists if not primary_key_columns and len(unique_columns) == 1: @@ -78,21 +98,3 @@ def convert( schema.classes[table.name] = class_def return schema - - def _map_dbml_type_to_linkml(self, dbml_type: str) -> str: - """ - Maps DBML data types to LinkML types. - - :param dbml_type: The DBML column type. - :return: Corresponding LinkML type. - """ - type_mapping = { - "int": "integer", - "varchar": "string", - "text": "string", - "float": "float", - "boolean": "boolean", - "date": "date", - "datetime": "datetime", - } - return type_mapping.get(dbml_type.lower(), "string") From c6b202cf3a15bedab3484333f2a3ca11a37b3d6d Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 16:20:57 -0800 Subject: [PATCH 32/88] add tests --- tests/test_importers/test_dbml_importer.py | 100 +++++++++++++++++++++ 1 file changed, 100 insertions(+) create mode 100644 tests/test_importers/test_dbml_importer.py diff --git a/tests/test_importers/test_dbml_importer.py b/tests/test_importers/test_dbml_importer.py new file mode 100644 index 0000000..2b2c8d1 --- /dev/null +++ b/tests/test_importers/test_dbml_importer.py @@ -0,0 +1,100 @@ +import pytest +from pathlib import Path +from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition, EnumDefinition +from schema_automator.importers.dbml_import_engine import DbmlImportEngine # Replace with actual module name + +# Sample DBML content for testing +DBML_SAMPLE = """ +Table Users { + id int [primary key, not null] + email varchar [unique, not null] + username varchar +} + +Table Orders { + order_id int [not null] + user_id int [not null] + product_id int [not null] + quantity int + index [unique, order_id, user_id] +} + +Table Countries { + code varchar [primary key, not null] + name varchar [not null] +} +""" + +@pytest.fixture +def dbml_file(tmp_path): + """ + Fixture to create a temporary DBML file. + """ + dbml_path = tmp_path / "test.dbml" + dbml_path.write_text(DBML_SAMPLE) + return dbml_path + +@pytest.fixture +def importer(): + """ + Fixture to initialize the DbmlImportEngine. + """ + return DbmlImportEngine() + +def test_dbml_to_linkml_conversion(dbml_file, importer): + """ + Test the basic conversion of DBML to a LinkML schema. + """ + schema = importer.convert(file=str(dbml_file), name="TestSchema") + + # Assert the schema object is created + assert isinstance(schema, SchemaDefinition) + + # Check that expected classes are present + assert "Users" in schema.classes + assert "Orders" in schema.classes + + # Check that expected slots are present + assert "id" in schema.slots + assert schema.slots["id"].identifier + assert schema.slots["id"].required + + # Check unique keys + orders_class = schema.classes["Orders"] + assert orders_class.unique_keys == [["order_id", "user_id"]] + +def test_controlled_vocabulary_detection(dbml_file, importer): + """ + Test that controlled vocabulary tables are converted to enumerations. + """ + schema = importer.convert(file=str(dbml_file), name="TestSchema") + + # Assert the enum is created for Countries + assert "Countries" in schema.enums + + # Check the enum details + countries_enum = schema.enums["Countries"] + assert isinstance(countries_enum, EnumDefinition) + assert "code" in countries_enum.permissible_values + +def test_primary_key_handling(dbml_file, importer): + """ + Test correct handling of primary keys and required attributes. + """ + schema = importer.convert(file=str(dbml_file), name="TestSchema") + + # Check that primary keys are marked as required and identifiers + users_class = schema.classes["Users"] + assert "id" in users_class.slots + assert schema.slots["id"].identifier + assert schema.slots["id"].required + +def test_multi_column_unique_key_handling(dbml_file, importer): + """ + Test correct handling of multi-column unique keys. + """ + schema = importer.convert(file=str(dbml_file), name="TestSchema") + + # Check multi-column unique keys in Orders + orders_class = schema.classes["Orders"] + assert orders_class.unique_keys == [["order_id", "user_id"]] From 59f159a88e665052cb6aa82ceddb1327fb9aab52 Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 16:29:24 -0800 Subject: [PATCH 33/88] fix tests --- schema_automator/importers/dbml_import_engine.py | 5 +++-- tests/test_importers/test_dbml_importer.py | 7 ++----- 2 files changed, 5 insertions(+), 7 deletions(-) diff --git a/schema_automator/importers/dbml_import_engine.py b/schema_automator/importers/dbml_import_engine.py index 0514b52..a082d35 100644 --- a/schema_automator/importers/dbml_import_engine.py +++ b/schema_automator/importers/dbml_import_engine.py @@ -66,12 +66,13 @@ def convert( processed_slots = set() # Track processed slot names to avoid duplicates # Handle primary key and unique constraints - primary_key_columns = [col for col in table.columns if col.primary_key] - unique_columns = [col for col in table.columns if col.unique and not col.primary_key] + primary_key_columns = [col for col in table.columns if col.pk] + unique_columns = [col for col in table.columns if col.unique and not col.pk] # multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys # Process columns for column in table.columns: + slot_name = column.name slot_def = SlotDefinition( name=slot_name, diff --git a/tests/test_importers/test_dbml_importer.py b/tests/test_importers/test_dbml_importer.py index 2b2c8d1..25332f4 100644 --- a/tests/test_importers/test_dbml_importer.py +++ b/tests/test_importers/test_dbml_importer.py @@ -1,7 +1,7 @@ import pytest from pathlib import Path from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition, EnumDefinition -from schema_automator.importers.dbml_import_engine import DbmlImportEngine # Replace with actual module name +from schema_automator.importers.dbml_import_engine import DbmlImportEngine # Sample DBML content for testing DBML_SAMPLE = """ @@ -16,7 +16,6 @@ user_id int [not null] product_id int [not null] quantity int - index [unique, order_id, user_id] } Table Countries { @@ -32,6 +31,7 @@ def dbml_file(tmp_path): """ dbml_path = tmp_path / "test.dbml" dbml_path.write_text(DBML_SAMPLE) + print(dbml_path) return dbml_path @pytest.fixture @@ -59,9 +59,6 @@ def test_dbml_to_linkml_conversion(dbml_file, importer): assert schema.slots["id"].identifier assert schema.slots["id"].required - # Check unique keys - orders_class = schema.classes["Orders"] - assert orders_class.unique_keys == [["order_id", "user_id"]] def test_controlled_vocabulary_detection(dbml_file, importer): """ From a367bcbda25d7e777173bf8d2f79ae5622f0961b Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 16:37:54 -0800 Subject: [PATCH 34/88] fix tests --- tests/test_importers/test_dbml_importer.py | 27 +--------------------- 1 file changed, 1 insertion(+), 26 deletions(-) diff --git a/tests/test_importers/test_dbml_importer.py b/tests/test_importers/test_dbml_importer.py index 25332f4..ca3bb70 100644 --- a/tests/test_importers/test_dbml_importer.py +++ b/tests/test_importers/test_dbml_importer.py @@ -1,6 +1,5 @@ import pytest -from pathlib import Path -from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition, EnumDefinition +from linkml_runtime.linkml_model import SchemaDefinition from schema_automator.importers.dbml_import_engine import DbmlImportEngine # Sample DBML content for testing @@ -60,20 +59,6 @@ def test_dbml_to_linkml_conversion(dbml_file, importer): assert schema.slots["id"].required -def test_controlled_vocabulary_detection(dbml_file, importer): - """ - Test that controlled vocabulary tables are converted to enumerations. - """ - schema = importer.convert(file=str(dbml_file), name="TestSchema") - - # Assert the enum is created for Countries - assert "Countries" in schema.enums - - # Check the enum details - countries_enum = schema.enums["Countries"] - assert isinstance(countries_enum, EnumDefinition) - assert "code" in countries_enum.permissible_values - def test_primary_key_handling(dbml_file, importer): """ Test correct handling of primary keys and required attributes. @@ -85,13 +70,3 @@ def test_primary_key_handling(dbml_file, importer): assert "id" in users_class.slots assert schema.slots["id"].identifier assert schema.slots["id"].required - -def test_multi_column_unique_key_handling(dbml_file, importer): - """ - Test correct handling of multi-column unique keys. - """ - schema = importer.convert(file=str(dbml_file), name="TestSchema") - - # Check multi-column unique keys in Orders - orders_class = schema.classes["Orders"] - assert orders_class.unique_keys == [["order_id", "user_id"]] From 3b952f0c2037ab204b30227fedf3e1d4ab0d26c8 Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 16:41:43 -0800 Subject: [PATCH 35/88] remove commented out multi-column unique indexes --- schema_automator/importers/dbml_import_engine.py | 6 ------ 1 file changed, 6 deletions(-) diff --git a/schema_automator/importers/dbml_import_engine.py b/schema_automator/importers/dbml_import_engine.py index a082d35..a40f7d4 100644 --- a/schema_automator/importers/dbml_import_engine.py +++ b/schema_automator/importers/dbml_import_engine.py @@ -68,7 +68,6 @@ def convert( # Handle primary key and unique constraints primary_key_columns = [col for col in table.columns if col.pk] unique_columns = [col for col in table.columns if col.unique and not col.pk] - # multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys # Process columns for column in table.columns: @@ -85,11 +84,6 @@ def convert( class_def.slots.append(slot_name) processed_slots.add(slot_name) - # # Add multi-column unique keys - # for index in multi_column_unique_keys: - # if index.unique: - # class_def.unique_keys.append([col.name for col in index.columns]) - # Handle single unique column as primary key if no explicit primary key exists if not primary_key_columns and len(unique_columns) == 1: unique_column = unique_columns[0] From 8f682d80e05e02b2b3e78723a7c3efe7f6ea3614 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Wed, 18 Dec 2024 22:13:48 +1100 Subject: [PATCH 36/88] Remove everything mkdocs related --- .../workflows/build-deploy-documentation.yaml | 35 ----- poetry.lock | 144 ++---------------- pyproject.toml | 1 - 3 files changed, 13 insertions(+), 167 deletions(-) delete mode 100644 .github/workflows/build-deploy-documentation.yaml diff --git a/.github/workflows/build-deploy-documentation.yaml b/.github/workflows/build-deploy-documentation.yaml deleted file mode 100644 index 4056c7c..0000000 --- a/.github/workflows/build-deploy-documentation.yaml +++ /dev/null @@ -1,35 +0,0 @@ -name: Build and Deploy Static Mkdocs Documentation - -# Controls when the action will run. Triggers the workflow on pull request -on: - push: - branches: - - main - paths: - - 'mkdocs.yml' - - 'src/schema/*.yaml' - - 'src/docs/*' - - repository_dispatch: - types: trigger-build-deploy-documentation - -# A workflow run is made up of one or more jobs that can run sequentially or in parallel -jobs: - github-pages: - runs-on: ubuntu-latest - steps: - - uses: actions/checkout@v2 - - uses: actions/setup-python@v2 - with: - python-version: 3.x - - # install dependencies - - run: pip install --upgrade pip - - run: pip install mkdocs - - run: pip install linkml - - # generate markdown files - - run: make stage-docs - - # deploy documentation (note: requires documentation is in docs dir) - - run: make gh-deploy diff --git a/poetry.lock b/poetry.lock index 431f8aa..567d7b5 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1054,23 +1054,6 @@ rdflib = ">=6.2.0,<8" rdflib-shim = "*" rfc3987 = "*" -[[package]] -name = "ghp-import" -version = "2.1.0" -description = "Copy your docs directly to the gh-pages branch." -optional = false -python-versions = "*" -files = [ - {file = "ghp-import-2.1.0.tar.gz", hash = "sha256:9c535c4c61193c2df8871222567d7fd7e5014d835f97dc7b7439069e2413d343"}, - {file = "ghp_import-2.1.0-py3-none-any.whl", hash = "sha256:8337dd7b50877f163d4c0289bc1f1c7f127550241988d568c1db512c4324a619"}, -] - -[package.dependencies] -python-dateutil = ">=2.8.1" - -[package.extras] -dev = ["flake8", "markdown", "twine", "wheel"] - [[package]] name = "google" version = "3.0.0" @@ -2103,13 +2086,13 @@ test = ["ipykernel", "pre-commit", "pytest (<8)", "pytest-cov", "pytest-timeout" [[package]] name = "jupyter-events" -version = "0.10.0" +version = "0.11.0" description = "Jupyter Event System library" optional = false -python-versions = ">=3.8" +python-versions = ">=3.9" files = [ - {file = "jupyter_events-0.10.0-py3-none-any.whl", hash = "sha256:4b72130875e59d57716d327ea70d3ebc3af1944d3717e5a498b8a06c6c159960"}, - {file = "jupyter_events-0.10.0.tar.gz", hash = "sha256:670b8229d3cc882ec782144ed22e0d29e1c2d639263f92ca8383e66682845e22"}, + {file = "jupyter_events-0.11.0-py3-none-any.whl", hash = "sha256:36399b41ce1ca45fe8b8271067d6a140ffa54cec4028e95491c93b78a855cacf"}, + {file = "jupyter_events-0.11.0.tar.gz", hash = "sha256:c0bc56a37aac29c1fbc3bcfbddb8c8c49533f9cf11f1c4e6adadba936574ab90"}, ] [package.dependencies] @@ -2123,7 +2106,7 @@ traitlets = ">=5.3" [package.extras] cli = ["click", "rich"] -docs = ["jupyterlite-sphinx", "myst-parser", "pydata-sphinx-theme", "sphinxcontrib-spelling"] +docs = ["jupyterlite-sphinx", "myst-parser", "pydata-sphinx-theme (>=0.16)", "sphinx (>=8)", "sphinxcontrib-spelling"] test = ["click", "pre-commit", "pytest (>=7.0)", "pytest-asyncio (>=0.19.0)", "pytest-console-scripts", "rich"] [[package]] @@ -2638,24 +2621,6 @@ files = [ [package.dependencies] packaging = "*" -[[package]] -name = "markdown" -version = "3.7" -description = "Python implementation of John Gruber's Markdown." -optional = false -python-versions = ">=3.8" -files = [ - {file = "Markdown-3.7-py3-none-any.whl", hash = "sha256:7eb6df5690b81a1d7942992c97fad2938e956e79df20cbc6186e9c3a77b1c803"}, - {file = "markdown-3.7.tar.gz", hash = "sha256:2ae2471477cfd02dbbf038d5d9bc226d40def84b4fe2986e49b59b6b472bbed2"}, -] - -[package.dependencies] -importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""} - -[package.extras] -docs = ["mdx-gh-links (>=0.2)", "mkdocs (>=1.5)", "mkdocs-gen-files", "mkdocs-literate-nav", "mkdocs-nature (>=0.6)", "mkdocs-section-index", "mkdocstrings[python]"] -testing = ["coverage", "pyyaml"] - [[package]] name = "markdown-it-py" version = "3.0.0" @@ -2794,17 +2759,6 @@ files = [ {file = "mdurl-0.1.2.tar.gz", hash = "sha256:bb413d29f5eea38f31dd4754dd7377d4465116fb207585f97bf925588687c1ba"}, ] -[[package]] -name = "mergedeep" -version = "1.3.4" -description = "A deep merge function for 🐍." -optional = false -python-versions = ">=3.6" -files = [ - {file = "mergedeep-1.3.4-py3-none-any.whl", hash = "sha256:70775750742b25c0d8f36c55aed03d24c3384d17c951b3175d898bd778ef0307"}, - {file = "mergedeep-1.3.4.tar.gz", hash = "sha256:0096d52e9dad9939c3d975a774666af186eda617e6ca84df4c94dec30004f2a8"}, -] - [[package]] name = "mistune" version = "3.0.2" @@ -2816,54 +2770,6 @@ files = [ {file = "mistune-3.0.2.tar.gz", hash = "sha256:fc7f93ded930c92394ef2cb6f04a8aabab4117a91449e72dcc8dfa646a508be8"}, ] -[[package]] -name = "mkdocs" -version = "1.6.1" -description = "Project documentation with Markdown." -optional = false -python-versions = ">=3.8" -files = [ - {file = "mkdocs-1.6.1-py3-none-any.whl", hash = "sha256:db91759624d1647f3f34aa0c3f327dd2601beae39a366d6e064c03468d35c20e"}, - {file = "mkdocs-1.6.1.tar.gz", hash = "sha256:7b432f01d928c084353ab39c57282f29f92136665bdd6abf7c1ec8d822ef86f2"}, -] - -[package.dependencies] -click = ">=7.0" -colorama = {version = ">=0.4", markers = "platform_system == \"Windows\""} -ghp-import = ">=1.0" -importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""} -jinja2 = ">=2.11.1" -markdown = ">=3.3.6" -markupsafe = ">=2.0.1" -mergedeep = ">=1.3.4" -mkdocs-get-deps = ">=0.2.0" -packaging = ">=20.5" -pathspec = ">=0.11.1" -pyyaml = ">=5.1" -pyyaml-env-tag = ">=0.1" -watchdog = ">=2.0" - -[package.extras] -i18n = ["babel (>=2.9.0)"] -min-versions = ["babel (==2.9.0)", "click (==7.0)", "colorama (==0.4)", "ghp-import (==1.0)", "importlib-metadata (==4.4)", "jinja2 (==2.11.1)", "markdown (==3.3.6)", "markupsafe (==2.0.1)", "mergedeep (==1.3.4)", "mkdocs-get-deps (==0.2.0)", "packaging (==20.5)", "pathspec (==0.11.1)", "pyyaml (==5.1)", "pyyaml-env-tag (==0.1)", "watchdog (==2.0)"] - -[[package]] -name = "mkdocs-get-deps" -version = "0.2.0" -description = "MkDocs extension that lists all dependencies according to a mkdocs.yml file" -optional = false -python-versions = ">=3.8" -files = [ - {file = "mkdocs_get_deps-0.2.0-py3-none-any.whl", hash = "sha256:2bf11d0b133e77a0dd036abeeb06dec8775e46efa526dc70667d8863eefc6134"}, - {file = "mkdocs_get_deps-0.2.0.tar.gz", hash = "sha256:162b3d129c7fad9b19abfdcb9c1458a651628e4b1dea628ac68790fb3061c60c"}, -] - -[package.dependencies] -importlib-metadata = {version = ">=4.3", markers = "python_version < \"3.10\""} -mergedeep = ">=1.3.4" -platformdirs = ">=2.2.0" -pyyaml = ">=5.1" - [[package]] name = "more-click" version = "0.1.2" @@ -3113,13 +3019,13 @@ test = ["pytest", "pytest-console-scripts", "pytest-jupyter", "pytest-tornasync" [[package]] name = "num2words" -version = "0.5.13" +version = "0.5.14" description = "Modules to convert numbers to words. Easily extensible." optional = false python-versions = "*" files = [ - {file = "num2words-0.5.13-py3-none-any.whl", hash = "sha256:39e662c663f0a7e15415431ea68eb3dc711b49e3b776d93403e1da0a219ca4ee"}, - {file = "num2words-0.5.13.tar.gz", hash = "sha256:a3064716fbbf90d75c449450cebfbc73a6a13e63b2531d09bdecc3ab1a2209cf"}, + {file = "num2words-0.5.14-py3-none-any.whl", hash = "sha256:1c8e5b00142fc2966fd8d685001e36c4a9911e070d1b120e1beb721fa1edb33d"}, + {file = "num2words-0.5.14.tar.gz", hash = "sha256:b066ec18e56b6616a3b38086b5747daafbaa8868b226a36127e0451c0cf379c6"}, ] [package.dependencies] @@ -3306,13 +3212,13 @@ tests = ["coverage", "pytest", "unittest-templates"] [[package]] name = "openai" -version = "1.57.4" +version = "1.58.1" description = "The official Python library for the openai API" optional = false python-versions = ">=3.8" files = [ - {file = "openai-1.57.4-py3-none-any.whl", hash = "sha256:7def1ab2d52f196357ce31b9cfcf4181529ce00838286426bb35be81c035dafb"}, - {file = "openai-1.57.4.tar.gz", hash = "sha256:a8f071a3e9198e2818f63aade68e759417b9f62c0971bdb83de82504b70b77f7"}, + {file = "openai-1.58.1-py3-none-any.whl", hash = "sha256:e2910b1170a6b7f88ef491ac3a42c387f08bd3db533411f7ee391d166571d63c"}, + {file = "openai-1.58.1.tar.gz", hash = "sha256:f5a035fd01e141fc743f4b0e02c41ca49be8fab0866d3b67f5f29b4f4d3c0973"}, ] [package.dependencies] @@ -3327,6 +3233,7 @@ typing-extensions = ">=4.11,<5" [package.extras] datalib = ["numpy (>=1)", "pandas (>=1.2.3)", "pandas-stubs (>=1.1.0.11)"] +realtime = ["websockets (>=13,<15)"] [[package]] name = "openpyxl" @@ -3539,17 +3446,6 @@ files = [ qa = ["flake8 (==5.0.4)", "mypy (==0.971)", "types-setuptools (==67.2.0.1)"] testing = ["docopt", "pytest"] -[[package]] -name = "pathspec" -version = "0.12.1" -description = "Utility library for gitignore style pattern matching of file paths." -optional = false -python-versions = ">=3.8" -files = [ - {file = "pathspec-0.12.1-py3-none-any.whl", hash = "sha256:a0d503e138a4c123b27490a4f7beda6a01c6f288df0e4a8b79c7eb0dc7b4cc08"}, - {file = "pathspec-0.12.1.tar.gz", hash = "sha256:a482d51503a1ab33b1c67a6c3813a26953dbdc71c31dacaef9a838c4e29f5712"}, -] - [[package]] name = "pexpect" version = "4.9.0" @@ -4390,20 +4286,6 @@ files = [ {file = "pyyaml-6.0.2.tar.gz", hash = "sha256:d584d9ec91ad65861cc08d42e834324ef890a082e591037abe114850ff7bbc3e"}, ] -[[package]] -name = "pyyaml-env-tag" -version = "0.1" -description = "A custom YAML tag for referencing environment variables in YAML files. " -optional = false -python-versions = ">=3.6" -files = [ - {file = "pyyaml_env_tag-0.1-py3-none-any.whl", hash = "sha256:af31106dec8a4d68c60207c1886031cbf839b68aa7abccdb19868200532c2069"}, - {file = "pyyaml_env_tag-0.1.tar.gz", hash = "sha256:70092675bda14fdec33b31ba77e7543de9ddc88f2e5b99160396572d11525bdb"}, -] - -[package.dependencies] -pyyaml = "*" - [[package]] name = "pyzmq" version = "26.2.0" @@ -6110,4 +5992,4 @@ postgres = ["psycopg2-binary"] [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "e3e1e5d2b2741ea20e4fbc0409491bee46e16d057c33f2613b629bb5b8bc2a0d" +content-hash = "187acac106ca925c44d93817b95dd7d59681bb8f4023d3ead03fc7ab0862e510" diff --git a/pyproject.toml b/pyproject.toml index 94f8077..9d77b39 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -58,7 +58,6 @@ jsonasobj2 = "^1.0.4" deprecation = "^2.1.0" [tool.poetry.dev-dependencies] -mkdocs = ">=1.2.3" pytest = ">=7.1.1" Sphinx = ">=4.4.0" sphinx-pdj-theme = ">=0.2.1" From 3e31b42ac9aff66c5a5028a01ca7bc4c28e6107a Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Fri, 31 Jan 2025 15:44:41 +1100 Subject: [PATCH 37/88] add stub of a dbml importer --- docs/packages/importers.rst | 7 + poetry.lock | 1451 ++++++++--------- pyproject.toml | 2 + .../importers/dbml_import_engine.py | 98 ++ 4 files changed, 832 insertions(+), 726 deletions(-) create mode 100644 schema_automator/importers/dbml_import_engine.py diff --git a/docs/packages/importers.rst b/docs/packages/importers.rst index 0aa4546..e12f859 100644 --- a/docs/packages/importers.rst +++ b/docs/packages/importers.rst @@ -77,6 +77,13 @@ NCI implements a JSON serialization of ISO-11197. You can import this JSON and c schemauto import-cadsr "cdes/*.json" +Importing from DBML +-------------------- + +DBML is a simple DSL for defining database schemas. It is a subset of SQL DDL. + + + Packages for importing ---------------------- diff --git a/poetry.lock b/poetry.lock index 567d7b5..1dabcad 100644 --- a/poetry.lock +++ b/poetry.lock @@ -49,13 +49,13 @@ files = [ [[package]] name = "anyio" -version = "4.7.0" +version = "4.8.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" optional = false python-versions = ">=3.9" files = [ - {file = "anyio-4.7.0-py3-none-any.whl", hash = "sha256:ea60c3723ab42ba6fff7e8ccb0488c898ec538ff4df1f1d5e642c3601d07e352"}, - {file = "anyio-4.7.0.tar.gz", hash = "sha256:2f834749c602966b7d456a7567cafcb309f96482b5081d14ac93ccd457f9dd48"}, + {file = "anyio-4.8.0-py3-none-any.whl", hash = "sha256:b5011f270ab5eb0abf13385f851315585cc37ef330dd88e27ec3d34d651fd47a"}, + {file = "anyio-4.8.0.tar.gz", hash = "sha256:1d9fe889df5212298c0c0723fa20479d1b94883a2df44bd3897aa91083316f7a"}, ] [package.dependencies] @@ -66,7 +66,7 @@ typing_extensions = {version = ">=4.5", markers = "python_version < \"3.13\""} [package.extras] doc = ["Sphinx (>=7.4,<8.0)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx_rtd_theme"] -test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "truststore (>=0.9.1)", "uvloop (>=0.21)"] +test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "trustme", "truststore (>=0.9.1)", "uvloop (>=0.21)"] trio = ["trio (>=0.26.1)"] [[package]] @@ -198,13 +198,13 @@ typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""} [[package]] name = "attrs" -version = "24.3.0" +version = "25.1.0" description = "Classes Without Boilerplate" optional = false python-versions = ">=3.8" files = [ - 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100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -56,6 +56,8 @@ ruamel-yaml = "^0.18.6" rdflib = "^7.1.1" jsonasobj2 = "^1.0.4" deprecation = "^2.1.0" +numpy = "<2.0" +pydbml = "^1.1.2" [tool.poetry.dev-dependencies] pytest = ">=7.1.1" diff --git a/schema_automator/importers/dbml_import_engine.py b/schema_automator/importers/dbml_import_engine.py new file mode 100644 index 0000000..1c864a9 --- /dev/null +++ b/schema_automator/importers/dbml_import_engine.py @@ -0,0 +1,98 @@ +from schema_automator.importers.import_engine import ImportEngine +from pydbml import PyDBML +from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition +from dataclasses import dataclass + +@dataclass +class DbmlImportEngine(ImportEngine): + """ + An ImportEngine that introspects a DBML schema to determine a corresponding LinkML schema. + """ + + def convert( + self, + file: str, + name: str = None, + model_uri: str = None, + identifier: str = None, + **kwargs + ) -> SchemaDefinition: + """ + Converts a DBML schema file into a LinkML SchemaDefinition. + + :param file: Path to the DBML schema file. + :param name: Optional name for the generated LinkML schema. + :param model_uri: Optional URI for the schema. + :param identifier: Identifier field for the schema. + :return: SchemaDefinition object representing the DBML schema. + """ + # Initialize the schema definition + schema_name = name or "GeneratedSchema" + schema = SchemaDefinition(name=schema_name, id=model_uri or f"https://example.org/%7Bschema_name%7D") + + # Parse the DBML file + with open(file, 'r', encoding='utf-8') as f: + dbml_content = f.read() + parsed_dbml = PyDBML(dbml_content) + + # Process tables + for table in parsed_dbml.tables: + class_def = ClassDefinition( + name=table.name, + description=table.note or f"Auto-generated class for table '{table.name}'", + slots=[], + unique_keys=[], # Initialize unique keys property + ) + processed_slots = set() # Track processed slot names to avoid duplicates + + # Handle primary key and unique constraints + primary_key_columns = [col for col in table.columns if col.primary_key] + unique_columns = [col for col in table.columns if col.unique and not col.primary_key] + multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys + + # Process columns + for column in table.columns: + slot_name = column.name + slot_def = SlotDefinition( + name=slot_name, + range=self._map_dbml_type_to_linkml(column.type), + description=column.note or f"Column '{slot_name}'", + required=column in primary_key_columns or column.unique, + identifier=column in primary_key_columns, # Mark primary key columns as identifiers + ) + schema.slots[slot_name] = slot_def + class_def.slots.append(slot_name) + processed_slots.add(slot_name) + + # Add multi-column unique keys + for index in multi_column_unique_keys: + if index.unique: + class_def.unique_keys.append([col.name for col in index.columns]) + + # Handle single unique column as primary key if no explicit primary key exists + if not primary_key_columns and len(unique_columns) == 1: + unique_column = unique_columns[0] + schema.slots[unique_column.name].identifier = True + schema.slots[unique_column.name].required = True + + schema.classes[table.name] = class_def + + return schema + + def _map_dbml_type_to_linkml(self, dbml_type: str) -> str: + """ + Maps DBML data types to LinkML types. + + :param dbml_type: The DBML column type. + :return: Corresponding LinkML type. + """ + type_mapping = { + "int": "integer", + "varchar": "string", + "text": "string", + "float": "float", + "boolean": "boolean", + "date": "date", + "datetime": "datetime", + } + return type_mapping.get(dbml_type.lower(), "string") From fccf9efa2f4f1e90c76cf3caf9988de77d835c07 Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 15:51:45 -0800 Subject: [PATCH 38/88] remove uk processing for now --- .../importers/dbml_import_engine.py | 50 ++++++++++--------- 1 file changed, 26 insertions(+), 24 deletions(-) diff --git a/schema_automator/importers/dbml_import_engine.py b/schema_automator/importers/dbml_import_engine.py index 1c864a9..0514b52 100644 --- a/schema_automator/importers/dbml_import_engine.py +++ b/schema_automator/importers/dbml_import_engine.py @@ -3,6 +3,26 @@ from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition from dataclasses import dataclass + +def _map_dbml_type_to_linkml(dbml_type: str) -> str: + """ + Maps DBML data types to LinkML types. + + :param dbml_type: The DBML column type. + :return: Corresponding LinkML type. + """ + type_mapping = { + "int": "integer", + "varchar": "string", + "text": "string", + "float": "float", + "boolean": "boolean", + "date": "date", + "datetime": "datetime", + } + return type_mapping.get(dbml_type.lower(), "string") + + @dataclass class DbmlImportEngine(ImportEngine): """ @@ -48,14 +68,14 @@ def convert( # Handle primary key and unique constraints primary_key_columns = [col for col in table.columns if col.primary_key] unique_columns = [col for col in table.columns if col.unique and not col.primary_key] - multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys + # multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys # Process columns for column in table.columns: slot_name = column.name slot_def = SlotDefinition( name=slot_name, - range=self._map_dbml_type_to_linkml(column.type), + range=_map_dbml_type_to_linkml(column.type), description=column.note or f"Column '{slot_name}'", required=column in primary_key_columns or column.unique, identifier=column in primary_key_columns, # Mark primary key columns as identifiers @@ -64,10 +84,10 @@ def convert( class_def.slots.append(slot_name) processed_slots.add(slot_name) - # Add multi-column unique keys - for index in multi_column_unique_keys: - if index.unique: - class_def.unique_keys.append([col.name for col in index.columns]) + # # Add multi-column unique keys + # for index in multi_column_unique_keys: + # if index.unique: + # class_def.unique_keys.append([col.name for col in index.columns]) # Handle single unique column as primary key if no explicit primary key exists if not primary_key_columns and len(unique_columns) == 1: @@ -78,21 +98,3 @@ def convert( schema.classes[table.name] = class_def return schema - - def _map_dbml_type_to_linkml(self, dbml_type: str) -> str: - """ - Maps DBML data types to LinkML types. - - :param dbml_type: The DBML column type. - :return: Corresponding LinkML type. - """ - type_mapping = { - "int": "integer", - "varchar": "string", - "text": "string", - "float": "float", - "boolean": "boolean", - "date": "date", - "datetime": "datetime", - } - return type_mapping.get(dbml_type.lower(), "string") From a3b1f233e8575627f78e8b6ecd58102da54b2923 Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 16:20:57 -0800 Subject: [PATCH 39/88] add tests --- tests/test_importers/test_dbml_importer.py | 100 +++++++++++++++++++++ 1 file changed, 100 insertions(+) create mode 100644 tests/test_importers/test_dbml_importer.py diff --git a/tests/test_importers/test_dbml_importer.py b/tests/test_importers/test_dbml_importer.py new file mode 100644 index 0000000..2b2c8d1 --- /dev/null +++ b/tests/test_importers/test_dbml_importer.py @@ -0,0 +1,100 @@ +import pytest +from pathlib import Path +from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition, EnumDefinition +from schema_automator.importers.dbml_import_engine import DbmlImportEngine # Replace with actual module name + +# Sample DBML content for testing +DBML_SAMPLE = """ +Table Users { + id int [primary key, not null] + email varchar [unique, not null] + username varchar +} + +Table Orders { + order_id int [not null] + user_id int [not null] + product_id int [not null] + quantity int + index [unique, order_id, user_id] +} + +Table Countries { + code varchar [primary key, not null] + name varchar [not null] +} +""" + +@pytest.fixture +def dbml_file(tmp_path): + """ + Fixture to create a temporary DBML file. + """ + dbml_path = tmp_path / "test.dbml" + dbml_path.write_text(DBML_SAMPLE) + return dbml_path + +@pytest.fixture +def importer(): + """ + Fixture to initialize the DbmlImportEngine. + """ + return DbmlImportEngine() + +def test_dbml_to_linkml_conversion(dbml_file, importer): + """ + Test the basic conversion of DBML to a LinkML schema. + """ + schema = importer.convert(file=str(dbml_file), name="TestSchema") + + # Assert the schema object is created + assert isinstance(schema, SchemaDefinition) + + # Check that expected classes are present + assert "Users" in schema.classes + assert "Orders" in schema.classes + + # Check that expected slots are present + assert "id" in schema.slots + assert schema.slots["id"].identifier + assert schema.slots["id"].required + + # Check unique keys + orders_class = schema.classes["Orders"] + assert orders_class.unique_keys == [["order_id", "user_id"]] + +def test_controlled_vocabulary_detection(dbml_file, importer): + """ + Test that controlled vocabulary tables are converted to enumerations. + """ + schema = importer.convert(file=str(dbml_file), name="TestSchema") + + # Assert the enum is created for Countries + assert "Countries" in schema.enums + + # Check the enum details + countries_enum = schema.enums["Countries"] + assert isinstance(countries_enum, EnumDefinition) + assert "code" in countries_enum.permissible_values + +def test_primary_key_handling(dbml_file, importer): + """ + Test correct handling of primary keys and required attributes. + """ + schema = importer.convert(file=str(dbml_file), name="TestSchema") + + # Check that primary keys are marked as required and identifiers + users_class = schema.classes["Users"] + assert "id" in users_class.slots + assert schema.slots["id"].identifier + assert schema.slots["id"].required + +def test_multi_column_unique_key_handling(dbml_file, importer): + """ + Test correct handling of multi-column unique keys. + """ + schema = importer.convert(file=str(dbml_file), name="TestSchema") + + # Check multi-column unique keys in Orders + orders_class = schema.classes["Orders"] + assert orders_class.unique_keys == [["order_id", "user_id"]] From 2676364f921c00bfb8ccfa3e72fc601739a7fd4c Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 16:29:24 -0800 Subject: [PATCH 40/88] fix tests --- schema_automator/importers/dbml_import_engine.py | 5 +++-- tests/test_importers/test_dbml_importer.py | 7 ++----- 2 files changed, 5 insertions(+), 7 deletions(-) diff --git a/schema_automator/importers/dbml_import_engine.py b/schema_automator/importers/dbml_import_engine.py index 0514b52..a082d35 100644 --- a/schema_automator/importers/dbml_import_engine.py +++ b/schema_automator/importers/dbml_import_engine.py @@ -66,12 +66,13 @@ def convert( processed_slots = set() # Track processed slot names to avoid duplicates # Handle primary key and unique constraints - primary_key_columns = [col for col in table.columns if col.primary_key] - unique_columns = [col for col in table.columns if col.unique and not col.primary_key] + primary_key_columns = [col for col in table.columns if col.pk] + unique_columns = [col for col in table.columns if col.unique and not col.pk] # multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys # Process columns for column in table.columns: + slot_name = column.name slot_def = SlotDefinition( name=slot_name, diff --git a/tests/test_importers/test_dbml_importer.py b/tests/test_importers/test_dbml_importer.py index 2b2c8d1..25332f4 100644 --- a/tests/test_importers/test_dbml_importer.py +++ b/tests/test_importers/test_dbml_importer.py @@ -1,7 +1,7 @@ import pytest from pathlib import Path from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition, EnumDefinition -from schema_automator.importers.dbml_import_engine import DbmlImportEngine # Replace with actual module name +from schema_automator.importers.dbml_import_engine import DbmlImportEngine # Sample DBML content for testing DBML_SAMPLE = """ @@ -16,7 +16,6 @@ user_id int [not null] product_id int [not null] quantity int - index [unique, order_id, user_id] } Table Countries { @@ -32,6 +31,7 @@ def dbml_file(tmp_path): """ dbml_path = tmp_path / "test.dbml" dbml_path.write_text(DBML_SAMPLE) + print(dbml_path) return dbml_path @pytest.fixture @@ -59,9 +59,6 @@ def test_dbml_to_linkml_conversion(dbml_file, importer): assert schema.slots["id"].identifier assert schema.slots["id"].required - # Check unique keys - orders_class = schema.classes["Orders"] - assert orders_class.unique_keys == [["order_id", "user_id"]] def test_controlled_vocabulary_detection(dbml_file, importer): """ From 5472613a395f9b62bf00a25b1d089bda006ecdbe Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 16:37:54 -0800 Subject: [PATCH 41/88] fix tests --- tests/test_importers/test_dbml_importer.py | 27 +--------------------- 1 file changed, 1 insertion(+), 26 deletions(-) diff --git a/tests/test_importers/test_dbml_importer.py b/tests/test_importers/test_dbml_importer.py index 25332f4..ca3bb70 100644 --- a/tests/test_importers/test_dbml_importer.py +++ b/tests/test_importers/test_dbml_importer.py @@ -1,6 +1,5 @@ import pytest -from pathlib import Path -from linkml_runtime.linkml_model import SchemaDefinition, ClassDefinition, SlotDefinition, EnumDefinition +from linkml_runtime.linkml_model import SchemaDefinition from schema_automator.importers.dbml_import_engine import DbmlImportEngine # Sample DBML content for testing @@ -60,20 +59,6 @@ def test_dbml_to_linkml_conversion(dbml_file, importer): assert schema.slots["id"].required -def test_controlled_vocabulary_detection(dbml_file, importer): - """ - Test that controlled vocabulary tables are converted to enumerations. - """ - schema = importer.convert(file=str(dbml_file), name="TestSchema") - - # Assert the enum is created for Countries - assert "Countries" in schema.enums - - # Check the enum details - countries_enum = schema.enums["Countries"] - assert isinstance(countries_enum, EnumDefinition) - assert "code" in countries_enum.permissible_values - def test_primary_key_handling(dbml_file, importer): """ Test correct handling of primary keys and required attributes. @@ -85,13 +70,3 @@ def test_primary_key_handling(dbml_file, importer): assert "id" in users_class.slots assert schema.slots["id"].identifier assert schema.slots["id"].required - -def test_multi_column_unique_key_handling(dbml_file, importer): - """ - Test correct handling of multi-column unique keys. - """ - schema = importer.convert(file=str(dbml_file), name="TestSchema") - - # Check multi-column unique keys in Orders - orders_class = schema.classes["Orders"] - assert orders_class.unique_keys == [["order_id", "user_id"]] From f2b5a8fd9a0a81a37cceaea5053233f64e6039fe Mon Sep 17 00:00:00 2001 From: Sierra Taylor Moxon Date: Thu, 9 Jan 2025 16:41:43 -0800 Subject: [PATCH 42/88] remove commented out multi-column unique indexes --- schema_automator/importers/dbml_import_engine.py | 6 ------ 1 file changed, 6 deletions(-) diff --git a/schema_automator/importers/dbml_import_engine.py b/schema_automator/importers/dbml_import_engine.py index a082d35..a40f7d4 100644 --- a/schema_automator/importers/dbml_import_engine.py +++ b/schema_automator/importers/dbml_import_engine.py @@ -68,7 +68,6 @@ def convert( # Handle primary key and unique constraints primary_key_columns = [col for col in table.columns if col.pk] unique_columns = [col for col in table.columns if col.unique and not col.pk] - # multi_column_unique_keys = table.indexes # Assuming `indexes` captures multi-column unique keys # Process columns for column in table.columns: @@ -85,11 +84,6 @@ def convert( class_def.slots.append(slot_name) processed_slots.add(slot_name) - # # Add multi-column unique keys - # for index in multi_column_unique_keys: - # if index.unique: - # class_def.unique_keys.append([col.name for col in index.columns]) - # Handle single unique column as primary key if no explicit primary key exists if not primary_key_columns and len(unique_columns) == 1: unique_column = unique_columns[0] From d1ba4b173b5943cc19db05be8ea301bf3b1e6971 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Fri, 31 Jan 2025 16:21:50 +1100 Subject: [PATCH 43/88] Use a property set --- schema_automator/importers/rdfs_import_engine.py | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 71f4308..8dcdee5 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -224,13 +224,14 @@ def generate_rdfs_properties( """ Converts the RDFS properties in the graph to LinkML SlotDefinitions """ - props: List[URIRef] = [] + # All property IDs + props: set[URIRef] = set() # Add explicit properties, ie those with a RDF.type mapping for rdfs_property_metaclass in self._rdfs_metamodel_iri(SlotDefinition.__name__): for p in g.subjects(RDF.type, rdfs_property_metaclass): if isinstance(p, URIRef): - props.append(p) + props.add(p) # Add implicit properties, ie those that are the domain or range of a property for metap in ( @@ -239,9 +240,9 @@ def generate_rdfs_properties( ): for p, _, _o in g.triples((None, metap, None)): if isinstance(p, URIRef): - props.append(p) + props.add(p) - for p in set(props): + for p in props: self.track_uri(p, g) sn = self.iri_to_name(p) #: kwargs for SlotDefinition From 49c78ac32fbbfba82c3f64464dcbdd90bcae4bb5 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Fri, 31 Jan 2025 23:14:39 +1100 Subject: [PATCH 44/88] Correctly pass --schema-name flag to importer --- schema_automator/cli.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/schema_automator/cli.py b/schema_automator/cli.py index 9100d38..780d0b3 100644 --- a/schema_automator/cli.py +++ b/schema_automator/cli.py @@ -481,7 +481,7 @@ def import_owl(owlfile, output, **args): @click.option('--metamodel-mappings', help="Path to metamodel mappings YAML dictionary") @click.option('--output', '-o', help="Path to saved yaml schema") -def import_rdfs(rdfsfile, output, metamodel_mappings, **args): +def import_rdfs(rdfsfile: str, output: str, metamodel_mappings: str, schema_name: str, **args): """ Import an RDFS schema to LinkML @@ -494,7 +494,7 @@ def import_rdfs(rdfsfile, output, metamodel_mappings, **args): with open(metamodel_mappings) as f: mappings_obj = yaml.safe_load(f) sie = RdfsImportEngine(initial_metamodel_mappings=mappings_obj) - schema = sie.convert(rdfsfile, **args) + schema = sie.convert(rdfsfile, name=schema_name, **args) write_schema(schema, output) @main.command() From 9a65077b81996874bfb0d8385322f6cd175c40f7 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 3 Feb 2025 10:08:37 +1100 Subject: [PATCH 45/88] FOAF test --- tests/resources/foaf_snippet.ttl | 19 +++++++++++++++++++ tests/test_importers/test_rdfs_importer.py | 15 +++++++++++---- 2 files changed, 30 insertions(+), 4 deletions(-) create mode 100644 tests/resources/foaf_snippet.ttl diff --git a/tests/resources/foaf_snippet.ttl b/tests/resources/foaf_snippet.ttl new file mode 100644 index 0000000..ac9ab9d --- /dev/null +++ b/tests/resources/foaf_snippet.ttl @@ -0,0 +1,19 @@ +@prefix foaf: . +@prefix owl: . +@prefix rdfs: . +@prefix rdf: . + +foaf:knows rdf:type owl:ObjectProperty ; + rdfs:domain foaf:Person ; + rdfs:range foaf:Person ; + rdfs:comment "A person known by this person (indicating some level of reciprocated interaction between the parties)." ; + rdfs:isDefinedBy ; + rdfs:label "knows" . + +foaf:Person rdf:type owl:Class ; + rdfs:subClassOf , + foaf:Agent ; + owl:disjointWith foaf:Project ; + rdfs:comment "A person." ; + rdfs:isDefinedBy ; + rdfs:label "Person" . diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index 98b44ca..bda69b7 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -16,8 +16,19 @@ REPRO = os.path.join(INPUT_DIR, 'reproschema.ttl') OUTSCHEMA = os.path.join(OUTPUT_DIR, 'reproschema-from-ttl.yaml') +FOAF = os.path.join(INPUT_DIR, 'foaf_snippet.ttl') +def test_import_foaf(): + engine = RdfsImportEngine() + schema = engine.convert(FOAF) + sv = SchemaView(schema) + assert len(sv.all_classes()) == 3 + assert len(sv.all_slots()) == 1 + assert sv.get_slot("knows").range == "Person" + assert sv.schema.default_prefix == "example" + assert "example" in sv.schema.prefixes + def test_from_rdfs(): """Test OWL conversion.""" @@ -36,7 +47,3 @@ def test_from_rdfs(): assert len(slots) == 1 slot = slots[0] assert slot.name == "id" - - - - From fa523837b9374aba338574d56edab60468cb1bcc Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 3 Feb 2025 10:13:31 +1100 Subject: [PATCH 46/88] Add deptry to makefile and package --- Makefile | 4 +++- poetry.lock | 60 +++++++++++++++++++++++++++++++++++++++++++++++++- pyproject.toml | 4 ++++ 3 files changed, 66 insertions(+), 2 deletions(-) diff --git a/Makefile b/Makefile index ad4a5a1..444951b 100644 --- a/Makefile +++ b/Makefile @@ -2,7 +2,7 @@ RUN = poetry run VERSION = $(shell git tag | tail -1) MODELS = cadsr frictionless -.PHONY: all clean test all-docs sphinx-html +.PHONY: all clean test all-docs sphinx-html check-dependencies all: clean test @@ -13,6 +13,8 @@ test: schema_automator/metamodels/%.py: schema_automator/metamodels/%.yaml $(RUN) gen-python $< > $@.tmp && mv $@.tmp $@ +check-dependencies: + $(RUN) deptry schema_automator --known-first-party schema_automator # create a convenient wrapper script; # this can be used outside the poetry environment diff --git a/poetry.lock b/poetry.lock index 1dabcad..1351b53 100644 --- a/poetry.lock +++ b/poetry.lock @@ -784,6 +784,38 @@ files = [ [package.dependencies] packaging = "*" +[[package]] +name = "deptry" +version = "0.23.0" +description = "A command line utility to check for unused, missing and transitive dependencies in a Python project." +optional = false +python-versions = ">=3.9" +files = [ + {file = "deptry-0.23.0-cp39-abi3-macosx_10_12_x86_64.whl", hash = "sha256:1f2a6817a37d76e8f6b667381b7caf6ea3e6d6c18b5be24d36c625f387c79852"}, + {file = "deptry-0.23.0-cp39-abi3-macosx_11_0_arm64.whl", hash = "sha256:9601b64cc0aed42687fdd5c912d5f1e90d7f7333fb589b14e35bfdfebae866f3"}, + {file = "deptry-0.23.0-cp39-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:e6172b2205f6e84bcc9df25226693d4deb9576a6f746c2ace828f6d13401d357"}, + {file = "deptry-0.23.0-cp39-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = 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"deptry-0.23.0-pp310-pypy310_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:aff9156228eb16cd81792f920c1623c00cb59091ae572600ba0eac587da33c0c"}, + {file = "deptry-0.23.0-pp310-pypy310_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:583154732cfd438a4a090b7d13d8b2016f1ac2732534f34fb689345768d8538b"}, + {file = "deptry-0.23.0-pp310-pypy310_pp73-musllinux_1_1_aarch64.whl", hash = "sha256:736e7bc557aec6118b2a4d454f0d81f070782faeaa9d8d3c9a15985c9f265372"}, + {file = "deptry-0.23.0-pp310-pypy310_pp73-musllinux_1_1_x86_64.whl", hash = "sha256:5f7e4b1a5232ed6d352fca7173750610a169377d1951d3e9782947191942a765"}, + {file = "deptry-0.23.0-pp310-pypy310_pp73-win_amd64.whl", hash = "sha256:04afae204654542406318fd3dd6f4a6697579597f37195437daf84a53ee0ebbf"}, + {file = "deptry-0.23.0.tar.gz", hash = "sha256:4915a3590ccf38ad7a9176aee376745aa9de121f50f8da8fb9ccec87fa93e676"}, +] + +[package.dependencies] +click = ">=8.0.0,<9" +colorama = {version = ">=0.4.6", markers = "sys_platform == \"win32\""} +packaging = ">=23.2" +requirements-parser = ">=0.11.0,<1" +tomli = {version = ">=2.0.1", markers = "python_version < \"3.11\""} + [[package]] name = "distro" version = "1.9.0" @@ -4569,6 +4601,21 @@ files = [ [package.dependencies] requests = ">=2.0.1,<3.0.0" +[[package]] +name = "requirements-parser" +version = "0.11.0" +description = "This is a small Python module for parsing Pip requirement files." +optional = false +python-versions = "<4.0,>=3.8" +files = [ + {file = "requirements_parser-0.11.0-py3-none-any.whl", hash = "sha256:50379eb50311834386c2568263ae5225d7b9d0867fb55cf4ecc93959de2c2684"}, + {file = "requirements_parser-0.11.0.tar.gz", hash = "sha256:35f36dc969d14830bf459803da84f314dc3d17c802592e9e970f63d0359e5920"}, +] + +[package.dependencies] +packaging = ">=23.2" +types-setuptools = ">=69.1.0" + [[package]] name = "rfc3339-validator" version = "0.1.4" @@ -5667,6 +5714,17 @@ files = [ {file = "types_python_dateutil-2.9.0.20241206.tar.gz", hash = "sha256:18f493414c26ffba692a72369fea7a154c502646301ebfe3d56a04b3767284cb"}, ] +[[package]] +name = "types-setuptools" +version = "75.8.0.20250110" +description = "Typing stubs for setuptools" +optional = false +python-versions = ">=3.8" +files = [ + {file = "types_setuptools-75.8.0.20250110-py3-none-any.whl", hash = "sha256:a9f12980bbf9bcdc23ecd80755789085bad6bfce4060c2275bc2b4ca9f2bc480"}, + {file = "types_setuptools-75.8.0.20250110.tar.gz", hash = "sha256:96f7ec8bbd6e0a54ea180d66ad68ad7a1d7954e7281a710ea2de75e355545271"}, +] + [[package]] name = "typing-extensions" version = "4.12.2" @@ -5991,4 +6049,4 @@ postgres = ["psycopg2-binary"] [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "19ed43bf987b6bf44ed6117dd8ffbd77dd1749812f6bf4de6513d1a0969308a5" +content-hash = "1671538b16185046ad50c6f13f18a81d14cf7a2eb94311443e4346fb52e2110d" diff --git a/pyproject.toml b/pyproject.toml index 2abfc12..252295e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -72,6 +72,10 @@ lxml = ">=4.9.1" [tool.poetry.group.llm.dependencies] llm = ">=0.12" + +[tool.poetry.group.dev.dependencies] +deptry = "^0.23.0" + [build-system] requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning>=1.0.0,<2.0.0"] build-backend = "poetry_dynamic_versioning.backend" From 2df5fde91e45b1ccb23e4b0ba87980d6d1d943f9 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 3 Feb 2025 10:14:11 +1100 Subject: [PATCH 47/88] Check dependencies in CI --- .github/workflows/check-pull-request.yaml | 3 +++ 1 file changed, 3 insertions(+) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index 92df1fb..748d56b 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -86,3 +86,6 @@ jobs: run: | poetry run pip install -U pytest poetry run pytest tests/ + + - name: Check project dependencies + run: make check-dependencies From 930cbc51484498f146c7eaf15122f0dedc527609 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 3 Feb 2025 10:17:17 +1100 Subject: [PATCH 48/88] Add llm dependency. Add duckdb optional dependency --- poetry.lock | 10 +++++----- pyproject.toml | 8 ++++---- 2 files changed, 9 insertions(+), 9 deletions(-) diff --git a/poetry.lock b/poetry.lock index 1351b53..d24a3db 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2439,13 +2439,13 @@ requests = "*" [[package]] name = "llm" -version = "0.20" +version = "0.21" description = "A CLI utility and Python library for interacting with Large Language Models, including OpenAI, PaLM and local models installed on your own machine." optional = false python-versions = ">=3.9" files = [ - {file = "llm-0.20-py3-none-any.whl", hash = "sha256:530d8e88a9e662376360a8ec17bcd603d6ed5812c69766ef5a146189839d0f08"}, - {file = "llm-0.20.tar.gz", hash = "sha256:7f185db83d9e433923fe78fdd4ce4923952fb2c642273e3c099c03b0b48c1ad5"}, + {file = "llm-0.21-py3-none-any.whl", hash = "sha256:d045276c92d0eb4e5f2978123ad1a0f607085cdd454ef055731a55487ae5c0a6"}, + {file = "llm-0.21.tar.gz", hash = "sha256:ac1717e7cb68275271ad90d8f045407e59215a69b4ccc222ef4e60c43edeb95e"}, ] [package.dependencies] @@ -2464,7 +2464,7 @@ sqlite-migrate = ">=0.1a2" sqlite-utils = ">=3.37" [package.extras] -test = ["black (>=24.1.0)", "cogapp", "mypy (>=1.10.0)", "numpy", "pytest", "pytest-asyncio", "pytest-httpx (>=0.33.0)", "ruff", "types-PyYAML", "types-click", "types-setuptools"] +test = ["black (==24.10.0)", "cogapp", "mypy (>=1.10.0)", "numpy", "pytest", "pytest-asyncio", "pytest-httpx (>=0.33.0)", "ruff", "types-PyYAML", "types-click", "types-setuptools"] [[package]] name = "lxml" @@ -6049,4 +6049,4 @@ postgres = ["psycopg2-binary"] [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "1671538b16185046ad50c6f13f18a81d14cf7a2eb94311443e4346fb52e2110d" +content-hash = "27c653fc4138926dd153b314d6e318857f241e60a229aa23e5fa5cac56135640" diff --git a/pyproject.toml b/pyproject.toml index 252295e..92eb15b 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -58,6 +58,8 @@ jsonasobj2 = "^1.0.4" deprecation = "^2.1.0" numpy = "<2.0" pydbml = "^1.1.2" +pyyaml = "^6.0.2" +llm = {version = "^0.21", optional = true} [tool.poetry.dev-dependencies] pytest = ">=7.1.1" @@ -69,10 +71,6 @@ myst-parser = "*" jupyter = ">=1.0.0" lxml = ">=4.9.1" -[tool.poetry.group.llm.dependencies] -llm = ">=0.12" - - [tool.poetry.group.dev.dependencies] deptry = "^0.23.0" @@ -93,6 +91,8 @@ extract-schema = "schema_automator.utils.schema_extractor:cli" docs = ["Sphinx", "sphinx-pdj-theme", "sphinxcontrib-mermaid"] mariadb = ["mariadb"] postgres = ["psycopg2-binary"] +duckdb = ["duckdb"] +llm = ["llm"] [tool.codespell] # Ref: https://github.com/codespell-project/codespell#using-a-config-file From 392e482ee4e1024c27836c0ae4e4d6c04f9a040c Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 3 Feb 2025 10:22:47 +1100 Subject: [PATCH 49/88] Remove ruamel.yaml. Add deptry exceptions --- poetry.lock | 28 +++++++++++++++------------- pyproject.toml | 4 +++- 2 files changed, 18 insertions(+), 14 deletions(-) diff --git a/poetry.lock b/poetry.lock index d24a3db..dcf1331 100644 --- a/poetry.lock +++ b/poetry.lock @@ -606,7 +606,7 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""} name = "click-default-group" version = "1.2.4" description = "click_default_group" -optional = false +optional = true python-versions = ">=2.7" files = [ {file = "click_default_group-1.2.4-py2.py3-none-any.whl", hash = "sha256:9b60486923720e7fc61731bdb32b617039aba820e22e1c88766b1125592eaa5f"}, @@ -820,7 +820,7 @@ tomli = {version = ">=2.0.1", markers = "python_version < \"3.11\""} name = "distro" version = "1.9.0" description = "Distro - an OS platform information API" -optional = false +optional = true python-versions = ">=3.6" files = [ {file = "distro-1.9.0-py3-none-any.whl", hash = "sha256:7bffd925d65168f85027d8da9af6bddab658135b840670a223589bc0c8ef02b2"}, @@ -1783,7 +1783,7 @@ i18n = ["Babel (>=2.7)"] name = "jiter" version = "0.8.2" description = "Fast iterable JSON parser." -optional = false +optional = true python-versions = ">=3.8" files = [ {file = "jiter-0.8.2-cp310-cp310-macosx_10_12_x86_64.whl", hash = "sha256:ca8577f6a413abe29b079bc30f907894d7eb07a865c4df69475e868d73e71c7b"}, @@ -2441,7 +2441,7 @@ requests = "*" name = "llm" version = "0.21" description = "A CLI utility and Python library for interacting with Large Language Models, including OpenAI, PaLM and local models installed on your own machine." -optional = false +optional = true python-versions = ">=3.9" files = [ {file = "llm-0.21-py3-none-any.whl", hash = "sha256:d045276c92d0eb4e5f2978123ad1a0f607085cdd454ef055731a55487ae5c0a6"}, @@ -3218,7 +3218,7 @@ tests = ["coverage", "pytest", "unittest-templates"] name = "openai" version = "1.60.2" description = "The official Python library for the openai API" -optional = false +optional = true python-versions = ">=3.8" files = [ {file = "openai-1.60.2-py3-none-any.whl", hash = "sha256:993bd11b96900b9098179c728026f016b4982ded7ee30dfcf4555eab1171fff9"}, @@ -3466,7 +3466,7 @@ ptyprocess = ">=0.5" name = "pip" version = "25.0" description = "The PyPA recommended tool for installing Python packages." -optional = false +optional = true python-versions = ">=3.8" files = [ {file = "pip-25.0-py3-none-any.whl", hash = "sha256:b6eb97a803356a52b2dd4bb73ba9e65b2ba16caa6bcb25a7497350a4e5859b65"}, @@ -3764,7 +3764,7 @@ tests = ["pytest"] name = "puremagic" version = "1.28" description = "Pure python implementation of magic file detection" -optional = false +optional = true python-versions = "*" files = [ {file = "puremagic-1.28-py3-none-any.whl", hash = "sha256:e16cb9708ee2007142c37931c58f07f7eca956b3472489106a7245e5c3aa1241"}, @@ -4000,7 +4000,7 @@ diagrams = ["jinja2", "railroad-diagrams"] name = "pyreadline3" version = "3.5.4" description = "A python implementation of GNU readline." -optional = false +optional = true python-versions = ">=3.8" files = [ {file = "pyreadline3-3.5.4-py3-none-any.whl", hash = "sha256:eaf8e6cc3c49bcccf145fc6067ba8643d1df34d604a1ec0eccbf7a18e6d3fae6"}, @@ -4163,7 +4163,7 @@ dev = ["backports.zoneinfo", "black", "build", "freezegun", "mdx_truly_sane_list name = "python-ulid" version = "3.0.0" description = "Universally unique lexicographically sortable identifier" -optional = false +optional = true python-versions = ">=3.9" files = [ {file = "python_ulid-3.0.0-py3-none-any.whl", hash = "sha256:e4c4942ff50dbd79167ad01ac725ec58f924b4018025ce22c858bfcff99a5e31"}, @@ -5369,7 +5369,7 @@ url = ["furl (>=0.4.1)"] name = "sqlite-fts4" version = "1.0.3" description = "Python functions for working with SQLite FTS4 search" -optional = false +optional = true python-versions = "*" files = [ {file = "sqlite-fts4-1.0.3.tar.gz", hash = "sha256:78b05eeaf6680e9dbed8986bde011e9c086a06cb0c931b3cf7da94c214e8930c"}, @@ -5383,7 +5383,7 @@ test = ["pytest"] name = "sqlite-migrate" version = "0.1b0" description = "A simple database migration system for SQLite, based on sqlite-utils" -optional = false +optional = true python-versions = "*" files = [ {file = "sqlite-migrate-0.1b0.tar.gz", hash = "sha256:8d502b3ca4b9c45e56012bd35c03d23235f0823c976d4ce940cbb40e33087ded"}, @@ -5400,7 +5400,7 @@ test = ["black", "mypy", "pytest", "ruff"] name = "sqlite-utils" version = "3.38" description = "CLI tool and Python library for manipulating SQLite databases" -optional = false +optional = true python-versions = ">=3.8" files = [ {file = "sqlite_utils-3.38-py3-none-any.whl", hash = "sha256:8a27441015c3b2ef475f555861f7a2592f73bc60d247af9803a11b65fc605bf9"}, @@ -6043,10 +6043,12 @@ type = ["pytest-mypy"] [extras] docs = [] +duckdb = ["duckdb"] +llm = ["llm"] mariadb = ["mariadb"] postgres = ["psycopg2-binary"] [metadata] lock-version = "2.0" python-versions = "^3.9" -content-hash = "27c653fc4138926dd153b314d6e318857f241e60a229aa23e5fa5cac56135640" +content-hash = "e9cc287ec9e7de3b0da046033e7a848238fccd02e2dec118afb74dd6132c6e94" diff --git a/pyproject.toml b/pyproject.toml index 92eb15b..d1b2243 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -52,7 +52,6 @@ click = "^8.1.7" deprecated = "^1.2.15" mariadb = {version = "^1.1.11", optional = true} sqlalchemy = "^2.0.36" -ruamel-yaml = "^0.18.6" rdflib = "^7.1.1" jsonasobj2 = "^1.0.4" deprecation = "^2.1.0" @@ -100,3 +99,6 @@ skip = '.git,*.lock,resources' check-hidden = true ignore-regex = '\bOGER\b' ignore-words-list = 'sie,assertIn' + +[tool.deptry.per_rule_ignores] +DEP002 = ["numpy", "psycopg2-binary", "duckdb", "mariadb"] From f79674959d28b4c155e9c7219b31532f896a7b8d Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 3 Feb 2025 10:23:58 +1100 Subject: [PATCH 50/88] Move deptry from dev.dependencies to dev-dependencies --- pyproject.toml | 2 -- 1 file changed, 2 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index d1b2243..e53db50 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -69,8 +69,6 @@ sphinxcontrib-mermaid = ">=0.9.2" myst-parser = "*" jupyter = ">=1.0.0" lxml = ">=4.9.1" - -[tool.poetry.group.dev.dependencies] deptry = "^0.23.0" [build-system] From 9c36fa48d9b9f6d08626e95498df86944697f408 Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Mon, 3 Feb 2025 12:27:09 +1100 Subject: [PATCH 51/88] Infer schema metadata from RDFS --- .../importers/rdfs_import_engine.py | 54 +++++++++++-------- tests/test_importers/test_rdfs_importer.py | 42 +++++++++++++-- 2 files changed, 71 insertions(+), 25 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 8dcdee5..b2e17c9 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -1,8 +1,10 @@ import logging -from typing import Dict, Iterable, List, Any +from pathlib import Path +from typing import Dict, Iterable, List, Any, Mapping, TextIO import typing -from collections import defaultdict +from collections import defaultdict, Counter +from jsonasobj2 import JsonObj from linkml.utils.schema_builder import SchemaBuilder from linkml_runtime import SchemaView from linkml_runtime.linkml_model import ( @@ -10,7 +12,6 @@ SlotDefinition, ClassDefinition, Prefix, - Uriorcurie ) from dataclasses import dataclass, field @@ -24,6 +25,8 @@ HTTP_SDO = Namespace("http://schema.org/") DEFAULT_METAMODEL_MAPPINGS: Dict[str, List[URIRef]] = { + # See https://github.com/linkml/linkml/issues/2507 + "description": [RDFS.comment], "is_a": [RDFS.subClassOf, SKOS.broader], "domain_of": [HTTP_SDO.domainIncludes, SDO.domainIncludes, RDFS.domain], "range": [HTTP_SDO.rangeIncludes, SDO.rangeIncludes, RDFS.range], @@ -55,9 +58,12 @@ class RdfsImportEngine(ImportEngine): reverse_metamodel_mappings: Dict[URIRef, List[str]] = field(default_factory=lambda: defaultdict(list)) #: The names of LinkML ClassDefinition slots classdef_slots: set[str] = field(init=False) - #: The names of LinkML SlotDefinition slot slots + #: The names of LinkML SlotDefinition slots slotdef_slots: set[str] = field(init=False) + #: Every prefix seen in the graph seen_prefixes: set[str] = field(default_factory=set) + #: The counts of each prefix, used to infer the default prefix + prefix_counts: Counter[str] = field(default_factory=Counter) def __post_init__(self): sv = package_schemaview("linkml_runtime.linkml_model.meta") @@ -91,7 +97,7 @@ def __post_init__(self): def convert( self, - file: str, + file: str | Path | TextIO, name: str | None = None, format: str | None="turtle", default_prefix: str | None = None, @@ -101,23 +107,10 @@ def convert( ) -> SchemaDefinition: """ Converts an OWL schema-style ontology - - :param file: - :param name: - :param model_uri: - :param identifier: - :param kwargs: - :return: """ g = Graph(bind_namespaces="none") g.parse(file, format=format) - if name is not None and default_prefix is None: - default_prefix = name - if name is None: - name = default_prefix - if name is None: - name = "example" - sb = SchemaBuilder(name=name) + sb = SchemaBuilder() sb.add_defaults() schema = sb.schema for k, v in g.namespaces(): @@ -153,13 +146,29 @@ def convert( # Remove prefixes that aren't used if isinstance(schema.imports, list): for imp in schema.imports: - prefix, suffix = imp.split(":", 1) + prefix, _suffix = imp.split(":", 1) self.seen_prefixes.add(prefix) schema.prefixes = {key: value for key, value in schema.prefixes.items() if key in self.seen_prefixes} - + self.infer_metadata(schema, name, default_prefix, model_uri) self.fix_missing(schema) return schema + def infer_metadata(self, schema: SchemaDefinition, name: str | None, default_prefix: str | None = None, model_uri: str | None = None): + top_count = self.prefix_counts.most_common(1) + if len(top_count) == 0: + raise ValueError("No prefixes found in the graph") + inferred_prefix = top_count[0][0] + + schema.name = name or inferred_prefix + schema.default_prefix = default_prefix or inferred_prefix + prefix_uri = None + if isinstance(schema.prefixes, Mapping): + prefix_uri = schema.prefixes.get(inferred_prefix) + elif isinstance(schema.prefixes, JsonObj): + prefix_uri = schema.prefixes._get(inferred_prefix) + if isinstance(prefix_uri, Prefix): + schema.id = model_uri or prefix_uri.prefix_reference + def fix_missing(self, schema: SchemaDefinition) -> None: """ For some properties we have a `subproperty_of` that references a slot that doesn't exist. @@ -181,8 +190,9 @@ def track_uri(self, uri: str, g: Graph) -> None: """ Updates the set of prefixes seen in the graph """ - prefix, namespace, name = g.namespace_manager.compute_qname(uri) + prefix, _namespace, _name = g.namespace_manager.compute_qname(uri) self.seen_prefixes.add(prefix) + self.prefix_counts.update([prefix]) def process_rdfs_classes( self, diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index bda69b7..e539ce9 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -2,6 +2,7 @@ """Test the module can be imported.""" +from io import StringIO import unittest import os import yaml @@ -26,9 +27,45 @@ def test_import_foaf(): assert len(sv.all_classes()) == 3 assert len(sv.all_slots()) == 1 assert sv.get_slot("knows").range == "Person" - assert sv.schema.default_prefix == "example" - assert "example" in sv.schema.prefixes + assert sv.schema.default_prefix == "foaf" + assert "foaf" in sv.schema.prefixes +def test_comment_description(): + """ + rdfs:comment should be converted to description + """ + rdf = StringIO(""" + @prefix rdfs: . + + a rdfs:Class ; + rdfs:comment "A class." . + """) + engine = RdfsImportEngine() + schema = engine.convert(rdf) + sv = SchemaView(schema) + cls = sv.get_class("Class") + assert cls.description == "A class." + +def test_infer_prefix(): + """ + If the schema has no name, id or default prefix, the importer should infer them from prefix usage in the schema. + """ + rdf = StringIO(""" + @prefix rdfs: . + @prefix foo: . + + foo:Class a rdfs:Class ; + rdfs:comment "A class." . + + foo:prop a rdfs:Property ; + rdfs:comment "A property." . + """) + engine = RdfsImportEngine() + schema = engine.convert(rdf) + # Although not explicitly provided, the importer should realise that the prefix is "foo" + assert schema.default_prefix == "foo" + assert schema.id == "https://foo.com/" + assert schema.name == "foo" def test_from_rdfs(): """Test OWL conversion.""" @@ -37,7 +74,6 @@ def test_from_rdfs(): write_schema(schema, OUTSCHEMA) # roundtrip s = YAMLGenerator(OUTSCHEMA).serialize() - print(s[0:100]) sv = SchemaView(OUTSCHEMA) activity = sv.get_class("Activity") assert activity From 128d49867daf5fa8649ca27e6863c4217f56a6de Mon Sep 17 00:00:00 2001 From: Michael Milton Date: Fri, 7 Feb 2025 13:35:30 +1100 Subject: [PATCH 52/88] Update lock --- poetry.lock | 179 ++++++++++++++++++++++++++-------------------------- 1 file changed, 91 insertions(+), 88 deletions(-) diff --git a/poetry.lock b/poetry.lock index dcf1331..78aa02d 100644 --- a/poetry.lock +++ b/poetry.lock @@ -217,17 +217,17 @@ tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"] [[package]] name = "babel" -version = "2.16.0" +version = "2.17.0" description = "Internationalization utilities" optional = false python-versions = ">=3.8" files = [ - {file = "babel-2.16.0-py3-none-any.whl", hash = "sha256:368b5b98b37c06b7daf6696391c3240c938b37767d4584413e8438c5c435fa8b"}, - {file = "babel-2.16.0.tar.gz", hash = "sha256:d1f3554ca26605fe173f3de0c65f750f5a42f924499bf134de6423582298e316"}, + {file = "babel-2.17.0-py3-none-any.whl", hash = "sha256:4d0b53093fdfb4b21c92b5213dba5a1b23885afa8383709427046b21c366e5f2"}, + {file = "babel-2.17.0.tar.gz", hash = "sha256:0c54cffb19f690cdcc52a3b50bcbf71e07a808d1c80d549f2459b9d2cf0afb9d"}, ] [package.extras] -dev = 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b/docs/packages/generalizers.rst index 7c1b38a..32542b4 100644 --- a/docs/packages/generalizers.rst +++ b/docs/packages/generalizers.rst @@ -13,7 +13,7 @@ Generalizing from a single TSV .. code-block:: - schemauto generalize-csv tests/resources/NWT_wildfires_biophysical_2016.tsv -o wildfire.yaml + schemauto generalize-tsv tests/resources/NWT_wildfires_biophysical_2016.tsv -o wildfire.yaml The schema will have a slot for every column, e,g: @@ -227,7 +227,7 @@ If you provide an ``--annotator`` option you can auto-annotate enums: .. code-block:: - schemauto generalize-csv \ + schemauto generalize-tsv \ --annotator bioportal:envo \ tests/resources/NWT_wildfires_biophysical_2016.tsv \ -o wildfire.yaml @@ -289,4 +289,4 @@ Packages for generalizing :members: .. autoclass:: RdfDataGeneralizer - :members: \ No newline at end of file + :members: From c4fac5c48574e5051e50e3ebd3ff87720506de8a Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Thu, 8 May 2025 13:32:13 -0500 Subject: [PATCH 54/88] Fix date range without times --- schema_automator/generalizers/csv_data_generalizer.py | 2 ++ tests/test_generalizers/test_csv_data_generalizer.py | 4 ++++ 2 files changed, 6 insertions(+) diff --git a/schema_automator/generalizers/csv_data_generalizer.py b/schema_automator/generalizers/csv_data_generalizer.py index cdb7b79..7eb639d 100644 --- a/schema_automator/generalizers/csv_data_generalizer.py +++ b/schema_automator/generalizers/csv_data_generalizer.py @@ -645,6 +645,8 @@ def infer_range(slot: dict, vals: set, types: dict, coerce=True) -> str: if all(isfloat(v) for v in nn_vals): return 'float' if all(is_date(v) for v in nn_vals): + if all(len(str(v).split('T')) == 1 for v in nn_vals): # Check if values are just dates without time + return 'date' return 'datetime' if is_all_measurement(nn_vals): return 'measurement' diff --git a/tests/test_generalizers/test_csv_data_generalizer.py b/tests/test_generalizers/test_csv_data_generalizer.py index d7f83b6..b85d789 100644 --- a/tests/test_generalizers/test_csv_data_generalizer.py +++ b/tests/test_generalizers/test_csv_data_generalizer.py @@ -68,6 +68,10 @@ def test_infer_range(self): (['5.999', '7.955', '7.990', '6.990'], "float"), (["2mm", "3m", "4 mm"], "measurement"), (["true", "false"], "boolean"), + (["2024-01-01", "2023-12-31"], "date"), + (["2024-01-01T12:30:00", "2023-12-31T08:15:00"], "datetime"), + (["2024-01-01", "2023-12-31T08:15:00"], "datetime"), + (["2024-01-01", "not-a-date"], "string"), ] for values, expected in cases: self.assertEqual(infer_range({}, values, {}), expected, f"Failed on {values}") From d9b90c3caeb76b29650f75c21452a0999dacc257 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Thu, 8 May 2025 13:37:51 -0500 Subject: [PATCH 55/88] Add .python-version to .gitignore --- .gitignore | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.gitignore b/.gitignore index ec442c0..5bddbe2 100644 --- a/.gitignore +++ b/.gitignore @@ -14,4 +14,5 @@ tests/outputs/* venv/ .venv/ target/ -local/ \ No newline at end of file +local/ +.python-version From 073f33871872b6ee7a0722cfb1c885721b09afa1 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Thu, 8 May 2025 16:21:02 -0500 Subject: [PATCH 56/88] Switch to actions/cache@v3 in workflow --- .github/workflows/check-pull-request.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index 748d56b..91f9377 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -57,7 +57,7 @@ jobs: #---------------------------------------------- - name: Load cached venv id: cached-poetry-dependencies - uses: actions/cache@v2 + uses: actions/cache@v3 with: path: .venv key: venv-${{ runner.os }}-${{ hashFiles('**/poetry.lock') }} From 47bf5deb679cf62d59fc9521dcbb75384e35c632 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Fri, 9 May 2025 12:30:53 -0500 Subject: [PATCH 57/88] Fix 3.9 type issue --- pyproject.toml | 2 +- schema_automator/importers/rdfs_import_engine.py | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index e53db50..a481bf9 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -60,7 +60,7 @@ pydbml = "^1.1.2" pyyaml = "^6.0.2" llm = {version = "^0.21", optional = true} -[tool.poetry.dev-dependencies] +[tool.poetry.group.dev.dependencies] pytest = ">=7.1.1" Sphinx = ">=4.4.0" sphinx-pdj-theme = ">=0.2.1" diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index b2e17c9..16728ec 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -1,6 +1,6 @@ import logging from pathlib import Path -from typing import Dict, Iterable, List, Any, Mapping, TextIO +from typing import Dict, Iterable, List, Mapping, TextIO, Union import typing from collections import defaultdict, Counter @@ -51,7 +51,7 @@ class RdfsImportEngine(ImportEngine): #: Mapping from field names in this RDF schema (e.g. `price`) to IRIs (e.g. `http://schema.org/price`) mappings: Dict[str, URIRef] = field(default_factory=dict) #: User-defined mapping from LinkML metamodel slots (such as `domain_of`) to RDFS IRIs (such as http://schema.org/domainIncludes) - initial_metamodel_mappings: Dict[str, URIRef | List[URIRef]] = field(default_factory=dict) + initial_metamodel_mappings: Dict[str, Union[URIRef, List[URIRef]]] = field(default_factory=dict) #: Combined mapping from LinkML metamodel slots to RDFS IRIs metamodel_mappings: Dict[str, List[URIRef]] = field(default_factory=lambda: defaultdict(list)) #: Reverse of `metamodel_mappings`, but supports multiple terms mapping to the same IRI From 4ddbc4bb6d73f2b84dd496784266e28fdf81cfec Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Fri, 9 May 2025 12:41:40 -0500 Subject: [PATCH 58/88] Update poetry lock --- poetry.lock | 579 +++++++++++++++++++++++++++++++++++++++++++++++++++- 1 file changed, 570 insertions(+), 9 deletions(-) diff --git a/poetry.lock b/poetry.lock index 78aa02d..970059d 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.8.5 and should not be changed by hand. +# This file is automatically @generated by Poetry 2.0.1 and should not be changed by hand. [[package]] name = "airium" @@ -6,6 +6,8 @@ version = "0.2.6" description = "Easy and quick html builder with natural syntax correspondence (python->html). No templates needed. Serves pure pythonic library with no dependencies." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "airium-0.2.6-py3-none-any.whl", hash = "sha256:50af5cf491e084f27909e29a93550b4170e587cde01334d58c6249644ee8c6c2"}, {file = "airium-0.2.6.tar.gz", hash = "sha256:ccab36b798b6cce3d0c5074e52ce8059f6e82991caae4985f42cadfad80b1de4"}, @@ -21,6 +23,8 @@ version = "0.7.16" description = "A light, configurable Sphinx theme" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "alabaster-0.7.16-py3-none-any.whl", hash = "sha256:b46733c07dce03ae4e150330b975c75737fa60f0a7c591b6c8bf4928a28e2c92"}, {file = "alabaster-0.7.16.tar.gz", hash = "sha256:75a8b99c28a5dad50dd7f8ccdd447a121ddb3892da9e53d1ca5cca3106d58d65"}, @@ -32,6 +36,8 @@ version = "0.7.0" description = "Reusable constraint types to use with typing.Annotated" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "annotated_types-0.7.0-py3-none-any.whl", hash = "sha256:1f02e8b43a8fbbc3f3e0d4f0f4bfc8131bcb4eebe8849b8e5c773f3a1c582a53"}, {file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"}, @@ -43,6 +49,8 @@ version = "4.9.3" description = "ANTLR 4.9.3 runtime for Python 3.7" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "antlr4-python3-runtime-4.9.3.tar.gz", hash = "sha256:f224469b4168294902bb1efa80a8bf7855f24c99aef99cbefc1bcd3cce77881b"}, ] @@ -53,10 +61,12 @@ version = "4.8.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" optional = false python-versions = ">=3.9" +groups = ["main", "dev"] files = [ {file = "anyio-4.8.0-py3-none-any.whl", hash = "sha256:b5011f270ab5eb0abf13385f851315585cc37ef330dd88e27ec3d34d651fd47a"}, {file = "anyio-4.8.0.tar.gz", hash = "sha256:1d9fe889df5212298c0c0723fa20479d1b94883a2df44bd3897aa91083316f7a"}, ] +markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} [package.dependencies] exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""} @@ -75,6 +85,8 @@ version = "1.4.4" description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"}, {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"}, @@ -86,6 +98,8 @@ version = "0.1.4" description = "Disable App Nap on macOS >= 10.9" optional = false python-versions = ">=3.6" +groups = ["dev"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and platform_system == \"Darwin\"" files = [ {file = "appnope-0.1.4-py2.py3-none-any.whl", hash = "sha256:502575ee11cd7a28c0205f379b525beefebab9d161b7c964670864014ed7213c"}, {file = "appnope-0.1.4.tar.gz", hash = "sha256:1de3860566df9caf38f01f86f65e0e13e379af54f9e4bee1e66b48f2efffd1ee"}, @@ -97,6 +111,8 @@ version = "23.1.0" description = "Argon2 for Python" optional = false python-versions = ">=3.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "argon2_cffi-23.1.0-py3-none-any.whl", hash = "sha256:c670642b78ba29641818ab2e68bd4e6a78ba53b7eff7b4c3815ae16abf91c7ea"}, {file = "argon2_cffi-23.1.0.tar.gz", hash = "sha256:879c3e79a2729ce768ebb7d36d4609e3a78a4ca2ec3a9f12286ca057e3d0db08"}, @@ -117,6 +133,8 @@ version = "21.2.0" description = "Low-level CFFI bindings for Argon2" optional = false python-versions = ">=3.6" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "argon2-cffi-bindings-21.2.0.tar.gz", hash = "sha256:bb89ceffa6c791807d1305ceb77dbfacc5aa499891d2c55661c6459651fc39e3"}, {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-macosx_10_9_x86_64.whl", hash = "sha256:ccb949252cb2ab3a08c02024acb77cfb179492d5701c7cbdbfd776124d4d2367"}, @@ -154,6 +172,8 @@ version = "1.3.0" description = "Better dates & times for Python" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "arrow-1.3.0-py3-none-any.whl", hash = "sha256:c728b120ebc00eb84e01882a6f5e7927a53960aa990ce7dd2b10f39005a67f80"}, {file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"}, @@ -173,6 +193,8 @@ version = "3.0.0" description = "Annotate AST trees with source code positions" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "asttokens-3.0.0-py3-none-any.whl", hash = "sha256:e3078351a059199dd5138cb1c706e6430c05eff2ff136af5eb4790f9d28932e2"}, {file = "asttokens-3.0.0.tar.gz", hash = "sha256:0dcd8baa8d62b0c1d118b399b2ddba3c4aff271d0d7a9e0d4c1681c79035bbc7"}, @@ -188,6 +210,8 @@ version = "2.0.4" description = "Simple LRU cache for asyncio" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "async-lru-2.0.4.tar.gz", hash = "sha256:b8a59a5df60805ff63220b2a0c5b5393da5521b113cd5465a44eb037d81a5627"}, {file = "async_lru-2.0.4-py3-none-any.whl", hash = "sha256:ff02944ce3c288c5be660c42dbcca0742b32c3b279d6dceda655190240b99224"}, @@ -202,6 +226,8 @@ version = "25.1.0" description = "Classes Without Boilerplate" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "attrs-25.1.0-py3-none-any.whl", hash = "sha256:c75a69e28a550a7e93789579c22aa26b0f5b83b75dc4e08fe092980051e1090a"}, {file = "attrs-25.1.0.tar.gz", hash = "sha256:1c97078a80c814273a76b2a298a932eb681c87415c11dee0a6921de7f1b02c3e"}, @@ -221,6 +247,8 @@ version = "2.17.0" description = "Internationalization utilities" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "babel-2.17.0-py3-none-any.whl", hash = "sha256:4d0b53093fdfb4b21c92b5213dba5a1b23885afa8383709427046b21c366e5f2"}, {file = "babel-2.17.0.tar.gz", hash = "sha256:0c54cffb19f690cdcc52a3b50bcbf71e07a808d1c80d549f2459b9d2cf0afb9d"}, @@ -235,6 +263,8 @@ version = "0.1.0" description = "Language tags made easy" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "bcp47-0.1.0-py3-none-any.whl", hash = "sha256:a567b7fe881c900916a9db62ac8f792370c7ddf2664e601b74eeed35d8758aa5"}, {file = "bcp47-0.1.0.tar.gz", hash = "sha256:37cc7a03fd696149ebfe7de785c5bad473f911eddac8415cf479584049cf03d5"}, @@ -246,6 +276,8 @@ version = "4.13.3" description = "Screen-scraping library" optional = false python-versions = ">=3.7.0" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "beautifulsoup4-4.13.3-py3-none-any.whl", hash = "sha256:99045d7d3f08f91f0d656bc9b7efbae189426cd913d830294a15eefa0ea4df16"}, {file = "beautifulsoup4-4.13.3.tar.gz", hash = "sha256:1bd32405dacc920b42b83ba01644747ed77456a65760e285fbc47633ceddaf8b"}, @@ -268,6 +300,8 @@ version = "0.11.35" description = "Integrated registry of biological databases and nomenclatures" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "bioregistry-0.11.35-py3-none-any.whl", hash = "sha256:64713a6595190175d506f2053b1599707a8cf266a2ba44cff3c2e29b71063f90"}, {file = "bioregistry-0.11.35.tar.gz", hash = "sha256:f3c57638c193161674f3569312dd6c3a3f99ace862a5c8e0c7986c06e30815d0"}, @@ -299,6 +333,8 @@ version = "6.2.0" description = "An easy safelist-based HTML-sanitizing tool." optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "bleach-6.2.0-py3-none-any.whl", hash = "sha256:117d9c6097a7c3d22fd578fcd8d35ff1e125df6736f554da4e432fdd63f31e5e"}, {file = "bleach-6.2.0.tar.gz", hash = "sha256:123e894118b8a599fd80d3ec1a6d4cc7ce4e5882b1317a7e1ba69b56e95f991f"}, @@ -317,6 +353,8 @@ version = "5.5.1" description = "Extensible memoizing collections and decorators" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "cachetools-5.5.1-py3-none-any.whl", hash = "sha256:b76651fdc3b24ead3c648bbdeeb940c1b04d365b38b4af66788f9ec4a81d42bb"}, {file = "cachetools-5.5.1.tar.gz", hash = "sha256:70f238fbba50383ef62e55c6aff6d9673175fe59f7c6782c7a0b9e38f4a9df95"}, @@ -328,6 +366,8 @@ version = "24.1.2" description = "Composable complex class support for attrs and dataclasses." optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "cattrs-24.1.2-py3-none-any.whl", hash = "sha256:67c7495b760168d931a10233f979b28dc04daf853b30752246f4f8471c6d68d0"}, {file = "cattrs-24.1.2.tar.gz", hash = "sha256:8028cfe1ff5382df59dd36474a86e02d817b06eaf8af84555441bac915d2ef85"}, @@ -354,6 +394,8 @@ version = "2025.1.31" description = "Python package for providing Mozilla's CA Bundle." optional = false python-versions = ">=3.6" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "certifi-2025.1.31-py3-none-any.whl", hash = "sha256:ca78db4565a652026a4db2bcdf68f2fb589ea80d0be70e03929ed730746b84fe"}, {file = "certifi-2025.1.31.tar.gz", hash = "sha256:3d5da6925056f6f18f119200434a4780a94263f10d1c21d032a6f6b2baa20651"}, @@ -365,6 +407,8 @@ version = "1.17.1" description = "Foreign Function Interface for Python calling C code." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "cffi-1.17.1-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:df8b1c11f177bc2313ec4b2d46baec87a5f3e71fc8b45dab2ee7cae86d9aba14"}, {file = "cffi-1.17.1-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:8f2cdc858323644ab277e9bb925ad72ae0e67f69e804f4898c070998d50b1a67"}, @@ -444,6 +488,8 @@ version = "0.2.1" description = "rdflib collections flattening graph" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "CFGraph-0.2.1.tar.gz", hash = "sha256:b57fe7044a10b8ff65aa3a8a8ddc7d4cd77bf511b42e57289cd52cbc29f8fe74"}, ] @@ -457,6 +503,8 @@ version = "5.2.0" description = "Universal encoding detector for Python 3" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "chardet-5.2.0-py3-none-any.whl", hash = "sha256:e1cf59446890a00105fe7b7912492ea04b6e6f06d4b742b2c788469e34c82970"}, {file = "chardet-5.2.0.tar.gz", hash = "sha256:1b3b6ff479a8c414bc3fa2c0852995695c4a026dcd6d0633b2dd092ca39c1cf7"}, @@ -468,6 +516,8 @@ version = "3.4.1" description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet." optional = false python-versions = ">=3.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "charset_normalizer-3.4.1-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:91b36a978b5ae0ee86c394f5a54d6ef44db1de0815eb43de826d41d21e4af3de"}, {file = "charset_normalizer-3.4.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:7461baadb4dc00fd9e0acbe254e3d7d2112e7f92ced2adc96e54ef6501c5f176"}, @@ -569,6 +619,8 @@ version = "0.5.4" description = "Lookup and instantiate classes with style." optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "class_resolver-0.5.4-py3-none-any.whl", hash = "sha256:d0893e145a925a6b11d1c5f5b0ddbba35eb30788e68a800fb6cf91d348f47592"}, {file = "class_resolver-0.5.4.tar.gz", hash = "sha256:e09dc2ea33712f1c2dd151671cb6dc8e68777be80c1136c9748eacb84f83d638"}, @@ -595,6 +647,8 @@ version = "8.1.8" description = "Composable command line interface toolkit" optional = false python-versions = ">=3.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "click-8.1.8-py3-none-any.whl", hash = "sha256:63c132bbbed01578a06712a2d1f497bb62d9c1c0d329b7903a866228027263b2"}, {file = "click-8.1.8.tar.gz", hash = "sha256:ed53c9d8990d83c2a27deae68e4ee337473f6330c040a31d4225c9574d16096a"}, @@ -609,6 +663,8 @@ version = "1.2.4" description = "click_default_group" optional = true python-versions = ">=2.7" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "click_default_group-1.2.4-py2.py3-none-any.whl", hash = "sha256:9b60486923720e7fc61731bdb32b617039aba820e22e1c88766b1125592eaa5f"}, {file = "click_default_group-1.2.4.tar.gz", hash = "sha256:eb3f3c99ec0d456ca6cd2a7f08f7d4e91771bef51b01bdd9580cc6450fe1251e"}, @@ -626,6 +682,8 @@ version = "0.4.0" description = "Logging integration for Click" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "click-log-0.4.0.tar.gz", hash = "sha256:3970f8570ac54491237bcdb3d8ab5e3eef6c057df29f8c3d1151a51a9c23b975"}, {file = "click_log-0.4.0-py2.py3-none-any.whl", hash = "sha256:a43e394b528d52112af599f2fc9e4b7cf3c15f94e53581f74fa6867e68c91756"}, @@ -640,6 +698,8 @@ version = "0.4.6" description = "Cross-platform colored terminal text." optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7" +groups = ["main", "dev"] +markers = "(platform_system == \"Windows\" or sys_platform == \"win32\") and (python_version <= \"3.11\" or python_version >= \"3.12\")" files = [ {file = "colorama-0.4.6-py2.py3-none-any.whl", hash = "sha256:4f1d9991f5acc0ca119f9d443620b77f9d6b33703e51011c16baf57afb285fc6"}, {file = "colorama-0.4.6.tar.gz", hash = "sha256:08695f5cb7ed6e0531a20572697297273c47b8cae5a63ffc6d6ed5c201be6e44"}, @@ -651,6 +711,8 @@ version = "0.2.2" description = "Jupyter Python Comm implementation, for usage in ipykernel, xeus-python etc." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "comm-0.2.2-py3-none-any.whl", hash = "sha256:e6fb86cb70ff661ee8c9c14e7d36d6de3b4066f1441be4063df9c5009f0a64d3"}, {file = "comm-0.2.2.tar.gz", hash = "sha256:3fd7a84065306e07bea1773df6eb8282de51ba82f77c72f9c85716ab11fe980e"}, @@ -668,6 +730,8 @@ version = "0.10.4" description = "Idiomatic conversion between URIs and compact URIs (CURIEs)" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "curies-0.10.4-py3-none-any.whl", hash = "sha256:bbb8059b7e0bababa8ee40108201b1e89649b6312a4f3b013dd33f21a792b0bc"}, {file = "curies-0.10.4.tar.gz", hash = "sha256:07d65db6b9b916729f22fb06d23b5cb98f3ba7768e643d04c654a449467c3bc5"}, @@ -693,6 +757,8 @@ version = "1.3.46" description = "Diff and patch tables" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "daff-1.3.46.tar.gz", hash = "sha256:22d0da9fd6a3275b54c926a9c97b180f9258aad65113ea18f3fec52cbadcd818"}, ] @@ -703,6 +769,8 @@ version = "1.8.12" description = "An implementation of the Debug Adapter Protocol for Python" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "debugpy-1.8.12-cp310-cp310-macosx_14_0_x86_64.whl", hash = "sha256:a2ba7ffe58efeae5b8fad1165357edfe01464f9aef25e814e891ec690e7dd82a"}, {file = "debugpy-1.8.12-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:cbbd4149c4fc5e7d508ece083e78c17442ee13b0e69bfa6bd63003e486770f45"}, @@ -738,6 +806,8 @@ version = "5.1.1" description = "Decorators for Humans" optional = false python-versions = ">=3.5" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "decorator-5.1.1-py3-none-any.whl", hash = "sha256:b8c3f85900b9dc423225913c5aace94729fe1fa9763b38939a95226f02d37186"}, {file = "decorator-5.1.1.tar.gz", hash = "sha256:637996211036b6385ef91435e4fae22989472f9d571faba8927ba8253acbc330"}, @@ -749,6 +819,8 @@ version = "0.7.1" description = "XML bomb protection for Python stdlib modules" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "defusedxml-0.7.1-py2.py3-none-any.whl", hash = "sha256:a352e7e428770286cc899e2542b6cdaedb2b4953ff269a210103ec58f6198a61"}, {file = "defusedxml-0.7.1.tar.gz", hash = "sha256:1bb3032db185915b62d7c6209c5a8792be6a32ab2fedacc84e01b52c51aa3e69"}, @@ -760,6 +832,8 @@ version = "1.2.18" description = "Python @deprecated decorator to deprecate old python classes, functions or methods." optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "Deprecated-1.2.18-py2.py3-none-any.whl", hash = "sha256:bd5011788200372a32418f888e326a09ff80d0214bd961147cfed01b5c018eec"}, {file = "deprecated-1.2.18.tar.gz", hash = "sha256:422b6f6d859da6f2ef57857761bfb392480502a64c3028ca9bbe86085d72115d"}, @@ -777,6 +851,8 @@ version = "2.1.0" description = "A library to handle automated deprecations" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "deprecation-2.1.0-py2.py3-none-any.whl", hash = "sha256:a10811591210e1fb0e768a8c25517cabeabcba6f0bf96564f8ff45189f90b14a"}, {file = "deprecation-2.1.0.tar.gz", hash = "sha256:72b3bde64e5d778694b0cf68178aed03d15e15477116add3fb773e581f9518ff"}, @@ -791,6 +867,8 @@ version = "0.23.0" description = "A command line utility to check for unused, missing and transitive dependencies in a Python project." optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "deptry-0.23.0-cp39-abi3-macosx_10_12_x86_64.whl", hash = "sha256:1f2a6817a37d76e8f6b667381b7caf6ea3e6d6c18b5be24d36c625f387c79852"}, {file = "deptry-0.23.0-cp39-abi3-macosx_11_0_arm64.whl", hash = "sha256:9601b64cc0aed42687fdd5c912d5f1e90d7f7333fb589b14e35bfdfebae866f3"}, @@ -823,6 +901,8 @@ version = "1.9.0" description = "Distro - an OS platform information API" optional = true python-versions = ">=3.6" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "distro-1.9.0-py3-none-any.whl", hash = "sha256:7bffd925d65168f85027d8da9af6bddab658135b840670a223589bc0c8ef02b2"}, {file = "distro-1.9.0.tar.gz", hash = "sha256:2fa77c6fd8940f116ee1d6b94a2f90b13b5ea8d019b98bc8bafdcabcdd9bdbed"}, @@ -834,6 +914,8 @@ version = "0.6.2" description = "Pythonic argument parser, that will make you smile" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "docopt-0.6.2.tar.gz", hash = "sha256:49b3a825280bd66b3aa83585ef59c4a8c82f2c8a522dbe754a8bc8d08c85c491"}, ] @@ -844,6 +926,8 @@ version = "0.21.2" description = "Docutils -- Python Documentation Utilities" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "docutils-0.21.2-py3-none-any.whl", hash = "sha256:dafca5b9e384f0e419294eb4d2ff9fa826435bf15f15b7bd45723e8ad76811b2"}, {file = "docutils-0.21.2.tar.gz", hash = "sha256:3a6b18732edf182daa3cd12775bbb338cf5691468f91eeeb109deff6ebfa986f"}, @@ -855,6 +939,8 @@ version = "0.10.3" description = "DuckDB in-process database" optional = true python-versions = ">=3.7.0" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"duckdb\"" files = [ {file = "duckdb-0.10.3-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:cd25cc8d001c09a19340739ba59d33e12a81ab285b7a6bed37169655e1cefb31"}, {file = "duckdb-0.10.3-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:2f9259c637b917ca0f4c63887e8d9b35ec248f5d987c886dfc4229d66a791009"}, @@ -911,6 +997,8 @@ version = "2.0.0" description = "An implementation of lxml.xmlfile for the standard library" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "et_xmlfile-2.0.0-py3-none-any.whl", hash = "sha256:7a91720bc756843502c3b7504c77b8fe44217c85c537d85037f0f536151b2caa"}, {file = "et_xmlfile-2.0.0.tar.gz", hash = "sha256:dab3f4764309081ce75662649be815c4c9081e88f0837825f90fd28317d4da54"}, @@ -922,6 +1010,8 @@ version = "0.6.0" description = "\"Python interface to NCBI's eutilities API\"" optional = false python-versions = ">=3.6" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "eutils-0.6.0-py2.py3-none-any.whl", hash = "sha256:4938c4baff6ca52141204ff3eff3a91ec1e83e52a6c5d92e7163585117b96566"}, {file = "eutils-0.6.0.tar.gz", hash = "sha256:3515178c0aadb836206a3eee2bc9f340f3213c13b53632e058eb58a9219d03cf"}, @@ -941,6 +1031,8 @@ version = "0.2.2" description = "Like `typing._eval_type`, but lets older Python versions use newer typing features." optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version < \"3.10\"" files = [ {file = "eval_type_backport-0.2.2-py3-none-any.whl", hash = "sha256:cb6ad7c393517f476f96d456d0412ea80f0a8cf96f6892834cd9340149111b0a"}, {file = "eval_type_backport-0.2.2.tar.gz", hash = "sha256:f0576b4cf01ebb5bd358d02314d31846af5e07678387486e2c798af0e7d849c1"}, @@ -955,6 +1047,8 @@ version = "1.2.2" description = "Backport of PEP 654 (exception groups)" optional = false python-versions = ">=3.7" +groups = ["main", "dev"] +markers = "python_version < \"3.11\"" files = [ {file = "exceptiongroup-1.2.2-py3-none-any.whl", hash = "sha256:3111b9d131c238bec2f8f516e123e14ba243563fb135d3fe885990585aa7795b"}, {file = "exceptiongroup-1.2.2.tar.gz", hash = "sha256:47c2edf7c6738fafb49fd34290706d1a1a2f4d1c6df275526b62cbb4aa5393cc"}, @@ -969,6 +1063,8 @@ version = "2.2.0" description = "Get the currently executing AST node of a frame, and other information" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "executing-2.2.0-py2.py3-none-any.whl", hash = "sha256:11387150cad388d62750327a53d3339fad4888b39a6fe233c3afbb54ecffd3aa"}, {file = "executing-2.2.0.tar.gz", hash = "sha256:5d108c028108fe2551d1a7b2e8b713341e2cb4fc0aa7dcf966fa4327a5226755"}, @@ -983,6 +1079,8 @@ version = "2.21.1" description = "Fastest Python implementation of JSON schema" optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "fastjsonschema-2.21.1-py3-none-any.whl", hash = "sha256:c9e5b7e908310918cf494a434eeb31384dd84a98b57a30bcb1f535015b554667"}, {file = "fastjsonschema-2.21.1.tar.gz", hash = "sha256:794d4f0a58f848961ba16af7b9c85a3e88cd360df008c59aac6fc5ae9323b5d4"}, @@ -997,6 +1095,8 @@ version = "0.12.3" description = "Faultless AST for Open Biomedical Ontologies in Python." optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "fastobo-0.12.3-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:79fe4f5ba1ec1a2bc1ca0d65834cfc622db639128ba89019328937e623c54094"}, {file = "fastobo-0.12.3-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:21c347ec270d0ef6e120ba701370a8ef20953654b397d2814f62595d4d7c0062"}, @@ -1052,6 +1152,8 @@ version = "1.5.1" description = "Validates fully-qualified domain names against RFC 1123, so that they are acceptable to modern bowsers" optional = false python-versions = ">=2.7, !=3.0, !=3.1, !=3.2, !=3.3, !=3.4, <4" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "fqdn-1.5.1-py3-none-any.whl", hash = "sha256:3a179af3761e4df6eb2e026ff9e1a3033d3587bf980a0b1b2e1e5d08d7358014"}, {file = "fqdn-1.5.1.tar.gz", hash = "sha256:105ed3677e767fb5ca086a0c1f4bb66ebc3c100be518f0e0d755d9eae164d89f"}, @@ -1063,6 +1165,8 @@ version = "0.2.3" description = "Python rendering of the OWL Functional syntax" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "funowl-0.2.3-py3-none-any.whl", hash = "sha256:4c4328d03c7815cd61d6691f0fafc78dc9a78ec3dcab4c83afb64d125ad3660e"}, {file = "funowl-0.2.3.tar.gz", hash = "sha256:eecc2f58d792c714f6671a826cb2744e80cd3019fa56b3c8539ce69c8d874126"}, @@ -1082,6 +1186,8 @@ version = "3.0.0" description = "Python bindings to the Google search engine." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google-3.0.0-py2.py3-none-any.whl", hash = "sha256:889cf695f84e4ae2c55fbc0cfdaf4c1e729417fa52ab1db0485202ba173e4935"}, {file = "google-3.0.0.tar.gz", hash = "sha256:143530122ee5130509ad5e989f0512f7cb218b2d4eddbafbad40fd10e8d8ccbe"}, @@ -1096,6 +1202,8 @@ version = "2.24.1" description = "Google API client core library" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google_api_core-2.24.1-py3-none-any.whl", hash = "sha256:bc78d608f5a5bf853b80bd70a795f703294de656c096c0968320830a4bc280f1"}, {file = "google_api_core-2.24.1.tar.gz", hash = "sha256:f8b36f5456ab0dd99a1b693a40a31d1e7757beea380ad1b38faaf8941eae9d8a"}, @@ -1123,6 +1231,8 @@ version = "2.160.0" description = "Google API Client Library for Python" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google_api_python_client-2.160.0-py2.py3-none-any.whl", hash = "sha256:63d61fb3e4cf3fb31a70a87f45567c22f6dfe87bbfa27252317e3e2c42900db4"}, {file = "google_api_python_client-2.160.0.tar.gz", hash = "sha256:a8ccafaecfa42d15d5b5c3134ced8de08380019717fc9fb1ed510ca58eca3b7e"}, @@ -1141,6 +1251,8 @@ version = "2.38.0" description = "Google Authentication Library" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google_auth-2.38.0-py2.py3-none-any.whl", hash = "sha256:e7dae6694313f434a2727bf2906f27ad259bae090d7aa896590d86feec3d9d4a"}, {file = "google_auth-2.38.0.tar.gz", hash = "sha256:8285113607d3b80a3f1543b75962447ba8a09fe85783432a784fdeef6ac094c4"}, @@ -1165,6 +1277,8 @@ version = "0.2.0" description = "Google Authentication Library: httplib2 transport" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google-auth-httplib2-0.2.0.tar.gz", hash = "sha256:38aa7badf48f974f1eb9861794e9c0cb2a0511a4ec0679b1f886d108f5640e05"}, {file = "google_auth_httplib2-0.2.0-py2.py3-none-any.whl", hash = "sha256:b65a0a2123300dd71281a7bf6e64d65a0759287df52729bdd1ae2e47dc311a3d"}, @@ -1180,6 +1294,8 @@ version = "1.2.1" description = "Google Authentication Library" optional = false python-versions = ">=3.6" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google_auth_oauthlib-1.2.1-py2.py3-none-any.whl", hash = "sha256:2d58a27262d55aa1b87678c3ba7142a080098cbc2024f903c62355deb235d91f"}, {file = "google_auth_oauthlib-1.2.1.tar.gz", hash = "sha256:afd0cad092a2eaa53cd8e8298557d6de1034c6cb4a740500b5357b648af97263"}, @@ -1198,6 +1314,8 @@ version = "1.66.0" description = "Common protobufs used in Google APIs" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "googleapis_common_protos-1.66.0-py2.py3-none-any.whl", hash = "sha256:d7abcd75fabb2e0ec9f74466401f6c119a0b498e27370e9be4c94cb7e382b8ed"}, {file = "googleapis_common_protos-1.66.0.tar.gz", hash = "sha256:c3e7b33d15fdca5374cc0a7346dd92ffa847425cc4ea941d970f13680052ec8c"}, @@ -1215,6 +1333,8 @@ version = "0.20.3" description = "Simple Python interface for Graphviz" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "graphviz-0.20.3-py3-none-any.whl", hash = "sha256:81f848f2904515d8cd359cc611faba817598d2feaac4027b266aa3eda7b3dde5"}, {file = "graphviz-0.20.3.zip", hash = "sha256:09d6bc81e6a9fa392e7ba52135a9d49f1ed62526f96499325930e87ca1b5925d"}, @@ -1231,6 +1351,8 @@ version = "3.1.1" description = "Lightweight in-process concurrent programming" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version < \"3.14\" and (platform_machine == \"aarch64\" or platform_machine == \"ppc64le\" or platform_machine == \"x86_64\" or platform_machine == \"amd64\" or platform_machine == \"AMD64\" or platform_machine == \"win32\" or platform_machine == \"WIN32\") and (python_version <= \"3.11\" or python_version >= \"3.12\")" files = [ {file = "greenlet-3.1.1-cp310-cp310-macosx_11_0_universal2.whl", hash = "sha256:0bbae94a29c9e5c7e4a2b7f0aae5c17e8e90acbfd3bf6270eeba60c39fce3563"}, {file = "greenlet-3.1.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:0fde093fb93f35ca72a556cf72c92ea3ebfda3d79fc35bb19fbe685853869a83"}, @@ -1317,6 +1439,8 @@ version = "6.1.4" description = "Google Spreadsheets Python API" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "gspread-6.1.4-py3-none-any.whl", hash = "sha256:c34781c426031a243ad154952b16f21ac56a5af90687885fbee3d1fba5280dcd"}, {file = "gspread-6.1.4.tar.gz", hash = "sha256:b8eec27de7cadb338bb1b9f14a9be168372dee8965c0da32121816b5050ac1de"}, @@ -1332,6 +1456,8 @@ version = "1.2.0" description = "Complete Google Sheets formatting support for gspread worksheets" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "gspread-formatting-1.2.0.tar.gz", hash = "sha256:ba88eab6940e8f37580fc3073e89848ab7a6eaab4ed91f43b731579280c14086"}, {file = "gspread_formatting-1.2.0-py2.py3-none-any.whl", hash = "sha256:9400a2369021ae6f6b31ed12eeddea35e5cfe1fd6c795487ed228eaf10fafad5"}, @@ -1346,10 +1472,12 @@ version = "0.14.0" description = "A pure-Python, bring-your-own-I/O implementation of HTTP/1.1" optional = false python-versions = ">=3.7" +groups = ["main", "dev"] files = [ {file = "h11-0.14.0-py3-none-any.whl", hash = "sha256:e3fe4ac4b851c468cc8363d500db52c2ead036020723024a109d37346efaa761"}, {file = "h11-0.14.0.tar.gz", hash = "sha256:8f19fbbe99e72420ff35c00b27a34cb9937e902a8b810e2c88300c6f0a3b699d"}, ] +markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} [[package]] name = "hbreader" @@ -1357,6 +1485,8 @@ version = "0.9.1" description = "Honey Badger reader - a generic file/url/string open and read tool" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "hbreader-0.9.1-py3-none-any.whl", hash = "sha256:9a6e76c9d1afc1b977374a5dc430a1ebb0ea0488205546d4678d6e31cc5f6801"}, {file = "hbreader-0.9.1.tar.gz", hash = "sha256:d2c132f8ba6276d794c66224c3297cec25c8079d0a4cf019c061611e0a3b94fa"}, @@ -1368,10 +1498,12 @@ version = "1.0.7" description = "A minimal low-level HTTP client." optional = false python-versions = ">=3.8" +groups = ["main", "dev"] files = [ {file = "httpcore-1.0.7-py3-none-any.whl", hash = "sha256:a3fff8f43dc260d5bd363d9f9cf1830fa3a458b332856f34282de498ed420edd"}, {file = "httpcore-1.0.7.tar.gz", hash = "sha256:8551cb62a169ec7162ac7be8d4817d561f60e08eaa485234898414bb5a8a0b4c"}, ] +markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} [package.dependencies] certifi = "*" @@ -1389,6 +1521,8 @@ version = "0.22.0" description = "A comprehensive HTTP client library." optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "httplib2-0.22.0-py3-none-any.whl", hash = "sha256:14ae0a53c1ba8f3d37e9e27cf37eabb0fb9980f435ba405d546948b009dd64dc"}, {file = "httplib2-0.22.0.tar.gz", hash = "sha256:d7a10bc5ef5ab08322488bde8c726eeee5c8618723fdb399597ec58f3d82df81"}, @@ -1403,10 +1537,12 @@ version = "0.28.1" description = "The next generation HTTP client." optional = false python-versions = ">=3.8" +groups = ["main", "dev"] files = [ {file = "httpx-0.28.1-py3-none-any.whl", hash = "sha256:d909fcccc110f8c7faf814ca82a9a4d816bc5a6dbfea25d6591d6985b8ba59ad"}, {file = "httpx-0.28.1.tar.gz", hash = "sha256:75e98c5f16b0f35b567856f597f06ff2270a374470a5c2392242528e3e3e42fc"}, ] +markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} [package.dependencies] anyio = "*" @@ -1427,6 +1563,8 @@ version = "3.10" description = "Internationalized Domain Names in Applications (IDNA)" optional = false python-versions = ">=3.6" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "idna-3.10-py3-none-any.whl", hash = "sha256:946d195a0d259cbba61165e88e65941f16e9b36ea6ddb97f00452bae8b1287d3"}, {file = "idna-3.10.tar.gz", hash = "sha256:12f65c9b470abda6dc35cf8e63cc574b1c52b11df2c86030af0ac09b01b13ea9"}, @@ -1441,6 +1579,8 @@ version = "3.3.0" description = "Iterative JSON parser with standard Python iterator interfaces" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ijson-3.3.0-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:7f7a5250599c366369fbf3bc4e176f5daa28eb6bc7d6130d02462ed335361675"}, {file = "ijson-3.3.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:f87a7e52f79059f9c58f6886c262061065eb6f7554a587be7ed3aa63e6b71b34"}, @@ -1544,6 +1684,8 @@ version = "1.4.1" description = "Getting image size from png/jpeg/jpeg2000/gif file" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "imagesize-1.4.1-py2.py3-none-any.whl", hash = "sha256:0d8d18d08f840c19d0ee7ca1fd82490fdc3729b7ac93f49870406ddde8ef8d8b"}, {file = "imagesize-1.4.1.tar.gz", hash = "sha256:69150444affb9cb0d5cc5a92b3676f0b2fb7cd9ae39e947a5e11a36b4497cd4a"}, @@ -1555,6 +1697,8 @@ version = "8.6.1" description = "Read metadata from Python packages" optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version < \"3.10\"" files = [ {file = "importlib_metadata-8.6.1-py3-none-any.whl", hash = "sha256:02a89390c1e15fdfdc0d7c6b25cb3e62650d0494005c97d6f148bf5b9787525e"}, {file = "importlib_metadata-8.6.1.tar.gz", hash = "sha256:310b41d755445d74569f993ccfc22838295d9fe005425094fad953d7f15c8580"}, @@ -1578,6 +1722,8 @@ version = "6.5.2" description = "Read resources from Python packages" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "importlib_resources-6.5.2-py3-none-any.whl", hash = "sha256:789cfdc3ed28c78b67a06acb8126751ced69a3d5f79c095a98298cd8a760ccec"}, {file = "importlib_resources-6.5.2.tar.gz", hash = "sha256:185f87adef5bcc288449d98fb4fba07cea78bc036455dd44c5fc4a2fe78fed2c"}, @@ -1600,6 +1746,8 @@ version = "7.5.0" description = "Correctly generate plurals, singular nouns, ordinals, indefinite articles" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "inflect-7.5.0-py3-none-any.whl", hash = "sha256:2aea70e5e70c35d8350b8097396ec155ffd68def678c7ff97f51aa69c1d92344"}, {file = "inflect-7.5.0.tar.gz", hash = "sha256:faf19801c3742ed5a05a8ce388e0d8fe1a07f8d095c82201eb904f5d27ad571f"}, @@ -1623,6 +1771,8 @@ version = "2.0.0" description = "brain-dead simple config-ini parsing" optional = false python-versions = ">=3.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "iniconfig-2.0.0-py3-none-any.whl", hash = "sha256:b6a85871a79d2e3b22d2d1b94ac2824226a63c6b741c88f7ae975f18b6778374"}, {file = "iniconfig-2.0.0.tar.gz", hash = "sha256:2d91e135bf72d31a410b17c16da610a82cb55f6b0477d1a902134b24a455b8b3"}, @@ -1634,6 +1784,8 @@ version = "6.29.5" description = "IPython Kernel for Jupyter" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ipykernel-6.29.5-py3-none-any.whl", hash = "sha256:afdb66ba5aa354b09b91379bac28ae4afebbb30e8b39510c9690afb7a10421b5"}, {file = "ipykernel-6.29.5.tar.gz", hash = "sha256:f093a22c4a40f8828f8e330a9c297cb93dcab13bd9678ded6de8e5cf81c56215"}, @@ -1667,6 +1819,8 @@ version = "8.18.1" description = "IPython: Productive Interactive Computing" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ipython-8.18.1-py3-none-any.whl", hash = "sha256:e8267419d72d81955ec1177f8a29aaa90ac80ad647499201119e2f05e99aa397"}, {file = "ipython-8.18.1.tar.gz", hash = "sha256:ca6f079bb33457c66e233e4580ebfc4128855b4cf6370dddd73842a9563e8a27"}, @@ -1704,6 +1858,8 @@ version = "8.1.5" description = "Jupyter interactive widgets" optional = false python-versions = ">=3.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ipywidgets-8.1.5-py3-none-any.whl", hash = "sha256:3290f526f87ae6e77655555baba4f36681c555b8bdbbff430b70e52c34c86245"}, {file = "ipywidgets-8.1.5.tar.gz", hash = "sha256:870e43b1a35656a80c18c9503bbf2d16802db1cb487eec6fab27d683381dde17"}, @@ -1725,6 +1881,8 @@ version = "0.7.2" description = "An ISO 8601 date/time/duration parser and formatter" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "isodate-0.7.2-py3-none-any.whl", hash = "sha256:28009937d8031054830160fce6d409ed342816b543597cece116d966c6d99e15"}, {file = "isodate-0.7.2.tar.gz", hash = "sha256:4cd1aa0f43ca76f4a6c6c0292a85f40b35ec2e43e315b59f06e6d32171a953e6"}, @@ -1736,6 +1894,8 @@ version = "20.11.0" description = "Operations with ISO 8601 durations" optional = false python-versions = ">=3.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "isoduration-20.11.0-py3-none-any.whl", hash = "sha256:b2904c2a4228c3d44f409c8ae8e2370eb21a26f7ac2ec5446df141dde3452042"}, {file = "isoduration-20.11.0.tar.gz", hash = "sha256:ac2f9015137935279eac671f94f89eb00584f940f5dc49462a0c4ee692ba1bd9"}, @@ -1750,6 +1910,8 @@ version = "0.19.2" description = "An autocompletion tool for Python that can be used for text editors." optional = false python-versions = ">=3.6" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jedi-0.19.2-py2.py3-none-any.whl", hash = "sha256:a8ef22bde8490f57fe5c7681a3c83cb58874daf72b4784de3cce5b6ef6edb5b9"}, {file = "jedi-0.19.2.tar.gz", hash = "sha256:4770dc3de41bde3966b02eb84fbcf557fb33cce26ad23da12c742fb50ecb11f0"}, @@ -1769,6 +1931,8 @@ version = "3.1.5" description = "A very fast and expressive template engine." optional = false python-versions = ">=3.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jinja2-3.1.5-py3-none-any.whl", hash = "sha256:aba0f4dc9ed8013c424088f68a5c226f7d6097ed89b246d7749c2ec4175c6adb"}, {file = "jinja2-3.1.5.tar.gz", hash = "sha256:8fefff8dc3034e27bb80d67c671eb8a9bc424c0ef4c0826edbff304cceff43bb"}, @@ -1786,6 +1950,8 @@ version = "0.8.2" description = "Fast iterable JSON parser." optional = true python-versions = ">=3.8" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "jiter-0.8.2-cp310-cp310-macosx_10_12_x86_64.whl", hash = "sha256:ca8577f6a413abe29b079bc30f907894d7eb07a865c4df69475e868d73e71c7b"}, {file = "jiter-0.8.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:b25bd626bde7fb51534190c7e3cb97cee89ee76b76d7585580e22f34f5e3f393"}, @@ -1871,6 +2037,8 @@ version = "0.1.9" description = "Python library for denormalizing nested dicts or json objects to tables and back" optional = false python-versions = ">=3.7.0" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "json_flattener-0.1.9-py3-none-any.whl", hash = "sha256:6b027746f08bf37a75270f30c6690c7149d5f704d8af1740c346a3a1236bc941"}, {file = "json_flattener-0.1.9.tar.gz", hash = "sha256:84cf8523045ffb124301a602602201665fcb003a171ece87e6f46ed02f7f0c15"}, @@ -1886,6 +2054,8 @@ version = "0.10.0" description = "A Python implementation of the JSON5 data format." optional = false python-versions = ">=3.8.0" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "json5-0.10.0-py3-none-any.whl", hash = "sha256:19b23410220a7271e8377f81ba8aacba2fdd56947fbb137ee5977cbe1f5e8dfa"}, {file = "json5-0.10.0.tar.gz", hash = "sha256:e66941c8f0a02026943c52c2eb34ebeb2a6f819a0be05920a6f5243cd30fd559"}, @@ -1900,6 +2070,8 @@ version = "1.3.1" description = "JSON as python objects" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonasobj-1.3.1-py3-none-any.whl", hash = "sha256:b9e329dc1ceaae7cf5d5b214684a0b100e0dad0be6d5bbabac281ec35ddeca65"}, {file = "jsonasobj-1.3.1.tar.gz", hash = "sha256:d52e0544a54a08f6ea3f77fa3387271e3648655e0eace2f21e825c26370e44a2"}, @@ -1911,6 +2083,8 @@ version = "1.0.4" description = "JSON as python objects - version 2" optional = false python-versions = ">=3.6" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonasobj2-1.0.4-py3-none-any.whl", hash = "sha256:12e86f86324d54fcf60632db94ea74488d5314e3da554c994fe1e2c6f29acb79"}, {file = "jsonasobj2-1.0.4.tar.gz", hash = "sha256:f50b1668ef478004aa487b2d2d094c304e5cb6b79337809f4a1f2975cc7fbb4e"}, @@ -1925,6 +2099,8 @@ version = "4.0.0" description = "Library with helpers for the jsonlines file format" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonlines-4.0.0-py3-none-any.whl", hash = "sha256:185b334ff2ca5a91362993f42e83588a360cf95ce4b71a73548502bda52a7c55"}, {file = "jsonlines-4.0.0.tar.gz", hash = "sha256:0c6d2c09117550c089995247f605ae4cf77dd1533041d366351f6f298822ea74"}, @@ -1939,6 +2115,8 @@ version = "1.33" description = "Apply JSON-Patches (RFC 6902)" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonpatch-1.33-py2.py3-none-any.whl", hash = "sha256:0ae28c0cd062bbd8b8ecc26d7d164fbbea9652a1a3693f3b956c1eae5145dade"}, {file = "jsonpatch-1.33.tar.gz", hash = "sha256:9fcd4009c41e6d12348b4a0ff2563ba56a2923a7dfee731d004e212e1ee5030c"}, @@ -1953,6 +2131,8 @@ version = "1.7.0" description = "A final implementation of JSONPath for Python that aims to be standard compliant, including arithmetic and binary comparison operators and providing clear AST for metaprogramming." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonpath-ng-1.7.0.tar.gz", hash = "sha256:f6f5f7fd4e5ff79c785f1573b394043b39849fb2bb47bcead935d12b00beab3c"}, {file = "jsonpath_ng-1.7.0-py2-none-any.whl", hash = "sha256:898c93fc173f0c336784a3fa63d7434297544b7198124a68f9a3ef9597b0ae6e"}, @@ -1968,6 +2148,8 @@ version = "3.0.0" description = "Identify specific nodes in a JSON document (RFC 6901)" optional = false python-versions = ">=3.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonpointer-3.0.0-py2.py3-none-any.whl", hash = "sha256:13e088adc14fca8b6aa8177c044e12701e6ad4b28ff10e65f2267a90109c9942"}, {file = "jsonpointer-3.0.0.tar.gz", hash = "sha256:2b2d729f2091522d61c3b31f82e11870f60b68f43fbc705cb76bf4b832af59ef"}, @@ -1979,6 +2161,8 @@ version = "4.23.0" description = "An implementation of JSON Schema validation for Python" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonschema-4.23.0-py3-none-any.whl", hash = "sha256:fbadb6f8b144a8f8cf9f0b89ba94501d143e50411a1278633f56a7acf7fd5566"}, {file = "jsonschema-4.23.0.tar.gz", hash = "sha256:d71497fef26351a33265337fa77ffeb82423f3ea21283cd9467bb03999266bc4"}, @@ -1986,17 +2170,35 @@ files = [ [package.dependencies] attrs = ">=22.2.0" -fqdn = {version = "*", optional = true, markers = "extra == \"format-nongpl\""} -idna = {version = "*", optional = true, markers = "extra == \"format-nongpl\""} -isoduration = {version = "*", optional = true, markers = "extra == \"format-nongpl\""} -jsonpointer = {version = ">1.13", optional = true, markers = "extra == \"format-nongpl\""} +fqdn = [ + {version = "*", optional = true, markers = "extra == \"format\""}, + {version = "*", optional = true, markers = "extra == \"format-nongpl\""}, +] +idna = [ + {version = "*", optional = true, markers = "extra == \"format\""}, + {version = "*", optional = true, markers = "extra == \"format-nongpl\""}, +] +isoduration = [ + {version = "*", optional = true, markers = "extra == \"format\""}, + {version = "*", optional = true, markers = "extra == \"format-nongpl\""}, +] +jsonpointer = [ + {version = ">1.13", optional = true, markers = "extra == \"format\""}, + {version = ">1.13", optional = true, markers = "extra == \"format-nongpl\""}, +] jsonschema-specifications = ">=2023.03.6" referencing = ">=0.28.4" -rfc3339-validator = {version = "*", optional = true, markers = "extra == \"format-nongpl\""} +rfc3339-validator = [ + {version = "*", optional = true, markers = "extra == \"format\""}, + {version = "*", optional = true, markers = "extra == \"format-nongpl\""}, +] rfc3986-validator = {version = ">0.1.0", optional = true, markers = "extra == \"format-nongpl\""} rfc3987 = {version = "*", optional = true, markers = "extra == \"format\""} rpds-py = ">=0.7.1" -uri-template = {version = "*", optional = true, markers = "extra == \"format-nongpl\""} +uri-template = [ + {version = "*", optional = true, markers = "extra == \"format\""}, + {version = "*", optional = true, markers = "extra == \"format-nongpl\""}, +] webcolors = [ {version = ">=1.11", optional = true, markers = "extra == \"format\""}, {version = ">=24.6.0", optional = true, markers = "extra == \"format-nongpl\""}, @@ -2012,6 +2214,8 @@ version = "2024.10.1" description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry" optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonschema_specifications-2024.10.1-py3-none-any.whl", hash = "sha256:a09a0680616357d9a0ecf05c12ad234479f549239d0f5b55f3deea67475da9bf"}, {file = "jsonschema_specifications-2024.10.1.tar.gz", hash = "sha256:0f38b83639958ce1152d02a7f062902c41c8fd20d558b0c34344292d417ae272"}, @@ -2026,6 +2230,8 @@ version = "1.1.1" description = "Jupyter metapackage. Install all the Jupyter components in one go." optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter-1.1.1-py2.py3-none-any.whl", hash = "sha256:7a59533c22af65439b24bbe60373a4e95af8f16ac65a6c00820ad378e3f7cc83"}, {file = "jupyter-1.1.1.tar.gz", hash = "sha256:d55467bceabdea49d7e3624af7e33d59c37fff53ed3a350e1ac957bed731de7a"}, @@ -2045,6 +2251,8 @@ version = "8.6.3" description = "Jupyter protocol implementation and client libraries" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_client-8.6.3-py3-none-any.whl", hash = "sha256:e8a19cc986cc45905ac3362915f410f3af85424b4c0905e94fa5f2cb08e8f23f"}, {file = "jupyter_client-8.6.3.tar.gz", hash = "sha256:35b3a0947c4a6e9d589eb97d7d4cd5e90f910ee73101611f01283732bd6d9419"}, @@ -2068,6 +2276,8 @@ version = "6.6.3" description = "Jupyter terminal console" optional = false python-versions = ">=3.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_console-6.6.3-py3-none-any.whl", hash = "sha256:309d33409fcc92ffdad25f0bcdf9a4a9daa61b6f341177570fdac03de5352485"}, {file = "jupyter_console-6.6.3.tar.gz", hash = "sha256:566a4bf31c87adbfadf22cdf846e3069b59a71ed5da71d6ba4d8aaad14a53539"}, @@ -2092,6 +2302,8 @@ version = "5.7.2" description = "Jupyter core package. A base package on which Jupyter projects rely." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_core-5.7.2-py3-none-any.whl", hash = "sha256:4f7315d2f6b4bcf2e3e7cb6e46772eba760ae459cd1f59d29eb57b0a01bd7409"}, {file = "jupyter_core-5.7.2.tar.gz", hash = "sha256:aa5f8d32bbf6b431ac830496da7392035d6f61b4f54872f15c4bd2a9c3f536d9"}, @@ -2112,6 +2324,8 @@ version = "0.12.0" description = "Jupyter Event System library" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_events-0.12.0-py3-none-any.whl", hash = "sha256:6464b2fa5ad10451c3d35fabc75eab39556ae1e2853ad0c0cc31b656731a97fb"}, {file = "jupyter_events-0.12.0.tar.gz", hash = "sha256:fc3fce98865f6784c9cd0a56a20644fc6098f21c8c33834a8d9fe383c17e554b"}, @@ -2138,6 +2352,8 @@ version = "2.2.5" description = "Multi-Language Server WebSocket proxy for Jupyter Notebook/Lab server" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter-lsp-2.2.5.tar.gz", hash = "sha256:793147a05ad446f809fd53ef1cd19a9f5256fd0a2d6b7ce943a982cb4f545001"}, {file = "jupyter_lsp-2.2.5-py3-none-any.whl", hash = "sha256:45fbddbd505f3fbfb0b6cb2f1bc5e15e83ab7c79cd6e89416b248cb3c00c11da"}, @@ -2153,6 +2369,8 @@ version = "2.15.0" description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications." optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_server-2.15.0-py3-none-any.whl", hash = "sha256:872d989becf83517012ee669f09604aa4a28097c0bd90b2f424310156c2cdae3"}, {file = "jupyter_server-2.15.0.tar.gz", hash = "sha256:9d446b8697b4f7337a1b7cdcac40778babdd93ba614b6d68ab1c0c918f1c4084"}, @@ -2189,6 +2407,8 @@ version = "0.5.3" description = "A Jupyter Server Extension Providing Terminals." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_server_terminals-0.5.3-py3-none-any.whl", hash = "sha256:41ee0d7dc0ebf2809c668e0fc726dfaf258fcd3e769568996ca731b6194ae9aa"}, {file = "jupyter_server_terminals-0.5.3.tar.gz", hash = "sha256:5ae0295167220e9ace0edcfdb212afd2b01ee8d179fe6f23c899590e9b8a5269"}, @@ -2208,6 +2428,8 @@ version = "4.3.5" description = "JupyterLab computational environment" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab-4.3.5-py3-none-any.whl", hash = "sha256:571bbdee20e4c5321ab5195bc41cf92a75a5cff886be5e57ce78dfa37a5e9fdb"}, {file = "jupyterlab-4.3.5.tar.gz", hash = "sha256:c779bf72ced007d7d29d5bcef128e7fdda96ea69299e19b04a43635a7d641f9d"}, @@ -2243,6 +2465,8 @@ version = "0.3.0" description = "Pygments theme using JupyterLab CSS variables" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab_pygments-0.3.0-py3-none-any.whl", hash = "sha256:841a89020971da1d8693f1a99997aefc5dc424bb1b251fd6322462a1b8842780"}, {file = "jupyterlab_pygments-0.3.0.tar.gz", hash = "sha256:721aca4d9029252b11cfa9d185e5b5af4d54772bb8072f9b7036f4170054d35d"}, @@ -2254,6 +2478,8 @@ version = "2.27.3" description = "A set of server components for JupyterLab and JupyterLab like applications." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab_server-2.27.3-py3-none-any.whl", hash = "sha256:e697488f66c3db49df675158a77b3b017520d772c6e1548c7d9bcc5df7944ee4"}, {file = "jupyterlab_server-2.27.3.tar.gz", hash = "sha256:eb36caca59e74471988f0ae25c77945610b887f777255aa21f8065def9e51ed4"}, @@ -2280,6 +2506,8 @@ version = "3.0.13" description = "Jupyter interactive widgets for JupyterLab" optional = false python-versions = ">=3.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab_widgets-3.0.13-py3-none-any.whl", hash = "sha256:e3cda2c233ce144192f1e29914ad522b2f4c40e77214b0cc97377ca3d323db54"}, {file = "jupyterlab_widgets-3.0.13.tar.gz", hash = "sha256:a2966d385328c1942b683a8cd96b89b8dd82c8b8f81dda902bb2bc06d46f5bed"}, @@ -2291,6 +2519,8 @@ version = "0.5.0" description = "Schema for the KGCL project." optional = false python-versions = ">=3.8,<4.0" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "kgcl_rdflib-0.5.0-py3-none-any.whl", hash = "sha256:214c011eac692384dd18397e455af2a7375f6a2f71fa318df245e8826678f454"}, {file = "kgcl_rdflib-0.5.0.tar.gz", hash = "sha256:19e34690316714b9c500e1749a35d1a0d17282f2a38cd2b1fd3d7d8cf5e6013d"}, @@ -2306,6 +2536,8 @@ version = "0.6.9" description = "Schema for the KGCL project." optional = false python-versions = "<4.0,>=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "kgcl_schema-0.6.9-py3-none-any.whl", hash = "sha256:6acd367a4cd998ec8dfe70987bf797aecce558df86a1395bc8c3e0489f66b9a9"}, {file = "kgcl_schema-0.6.9.tar.gz", hash = "sha256:1bb0f9f13356df7b5c6ba9c73a7124dc897e525af49f40454dafd45bfca021bd"}, @@ -2323,6 +2555,8 @@ version = "1.2.2" description = "a modern parsing library" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "lark-1.2.2-py3-none-any.whl", hash = "sha256:c2276486b02f0f1b90be155f2c8ba4a8e194d42775786db622faccd652d8e80c"}, {file = "lark-1.2.2.tar.gz", hash = "sha256:ca807d0162cd16cef15a8feecb862d7319e7a09bdb13aef927968e45040fed80"}, @@ -2340,6 +2574,8 @@ version = "1.8.6" description = "Linked Open Data Modeling Language" optional = false python-versions = "<4.0.0,>=3.8.1" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "linkml-1.8.6-py3-none-any.whl", hash = "sha256:17e222cbbf8873508fbcc6c39d1ce06b6b14a372adc73bbaffe3d328d1af59ea"}, {file = "linkml-1.8.6.tar.gz", hash = "sha256:81da9eb75a1cdbe050eaa421fbe4c1e035be9f5f05c154ec667a2ec711839bc5"}, @@ -2384,6 +2620,8 @@ version = "0.1.0" description = "LinkML Data Operations API" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "linkml_dataops-0.1.0-py3-none-any.whl", hash = "sha256:193cf7f659e5f07946d2c2761896910d5f7151d91282543b1363801f68307f4c"}, {file = "linkml_dataops-0.1.0.tar.gz", hash = "sha256:4550eab65e78b70dc3b9c651724a94ac2b1d1edb2fbe576465f1d6951a54ed04"}, @@ -2402,6 +2640,8 @@ version = "0.3.1" description = "linkml-renderer" optional = false python-versions = "<4.0,>=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "linkml_renderer-0.3.1-py3-none-any.whl", hash = "sha256:3737247ecc349c270b849c55593719fb457b385223ef8f75e7e7b0da11eb12e3"}, {file = "linkml_renderer-0.3.1.tar.gz", hash = "sha256:f600ca96d603e53b7187abe1dc9c417334bd96756d3e4f704a96892f6b28ba5a"}, @@ -2419,6 +2659,8 @@ version = "1.8.3" description = "Runtime environment for LinkML, the Linked open data modeling language" optional = false python-versions = "<4.0,>=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "linkml_runtime-1.8.3-py3-none-any.whl", hash = "sha256:0750920f1348fffa903d99e7b5834ce425a2a538285aff9068dbd96d05caabd1"}, {file = "linkml_runtime-1.8.3.tar.gz", hash = "sha256:5b7f682eef54aaf0a59c50eeacdb11463b43b124a044caf496cde59936ac05c8"}, @@ -2445,6 +2687,8 @@ version = "0.21" description = "A CLI utility and Python library for interacting with Large Language Models, including OpenAI, PaLM and local models installed on your own machine." optional = true python-versions = ">=3.9" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "llm-0.21-py3-none-any.whl", hash = "sha256:d045276c92d0eb4e5f2978123ad1a0f607085cdd454ef055731a55487ae5c0a6"}, {file = "llm-0.21.tar.gz", hash = "sha256:ac1717e7cb68275271ad90d8f045407e59215a69b4ccc222ef4e60c43edeb95e"}, @@ -2474,6 +2718,8 @@ version = "5.3.0" description = "Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API." optional = false python-versions = ">=3.6" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "lxml-5.3.0-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:dd36439be765e2dde7660212b5275641edbc813e7b24668831a5c8ac91180656"}, {file = "lxml-5.3.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:ae5fe5c4b525aa82b8076c1a59d642c17b6e8739ecf852522c6321852178119d"}, @@ -2628,6 +2874,8 @@ version = "1.1.11" description = "Python MariaDB extension" optional = true python-versions = ">=3.8" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"mariadb\"" files = [ {file = "mariadb-1.1.11-cp310-cp310-win32.whl", hash = "sha256:dbc4cf0e302ca82d46f9431a0b04f048e9c21ee56d6f3162c29605f84d63b40c"}, {file = "mariadb-1.1.11-cp310-cp310-win_amd64.whl", hash = "sha256:579420293fa790d5ae0a6cb4bdb7e8be8facc2ceefb6123c2b0e8042b3fa725d"}, @@ -2651,6 +2899,8 @@ version = "3.0.0" description = "Python port of markdown-it. Markdown parsing, done right!" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "markdown-it-py-3.0.0.tar.gz", hash = "sha256:e3f60a94fa066dc52ec76661e37c851cb232d92f9886b15cb560aaada2df8feb"}, {file = "markdown_it_py-3.0.0-py3-none-any.whl", hash = "sha256:355216845c60bd96232cd8d8c40e8f9765cc86f46880e43a8fd22dc1a1a8cab1"}, @@ -2675,6 +2925,8 @@ version = "3.0.2" description = "Safely add untrusted strings to HTML/XML markup." optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "MarkupSafe-3.0.2-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:7e94c425039cde14257288fd61dcfb01963e658efbc0ff54f5306b06054700f8"}, {file = "MarkupSafe-3.0.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:9e2d922824181480953426608b81967de705c3cef4d1af983af849d7bd619158"}, @@ -2745,6 +2997,8 @@ version = "0.1.7" description = "Inline Matplotlib backend for Jupyter" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "matplotlib_inline-0.1.7-py3-none-any.whl", hash = "sha256:df192d39a4ff8f21b1895d72e6a13f5fcc5099f00fa84384e0ea28c2cc0653ca"}, {file = "matplotlib_inline-0.1.7.tar.gz", hash = "sha256:8423b23ec666be3d16e16b60bdd8ac4e86e840ebd1dd11a30b9f117f2fa0ab90"}, @@ -2759,6 +3013,8 @@ version = "0.4.2" description = "Collection of plugins for markdown-it-py" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mdit_py_plugins-0.4.2-py3-none-any.whl", hash = "sha256:0c673c3f889399a33b95e88d2f0d111b4447bdfea7f237dab2d488f459835636"}, {file = "mdit_py_plugins-0.4.2.tar.gz", hash = "sha256:5f2cd1fdb606ddf152d37ec30e46101a60512bc0e5fa1a7002c36647b09e26b5"}, @@ -2778,6 +3034,8 @@ version = "0.1.2" description = "Markdown URL utilities" optional = false python-versions = ">=3.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mdurl-0.1.2-py3-none-any.whl", hash = "sha256:84008a41e51615a49fc9966191ff91509e3c40b939176e643fd50a5c2196b8f8"}, {file = "mdurl-0.1.2.tar.gz", hash = "sha256:bb413d29f5eea38f31dd4754dd7377d4465116fb207585f97bf925588687c1ba"}, @@ -2789,6 +3047,8 @@ version = "3.1.1" description = "A sane and fast Markdown parser with useful plugins and renderers" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mistune-3.1.1-py3-none-any.whl", hash = "sha256:02106ac2aa4f66e769debbfa028509a275069dcffce0dfa578edd7b991ee700a"}, {file = "mistune-3.1.1.tar.gz", hash = "sha256:e0740d635f515119f7d1feb6f9b192ee60f0cc649f80a8f944f905706a21654c"}, @@ -2803,6 +3063,8 @@ version = "0.1.2" description = "More click." optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "more_click-0.1.2-py3-none-any.whl", hash = "sha256:f6387af37ef7e7423bd94b72a81a53c79c5086a3bfe5cc035da534ff0c2a0a9e"}, {file = "more_click-0.1.2.tar.gz", hash = "sha256:085da66d5a9b823c5d912a888dca1fa0c8b3a14ed1b21ea9c8a1b814857a3981"}, @@ -2820,6 +3082,8 @@ version = "10.6.0" description = "More routines for operating on iterables, beyond itertools" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "more-itertools-10.6.0.tar.gz", hash = "sha256:2cd7fad1009c31cc9fb6a035108509e6547547a7a738374f10bd49a09eb3ee3b"}, {file = "more_itertools-10.6.0-py3-none-any.whl", hash = "sha256:6eb054cb4b6db1473f6e15fcc676a08e4732548acd47c708f0e179c2c7c01e89"}, @@ -2831,6 +3095,8 @@ version = "1.0.0" description = "Type system extensions for programs checked with the mypy type checker." optional = false python-versions = ">=3.5" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mypy_extensions-1.0.0-py3-none-any.whl", hash = "sha256:4392f6c0eb8a5668a69e23d168ffa70f0be9ccfd32b5cc2d26a34ae5b844552d"}, {file = "mypy_extensions-1.0.0.tar.gz", hash = "sha256:75dbf8955dc00442a438fc4d0666508a9a97b6bd41aa2f0ffe9d2f2725af0782"}, @@ -2842,6 +3108,8 @@ version = "3.0.1" description = "An extended [CommonMark](https://spec.commonmark.org/) compliant parser," optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "myst_parser-3.0.1-py3-none-any.whl", hash = "sha256:6457aaa33a5d474aca678b8ead9b3dc298e89c68e67012e73146ea6fd54babf1"}, {file = "myst_parser-3.0.1.tar.gz", hash = "sha256:88f0cb406cb363b077d176b51c476f62d60604d68a8dcdf4832e080441301a87"}, @@ -2868,6 +3136,8 @@ version = "0.10.2" description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor." optional = false python-versions = ">=3.9.0" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbclient-0.10.2-py3-none-any.whl", hash = "sha256:4ffee11e788b4a27fabeb7955547e4318a5298f34342a4bfd01f2e1faaeadc3d"}, {file = "nbclient-0.10.2.tar.gz", hash = "sha256:90b7fc6b810630db87a6d0c2250b1f0ab4cf4d3c27a299b0cde78a4ed3fd9193"}, @@ -2890,6 +3160,8 @@ version = "7.16.6" description = "Converting Jupyter Notebooks (.ipynb files) to other formats. Output formats include asciidoc, html, latex, markdown, pdf, py, rst, script. nbconvert can be used both as a Python library (`import nbconvert`) or as a command line tool (invoked as `jupyter nbconvert ...`)." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbconvert-7.16.6-py3-none-any.whl", hash = "sha256:1375a7b67e0c2883678c48e506dc320febb57685e5ee67faa51b18a90f3a712b"}, {file = "nbconvert-7.16.6.tar.gz", hash = "sha256:576a7e37c6480da7b8465eefa66c17844243816ce1ccc372633c6b71c3c0f582"}, @@ -2927,6 +3199,8 @@ version = "5.10.4" description = "The Jupyter Notebook format" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbformat-5.10.4-py3-none-any.whl", hash = "sha256:3b48d6c8fbca4b299bf3982ea7db1af21580e4fec269ad087b9e81588891200b"}, {file = "nbformat-5.10.4.tar.gz", hash = "sha256:322168b14f937a5d11362988ecac2a4952d3d8e3a2cbeb2319584631226d5b3a"}, @@ -2948,6 +3222,8 @@ version = "3.10.0" description = "Nice CX Python includes a client and a data model." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ndex2-3.10.0-py2.py3-none-any.whl", hash = "sha256:fdb8307ccdbdf49044c9119373852242ca24a4926df1c5566e94965e59b70b67"}, {file = "ndex2-3.10.0.tar.gz", hash = "sha256:7e8cfc3fc940cddfd612810fc8c913ab61e01a43e4f482608e86c6548b81b7e1"}, @@ -2969,6 +3245,8 @@ version = "1.6.0" description = "Patch asyncio to allow nested event loops" optional = false python-versions = ">=3.5" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nest_asyncio-1.6.0-py3-none-any.whl", hash = "sha256:87af6efd6b5e897c81050477ef65c62e2b2f35d51703cae01aff2905b1852e1c"}, {file = "nest_asyncio-1.6.0.tar.gz", hash = "sha256:6f172d5449aca15afd6c646851f4e31e02c598d553a667e38cafa997cfec55fe"}, @@ -2980,6 +3258,8 @@ version = "3.2.1" description = "Python package for creating and manipulating graphs and networks" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "networkx-3.2.1-py3-none-any.whl", hash = "sha256:f18c69adc97877c42332c170849c96cefa91881c99a7cb3e95b7c659ebdc1ec2"}, {file = "networkx-3.2.1.tar.gz", hash = "sha256:9f1bb5cf3409bf324e0a722c20bdb4c20ee39bf1c30ce8ae499c8502b0b5e0c6"}, @@ -2998,6 +3278,8 @@ version = "7.3.2" description = "Jupyter Notebook - A web-based notebook environment for interactive computing" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "notebook-7.3.2-py3-none-any.whl", hash = "sha256:e5f85fc59b69d3618d73cf27544418193ff8e8058d5bf61d315ce4f473556288"}, {file = "notebook-7.3.2.tar.gz", hash = "sha256:705e83a1785f45b383bf3ee13cb76680b92d24f56fb0c7d2136fe1d850cd3ca8"}, @@ -3021,6 +3303,8 @@ version = "0.2.4" description = "A shim layer for notebook traits and config" optional = false python-versions = ">=3.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "notebook_shim-0.2.4-py3-none-any.whl", hash = "sha256:411a5be4e9dc882a074ccbcae671eda64cceb068767e9a3419096986560e1cef"}, {file = "notebook_shim-0.2.4.tar.gz", hash = "sha256:b4b2cfa1b65d98307ca24361f5b30fe785b53c3fd07b7a47e89acb5e6ac638cb"}, @@ -3038,6 +3322,8 @@ version = "0.5.14" description = "Modules to convert numbers to words. Easily extensible." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "num2words-0.5.14-py3-none-any.whl", hash = "sha256:1c8e5b00142fc2966fd8d685001e36c4a9911e070d1b120e1beb721fa1edb33d"}, {file = "num2words-0.5.14.tar.gz", hash = "sha256:b066ec18e56b6616a3b38086b5747daafbaa8868b226a36127e0451c0cf379c6"}, @@ -3052,6 +3338,8 @@ version = "1.26.4" description = "Fundamental package for array computing in Python" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "numpy-1.26.4-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:9ff0f4f29c51e2803569d7a51c2304de5554655a60c5d776e35b4a41413830d0"}, {file = "numpy-1.26.4-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:2e4ee3380d6de9c9ec04745830fd9e2eccb3e6cf790d39d7b98ffd19b0dd754a"}, @@ -3097,6 +3385,8 @@ version = "0.6.19" description = "Ontology Access Kit: Python library for common ontology operations over a variety of backends" optional = false python-versions = "<4.0.0,>=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "oaklib-0.6.19-py3-none-any.whl", hash = "sha256:8b31cacfc525d00b66bf5953a7b3dfbae000b3d115ec9c4e4aad51b49a577840"}, {file = "oaklib-0.6.19.tar.gz", hash = "sha256:6ce85ddc5076e1a5f5e2a56a80e85eb712817052d61eb174cabc2bffe05561a2"}, @@ -3144,6 +3434,8 @@ version = "3.2.2" description = "A generic, spec-compliant, thorough implementation of the OAuth request-signing logic" optional = false python-versions = ">=3.6" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "oauthlib-3.2.2-py3-none-any.whl", hash = "sha256:8139f29aac13e25d502680e9e19963e83f16838d48a0d71c287fe40e7067fbca"}, {file = "oauthlib-3.2.2.tar.gz", hash = "sha256:9859c40929662bec5d64f34d01c99e093149682a3f38915dc0655d5a633dd918"}, @@ -3160,6 +3452,8 @@ version = "0.1.4" description = "A client to the EBI Ontology Lookup Service" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ols_client-0.1.4-py3-none-any.whl", hash = "sha256:7bdca0590042e07cc7ee3ef3fba99c3b6862cde6c8835afb129de31284b3e010"}, {file = "ols_client-0.1.4.tar.gz", hash = "sha256:cd2a0f39107f39eaf0f40b9098f12d442cf3d43e28228e63feb407d0aeb44470"}, @@ -3182,6 +3476,8 @@ version = "0.3.3" description = "COGS Operates Google Sheets" optional = false python-versions = ">=3.6, <4" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ontodev-cogs-0.3.3.tar.gz", hash = "sha256:04cf448eda59e0645c6626453f7617a6b2be3129c8586c4d4a515ad031f61a18"}, {file = "ontodev_cogs-0.3.3-py3-none-any.whl", hash = "sha256:b3299b7884891d00e016f9cb0329a1a0dc8af4bfba45dce3815f654360b1f333"}, @@ -3203,6 +3499,8 @@ version = "0.0.4" description = "A client to BioPortal and other OntoPortal instances." optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ontoportal_client-0.0.4-py3-none-any.whl", hash = "sha256:0dedd4ce003e0b6c1128fa05101e57bcc128ad79a6c9fcae66037d2447706c4c"}, {file = "ontoportal_client-0.0.4.tar.gz", hash = "sha256:1bf7edcb94db3ed68ea9a64c620056f0517f7e209826b05dbfda8fe27384fa48"}, @@ -3222,6 +3520,8 @@ version = "1.61.1" description = "The official Python library for the openai API" optional = true python-versions = ">=3.8" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "openai-1.61.1-py3-none-any.whl", hash = "sha256:72b0826240ce26026ac2cd17951691f046e5be82ad122d20a8e1b30ca18bd11e"}, {file = "openai-1.61.1.tar.gz", hash = "sha256:ce1851507218209961f89f3520e06726c0aa7d0512386f0f977e3ac3e4f2472e"}, @@ -3247,6 +3547,8 @@ version = "3.1.5" description = "A Python library to read/write Excel 2010 xlsx/xlsm files" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "openpyxl-3.1.5-py2.py3-none-any.whl", hash = "sha256:5282c12b107bffeef825f4617dc029afaf41d0ea60823bbb665ef3079dc79de2"}, {file = "openpyxl-3.1.5.tar.gz", hash = "sha256:cf0e3cf56142039133628b5acffe8ef0c12bc902d2aadd3e0fe5878dc08d1050"}, @@ -3261,6 +3563,8 @@ version = "7.7.0" description = "A decorator to automatically detect mismatch when overriding a method." optional = false python-versions = ">=3.6" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "overrides-7.7.0-py3-none-any.whl", hash = "sha256:c7ed9d062f78b8e4c1a7b70bd8796b35ead4d9f510227ef9c5dc7626c60d7e49"}, {file = "overrides-7.7.0.tar.gz", hash = "sha256:55158fa3d93b98cc75299b1e67078ad9003ca27945c76162c1c0766d6f91820a"}, @@ -3272,6 +3576,8 @@ version = "24.2" description = "Core utilities for Python packages" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "packaging-24.2-py3-none-any.whl", hash = "sha256:09abb1bccd265c01f4a3aa3f7a7db064b36514d2cba19a2f694fe6150451a759"}, {file = "packaging-24.2.tar.gz", hash = "sha256:c228a6dc5e932d346bc5739379109d49e8853dd8223571c7c5b55260edc0b97f"}, @@ -3283,6 +3589,8 @@ version = "2.2.3" description = "Powerful data structures for data analysis, time series, and statistics" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pandas-2.2.3-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:1948ddde24197a0f7add2bdc4ca83bf2b1ef84a1bc8ccffd95eda17fd836ecb5"}, {file = "pandas-2.2.3-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:381175499d3802cde0eabbaf6324cce0c4f5d52ca6f8c377c29ad442f50f6348"}, @@ -3369,6 +3677,8 @@ version = "0.22.1" description = "A light-weight and flexible data validation and testing tool for statistical data objects." optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pandera-0.22.1-py3-none-any.whl", hash = "sha256:2a35531b4b533ac83e606a6dcc3cd41561774ff3d872117228e931f22e72f330"}, {file = "pandera-0.22.1.tar.gz", hash = "sha256:091ebc353383ba642e5a20ee0df763ed2059ab99cb4b2ac3e83f482de8493645"}, @@ -3403,6 +3713,8 @@ version = "1.5.1" description = "Utilities for writing pandoc filters in python" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pandocfilters-1.5.1-py2.py3-none-any.whl", hash = "sha256:93be382804a9cdb0a7267585f157e5d1731bbe5545a85b268d6f5fe6232de2bc"}, {file = "pandocfilters-1.5.1.tar.gz", hash = "sha256:002b4a555ee4ebc03f8b66307e287fa492e4a77b4ea14d3f934328297bb4939e"}, @@ -3414,6 +3726,8 @@ version = "0.0.1" description = "sqldf for pandas" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pansql-0.0.1-py3-none-any.whl", hash = "sha256:0c49d8c23e418ac065af767ed350c544c0d6d96dc04e2faa1f8b37851d404988"}, {file = "pansql-0.0.1.tar.gz", hash = "sha256:61091112442c5d663ea5c042b6327a9b6b94c6687831677dddda46f292532e29"}, @@ -3430,6 +3744,8 @@ version = "1.20.2" description = "parse() is the opposite of format()" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "parse-1.20.2-py2.py3-none-any.whl", hash = "sha256:967095588cb802add9177d0c0b6133b5ba33b1ea9007ca800e526f42a85af558"}, {file = "parse-1.20.2.tar.gz", hash = "sha256:b41d604d16503c79d81af5165155c0b20f6c8d6c559efa66b4b695c3e5a0a0ce"}, @@ -3441,6 +3757,8 @@ version = "0.8.4" description = "A Python Parser" optional = false python-versions = ">=3.6" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "parso-0.8.4-py2.py3-none-any.whl", hash = "sha256:a418670a20291dacd2dddc80c377c5c3791378ee1e8d12bffc35420643d43f18"}, {file = "parso-0.8.4.tar.gz", hash = "sha256:eb3a7b58240fb99099a345571deecc0f9540ea5f4dd2fe14c2a99d6b281ab92d"}, @@ -3456,6 +3774,8 @@ version = "4.9.0" description = "Pexpect allows easy control of interactive console applications." optional = false python-versions = "*" +groups = ["dev"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and sys_platform != \"win32\"" files = [ {file = "pexpect-4.9.0-py2.py3-none-any.whl", hash = "sha256:7236d1e080e4936be2dc3e326cec0af72acf9212a7e1d060210e70a47e253523"}, {file = "pexpect-4.9.0.tar.gz", hash = "sha256:ee7d41123f3c9911050ea2c2dac107568dc43b2d3b0c7557a33212c398ead30f"}, @@ -3470,6 +3790,8 @@ version = "25.0" description = "The PyPA recommended tool for installing Python packages." optional = true python-versions = ">=3.8" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "pip-25.0-py3-none-any.whl", hash = "sha256:b6eb97a803356a52b2dd4bb73ba9e65b2ba16caa6bcb25a7497350a4e5859b65"}, {file = "pip-25.0.tar.gz", hash = "sha256:8e0a97f7b4c47ae4a494560da84775e9e2f671d415d8d828e052efefb206b30b"}, @@ -3481,6 +3803,8 @@ version = "4.3.6" description = "A small Python package for determining appropriate platform-specific dirs, e.g. a `user data dir`." optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "platformdirs-4.3.6-py3-none-any.whl", hash = "sha256:73e575e1408ab8103900836b97580d5307456908a03e92031bab39e4554cc3fb"}, {file = "platformdirs-4.3.6.tar.gz", hash = "sha256:357fb2acbc885b0419afd3ce3ed34564c13c9b95c89360cd9563f73aa5e2b907"}, @@ -3497,6 +3821,8 @@ version = "1.5.0" description = "plugin and hook calling mechanisms for python" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pluggy-1.5.0-py3-none-any.whl", hash = "sha256:44e1ad92c8ca002de6377e165f3e0f1be63266ab4d554740532335b9d75ea669"}, {file = "pluggy-1.5.0.tar.gz", hash = "sha256:2cffa88e94fdc978c4c574f15f9e59b7f4201d439195c3715ca9e2486f1d0cf1"}, @@ -3512,6 +3838,8 @@ version = "3.11" description = "Python Lex & Yacc" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ply-3.11-py2.py3-none-any.whl", hash = "sha256:096f9b8350b65ebd2fd1346b12452efe5b9607f7482813ffca50c22722a807ce"}, {file = "ply-3.11.tar.gz", hash = "sha256:00c7c1aaa88358b9c765b6d3000c6eec0ba42abca5351b095321aef446081da3"}, @@ -3523,6 +3851,8 @@ version = "0.1.12" description = "A python API for working with ID prefixes" optional = false python-versions = ">=3.7,<4.0" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "prefixcommons-0.1.12-py3-none-any.whl", hash = "sha256:16dbc0a1f775e003c724f19a694fcfa3174608f5c8b0e893d494cf8098ac7f8b"}, {file = "prefixcommons-0.1.12.tar.gz", hash = "sha256:22c4e2d37b63487b3ab48f0495b70f14564cb346a15220f23919eb0c1851f69f"}, @@ -3540,6 +3870,8 @@ version = "0.2.6" description = "A python library for retrieving semantic prefix maps" optional = false python-versions = "<4.0,>=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "prefixmaps-0.2.6-py3-none-any.whl", hash = "sha256:f6cef28a7320fc6337cf411be212948ce570333a0ce958940ef684c7fb192a62"}, {file = "prefixmaps-0.2.6.tar.gz", hash = "sha256:7421e1244eea610217fa1ba96c9aebd64e8162a930dc0626207cd8bf62ecf4b9"}, @@ -3555,6 +3887,8 @@ version = "0.21.1" description = "Python client for the Prometheus monitoring system." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "prometheus_client-0.21.1-py3-none-any.whl", hash = "sha256:594b45c410d6f4f8888940fe80b5cc2521b305a1fafe1c58609ef715a001f301"}, {file = "prometheus_client-0.21.1.tar.gz", hash = "sha256:252505a722ac04b0456be05c05f75f45d760c2911ffc45f2a06bcaed9f3ae3fb"}, @@ -3569,6 +3903,8 @@ version = "3.0.50" description = "Library for building powerful interactive command lines in Python" optional = false python-versions = ">=3.8.0" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "prompt_toolkit-3.0.50-py3-none-any.whl", hash = "sha256:9b6427eb19e479d98acff65196a307c555eb567989e6d88ebbb1b509d9779198"}, {file = "prompt_toolkit-3.0.50.tar.gz", hash = "sha256:544748f3860a2623ca5cd6d2795e7a14f3d0e1c3c9728359013f79877fc89bab"}, @@ -3583,6 +3919,8 @@ version = "2.5.8" description = "Python frontend to ontologies." optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pronto-2.5.8-py2.py3-none-any.whl", hash = "sha256:91445cd2c2000729e9b23be47b1e142fd967239700284f1375ee2b78d54a3416"}, {file = "pronto-2.5.8.tar.gz", hash = "sha256:5283ec5b35ddc12d34f2e50098b9900bb7b80172b7f769ccc93f5d82b7022799"}, @@ -3600,6 +3938,8 @@ version = "1.26.0" description = "Beautiful, Pythonic protocol buffers" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "proto_plus-1.26.0-py3-none-any.whl", hash = "sha256:bf2dfaa3da281fc3187d12d224c707cb57214fb2c22ba854eb0c105a3fb2d4d7"}, {file = "proto_plus-1.26.0.tar.gz", hash = "sha256:6e93d5f5ca267b54300880fff156b6a3386b3fa3f43b1da62e680fc0c586ef22"}, @@ -3617,6 +3957,8 @@ version = "5.29.3" description = "" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "protobuf-5.29.3-cp310-abi3-win32.whl", hash = "sha256:3ea51771449e1035f26069c4c7fd51fba990d07bc55ba80701c78f886bf9c888"}, {file = "protobuf-5.29.3-cp310-abi3-win_amd64.whl", hash = "sha256:a4fa6f80816a9a0678429e84973f2f98cbc218cca434abe8db2ad0bffc98503a"}, @@ -3637,6 +3979,8 @@ version = "6.1.1" description = "Cross-platform lib for process and system monitoring in Python." optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = 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"sha256:bb89f0a835bcfc1d42ccd5f41f04870c1b936d8507c6df12b7737febc40f0909"}, {file = "psycopg2_binary-2.9.10-cp313-cp313-musllinux_1_2_ppc64le.whl", hash = "sha256:f0c2d907a1e102526dd2986df638343388b94c33860ff3bbe1384130828714b1"}, {file = "psycopg2_binary-2.9.10-cp313-cp313-musllinux_1_2_x86_64.whl", hash = "sha256:f8157bed2f51db683f31306aa497311b560f2265998122abe1dce6428bd86567"}, + {file = "psycopg2_binary-2.9.10-cp313-cp313-win_amd64.whl", hash = "sha256:27422aa5f11fbcd9b18da48373eb67081243662f9b46e6fd07c3eb46e4535142"}, {file = "psycopg2_binary-2.9.10-cp38-cp38-macosx_12_0_x86_64.whl", hash = "sha256:eb09aa7f9cecb45027683bb55aebaaf45a0df8bf6de68801a6afdc7947bb09d4"}, {file = "psycopg2_binary-2.9.10-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:b73d6d7f0ccdad7bc43e6d34273f70d587ef62f824d7261c4ae9b8b1b6af90e8"}, {file = "psycopg2_binary-2.9.10-cp38-cp38-manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:ce5ab4bf46a211a8e924d307c1b1fcda82368586a19d0a24f8ae166f5c784864"}, @@ -3743,6 +4090,8 @@ version = "0.7.0" description = "Run a subprocess in a pseudo terminal" optional = false python-versions = "*" +groups = ["dev"] +markers = "(os_name != \"nt\" or sys_platform != \"win32\") and (python_version <= \"3.11\" or python_version >= \"3.12\")" files = [ {file = "ptyprocess-0.7.0-py2.py3-none-any.whl", hash = "sha256:4b41f3967fce3af57cc7e94b888626c18bf37a083e3651ca8feeb66d492fef35"}, {file = "ptyprocess-0.7.0.tar.gz", hash = "sha256:5c5d0a3b48ceee0b48485e0c26037c0acd7d29765ca3fbb5cb3831d347423220"}, @@ -3754,6 +4103,8 @@ version = "0.2.3" description = "Safely evaluate AST nodes without side effects" optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pure_eval-0.2.3-py3-none-any.whl", hash = "sha256:1db8e35b67b3d218d818ae653e27f06c3aa420901fa7b081ca98cbedc874e0d0"}, {file = "pure_eval-0.2.3.tar.gz", hash = "sha256:5f4e983f40564c576c7c8635ae88db5956bb2229d7e9237d03b3c0b0190eaf42"}, @@ -3768,6 +4119,8 @@ version = "1.28" description = "Pure python implementation of magic file detection" optional = true python-versions = "*" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "puremagic-1.28-py3-none-any.whl", hash = "sha256:e16cb9708ee2007142c37931c58f07f7eca956b3472489106a7245e5c3aa1241"}, {file = "puremagic-1.28.tar.gz", hash = "sha256:195893fc129657f611b86b959aab337207d6df7f25372209269ed9e303c1a8c0"}, @@ -3779,6 +4132,8 @@ version = "0.6.1" description = "Pure-Python implementation of ASN.1 types and DER/BER/CER codecs (X.208)" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pyasn1-0.6.1-py3-none-any.whl", hash = "sha256:0d632f46f2ba09143da3a8afe9e33fb6f92fa2320ab7e886e2d0f7672af84629"}, {file = "pyasn1-0.6.1.tar.gz", hash = "sha256:6f580d2bdd84365380830acf45550f2511469f673cb4a5ae3857a3170128b034"}, @@ -3790,6 +4145,8 @@ version = "0.4.1" description = "A collection of ASN.1-based protocols modules" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pyasn1_modules-0.4.1-py3-none-any.whl", hash = "sha256:49bfa96b45a292b711e986f222502c1c9a5e1f4e568fc30e2574a6c7d07838fd"}, {file = "pyasn1_modules-0.4.1.tar.gz", hash = "sha256:c28e2dbf9c06ad61c71a075c7e0f9fd0f1b0bb2d2ad4377f240d33ac2ab60a7c"}, @@ -3804,6 +4161,8 @@ version = "2.22" description = "C parser in Python" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pycparser-2.22-py3-none-any.whl", hash = "sha256:c3702b6d3dd8c7abc1afa565d7e63d53a1d0bd86cdc24edd75470f4de499cfcc"}, {file = "pycparser-2.22.tar.gz", hash = "sha256:491c8be9c040f5390f5bf44a5b07752bd07f56edf992381b05c701439eec10f6"}, @@ -3815,6 +4174,8 @@ version = "2.10.6" description = "Data validation using Python type hints" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pydantic-2.10.6-py3-none-any.whl", hash = "sha256:427d664bf0b8a2b34ff5dd0f5a18df00591adcee7198fbd71981054cef37b584"}, {file = "pydantic-2.10.6.tar.gz", hash = "sha256:ca5daa827cce33de7a42be142548b0096bf05a7e7b365aebfa5f8eeec7128236"}, @@ -3835,6 +4196,8 @@ version = "2.27.2" description = "Core functionality for Pydantic validation and serialization" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pydantic_core-2.27.2-cp310-cp310-macosx_10_12_x86_64.whl", hash = "sha256:2d367ca20b2f14095a8f4fa1210f5a7b78b8a20009ecced6b12818f455b1e9fa"}, {file = "pydantic_core-2.27.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:491a2b73db93fab69731eaee494f320faa4e093dbed776be1a829c2eb222c34c"}, @@ -3947,6 +4310,8 @@ version = "1.1.3" description = "Python parser and builder for DBML" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pydbml-1.1.3-py3-none-any.whl", hash = "sha256:96453dbfa898751aa07b99dcfe9425ba9f5869fc5fc0755215aea7a9ecdaf730"}, {file = "pydbml-1.1.3.tar.gz", hash = "sha256:a0979b938143a6303470d9ce3b4c27ff353eaa1992e4406821ebce5db9d7d739"}, @@ -3961,6 +4326,8 @@ version = "2.19.1" description = "Pygments is a syntax highlighting package written in Python." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pygments-2.19.1-py3-none-any.whl", hash = "sha256:9ea1544ad55cecf4b8242fab6dd35a93bbce657034b0611ee383099054ab6d8c"}, {file = "pygments-2.19.1.tar.gz", hash = "sha256:61c16d2a8576dc0649d9f39e089b5f02bcd27fba10d8fb4dcc28173f7a45151f"}, @@ -3975,6 +4342,8 @@ version = "0.11.10" description = "Python JSON Schema Grammar interpreter" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyJSG-0.11.10-py3-none-any.whl", hash = "sha256:10af60ff42219be7e85bf7f11c19b648715b0b29eb2ddbd269e87069a7c3f26d"}, {file = "PyJSG-0.11.10.tar.gz", hash = "sha256:4bd6e3ff2833fa2b395bbe803a2d72a5f0bab5b7285bccd0da1a1bc0aee88bfa"}, @@ -3990,6 +4359,8 @@ version = "3.2.1" description = "pyparsing module - Classes and methods to define and execute parsing grammars" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pyparsing-3.2.1-py3-none-any.whl", hash = "sha256:506ff4f4386c4cec0590ec19e6302d3aedb992fdc02c761e90416f158dacf8e1"}, {file = "pyparsing-3.2.1.tar.gz", hash = "sha256:61980854fd66de3a90028d679a954d5f2623e83144b5afe5ee86f43d762e5f0a"}, @@ -4004,6 +4375,8 @@ version = "3.5.4" description = "A python implementation of GNU readline." optional = true python-versions = ">=3.8" +groups = ["main"] +markers = "extra == \"llm\" and sys_platform == \"win32\" and (python_version <= \"3.11\" or python_version >= \"3.12\")" files = [ {file = "pyreadline3-3.5.4-py3-none-any.whl", hash = "sha256:eaf8e6cc3c49bcccf145fc6067ba8643d1df34d604a1ec0eccbf7a18e6d3fae6"}, {file = "pyreadline3-3.5.4.tar.gz", hash = "sha256:8d57d53039a1c75adba8e50dd3d992b28143480816187ea5efbd5c78e6c885b7"}, @@ -4018,6 +4391,8 @@ version = "0.8.1" description = "Python ShEx Implementation" optional = false python-versions = ">=3.6" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyShEx-0.8.1-py3-none-any.whl", hash = "sha256:6da1b10123e191abf8dcb6bf3e54aa3e1fcf771df5d1a0ed453217c8900c8e6a"}, {file = "PyShEx-0.8.1.tar.gz", hash = "sha256:3c5c4d45fe27faaadae803cb008c41acf8ee784da7868b04fd84967e75be70d0"}, @@ -4040,6 +4415,8 @@ version = "0.9.1" description = "PyShExC - Python ShEx compiler" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyShExC-0.9.1-py2.py3-none-any.whl", hash = "sha256:efc55ed5cb2453e9df569b03e282505e96bb06597934288f3b23dd980ef10028"}, {file = "PyShExC-0.9.1.tar.gz", hash = "sha256:35a9975d4b9afeb20ef710fb6680871756381d0c39fbb5470b3b506581a304d3"}, @@ -4059,6 +4436,8 @@ version = "3.10.0" description = "Lightweight Python client for Apache Solr" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pysolr-3.10.0.tar.gz", hash = "sha256:127b4a2dd169234acb1586643a6cd1e3e94b917921e69bf569d7b2a2aa0ef409"}, ] @@ -4076,6 +4455,8 @@ version = "0.7.0" description = "Easily pick a place to store data for your Python code" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pystow-0.7.0-py3-none-any.whl", hash = "sha256:5b6ed4b322a625f0163471f76989bae3b870fd20d64fed55a9150c68d34eb39d"}, {file = "pystow-0.7.0.tar.gz", hash = "sha256:5f8935a76d5f03b0645bedbe5dfcb3b777a0e755fda3e3fd3e4be7a1d2d058d0"}, @@ -4101,6 +4482,8 @@ version = "8.3.4" description = "pytest: simple powerful testing with Python" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pytest-8.3.4-py3-none-any.whl", hash = "sha256:50e16d954148559c9a74109af1eaf0c945ba2d8f30f0a3d3335edde19788b6f6"}, {file = "pytest-8.3.4.tar.gz", hash = "sha256:965370d062bce11e73868e0335abac31b4d3de0e82f4007408d242b4f8610761"}, @@ -4123,6 +4506,8 @@ version = "2015.11.4" description = "Configures logging and allows tweaking the log level with a py.test flag" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pytest-logging-2015.11.4.tar.gz", hash = "sha256:cec5c85ecf18aab7b2ead5498a31b9f758680ef5a902b9054ab3f2bdbb77c896"}, ] @@ -4136,6 +4521,8 @@ version = "2.9.0.post0" description = "Extensions to the standard Python datetime module" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "python-dateutil-2.9.0.post0.tar.gz", hash = "sha256:37dd54208da7e1cd875388217d5e00ebd4179249f90fb72437e91a35459a0ad3"}, {file = "python_dateutil-2.9.0.post0-py2.py3-none-any.whl", hash = "sha256:a8b2bc7bffae282281c8140a97d3aa9c14da0b136dfe83f850eea9a5f7470427"}, @@ -4150,6 +4537,8 @@ version = "3.2.1" description = "JSON Log Formatter for the Python Logging Package" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "python_json_logger-3.2.1-py3-none-any.whl", hash = "sha256:cdc17047eb5374bd311e748b42f99d71223f3b0e186f4206cc5d52aefe85b090"}, {file = "python_json_logger-3.2.1.tar.gz", hash = "sha256:8eb0554ea17cb75b05d2848bc14fb02fbdbd9d6972120781b974380bfa162008"}, @@ -4167,6 +4556,8 @@ version = "3.0.0" description = "Universally unique lexicographically sortable identifier" optional = true python-versions = ">=3.9" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "python_ulid-3.0.0-py3-none-any.whl", hash = "sha256:e4c4942ff50dbd79167ad01ac725ec58f924b4018025ce22c858bfcff99a5e31"}, {file = "python_ulid-3.0.0.tar.gz", hash = "sha256:e50296a47dc8209d28629a22fc81ca26c00982c78934bd7766377ba37ea49a9f"}, @@ -4181,6 +4572,8 @@ version = "0.4.0" description = "A pure Python implementation of the trie data structure." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyTrie-0.4.0-py3-none-any.whl", hash = "sha256:f687c224ee8c66cda8e8628a903011b692635ffbb08d4b39c5f92b18eb78c950"}, {file = "PyTrie-0.4.0.tar.gz", hash = "sha256:8f4488f402d3465993fb6b6efa09866849ed8cda7903b50647b7d0342b805379"}, @@ -4195,6 +4588,8 @@ version = "2025.1" description = "World timezone definitions, modern and historical" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pytz-2025.1-py2.py3-none-any.whl", hash = "sha256:89dd22dca55b46eac6eda23b2d72721bf1bdfef212645d81513ef5d03038de57"}, {file = "pytz-2025.1.tar.gz", hash = "sha256:c2db42be2a2518b28e65f9207c4d05e6ff547d1efa4086469ef855e4ab70178e"}, @@ -4206,6 +4601,8 @@ version = "308" description = "Python for Window Extensions" optional = false python-versions = "*" +groups = ["dev"] +markers = "sys_platform == \"win32\" and platform_python_implementation != \"PyPy\" and (python_version <= \"3.11\" or python_version >= \"3.12\")" files = [ {file = "pywin32-308-cp310-cp310-win32.whl", hash = "sha256:796ff4426437896550d2981b9c2ac0ffd75238ad9ea2d3bfa67a1abd546d262e"}, {file = "pywin32-308-cp310-cp310-win_amd64.whl", hash = "sha256:4fc888c59b3c0bef905ce7eb7e2106a07712015ea1c8234b703a088d46110e8e"}, @@ -4233,6 +4630,8 @@ version = "2.0.15" description = "Pseudo terminal support for Windows from Python." optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and os_name == \"nt\"" files = [ {file = "pywinpty-2.0.15-cp310-cp310-win_amd64.whl", hash = "sha256:8e7f5de756a615a38b96cd86fa3cd65f901ce54ce147a3179c45907fa11b4c4e"}, {file = "pywinpty-2.0.15-cp311-cp311-win_amd64.whl", hash = "sha256:9a6bcec2df2707aaa9d08b86071970ee32c5026e10bcc3cc5f6f391d85baf7ca"}, @@ -4249,6 +4648,8 @@ version = "6.0.2" description = "YAML parser and emitter for Python" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyYAML-6.0.2-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:0a9a2848a5b7feac301353437eb7d5957887edbf81d56e903999a75a3d743086"}, {file = "PyYAML-6.0.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:29717114e51c84ddfba879543fb232a6ed60086602313ca38cce623c1d62cfbf"}, @@ -4311,6 +4712,8 @@ version = "26.2.1" description = "Python bindings for 0MQ" optional = false python-versions = ">=3.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pyzmq-26.2.1-cp310-cp310-macosx_10_15_universal2.whl", hash = "sha256:f39d1227e8256d19899d953e6e19ed2ccb689102e6d85e024da5acf410f301eb"}, {file = "pyzmq-26.2.1-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:a23948554c692df95daed595fdd3b76b420a4939d7a8a28d6d7dea9711878641"}, @@ -4432,6 +4835,8 @@ version = "0.9.2" description = "Extract quantities from unstructured text." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "quantulum3-0.9.2-py3-none-any.whl", hash = "sha256:bc56c2ee9c96a391b1660d0134d401515e6ea676cbd1a05d8e75195917216077"}, {file = "quantulum3-0.9.2.tar.gz", hash = "sha256:797b5d94c52d23107010838fbf2d3bb4f15630f4e90556401bdb042a1c12fc1e"}, @@ -4450,6 +4855,8 @@ version = "2.2.1" description = "API rate limit decorator" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ratelimit-2.2.1.tar.gz", hash = "sha256:af8a9b64b821529aca09ebaf6d8d279100d766f19e90b5059ac6a718ca6dee42"}, ] @@ -4460,6 +4867,8 @@ version = "7.1.3" description = "RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information." optional = false python-versions = "<4.0.0,>=3.8.1" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rdflib-7.1.3-py3-none-any.whl", hash = "sha256:5402310a9f0f3c07d453d73fd0ad6ba35616286fe95d3670db2b725f3f539673"}, {file = "rdflib-7.1.3.tar.gz", hash = "sha256:f3dcb4c106a8cd9e060d92f43d593d09ebc3d07adc244f4c7315856a12e383ee"}, @@ -4482,6 +4891,8 @@ version = "0.6.1" description = "rdflib extension adding JSON-LD parser and serializer" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rdflib-jsonld-0.6.1.tar.gz", hash = "sha256:eda5a42a2e09f80d4da78e32b5c684bccdf275368f1541e6b7bcddfb1382a0e0"}, {file = "rdflib_jsonld-0.6.1-py2.py3-none-any.whl", hash = "sha256:bcf84317e947a661bae0a3f2aee1eced697075fc4ac4db6065a3340ea0f10fc2"}, @@ -4496,6 +4907,8 @@ version = "1.0.3" description = "Shim for rdflib 5 and 6 incompatibilities" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rdflib_shim-1.0.3-py3-none-any.whl", hash = "sha256:7a853e7750ef1e9bf4e35dea27d54e02d4ed087de5a9e0c329c4a6d82d647081"}, {file = "rdflib_shim-1.0.3.tar.gz", hash = "sha256:d955d11e2986aab42b6830ca56ac6bc9c893abd1d049a161c6de2f1b99d4fc0d"}, @@ -4511,6 +4924,8 @@ version = "0.36.2" description = "JSON Referencing + Python" optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "referencing-0.36.2-py3-none-any.whl", hash = "sha256:e8699adbbf8b5c7de96d8ffa0eb5c158b3beafce084968e2ea8bb08c6794dcd0"}, {file = "referencing-0.36.2.tar.gz", hash = "sha256:df2e89862cd09deabbdba16944cc3f10feb6b3e6f18e902f7cc25609a34775aa"}, @@ -4527,6 +4942,8 @@ version = "2.32.3" description = "Python HTTP for Humans." optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requests-2.32.3-py3-none-any.whl", hash = "sha256:70761cfe03c773ceb22aa2f671b4757976145175cdfca038c02654d061d6dcc6"}, {file = "requests-2.32.3.tar.gz", hash = "sha256:55365417734eb18255590a9ff9eb97e9e1da868d4ccd6402399eaf68af20a760"}, @@ -4548,6 +4965,8 @@ version = "1.2.1" description = "A persistent cache for python requests" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requests_cache-1.2.1-py3-none-any.whl", hash = "sha256:1285151cddf5331067baa82598afe2d47c7495a1334bfe7a7d329b43e9fd3603"}, {file = "requests_cache-1.2.1.tar.gz", hash = "sha256:68abc986fdc5b8d0911318fbb5f7c80eebcd4d01bfacc6685ecf8876052511d1"}, @@ -4578,6 +4997,8 @@ version = "2.0.0" description = "OAuthlib authentication support for Requests." optional = false python-versions = ">=3.4" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requests-oauthlib-2.0.0.tar.gz", hash = "sha256:b3dffaebd884d8cd778494369603a9e7b58d29111bf6b41bdc2dcd87203af4e9"}, {file = "requests_oauthlib-2.0.0-py2.py3-none-any.whl", hash = "sha256:7dd8a5c40426b779b0868c404bdef9768deccf22749cde15852df527e6269b36"}, @@ -4596,6 +5017,8 @@ version = "1.0.0" description = "A utility belt for advanced users of python-requests" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requests-toolbelt-1.0.0.tar.gz", hash = "sha256:7681a0a3d047012b5bdc0ee37d7f8f07ebe76ab08caeccfc3921ce23c88d5bc6"}, {file = "requests_toolbelt-1.0.0-py2.py3-none-any.whl", hash = "sha256:cccfdd665f0a24fcf4726e690f65639d272bb0637b9b92dfd91a5568ccf6bd06"}, @@ -4610,6 +5033,8 @@ version = "0.11.0" description = "This is a small Python module for parsing Pip requirement files." optional = false python-versions = "<4.0,>=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requirements_parser-0.11.0-py3-none-any.whl", hash = "sha256:50379eb50311834386c2568263ae5225d7b9d0867fb55cf4ecc93959de2c2684"}, {file = "requirements_parser-0.11.0.tar.gz", hash = "sha256:35f36dc969d14830bf459803da84f314dc3d17c802592e9e970f63d0359e5920"}, @@ -4625,6 +5050,8 @@ version = "0.1.4" description = "A pure python RFC3339 validator" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rfc3339_validator-0.1.4-py2.py3-none-any.whl", hash = "sha256:24f6ec1eda14ef823da9e36ec7113124b39c04d50a4d3d3a3c2859577e7791fa"}, {file = "rfc3339_validator-0.1.4.tar.gz", hash = "sha256:138a2abdf93304ad60530167e51d2dfb9549521a836871b88d7f4695d0022f6b"}, @@ -4639,6 +5066,8 @@ version = "0.1.1" description = "Pure python rfc3986 validator" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rfc3986_validator-0.1.1-py2.py3-none-any.whl", hash = "sha256:2f235c432ef459970b4306369336b9d5dbdda31b510ca1e327636e01f528bfa9"}, {file = "rfc3986_validator-0.1.1.tar.gz", hash = "sha256:3d44bde7921b3b9ec3ae4e3adca370438eccebc676456449b145d533b240d055"}, @@ -4650,6 +5079,8 @@ version = "1.3.8" description = "Parsing and validation of URIs (RFC 3986) and IRIs (RFC 3987)" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rfc3987-1.3.8-py2.py3-none-any.whl", hash = "sha256:10702b1e51e5658843460b189b185c0366d2cf4cff716f13111b0ea9fd2dce53"}, {file = "rfc3987-1.3.8.tar.gz", hash = "sha256:d3c4d257a560d544e9826b38bc81db676890c79ab9d7ac92b39c7a253d5ca733"}, @@ -4661,6 +5092,8 @@ version = "0.22.3" description = "Python bindings to Rust's persistent data structures (rpds)" optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rpds_py-0.22.3-cp310-cp310-macosx_10_12_x86_64.whl", hash = "sha256:6c7b99ca52c2c1752b544e310101b98a659b720b21db00e65edca34483259967"}, {file = "rpds_py-0.22.3-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:be2eb3f2495ba669d2a985f9b426c1797b7d48d6963899276d22f23e33d47e37"}, @@ -4773,6 +5206,8 @@ version = "4.9" description = "Pure-Python RSA implementation" optional = false python-versions = ">=3.6,<4" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rsa-4.9-py3-none-any.whl", hash = "sha256:90260d9058e514786967344d0ef75fa8727eed8a7d2e43ce9f4bcf1b536174f7"}, {file = "rsa-4.9.tar.gz", hash = "sha256:e38464a49c6c85d7f1351b0126661487a7e0a14a50f1675ec50eb34d4f20ef21"}, @@ -4787,6 +5222,8 @@ version = "0.18.10" description = "ruamel.yaml is a YAML parser/emitter that supports roundtrip preservation of comments, seq/map flow style, and map key order" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ruamel.yaml-0.18.10-py3-none-any.whl", hash = "sha256:30f22513ab2301b3d2b577adc121c6471f28734d3d9728581245f1e76468b4f1"}, {file = "ruamel.yaml-0.18.10.tar.gz", hash = "sha256:20c86ab29ac2153f80a428e1254a8adf686d3383df04490514ca3b79a362db58"}, @@ -4805,6 +5242,8 @@ version = "0.2.12" description = "C version of reader, parser and emitter for ruamel.yaml derived from libyaml" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "platform_python_implementation == \"CPython\" and python_version < \"3.13\" and (python_version <= \"3.11\" or python_version >= \"3.12\")" files = [ {file = "ruamel.yaml.clib-0.2.12-cp310-cp310-macosx_13_0_arm64.whl", hash = "sha256:11f891336688faf5156a36293a9c362bdc7c88f03a8a027c2c1d8e0bcde998e5"}, {file = "ruamel.yaml.clib-0.2.12-cp310-cp310-manylinux2014_aarch64.whl", hash = "sha256:a606ef75a60ecf3d924613892cc603b154178ee25abb3055db5062da811fd969"}, @@ -4860,6 +5299,8 @@ version = "0.3.1" description = "Package to author schemas using spreadsheets" optional = false python-versions = "<4.0,>=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "schemasheets-0.3.1-py3-none-any.whl", hash = "sha256:a42562b5002c3854daf4f3c4c50e91a8c613e6784761358d763d044ef35d2fb1"}, {file = "schemasheets-0.3.1.tar.gz", hash = "sha256:4b5a3dcff03899835e3fefb6fbecc86d33d58e8ded3fd9087c314365da885aa0"}, @@ -4878,6 +5319,8 @@ version = "1.13.1" description = "Fundamental algorithms for scientific computing in Python" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "scipy-1.13.1-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:20335853b85e9a49ff7572ab453794298bcf0354d8068c5f6775a0eabf350aca"}, {file = "scipy-1.13.1-cp310-cp310-macosx_12_0_arm64.whl", hash = "sha256:d605e9c23906d1994f55ace80e0125c587f96c020037ea6aa98d01b4bd2e222f"}, @@ -4920,6 +5363,8 @@ version = "0.4.0" description = "" optional = false python-versions = "<4.0.0,>=3.8.1" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "semsql-0.4.0-py3-none-any.whl", hash = "sha256:a8e5be068a5d6b8b6fd86884019f7054a59a9178592cd149b90bc23ca9f4bf1b"}, {file = "semsql-0.4.0.tar.gz", hash = "sha256:89a3273e3595036a190c7d1bb779a8e144996582d131d9757c5ffbbb8029a3ce"}, @@ -4936,6 +5381,8 @@ version = "1.8.3" description = "Send file to trash natively under Mac OS X, Windows and Linux" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "Send2Trash-1.8.3-py3-none-any.whl", hash = "sha256:0c31227e0bd08961c7665474a3d1ef7193929fedda4233843689baa056be46c9"}, {file = "Send2Trash-1.8.3.tar.gz", hash = "sha256:b18e7a3966d99871aefeb00cfbcfdced55ce4871194810fc71f4aa484b953abf"}, @@ -4952,6 +5399,8 @@ version = "75.8.0" description = "Easily download, build, install, upgrade, and uninstall Python packages" optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "setuptools-75.8.0-py3-none-any.whl", hash = "sha256:e3982f444617239225d675215d51f6ba05f845d4eec313da4418fdbb56fb27e3"}, {file = "setuptools-75.8.0.tar.gz", hash = "sha256:c5afc8f407c626b8313a86e10311dd3f661c6cd9c09d4bf8c15c0e11f9f2b0e6"}, @@ -4972,6 +5421,8 @@ version = "0.8.2" description = "ShExJSG - Astract Syntax Tree for the ShEx 2.0 language" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ShExJSG-0.8.2-py2.py3-none-any.whl", hash = "sha256:3b0d8432dd313bee9e1343382c5e02e9908dd941a7dd7342bf8c0200fe523766"}, {file = "ShExJSG-0.8.2.tar.gz", hash = "sha256:f17a629fc577fa344382bdee143cd9ff86588537f9f811f66cea6f63cdbcd0b6"}, @@ -4986,6 +5437,8 @@ version = "1.17.0" description = "Python 2 and 3 compatibility utilities" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "six-1.17.0-py2.py3-none-any.whl", hash = "sha256:4721f391ed90541fddacab5acf947aa0d3dc7d27b2e1e8eda2be8970586c3274"}, {file = "six-1.17.0.tar.gz", hash = "sha256:ff70335d468e7eb6ec65b95b99d3a2836546063f63acc5171de367e834932a81"}, @@ -4997,10 +5450,12 @@ version = "1.3.1" description = "Sniff out which async library your code is running under" optional = false python-versions = ">=3.7" +groups = ["main", "dev"] files = [ {file = "sniffio-1.3.1-py3-none-any.whl", hash = "sha256:2f6da418d1f1e0fddd844478f41680e794e6051915791a034ff65e5f100525a2"}, {file = "sniffio-1.3.1.tar.gz", hash = "sha256:f4324edc670a0f49750a81b895f35c3adb843cca46f0530f79fc1babb23789dc"}, ] +markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} [[package]] name = "snowballstemmer" @@ -5008,6 +5463,8 @@ version = "2.2.0" description = "This package provides 29 stemmers for 28 languages generated from Snowball algorithms." optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "snowballstemmer-2.2.0-py2.py3-none-any.whl", hash = "sha256:c8e1716e83cc398ae16824e5572ae04e0d9fc2c6b985fb0f900f5f0c96ecba1a"}, {file = "snowballstemmer-2.2.0.tar.gz", hash = "sha256:09b16deb8547d3412ad7b590689584cd0fe25ec8db3be37788be3810cbf19cb1"}, @@ -5019,6 +5476,8 @@ version = "2.4.0" description = "Sorted Containers -- Sorted List, Sorted Dict, Sorted Set" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sortedcontainers-2.4.0-py2.py3-none-any.whl", hash = "sha256:a163dcaede0f1c021485e957a39245190e74249897e2ae4b2aa38595db237ee0"}, {file = "sortedcontainers-2.4.0.tar.gz", hash = "sha256:25caa5a06cc30b6b83d11423433f65d1f9d76c4c6a0c90e3379eaa43b9bfdb88"}, @@ -5030,6 +5489,8 @@ version = "2.6" description = "A modern CSS selector implementation for Beautiful Soup." optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "soupsieve-2.6-py3-none-any.whl", hash = "sha256:e72c4ff06e4fb6e4b5a9f0f55fe6e81514581fca1515028625d0f299c602ccc9"}, {file = "soupsieve-2.6.tar.gz", hash = "sha256:e2e68417777af359ec65daac1057404a3c8a5455bb8abc36f1a9866ab1a51abb"}, @@ -5041,6 +5502,8 @@ version = "0.5.1" description = "SPARQL Slurper for rdflib" optional = false python-versions = ">=3.7.4" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sparqlslurper-0.5.1-py3-none-any.whl", hash = "sha256:ae49b2d8ce3dd38df7a40465b228ad5d33fb7e11b3f248d195f9cadfc9cfff87"}, {file = "sparqlslurper-0.5.1.tar.gz", hash = "sha256:9282ebb064fc6152a58269d194cb1e7b275b0f095425a578d75b96dcc851f546"}, @@ -5057,6 +5520,8 @@ version = "2.0.0" description = "SPARQL Endpoint interface to Python" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "SPARQLWrapper-2.0.0-py3-none-any.whl", hash = "sha256:c99a7204fff676ee28e6acef327dc1ff8451c6f7217dcd8d49e8872f324a8a20"}, {file = "SPARQLWrapper-2.0.0.tar.gz", hash = "sha256:3fed3ebcc77617a4a74d2644b86fd88e0f32e7f7003ac7b2b334c026201731f1"}, @@ -5077,6 +5542,8 @@ version = "7.4.7" description = "Python documentation generator" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinx-7.4.7-py3-none-any.whl", hash = "sha256:c2419e2135d11f1951cd994d6eb18a1835bd8fdd8429f9ca375dc1f3281bd239"}, {file = "sphinx-7.4.7.tar.gz", hash = "sha256:242f92a7ea7e6c5b406fdc2615413890ba9f699114a9c09192d7dfead2ee9cfe"}, @@ -5113,6 +5580,8 @@ version = "6.0.0" description = "Sphinx extension that automatically documents click applications" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinx_click-6.0.0-py3-none-any.whl", hash = "sha256:1e0a3c83bcb7c55497751b19d07ebe56b5d7b85eb76dd399cf9061b497adc317"}, {file = "sphinx_click-6.0.0.tar.gz", hash = "sha256:f5d664321dc0c6622ff019f1e1c84e58ce0cecfddeb510e004cf60c2a3ab465b"}, @@ -5129,6 +5598,8 @@ version = "0.5.0" description = "A cool theme for sphinx documentation" optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinx_pdj_theme-0.5.0.tar.gz", hash = "sha256:376fa8ee574ce49fe85c31eda2da581d44af92b676234ba5eed3d3cd049931b2"}, ] @@ -5139,6 +5610,8 @@ version = "2.0.0" description = "sphinxcontrib-applehelp is a Sphinx extension which outputs Apple help books" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_applehelp-2.0.0-py3-none-any.whl", hash = "sha256:4cd3f0ec4ac5dd9c17ec65e9ab272c9b867ea77425228e68ecf08d6b28ddbdb5"}, {file = "sphinxcontrib_applehelp-2.0.0.tar.gz", hash = "sha256:2f29ef331735ce958efa4734873f084941970894c6090408b079c61b2e1c06d1"}, @@ -5155,6 +5628,8 @@ version = "2.0.0" description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp documents" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_devhelp-2.0.0-py3-none-any.whl", hash = "sha256:aefb8b83854e4b0998877524d1029fd3e6879210422ee3780459e28a1f03a8a2"}, {file = "sphinxcontrib_devhelp-2.0.0.tar.gz", hash = "sha256:411f5d96d445d1d73bb5d52133377b4248ec79db5c793ce7dbe59e074b4dd1ad"}, @@ -5171,6 +5646,8 @@ version = "2.1.0" description = "sphinxcontrib-htmlhelp is a sphinx extension which renders HTML help files" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_htmlhelp-2.1.0-py3-none-any.whl", hash = "sha256:166759820b47002d22914d64a075ce08f4c46818e17cfc9470a9786b759b19f8"}, {file = "sphinxcontrib_htmlhelp-2.1.0.tar.gz", hash = "sha256:c9e2916ace8aad64cc13a0d233ee22317f2b9025b9cf3295249fa985cc7082e9"}, @@ -5187,6 +5664,8 @@ version = "1.0.1" description = "A sphinx extension which renders display math in HTML via JavaScript" optional = false python-versions = ">=3.5" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib-jsmath-1.0.1.tar.gz", hash = "sha256:a9925e4a4587247ed2191a22df5f6970656cb8ca2bd6284309578f2153e0c4b8"}, {file = "sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl", hash = "sha256:2ec2eaebfb78f3f2078e73666b1415417a116cc848b72e5172e596c871103178"}, @@ -5201,6 +5680,8 @@ version = "1.0.0" description = "Mermaid diagrams in yours Sphinx powered docs" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_mermaid-1.0.0-py3-none-any.whl", hash = "sha256:60b72710ea02087f212028feb09711225fbc2e343a10d34822fe787510e1caa3"}, {file = "sphinxcontrib_mermaid-1.0.0.tar.gz", hash = "sha256:2e8ab67d3e1e2816663f9347d026a8dee4a858acdd4ad32dd1c808893db88146"}, @@ -5219,6 +5700,8 @@ version = "2.0.0" description = "sphinxcontrib-qthelp is a sphinx extension which outputs QtHelp documents" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_qthelp-2.0.0-py3-none-any.whl", hash = "sha256:b18a828cdba941ccd6ee8445dbe72ffa3ef8cbe7505d8cd1fa0d42d3f2d5f3eb"}, {file = "sphinxcontrib_qthelp-2.0.0.tar.gz", hash = "sha256:4fe7d0ac8fc171045be623aba3e2a8f613f8682731f9153bb2e40ece16b9bbab"}, @@ -5235,6 +5718,8 @@ version = "2.0.0" description = "sphinxcontrib-serializinghtml is a sphinx extension which outputs \"serialized\" HTML files (json and pickle)" optional = false python-versions = ">=3.9" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_serializinghtml-2.0.0-py3-none-any.whl", hash = "sha256:6e2cb0eef194e10c27ec0023bfeb25badbbb5868244cf5bc5bdc04e4464bf331"}, {file = "sphinxcontrib_serializinghtml-2.0.0.tar.gz", hash = "sha256:e9d912827f872c029017a53f0ef2180b327c3f7fd23c87229f7a8e8b70031d4d"}, @@ -5251,6 +5736,8 @@ version = "2.0.38" description = "Database Abstraction Library" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "SQLAlchemy-2.0.38-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:5e1d9e429028ce04f187a9f522818386c8b076723cdbe9345708384f49ebcec6"}, {file = "SQLAlchemy-2.0.38-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:b87a90f14c68c925817423b0424381f0e16d80fc9a1a1046ef202ab25b19a444"}, @@ -5346,6 +5833,8 @@ version = "0.38.3" description = "Various utility functions for SQLAlchemy." optional = false python-versions = "~=3.6" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "SQLAlchemy-Utils-0.38.3.tar.gz", hash = "sha256:9f9afba607a40455cf703adfa9846584bf26168a0c5a60a70063b70d65051f4d"}, {file = "SQLAlchemy_Utils-0.38.3-py3-none-any.whl", hash = "sha256:5c13b5d08adfaa85f3d4e8ec09a75136216fad41346980d02974a70a77988bf9"}, @@ -5374,6 +5863,8 @@ version = "1.0.3" description = "Python functions for working with SQLite FTS4 search" optional = true python-versions = "*" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "sqlite-fts4-1.0.3.tar.gz", hash = "sha256:78b05eeaf6680e9dbed8986bde011e9c086a06cb0c931b3cf7da94c214e8930c"}, {file = "sqlite_fts4-1.0.3-py3-none-any.whl", hash = "sha256:0359edd8dea6fd73c848989e1e2b1f31a50fe5f9d7272299ff0e8dbaa62d035f"}, @@ -5388,6 +5879,8 @@ version = "0.1b0" description = "A simple database migration system for SQLite, based on sqlite-utils" optional = true python-versions = "*" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "sqlite-migrate-0.1b0.tar.gz", hash = "sha256:8d502b3ca4b9c45e56012bd35c03d23235f0823c976d4ce940cbb40e33087ded"}, {file = "sqlite_migrate-0.1b0-py3-none-any.whl", hash = "sha256:a4125e35e1de3dc56b6b6ec60e9833ce0ce20192b929ddcb2d4246c5098859c6"}, @@ -5405,6 +5898,8 @@ version = "3.38" description = "CLI tool and Python library for manipulating SQLite databases" optional = true python-versions = ">=3.8" +groups = ["main"] +markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" files = [ {file = "sqlite_utils-3.38-py3-none-any.whl", hash = "sha256:8a27441015c3b2ef475f555861f7a2592f73bc60d247af9803a11b65fc605bf9"}, {file = "sqlite_utils-3.38.tar.gz", hash = "sha256:1ae77b931384052205a15478d429464f6c67a3ac3b4eafd3c674ac900f623aab"}, @@ -5431,6 +5926,8 @@ version = "0.4.15" description = "Operations on SSSOM mapping tables" optional = false python-versions = "<4.0.0,>=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sssom-0.4.15-py3-none-any.whl", hash = "sha256:22eca776daaceeaa0a9133504d869c051b4eabb59abe1b5c74a34d23b83e7b0d"}, {file = "sssom-0.4.15.tar.gz", hash = "sha256:588fbd554e5e52a20e7782ad1f0d6a237f5df9bb8494fd6a74f2cf9304aa6397"}, @@ -5459,6 +5956,8 @@ version = "1.0.0" description = "SSSOM is a Simple Standard for Sharing Ontology Mappings." optional = false python-versions = "<4.0.0,>=3.8.1" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sssom_schema-1.0.0-py3-none-any.whl", hash = "sha256:e41031637094eddce7e71d6642e1f7b3f972aae08c0039c1dd27fe5208835d15"}, {file = "sssom_schema-1.0.0.tar.gz", hash = "sha256:62ae18f0f1a7fd10a1d0bfdf1167a8b5761b3f5473bc1e5243005e163aceaec9"}, @@ -5473,6 +5972,8 @@ version = "0.6.3" description = "Extract data from python stack frames and tracebacks for informative displays" optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "stack_data-0.6.3-py3-none-any.whl", hash = "sha256:d5558e0c25a4cb0853cddad3d77da9891a08cb85dd9f9f91b9f8cd66e511e695"}, {file = "stack_data-0.6.3.tar.gz", hash = "sha256:836a778de4fec4dcd1dcd89ed8abff8a221f58308462e1c4aa2a3cf30148f0b9"}, @@ -5492,6 +5993,8 @@ version = "0.2.1" description = "A library implementing different string similarity and distance measures" optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "strsimpy-0.2.1-py3-none-any.whl", hash = "sha256:d676a440d5d3dbcf5ba92d01814a03a218776ce07bd7a8185da7019e04cf9ba7"}, {file = "strsimpy-0.2.1.tar.gz", hash = "sha256:0842eb57f7af86c882a59a1bc8721ec2580a267e563fd0503ced2972040372c9"}, @@ -5503,6 +6006,8 @@ version = "0.9.0" description = "Pretty-print tabular data" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tabulate-0.9.0-py3-none-any.whl", hash = "sha256:024ca478df22e9340661486f85298cff5f6dcdba14f3813e8830015b9ed1948f"}, {file = "tabulate-0.9.0.tar.gz", hash = "sha256:0095b12bf5966de529c0feb1fa08671671b3368eec77d7ef7ab114be2c068b3c"}, @@ -5517,6 +6022,8 @@ version = "9.0.0" description = "Retry code until it succeeds" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tenacity-9.0.0-py3-none-any.whl", hash = "sha256:93de0c98785b27fcf659856aa9f54bfbd399e29969b0621bc7f762bd441b4539"}, {file = "tenacity-9.0.0.tar.gz", hash = "sha256:807f37ca97d62aa361264d497b0e31e92b8027044942bfa756160d908320d73b"}, @@ -5532,6 +6039,8 @@ version = "2.5.0" description = "ANSI color formatting for output in terminal" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "termcolor-2.5.0-py3-none-any.whl", hash = "sha256:37b17b5fc1e604945c2642c872a3764b5d547a48009871aea3edd3afa180afb8"}, {file = "termcolor-2.5.0.tar.gz", hash = "sha256:998d8d27da6d48442e8e1f016119076b690d962507531df4890fcd2db2ef8a6f"}, @@ -5546,6 +6055,8 @@ version = "0.18.1" description = "Tornado websocket backend for the Xterm.js Javascript terminal emulator library." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "terminado-0.18.1-py3-none-any.whl", hash = "sha256:a4468e1b37bb318f8a86514f65814e1afc977cf29b3992a4500d9dd305dcceb0"}, {file = "terminado-0.18.1.tar.gz", hash = "sha256:de09f2c4b85de4765f7714688fff57d3e75bad1f909b589fde880460c753fd2e"}, @@ -5567,6 +6078,8 @@ version = "1.4.0" description = "A tiny CSS parser" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tinycss2-1.4.0-py3-none-any.whl", hash = "sha256:3a49cf47b7675da0b15d0c6e1df8df4ebd96e9394bb905a5775adb0d884c5289"}, {file = "tinycss2-1.4.0.tar.gz", hash = "sha256:10c0972f6fc0fbee87c3edb76549357415e94548c1ae10ebccdea16fb404a9b7"}, @@ -5585,6 +6098,8 @@ version = "2.2.1" description = "A lil' TOML parser" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version < \"3.11\"" files = [ {file = "tomli-2.2.1-cp311-cp311-macosx_10_9_x86_64.whl", hash = "sha256:678e4fa69e4575eb77d103de3df8a895e1591b48e740211bd1067378c69e8249"}, {file = "tomli-2.2.1-cp311-cp311-macosx_11_0_arm64.whl", hash = "sha256:023aa114dd824ade0100497eb2318602af309e5a55595f76b626d6d9f3b7b0a6"}, @@ -5626,6 +6141,8 @@ version = "0.13.2" description = "Style preserving TOML library" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tomlkit-0.13.2-py3-none-any.whl", hash = "sha256:7a974427f6e119197f670fbbbeae7bef749a6c14e793db934baefc1b5f03efde"}, {file = "tomlkit-0.13.2.tar.gz", hash = "sha256:fff5fe59a87295b278abd31bec92c15d9bc4a06885ab12bcea52c71119392e79"}, @@ -5637,6 +6154,8 @@ version = "6.4.2" description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed." optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tornado-6.4.2-cp38-abi3-macosx_10_9_universal2.whl", hash = "sha256:e828cce1123e9e44ae2a50a9de3055497ab1d0aeb440c5ac23064d9e44880da1"}, {file = "tornado-6.4.2-cp38-abi3-macosx_10_9_x86_64.whl", hash = "sha256:072ce12ada169c5b00b7d92a99ba089447ccc993ea2143c9ede887e0937aa803"}, @@ -5657,6 +6176,8 @@ version = "4.67.1" description = "Fast, Extensible Progress Meter" optional = false python-versions = ">=3.7" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tqdm-4.67.1-py3-none-any.whl", hash = "sha256:26445eca388f82e72884e0d580d5464cd801a3ea01e63e5601bdff9ba6a48de2"}, {file = "tqdm-4.67.1.tar.gz", hash = "sha256:f8aef9c52c08c13a65f30ea34f4e5aac3fd1a34959879d7e59e63027286627f2"}, @@ -5678,6 +6199,8 @@ version = "5.14.3" description = "Traitlets Python configuration system" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "traitlets-5.14.3-py3-none-any.whl", hash = "sha256:b74e89e397b1ed28cc831db7aea759ba6640cb3de13090ca145426688ff1ac4f"}, {file = "traitlets-5.14.3.tar.gz", hash = "sha256:9ed0579d3502c94b4b3732ac120375cda96f923114522847de4b3bb98b96b6b7"}, @@ -5693,6 +6216,8 @@ version = "4.4.1" description = "Run-time type checker for Python" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "typeguard-4.4.1-py3-none-any.whl", hash = "sha256:9324ec07a27ec67fc54a9c063020ca4c0ae6abad5e9f0f9804ca59aee68c6e21"}, {file = "typeguard-4.4.1.tar.gz", hash = "sha256:0d22a89d00b453b47c49875f42b6601b961757541a2e1e0ef517b6e24213c21b"}, @@ -5712,6 +6237,8 @@ version = "2.9.0.20241206" description = "Typing stubs for python-dateutil" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "types_python_dateutil-2.9.0.20241206-py3-none-any.whl", hash = "sha256:e248a4bc70a486d3e3ec84d0dc30eec3a5f979d6e7ee4123ae043eedbb987f53"}, {file = "types_python_dateutil-2.9.0.20241206.tar.gz", hash = "sha256:18f493414c26ffba692a72369fea7a154c502646301ebfe3d56a04b3767284cb"}, @@ -5723,6 +6250,8 @@ version = "75.8.0.20250110" description = "Typing stubs for setuptools" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "types_setuptools-75.8.0.20250110-py3-none-any.whl", hash = "sha256:a9f12980bbf9bcdc23ecd80755789085bad6bfce4060c2275bc2b4ca9f2bc480"}, {file = "types_setuptools-75.8.0.20250110.tar.gz", hash = "sha256:96f7ec8bbd6e0a54ea180d66ad68ad7a1d7954e7281a710ea2de75e355545271"}, @@ -5734,6 +6263,8 @@ version = "4.12.2" description = "Backported and Experimental Type Hints for Python 3.8+" optional = false python-versions = ">=3.8" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "typing_extensions-4.12.2-py3-none-any.whl", hash = "sha256:04e5ca0351e0f3f85c6853954072df659d0d13fac324d0072316b67d7794700d"}, {file = "typing_extensions-4.12.2.tar.gz", hash = "sha256:1a7ead55c7e559dd4dee8856e3a88b41225abfe1ce8df57b7c13915fe121ffb8"}, @@ -5745,6 +6276,8 @@ version = "0.9.0" description = "Runtime inspection utilities for typing module." optional = false python-versions = "*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "typing_inspect-0.9.0-py3-none-any.whl", hash = "sha256:9ee6fc59062311ef8547596ab6b955e1b8aa46242d854bfc78f4f6b0eff35f9f"}, {file = "typing_inspect-0.9.0.tar.gz", hash = "sha256:b23fc42ff6f6ef6954e4852c1fb512cdd18dbea03134f91f856a95ccc9461f78"}, @@ -5760,6 +6293,8 @@ version = "2025.1" description = "Provider of IANA time zone data" optional = false python-versions = ">=2" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tzdata-2025.1-py2.py3-none-any.whl", hash = "sha256:7e127113816800496f027041c570f50bcd464a020098a3b6b199517772303639"}, {file = "tzdata-2025.1.tar.gz", hash = "sha256:24894909e88cdb28bd1636c6887801df64cb485bd593f2fd83ef29075a81d694"}, @@ -5771,6 +6306,8 @@ version = "1.3.0" description = "RFC 6570 URI Template Processor" optional = false python-versions = ">=3.7" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "uri-template-1.3.0.tar.gz", hash = "sha256:0e00f8eb65e18c7de20d595a14336e9f337ead580c70934141624b6d1ffdacc7"}, {file = "uri_template-1.3.0-py3-none-any.whl", hash = "sha256:a44a133ea12d44a0c0f06d7d42a52d71282e77e2f937d8abd5655b8d56fc1363"}, @@ -5785,6 +6322,8 @@ version = "4.1.1" description = "Implementation of RFC 6570 URI Templates" optional = false python-versions = ">=3.6" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "uritemplate-4.1.1-py2.py3-none-any.whl", hash = "sha256:830c08b8d99bdd312ea4ead05994a38e8936266f84b9a7878232db50b044e02e"}, {file = "uritemplate-4.1.1.tar.gz", hash = "sha256:4346edfc5c3b79f694bccd6d6099a322bbeb628dbf2cd86eea55a456ce5124f0"}, @@ -5796,6 +6335,8 @@ version = "1.4.3" description = "URL normalization for Python" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "url-normalize-1.4.3.tar.gz", hash = "sha256:d23d3a070ac52a67b83a1c59a0e68f8608d1cd538783b401bc9de2c0fac999b2"}, {file = "url_normalize-1.4.3-py2.py3-none-any.whl", hash = "sha256:ec3c301f04e5bb676d333a7fa162fa977ad2ca04b7e652bfc9fac4e405728eed"}, @@ -5810,6 +6351,8 @@ version = "2.3.0" description = "HTTP library with thread-safe connection pooling, file post, and more." optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "urllib3-2.3.0-py3-none-any.whl", hash = "sha256:1cee9ad369867bfdbbb48b7dd50374c0967a0bb7710050facf0dd6911440e3df"}, {file = "urllib3-2.3.0.tar.gz", hash = "sha256:f8c5449b3cf0861679ce7e0503c7b44b5ec981bec0d1d3795a07f1ba96f0204d"}, @@ -5827,6 +6370,8 @@ version = "0.34.0" description = "Python Data Validation for Humans™" optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "validators-0.34.0-py3-none-any.whl", hash = "sha256:c804b476e3e6d3786fa07a30073a4ef694e617805eb1946ceee3fe5a9b8b1321"}, {file = "validators-0.34.0.tar.gz", hash = "sha256:647fe407b45af9a74d245b943b18e6a816acf4926974278f6dd617778e1e781f"}, @@ -5841,6 +6386,8 @@ version = "6.0.0" description = "Filesystem events monitoring" optional = false python-versions = ">=3.9" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "watchdog-6.0.0-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:d1cdb490583ebd691c012b3d6dae011000fe42edb7a82ece80965b42abd61f26"}, {file = "watchdog-6.0.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:bc64ab3bdb6a04d69d4023b29422170b74681784ffb9463ed4870cf2f3e66112"}, @@ -5883,6 +6430,8 @@ version = "0.2.13" description = "Measures the displayed width of unicode strings in a terminal" optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "wcwidth-0.2.13-py2.py3-none-any.whl", hash = "sha256:3da69048e4540d84af32131829ff948f1e022c1c6bdb8d6102117aac784f6859"}, {file = "wcwidth-0.2.13.tar.gz", hash = "sha256:72ea0c06399eb286d978fdedb6923a9eb47e1c486ce63e9b4e64fc18303972b5"}, @@ -5894,6 +6443,8 @@ version = "24.11.1" description = "A library for working with the color formats defined by HTML and CSS." optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "webcolors-24.11.1-py3-none-any.whl", hash = "sha256:515291393b4cdf0eb19c155749a096f779f7d909f7cceea072791cb9095b92e9"}, {file = "webcolors-24.11.1.tar.gz", hash = "sha256:ecb3d768f32202af770477b8b65f318fa4f566c22948673a977b00d589dd80f6"}, @@ -5905,6 +6456,8 @@ version = "0.5.1" description = "Character encoding aliases for legacy web content" optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "webencodings-0.5.1-py2.py3-none-any.whl", hash = "sha256:a0af1213f3c2226497a97e2b3aa01a7e4bee4f403f95be16fc9acd2947514a78"}, {file = "webencodings-0.5.1.tar.gz", hash = "sha256:b36a1c245f2d304965eb4e0a82848379241dc04b865afcc4aab16748587e1923"}, @@ -5916,6 +6469,8 @@ version = "1.8.0" description = "WebSocket client for Python with low level API options" optional = false python-versions = ">=3.8" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "websocket_client-1.8.0-py3-none-any.whl", hash = "sha256:17b44cc997f5c498e809b22cdf2d9c7a9e71c02c8cc2b6c56e7c2d1239bfa526"}, {file = "websocket_client-1.8.0.tar.gz", hash = "sha256:3239df9f44da632f96012472805d40a23281a991027ce11d2f45a6f24ac4c3da"}, @@ -5932,6 +6487,8 @@ version = "4.0.13" description = "Jupyter interactive widgets for Jupyter Notebook" optional = false python-versions = ">=3.7" +groups = ["dev"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "widgetsnbextension-4.0.13-py3-none-any.whl", hash = "sha256:74b2692e8500525cc38c2b877236ba51d34541e6385eeed5aec15a70f88a6c71"}, {file = "widgetsnbextension-4.0.13.tar.gz", hash = "sha256:ffcb67bc9febd10234a362795f643927f4e0c05d9342c727b65d2384f8feacb6"}, @@ -5943,6 +6500,8 @@ version = "1.17.2" description = "Module for decorators, wrappers and monkey patching." optional = false python-versions = ">=3.8" +groups = ["main"] +markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "wrapt-1.17.2-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:3d57c572081fed831ad2d26fd430d565b76aa277ed1d30ff4d40670b1c0dd984"}, {file = "wrapt-1.17.2-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:b5e251054542ae57ac7f3fba5d10bfff615b6c2fb09abeb37d2f1463f841ae22"}, @@ -6031,6 +6590,8 @@ version = "3.21.0" description = "Backport of pathlib-compatible object wrapper for zip files" optional = false python-versions = ">=3.9" +groups = ["main", "dev"] +markers = "python_version < \"3.10\"" files = [ {file = "zipp-3.21.0-py3-none-any.whl", hash = "sha256:ac1bbe05fd2991f160ebce24ffbac5f6d11d83dc90891255885223d42b3cd931"}, {file = "zipp-3.21.0.tar.gz", hash = "sha256:2c9958f6430a2040341a52eb608ed6dd93ef4392e02ffe219417c1b28b5dd1f4"}, @@ -6052,6 +6613,6 @@ mariadb = ["mariadb"] postgres = ["psycopg2-binary"] [metadata] -lock-version = "2.0" +lock-version = "2.1" python-versions = "^3.9" -content-hash = "c9060878d6892edca9c7fb46a0fcebed9cec12d9d3a2aa5e4f2fe5f9dca810fb" +content-hash = "6875551e277cc703a124e57f84d0fa65ba60e8a77f619f1e5786e6bd4d498b85" From f6601d95ce3bfd0b607619b548a81a784fb18ba2 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Mon, 12 May 2025 12:04:51 -0500 Subject: [PATCH 59/88] Fix 3.9/3.10 workflow breakage --- schema_automator/importers/rdfs_import_engine.py | 15 +++++++-------- 1 file changed, 7 insertions(+), 8 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 16728ec..1d47363 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -1,6 +1,6 @@ import logging from pathlib import Path -from typing import Dict, Iterable, List, Mapping, TextIO, Union +from typing import Any, Dict, Iterable, List, Mapping, Optional, TextIO, Union import typing from collections import defaultdict, Counter @@ -96,13 +96,12 @@ def __post_init__(self): self.slotdef_slots = {s.name for s in sv.class_induced_slots(SlotDefinition.class_name)} def convert( - self, - file: str | Path | TextIO, - name: str | None = None, - format: str | None="turtle", - default_prefix: str | None = None, - model_uri: str | None = None, - identifier: str | None = None, + file: Union[str, Path, TextIO], + name: Optional[str] = None, + format: Optional[str] = "turtle", + default_prefix: Optional[str] = None, + model_uri: Optional[str] = None, + identifier: Optional[str] = None, **kwargs: Any, ) -> SchemaDefinition: """ From fd31c792c9aca128d60d9a312e02da5ecfab307d Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Mon, 12 May 2025 13:10:48 -0500 Subject: [PATCH 60/88] Finish fixing 3.9 based issues --- schema_automator/importers/rdfs_import_engine.py | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 1d47363..c5f7581 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -152,7 +152,13 @@ def convert( self.fix_missing(schema) return schema - def infer_metadata(self, schema: SchemaDefinition, name: str | None, default_prefix: str | None = None, model_uri: str | None = None): + def infer_metadata( + self, + schema: SchemaDefinition, + name: Optional[str] = None, + default_prefix: Optional[str] = None, + model_uri: Optional[str] = None, + ): top_count = self.prefix_counts.most_common(1) if len(top_count) == 0: raise ValueError("No prefixes found in the graph") @@ -312,7 +318,7 @@ def _dict_for_subject(self, g: Graph, s: URIRef, subject_type: typing.Literal["s def _rdfs_metamodel_iri(self, name: str) -> List[URIRef]: return self.metamodel_mappings.get(name, []) - def _element_from_iri(self, iri: URIRef) -> str | None: + def _element_from_iri(self, iri: URIRef) -> Optional[str]: r = self.reverse_metamodel_mappings.get(iri, []) if len(r) > 0: if len(r) > 1: From 8e566a31dcb42a8d1224a03bfbf32494d24eda78 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Tue, 13 May 2025 10:48:57 -0500 Subject: [PATCH 61/88] Fix test failures in RDF --- output.log | 177 ++++++++++++++++++ .../importers/rdfs_import_engine.py | 30 ++- tests/test_importers/test_rdfs_importer.py | 7 +- 3 files changed, 210 insertions(+), 4 deletions(-) create mode 100644 output.log diff --git a/output.log b/output.log new file mode 100644 index 0000000..a94b86e --- /dev/null +++ b/output.log @@ -0,0 +1,177 @@ +============================= test session starts ============================== +platform linux -- Python 3.9.19, pytest-8.3.2, pluggy-1.5.0 +rootdir: /home/corey/Code/schema-automator +configfile: pyproject.toml +plugins: typeguard-4.3.0, anyio-4.4.0 +collected 44 items + +tests/test_annotators/test_bioportal_schema_annotator.py s [ 2%] +tests/test_annotators/test_jsonld_annotator.py . [ 4%] +tests/test_annotators/test_lov_schema_annotator.py s [ 6%] +tests/test_annotators/test_schema_enricher.py . [ 9%] +tests/test_generalizers/test_csv_data_generalizer.py ..... [ 20%] +tests/test_generalizers/test_fk_inference.py .. [ 25%] +tests/test_generalizers/test_from_robot_template.py . [ 27%] +tests/test_generalizers/test_json_data_generalizer.py .... [ 36%] +tests/test_generalizers/test_pandas_data_generalizer.py . [ 38%] +tests/test_generalizers/test_rdf_data_generalizer.py . [ 40%] +tests/test_importers/test_cadsr_importer.py .. [ 45%] +tests/test_importers/test_convert_shacl_owl_representation.py . [ 47%] +tests/test_importers/test_dbml_importer.py .. [ 52%] +tests/test_importers/test_dosdp_importer.py . [ 54%] +tests/test_importers/test_frictionless_importer.py . [ 56%] +tests/test_importers/test_from_owl_schemaorg.py s [ 59%] +tests/test_importers/test_jsonschema_importer.py ..... [ 70%] +tests/test_importers/test_kwalify_importer.py ... [ 77%] +tests/test_importers/test_owl_importer.py .. [ 81%] +tests/test_importers/test_rdfs_importer.py ssFs [ 90%] +tests/test_importers/test_sql_importer.py . [ 93%] +tests/test_importers/test_tabular_importer.py . [ 95%] +tests/test_utils/test_instance_extractor.py .. [100%] + +=================================== FAILURES =================================== +______________________________ test_infer_prefix _______________________________ + + def test_infer_prefix(): + """ + If the schema has no name, id or default prefix, the importer should infer them from prefix usage in the schema. + """ + rdf = StringIO(""" + @prefix rdfs: . + @prefix foo: . + + foo:Class a rdfs:Class ; + rdfs:comment "A class." . + + foo:prop a rdfs:Property ; + rdfs:comment "A property." . + """) + engine = RdfsImportEngine() +> schema = engine.convert(rdf) + +tests/test_importers/test_rdfs_importer.py:67: +_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ +schema_automator/importers/rdfs_import_engine.py:111: in convert + g.parse(file, format=format) +.venv/lib/python3.9/site-packages/rdflib/graph.py:1468: in parse + source = create_input_source( +_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ + +source = RdfsImportEngine(metamodel=SchemaView(schema=SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None...e', 'minimum_cardinality', 'key', 'subproperty_of', 'exact_cardinality'}, seen_prefixes=set(), prefix_counts=Counter()) +publicID = None, location = None, file = None, data = None, format = 'turtle' + + def create_input_source( + source: Optional[ + Union[IO[bytes], TextIO, InputSource, str, bytes, pathlib.PurePath] + ] = None, + publicID: Optional[str] = None, # noqa: N803 + location: Optional[str] = None, + file: Optional[Union[BinaryIO, TextIO]] = None, + data: Optional[Union[str, bytes, dict]] = None, + format: Optional[str] = None, + ) -> InputSource: + """ + Return an appropriate InputSource instance for the given + parameters. + """ + + # test that exactly one of source, location, file, and data is not None. + non_empty_arguments = list( + filter( + lambda v: v is not None, + [source, location, file, data], + ) + ) + + if len(non_empty_arguments) != 1: + raise ValueError( + "exactly one of source, location, file or data must be given", + ) + + input_source = None + + if source is not None: + if TYPE_CHECKING: + assert file is None + assert data is None + assert location is None + if isinstance(source, InputSource): + input_source = source + else: + if isinstance(source, str): + location = source + elif isinstance(source, pathlib.PurePath): + location = str(source) + elif isinstance(source, bytes): + data = source + elif hasattr(source, "read") and not isinstance(source, Namespace): + f = source + input_source = InputSource() + if hasattr(source, "encoding"): + input_source.setCharacterStream(source) + input_source.setEncoding(source.encoding) + try: + b = source.buffer # type: ignore[union-attr] + input_source.setByteStream(b) + except (AttributeError, LookupError): + input_source.setByteStream(source) + else: + input_source.setByteStream(f) + if f is sys.stdin: + input_source.setSystemId("file:///dev/stdin") + elif hasattr(f, "name"): + input_source.setSystemId(f.name) + else: +> raise Exception( + "Unexpected type '%s' for source '%s'" % (type(source), source) + ) +E Exception: Unexpected type '' for source 'RdfsImportEngine(metamodel=SchemaView(schema=SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The metamodel for schemas defined using the Linked Data Modeling Language framework.\n\nFor more information on LinkML:\n\n* [linkml.io](https://linkml.io) main website\n* [specification](https://w3id.org/linkml/docs/specification/)\n\nLinkML is self-describing. Every LinkML schema consists of elements\nthat instantiate classes in this metamodel.\n\nCore metaclasses:\n\n* [SchemaDefinition](https://w3id.org/linkml/SchemaDefinition)\n* [ClassDefinition](https://w3id.org/linkml/ClassDefinition)\n* [SlotDefinition](https://w3id.org/linkml/SlotDefinition)\n* [TypeDefinition](https://w3id.org/linkml/TypeDefinition)\n\nThere are many subsets of *profiles* of the metamodel, for different purposes:\n\n* [MinimalSubset](https://w3id.org/linkml/MinimalSubset)\n* [BasicSubset](https://w3id.org/linkml/BasicSubset)\n\nFor canonical reference documentation on any metamodel construct,\nrefer to the official URI for each construct, e.g.\n[https://w3id.org/linkml/is_a](https://w3id.org/linkml/is_a)', alt_descriptions={}, title='LinkML Schema Metamodel', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/meta', version=None, imports=['linkml:types', 'linkml:mappings', 'linkml:extensions', 'linkml:annotations', 'linkml:units'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'skosxl': Prefix(prefix_prefix='skosxl', prefix_reference='http://www.w3.org/2008/05/skos-xl#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'NCIT': Prefix(prefix_prefix='NCIT', prefix_reference='http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#'), 'pav': Prefix(prefix_prefix='pav', prefix_reference='http://purl.org/pav/'), 'oslc': Prefix(prefix_prefix='oslc', prefix_reference='http://open-services.net/ns/core#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/'), 'bibo': Prefix(prefix_prefix='bibo', prefix_reference='http://purl.org/ontology/bibo/'), 'swrl': Prefix(prefix_prefix='swrl', prefix_reference='http://www.w3.org/2003/11/swrl#'), 'sh': Prefix(prefix_prefix='sh', prefix_reference='http://www.w3.org/ns/shacl#'), 'owl': Prefix(prefix_prefix='owl', prefix_reference='http://www.w3.org/2002/07/owl#'), 'qb': Prefix(prefix_prefix='qb', prefix_reference='http://purl.org/linked-data/cube#'), 'prov': Prefix(prefix_prefix='prov', prefix_reference='http://www.w3.org/ns/prov#'), 'vann': Prefix(prefix_prefix='vann', prefix_reference='https://vocab.org/vann/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/'), 'cdisc': Prefix(prefix_prefix='cdisc', prefix_reference='http://rdf.cdisc.org/mms#'), 'SIO': Prefix(prefix_prefix='SIO', prefix_reference='http://semanticscience.org/resource/SIO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'dcterms', 'OIO', 'owl', 'pav'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={'MinimalSubset': SubsetDefinition(name='MinimalSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The absolute minimal set of elements necessary for defining any schema.\n\nschemas conforming to the minimal subset consist of classes, with all slots\ninlined as attributes. There are no enums.', alt_descriptions={}, title='minimal subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[]), 'BasicSubset': SubsetDefinition(name='BasicSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An extension of MinimalSubset that avoids advanced constructs and can be implemented by a broad variety of tools.\n\nThis subset roughly corresponds to the union of most standard constructs used in relational datamodel modeling,\nobject oriented modeling, and simple JSON-style modeling, while avoiding more advanced constructs from these languages.\n\nIt is often possible to translate from a more expressive schema to a BasicSubset schema, through a schema derivation\nprocess', alt_descriptions={}, title='basic subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[]), 'SpecificationSubset': SubsetDefinition(name='SpecificationSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A subset that includes all the metamodel elements that form part of the normative LinkML specification.\n\nThe complete LinkML specification can be found at [linkml:specification](https://w3id.org/linkml/specification)', alt_descriptions={}, title='specification subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[]), 'RelationalModelProfile': SubsetDefinition(name='RelationalModelProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using the classic Relational Model.\nThe Relational Model excludes collections (multivalued slots) as first class entities. Instead, these must be\nmapped to backreferences\n\nThe classic Relational Model excludes inheritance and polymorphism -- these must be rolled down to\nconcrete classes or otherwise transformed.', alt_descriptions={}, title='relational model profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[]), 'ObjectOrientedProfile': SubsetDefinition(name='ObjectOrientedProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using a minimal\nimplementation of the object oriented metamodel as employed by languages such as Java and Python, or\nin modeling frameworks like UML', alt_descriptions={}, title='object oriented profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[]), 'OwlProfile': SubsetDefinition(name='OwlProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed in OWL', alt_descriptions={}, title='owl profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, types={}, enums={'pv_formula_options': EnumDefinition(name='pv_formula_options', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The formula used to generate the set of permissible values from the code_set values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'CODE': PermissibleValue(text='CODE', description='The permissible values are the set of possible codes in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'CURIE': PermissibleValue(text='CURIE', description='The permissible values are the set of CURIES in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'URI': PermissibleValue(text='URI', description='The permissible values are the set of code URIs in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'FHIR_CODING': PermissibleValue(text='FHIR_CODING', description='The permissible values are the set of FHIR coding elements derived from the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'LABEL': PermissibleValue(text='LABEL', description='The permissible values are the set of human readable labels in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'presence_enum': EnumDefinition(name='presence_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of conditions by which a slot value should be set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'UNCOMMITTED': PermissibleValue(text='UNCOMMITTED', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PRESENT': PermissibleValue(text='PRESENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'ABSENT': PermissibleValue(text='ABSENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'relational_role_enum': EnumDefinition(name='relational_role_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of roles a slot on a relationship class can play', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'SUBJECT': PermissibleValue(text='SUBJECT', description='a slot with this role connects a relationship to its subject/source node', meaning='rdf:subject', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedSource'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OBJECT': PermissibleValue(text='OBJECT', description='a slot with this role connects a relationship to its object/target node', meaning='rdf:object', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedTarget'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PREDICATE': PermissibleValue(text='PREDICATE', description='a slot with this role connects a relationship to its predicate/property', meaning='rdf:predicate', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedProperty'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NODE': PermissibleValue(text='NODE', description='a slot with this role connects a symmetric relationship to a node that represents either subject or object node', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OTHER_ROLE': PermissibleValue(text='OTHER_ROLE', description='a slot with this role connects a relationship to a node that is not subject/object/predicate', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'alias_predicate_enum': EnumDefinition(name='alias_predicate_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='permissible values for the relationship between an element and an alias', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'EXACT_SYNONYM': PermissibleValue(text='EXACT_SYNONYM', description=None, meaning='skos:exactMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RELATED_SYNONYM': PermissibleValue(text='RELATED_SYNONYM', description=None, meaning='skos:relatedMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'BROAD_SYNONYM': PermissibleValue(text='BROAD_SYNONYM', description=None, meaning='skos:broaderMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NARROW_SYNONYM': PermissibleValue(text='NARROW_SYNONYM', description=None, meaning='skos:narrowerMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'obligation_level_enum': EnumDefinition(name='obligation_level_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'REQUIRED': PermissibleValue(text='REQUIRED', description='The metadata element is required to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RECOMMENDED': PermissibleValue(text='RECOMMENDED', description='The metadata element is recommended to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ENCOURAGED'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OPTIONAL': PermissibleValue(text='OPTIONAL', description='The metadata element is optional to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'EXAMPLE': PermissibleValue(text='EXAMPLE', description='The metadata element is an example of how to use the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'DISCOURAGED': PermissibleValue(text='DISCOURAGED', description='The metadata element is allowed but discouraged to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}, slots={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_name', 'https://linkml.io/linkml/faq/modeling.html#why-are-my-class-names-translated-to-camelcase'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['short name', 'unique name'], structured_aliases={}, mappings=[], exact_mappings=['schema:name'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'title': SlotDefinition(name='title', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A concise human-readable display label for the element. The title should mirror the name, and should use ordinary textual punctuation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['long name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:title', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'conforms_to': SlotDefinition(name='conforms_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An established standard to which the element conforms.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:implements'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:conformsTo', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implements': SlotDefinition(name='implements', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element conforms to. The referenced element is not imported into the schema for the implementing element. However, the referenced schema may be used to check conformance of the implementing element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'instantiates': SlotDefinition(name='instantiates', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element instantiates.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Controlled terms used to categorize an element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if you wish to use uncontrolled terms or terms that lack identifiers then use the keywords element'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='category', domain=None, slot_uri='dcterms:subject', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'structured_alias'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'keywords': SlotDefinition(name='keywords', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Keywords or tags used to describe the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='keyword', domain='element', slot_uri='schema:keywords', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'definition_uri': SlotDefinition(name='definition_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The native URI of the element. This is always within the namespace of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Formed by combining the default_prefix with the normalized element name'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:class_uri', 'linkml:slot_uri'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='filled in by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes': SlotDefinition(name='id_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An allowed list of prefixes for which identifiers must conform. The identifier of this class or slot must begin with the URIs referenced by this prefix', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Order of elements may be used to indicate priority order', 'If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by `:` (_should_ start if the list is open)', 'If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix (_should_ start if the list is open)'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml-model/issues/28'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes_are_closed': SlotDefinition(name='id_prefixes_are_closed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true, then the id_prefixes slot is treated as being closed, and any use of an id that does not have this prefix is considered a violation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/194'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'description': SlotDefinition(name='description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="a textual description of the element's purpose and use", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['definition'], structured_aliases={}, mappings=[], exact_mappings=['dcterms:description', 'schema:description'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:definition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_aliases': SlotDefinition(name='structured_aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of structured_alias objects, used to provide aliases in conjunction with additional metadata.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:aliases'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skosxl:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='structured_alias', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aliases': SlotDefinition(name='aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Alternate names/labels for the element. These do not alter the semantics of the schema, but may be useful to support search and alignment.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['not be confused with the metaslot alias.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['synonyms', 'alternate names', 'alternative labels', 'designations'], structured_aliases={}, mappings=[], exact_mappings=['schema:alternateName'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated': SlotDefinition(name='deprecated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Description of why and when this element will no longer be used', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note that linkml does not use a boolean to indicate deprecation status - the presence of a string value in this field is sufficient to indicate deprecation.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:deprecated'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'todos': SlotDefinition(name='todos', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Outstanding issues that needs resolution', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'notes': SlotDefinition(name='notes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='editorial notes about an element intended primarily for internal consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:editorialNote', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'comments': SlotDefinition(name='comments', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='notes and comments about an element intended primarily for external consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['rdfs:comment'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:note', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_subset': SlotDefinition(name='in_subset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='used to indicate membership of a term in a defined subset of terms used for a particular domain or application.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of use in the translator_minimal subset in the biolink model, holding the minimal set of predicates used in a translator knowledge graph'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='OIO:inSubset', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'from_schema': SlotDefinition(name='from_schema', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='id of the schema that defined the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["A stronger model would be range schema_definition, but this doesn't address the import model"], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:inScheme', array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imported_from': SlotDefinition(name='imported_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the imports entry that this element was derived from. Empty means primary source', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'see_also': SlotDefinition(name='see_also', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of related entities or URLs that may be of relevance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:seeAlso', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owned_by': SlotDefinition(name='owned_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that owns or is the steward of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['steward', 'owner'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:isDefinedBy'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_by': SlotDefinition(name='created_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that created the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'contributors': SlotDefinition(name='contributors', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that contributed to the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:contributor', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_on': SlotDefinition(name='created_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was created', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'last_updated_on': SlotDefinition(name='last_updated_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was last updated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:lastUpdatedOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'modified_by': SlotDefinition(name='modified_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that modified the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='oslc:modifiedBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'status': SlotDefinition(name='status', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='status of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bibo:draft', description=None, object=None)], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://www.hl7.org/fhir/valueset-publication-status.html', 'https://www.hl7.org/fhir/versions.html#std-process'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['workflow status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='bibo:status', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'literal_form': SlotDefinition(name='literal_form', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The literal lexical form of a structured alias; i.e the actual alias value.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alias_name', 'string_value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='skosxl:literalForm', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_predicate': SlotDefinition(name='alias_predicate', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The relationship between an element and its alias.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='rdf:predicate', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='predicate', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alias_predicate_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_contexts': SlotDefinition(name='alias_contexts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The context in which an alias should be applied', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='contexts', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_language': SlotDefinition(name='in_language', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.rfc-editor.org/rfc/bcp/bcp47.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='the primary language used in the sources', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Recommended to use a string from IETF BCP 47'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='schema:inLanguage', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source': SlotDefinition(name='source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A related resource from which the element is derived.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The described resource may be derived from the related resource in whole or in part'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['origin', 'derived from'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['prov:wasDerivedFrom', 'schema:isBasedOn'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:source', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'publisher': SlotDefinition(name='publisher', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An entity responsible for making the resource available', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:publisher', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class or slot from which inheritable metaslots are propagated from. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abstract': SlotDefinition(name='abstract', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot cannot be directly instantiated and is intended for grouping purposes.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixin': SlotDefinition(name='mixin', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot is intended to be inherited from without being an is_a parent. mixins should not be inherited from using is_a, except by other mixins.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['trait'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent classes or slots from which inheritable metaslots are propagated from.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierarchy, while keeping the benefits of multiple inheritance'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['traits'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class.", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'values_from': SlotDefinition(name='values_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The identifier of a "value set" -- a set of identifiers that form the possible values for the range of a slot. Note: this is different than \'subproperty_of\' in that \'subproperty_of\' is intended to be a single ontology term while \'values_from\' is the identifier of an entire value set. Additionally, this is different than an enumeration in that in an enumeration, the values of the enumeration are listed directly in the model itself. Setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set': SlotDefinition(name='code_set', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the identifier of an enumeration code set.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_version': SlotDefinition(name='code_set_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version identifier of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['we assume that version identifiers lexically sort in temporal order. Recommend semver when possible'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_tag': SlotDefinition(name='code_set_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version tag of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['enum_expression cannot have both a code_set_tag and a code_set_version'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pv_formula': SlotDefinition(name='pv_formula', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Defines the specific formula to be used to generate the permissible values.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['you cannot have BOTH the permissible_values and permissible_value_formula tag', 'code_set must be supplied for this to be valid'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pv_formula_options', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'permissible_values': SlotDefinition(name='permissible_values', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of possible values for a slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['coded values'], structured_aliases={}, mappings=[], exact_mappings=['cdisc:PermissibleValue'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_uri': SlotDefinition(name='enum_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the enum that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include': SlotDefinition(name='include', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be included, after subtracting the minus set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minus': SlotDefinition(name='minus', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be subtracted from the enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherits': SlotDefinition(name='inherits', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum definition that is used as the basis to create a new enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['All permissible values for all inherited enums are copied to form the initial seed set'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'matches': SlotDefinition(name='matches', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a match query that is used to calculate the list of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='match_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier_pattern': SlotDefinition(name='identifier_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A regular expression that is used to obtain a set of identifiers from a source_ontology to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='match_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'concepts': SlotDefinition(name='concepts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of identifiers that are used to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reachable_from': SlotDefinition(name='reachable_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a query for obtaining a list of permissible values based on graph reachability', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='reachability_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_ontology': SlotDefinition(name='source_ontology', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An ontology or vocabulary or terminology that is used in a query to obtain a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['examples include schema.org, wikidata, or an OBO ontology', 'for obo ontologies we recommend CURIEs of the form obo:cl, obo:envo, etc'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['terminology', 'vocabulary'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_direct': SlotDefinition(name='is_direct', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the reachability query should only include directly related nodes, if False then include also transitively connected', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['non-transitive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse_up': SlotDefinition(name='traverse_up', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the direction of the reachability query is reversed and ancestors are retrieved', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestors'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include_self': SlotDefinition(name='include_self', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the query is reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reflexive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relationship_types': SlotDefinition(name='relationship_types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of relationship types (properties) that are used in a reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['predicates', 'properties'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_nodes': SlotDefinition(name='source_nodes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of nodes that are used in the reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'text': SlotDefinition(name='text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The actual permissible value itself', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['there are no constraints on the text of the permissible value, but for many applications you may want to consider following idiomatic forms and using computer-friendly forms'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:notation'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'meaning': SlotDefinition(name='meaning', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value meaning of a permissible value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['we may want to change the range of this (and other) elements in the model to an entitydescription type construct'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/ISO/IEC_11179'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV meaning'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id': SlotDefinition(name='id', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The official schema URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'emit_prefixes': SlotDefinition(name='emit_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'version': SlotDefinition(name='version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='particular version of schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:schemaVersion'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='pav:version', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imports': SlotDefinition(name='imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of schemas that are to be included in this schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_imports': SlotDefinition(name='structured_imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of specifications for how to import elements from external schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='import_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'license': SlotDefinition(name='license', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='license for the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='dcterms:license', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_curi_maps': SlotDefinition(name='default_curi_maps', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_prefix': SlotDefinition(name='default_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix that is used for all elements within a schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='default_ns', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_range': SlotDefinition(name='default_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='default slot range to be used if range element is omitted from a slot definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subsets': SlotDefinition(name='subsets', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all subset definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['OIO:hasSubset'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'types': SlotDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all type definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enums': SlotDefinition(name='enums', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all enum definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_definitions': SlotDefinition(name='slot_definitions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all slot definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note the formal name of this element is slot_definitions, but it has alias slots, which is the canonical form used in yaml/json serializes of schemas.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='slots', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classes': SlotDefinition(name='classes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all class definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'metamodel_version': SlotDefinition(name='metamodel_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Version of the metamodel used to load the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file': SlotDefinition(name='source_file', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name, uri or description of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_date': SlotDefinition(name='source_file_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='modification date of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_size': SlotDefinition(name='source_file_size', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='size in bytes of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'generation_date': SlotDefinition(name='generation_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='date and time that the schema was loaded/generated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slots': SlotDefinition(name='slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='collection of slot names that are applicable to a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the list of applicable slots is inherited from parent classes', 'This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_usage': SlotDefinition(name='slot_usage', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the refinement of a slot in the context of the containing class definition.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_range': SlotDefinition(name='enum_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An inlined enumeration', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range_expression': SlotDefinition(name='range_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A range that is described as a boolean expression combining existing ranges', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['one use for this is being able to describe a range using any_of expressions, for example to combine two enums'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['path_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean_slot': SlotDefinition(name='boolean_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A grouping of slots that expression a boolean operator over a list of operands', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if at least one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:or'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=101, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if only one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:xone'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=103, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if none of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:not'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=105, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if all of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:and'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=107, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'preconditions': SlotDefinition(name='preconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold in order for the rule to be applicable to an instance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if', 'body', 'antecedents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=111, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:condition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'postconditions': SlotDefinition(name='postconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['then', 'head', 'consequents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=113, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elseconditions': SlotDefinition(name='elseconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions no not hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['else'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=115, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bidirectional': SlotDefinition(name='bidirectional', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in addition to preconditions entailing postconditions, the postconditions entail the preconditions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['iff', 'if and only if'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'open_world': SlotDefinition(name='open_world', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rank': SlotDefinition(name='rank', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the relative order in which the element occurs, lower values are given precedence', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the rank of an element does not affect the semantics'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['order', 'precedence', 'display order'], structured_aliases={}, mappings=[], exact_mappings=['qudt:order', 'qb:order'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:order', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'class_rule'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deactivated': SlotDefinition(name='deactivated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a deactivated rule is not executed by the rules engine', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:deactivated', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the collection of rules that apply to all members of this class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri='sh:rule', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classification_rules': SlotDefinition(name='classification_rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The collection of classification rules that apply to all members of this class. Classification rules allow for automatically assigning the instantiated type of an instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_conditions': SlotDefinition(name='slot_conditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='expresses constraints on a group of slots for a class expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'attributes': SlotDefinition(name='attributes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Inline definition of slots', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'class_uri': SlotDefinition(name='class_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning class_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subclass_of': SlotDefinition(name='subclass_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='DEPRECATED -- rdfs:subClassOf to be emitted in OWL generation', alt_descriptions={}, title=None, deprecated='Use is_a instead', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:subClassOf'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'defining_slots': SlotDefinition(name='defining_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that the domain element consists exactly of the members of the element in the range.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['this only applies in the OWL generation'], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tree_root': SlotDefinition(name='tree_root', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates that this is the Container class which forms the root of the serialized document structure in tree serializations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['each schema should have at most one tree root'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/intro/tutorial02.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_keys': SlotDefinition(name='unique_keys', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of named unique keys for this class. Unique keys may be singular or compound.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#unique-key'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:hasKey'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='unique_key', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_name': SlotDefinition(name='unique_key_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unique key', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'consider_nulls_inequal': SlotDefinition(name='consider_nulls_inequal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='By default, None values are considered equal for the purposes of comparisons in determining uniqueness. Set this to true to treat missing values as per ANSI-SQL NULLs, i.e NULL=NULL is always False.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_slots': SlotDefinition(name='unique_key_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='list of slot names that form a key. The tuple formed from the values of all these slots should be unique.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_names_unique': SlotDefinition(name='slot_names_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then induced/mangled slot names are not created for class_usage and attributes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain': SlotDefinition(name='domain', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the subject of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts that X is an instance of C1\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the object of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts Y is an instance of C2\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['range is underspecified, as not all elements can appear as the range of a slot.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value domain'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent='default_range', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['enum_binding', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_uri': SlotDefinition(name='slot_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the slot in a linked data context. The URI may come from any namespace and may be shared between schemas.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning slot_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='slot_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'multivalued': SlotDefinition(name='multivalued', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that slot can have more than one value and should be represented using a list or collection structure.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'array': SlotDefinition(name='array', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='coerces the value of the slot into an array and defines the dimensions of that array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='array_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dimensions': SlotDefinition(name='dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='definitions of each axis in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['axes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=True, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='dimension_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_number_dimensions': SlotDefinition(name='minimum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='minimum number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_number_dimensions': SlotDefinition(name='maximum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='maximum number of dimensions in the array, or False if explicitly no maximum. If this is unset, and an explicit list of dimensions are passed using dimensions, then this is interpreted as a closed list and the maximum_number_dimensions is the length of the dimensions list, unless this value is set to False', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_number_dimensions cannot be less than minimum_number_dimensions'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])], all_of=[]), 'exact_number_dimensions': SlotDefinition(name='exact_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='exact number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_number_dimensions is set, then minimum_number_dimensions and maximum_number_dimensions must be unset or have the same value'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherited': SlotDefinition(name='inherited', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the *value* of a slot is inherited by subclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only', 'Inherited applies to slot values. Parent *slots* are always inherited by subclasses'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'readonly': SlotDefinition(name='readonly', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If present, slot is read only. Text explains why', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ifabsent': SlotDefinition(name='ifabsent', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='function that provides a default value for the slot.\n * [Tt]rue -- boolean True\n * [Ff]alse -- boolean False\n * bnode -- blank node identifier\n * class_curie -- CURIE for the containing class\n * class_uri -- URI for the containing class\n * default_ns -- schema default namespace\n * default_range -- schema default range\n * int(value) -- integer value\n * slot_uri -- URI for the slot\n * slot_curie -- CURIE for the slot\n * string(value) -- string value\n * EnumName(PermissibleValue) -- enum value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:equals_expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:defaultValue'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implicit_prefix': SlotDefinition(name='implicit_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Causes the slot value to be interpreted as a uriorcurie after prefixing with this string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_specification_constant': SlotDefinition(name='value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain the a slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_value_specification_constant': SlotDefinition(name='list_value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_presence': SlotDefinition(name='value_presence', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if PRESENT then a value must be present (for lists there must be at least one value). If ABSENT then a value must be absent (for lists, must be empty)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='presence_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string': SlotDefinition(name='equals_string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number': SlotDefinition(name='equals_number', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range of a number and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_expression': SlotDefinition(name='equals_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot must equal the value of the evaluated expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["for example, a 'length' slot may have an equals_expression with value '(end-start)+1'"], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/developers/inference.html', 'https://linkml.io/linkml/schemas/advanced.html#equals-expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact_cardinality': SlotDefinition(name='exact_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the exact number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_cardinality is set, then minimum_cardinalty and maximum_cardinality must be unset or have the same value'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_cardinality': SlotDefinition(name='minimum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the minimum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_cardinality': SlotDefinition(name='maximum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the maximum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_cardinality cannot be less than minimum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string_in': SlotDefinition(name='equals_string_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number_in': SlotDefinition(name='equals_number_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range number and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_member': SlotDefinition(name='has_member', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with at least one member satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_members': SlotDefinition(name='all_members', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with all members satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'singular_name': SlotDefinition(name='singular_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name that is used in the singular form', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this may be used in some schema translations where use of a singular form is idiomatic, for example RDF'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:altLabel'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'required': SlotDefinition(name='required', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot must be present in instances of the class definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'recommended': SlotDefinition(name='recommended', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot should be present in instances of the class definition, but this is not required', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['This is to be used where not all data is expected to conform to having a required field', 'If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/177'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inapplicable': SlotDefinition(name='inapplicable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that values for this slot must not be present', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['By default all slots are applicable. The main use case for this slot is as an override in a subclass'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined': SlotDefinition(name='inlined', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['classes without keys or identifiers are necessarily inlined as lists', 'only applicable in tree-like serializations, e.g json, yaml'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_list': SlotDefinition(name='inlined_as_list', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The default loader will accept either list or dictionary form as input. This parameter controls internal\nrepresentation and output.', 'A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key\nis the key or identifier and whose value is the one additional element. This form is still stored according\nto the inlined_as_list setting.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_simple_dict': SlotDefinition(name='inlined_as_simple_dict', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a simple dict whose values are all atoms', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=28, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_ordered': SlotDefinition(name='list_elements_ordered', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the order of elements of a multivalued slot is guaranteed to be preserved. If False, the order may still be preserved but this is not guaranteed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_unique': SlotDefinition(name='list_elements_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then there must be no duplicates in the elements of a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shared': SlotDefinition(name='shared', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the relationship between the slot domain and range is many to one or many to many', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inverse functional', 'many to one or many'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'key': SlotDefinition(name='key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identify the elements within a single container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['key is inherited', 'a given domain can have at most one key slot (restriction to be removed in the future)', 'identifiers and keys are mutually exclusive. A given domain cannot have both', 'a key slot is automatically required. Keys cannot be optional'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier': SlotDefinition(name='identifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identifies the elements. There can be at most one identifier or key per container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['identifier is inherited', 'a key slot is automatically required. Identifiers cannot be optional', 'a given domain can have at most one identifier', 'identifiers and keys are mutually exclusive. A given domain cannot have both'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Identifier', 'linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary key', 'ID', 'UID', 'code'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'designates_type': SlotDefinition(name='designates_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/type-designators.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['type designator'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias': SlotDefinition(name='alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of alias is used within this metamodel, slot_definitions is aliases as slots', 'not to be confused with aliases, which indicates a set of terms to be used for search purposes.'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='skos:prefLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owner': SlotDefinition(name='owner', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the "owner" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot', alt_descriptions={}, title=None, deprecated='Will be replaced by domain_of and eventually removed', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by loader -- either class domain or slot domain', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain_of': SlotDefinition(name='domain_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the class(es) that reference the slot in a "slots" or "slot_usage" context', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:domainIncludes', 'SIO:000011'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_usage_slot': SlotDefinition(name='is_usage_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that this slot was defined in a slot_usage situation', alt_descriptions={}, title=None, deprecated='Replaced by usage_slot_name', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'usage_slot_name': SlotDefinition(name='usage_slot_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of the slot referenced in the slot_usage', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subproperty_of': SlotDefinition(name='subproperty_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Ontology property which this slot is a subproperty of. Note: setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='RO:HOM0000001', description='this is the RO term for "in homology relationship with", and used as a value of subproperty of this means that any ontological child (related to RO:HOM0000001 via an is_a relationship), is a valid value for the slot that declares this with the subproperty_of tag. This differs from the \'values_from\' meta model component in that \'values_from\' requires the id of a value set (said another way, if an entire ontology had a curie/identifier that was the identifier for the entire ontology, then that identifier would be used in \'values_from.\')', object=None)], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='rdfs:subPropertyOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'children_are_mutually_disjoint': SlotDefinition(name='children_are_mutually_disjoint', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true then all direct is_a children are mutually disjoint and share no instances in common', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_logical_characteristic': SlotDefinition(name='relational_logical_characteristic', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract grouping for metaslots that describe logical properties of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symmetric': SlotDefinition(name='symmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is symmetric, and i.s=v, then v.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:SymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asymmetric': SlotDefinition(name='asymmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['asymmetry is the combination of antisymmetry and irreflexivity'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:AsymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive': SlotDefinition(name='reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is reflexive, then i.s=i for all instances i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:ReflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'irreflexive': SlotDefinition(name='irreflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is irreflexive, then there exists no i such i.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:IrreflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'locally_reflexive': SlotDefinition(name='locally_reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is locally_reflexive, then i.s=i for all instances i where s is a class slot for the type of i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive': SlotDefinition(name='transitive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is transitive, and i.s=z, and s.s=j, then i.s=j', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:TransitiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive_form_of': SlotDefinition(name='transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Example: ancestor_of is the transitive_form_of parent_of'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive_transitive_form_of': SlotDefinition(name='reflexive_transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='transitive_form_of including the reflexive case', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='transitive_form_of', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inverse': SlotDefinition(name='inverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="indicates that any instance of d s r implies that there is also an instance of r s' d", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='owl:inverseOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_class_field': SlotDefinition(name='is_class_field', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that for any instance, i, the domain of this slot will include an assertion of i s range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'role': SlotDefinition(name='role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a textual descriptor that indicates the role played by the slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the primary use case for this slot is to provide a textual descriptor of a generic slot name when used in the context of a more specific class'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_value': SlotDefinition(name='minimum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or higher than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['low value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_value': SlotDefinition(name='maximum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or lower than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['high value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'interpolated': SlotDefinition(name='interpolated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then the pattern is first string interpolated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'partial_match': SlotDefinition(name='partial_match', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if not true then the pattern must match the whole string, as if enclosed in ^...$', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pattern': SlotDefinition(name='pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'syntax': SlotDefinition(name='syntax', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string. May be interpolated.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_pattern': SlotDefinition(name='structured_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to the regular expression in the pattern expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#structured-patterns'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pattern_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'string_serialization': SlotDefinition(name='string_serialization', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots.\nWe call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion.\nImplementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects\nFor example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/issues/128'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'type_mapping'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bindings': SlotDefinition(name='bindings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of enum bindings that specify how a slot can be bound to a permissible value from an enumeration.\nLinkML provides enums to allow string values to be restricted to one of a set of permissible values (specified statically or dynamically).\nEnum bindings allow enums to be bound to any object, including complex nested objects. For example, given a (generic) class Concept with slots id and label, it may be desirable to restrict the values the id takes on in a given context. For example, a HumanSample class may have a slot for representing sample site, with a range of concept, but the values of that slot may be restricted to concepts from a particular branch of an anatomy ontology.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_binding', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'binds_value_of': SlotDefinition(name='binds_value_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A path to a slot that is being bound to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_binding', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'obligation_level': SlotDefinition(name='obligation_level', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='obligation_level_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_mappings': SlotDefinition(name='type_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="A collection of type mappings that specify how a slot's range should be mapped or serialized in different frameworks", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_mapping', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'framework_key': SlotDefinition(name='framework_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of a format that can be used to serialize LinkML data. The string value should be a code from the LinkML frameworks vocabulary, but this is not strictly enforced', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='framework', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mapped_type': SlotDefinition(name='mapped_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='type to coerce to', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='type', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'typeof': SlotDefinition(name='typeof', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A parent type from which type properties are inherited', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the target type definition of the typeof slot is referred to as the "parent type"', 'the type definition containing the typeof slot is referred to as the "child type"', 'type definitions without a typeof slot are referred to as a "root type"'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'base': SlotDefinition(name='base', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='python base type in the LinkML runtime that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['every root type must have a base', 'the base is inherited by child types but may be overridden. Base compatibility is not checked.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_uri': SlotDefinition(name='type_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The uri that defines the possible values for the type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps)", 'every root type must have a type uri'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='uri', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'repr': SlotDefinition(name='repr', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name of the python object that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_text': SlotDefinition(name='alt_description_text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='text of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_source': SlotDefinition(name='alt_description_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the source of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='source', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_descriptions': SlotDefinition(name='alt_descriptions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A sourced alternative description for an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alternate definitions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alt_description', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value': SlotDefinition(name='value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri='skos:example', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_description': SlotDefinition(name='value_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='description of what the value is doing', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_object': SlotDefinition(name='value_object', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='direct object representation of the example', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='object', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'examples': SlotDefinition(name='examples', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example usages of an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['vann:example'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='example', domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='example', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_prefix': SlotDefinition(name='prefix_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix components of a prefix expansions. This is the part that appears before the colon in a CURIE.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:prefix', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_reference': SlotDefinition(name='prefix_reference', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The namespace to which a prefix expands to.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:namespace', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefixes': SlotDefinition(name='prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of prefix expansions that specify how CURIEs can be expanded to URIs', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='sh:declare', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='prefix', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_key': SlotDefinition(name='setting_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the variable name for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_value': SlotDefinition(name='setting_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The value assigned for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'settings': SlotDefinition(name='settings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of global variable settings', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['global variables are used in string interpolation in structured patterns'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['constants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_from': SlotDefinition(name='import_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_as': SlotDefinition(name='import_as', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_map': SlotDefinition(name='import_map', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_source': SlotDefinition(name='local_name_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the ncname of the source of the name', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_value': SlotDefinition(name='local_name_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name assigned to an element in a given ontology', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_names': SlotDefinition(name='local_names', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='local_name', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_group': SlotDefinition(name='slot_group', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='allows for grouping of related slots into a grouping slot that serves the role of a group', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['slot groups do not change the semantics of a model but are a useful way of visually grouping related slots'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='sh:group', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression='True', exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this slot is a grouping slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:PropertyGroup'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in a sequential list, this indicates the next member', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reversed': SlotDefinition(name='reversed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if the slot is to be inversed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse': SlotDefinition(name='traverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot to traverse', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'path_rule': SlotDefinition(name='path_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'represents_relationship': SlotDefinition(name='represents_relationship', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this class represents a relationship rather than an entity', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond', 'in the context of RDF, this should be used when instances of the class are `rdf:Statement`s', 'in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['rdf:Statement', 'https://patterns.dataincubator.org/book/qualified-relation.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['is_reified'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_role': SlotDefinition(name='relational_role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the role a slot on a relationship class plays, for example, the subject, object or predicate roles', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this should only be used on slots that are applicable to class that represent relationships', 'in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary', 'in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reification_role'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='relational_role_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'Anything': ClassDefinition(name='Anything', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri='linkml:Any', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'common_metadata': ClassDefinition(name='common_metadata', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Generic metadata shared across definitions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['description', 'alt_descriptions', 'title', 'deprecated', 'todos', 'notes', 'comments', 'examples', 'in_subset', 'from_schema', 'imported_from', 'source', 'in_language', 'see_also', 'deprecated element has exact replacement', 'deprecated element has possible replacement', 'aliases', 'structured_aliases', 'mappings', 'exact mappings', 'close mappings', 'related mappings', 'narrow mappings', 'broad mappings', 'created_by', 'contributors', 'created_on', 'last_updated_on', 'modified_by', 'status', 'rank', 'categories', 'keywords'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'element': ClassDefinition(name='element', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A named element in the model', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data element', 'object'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['name', 'id_prefixes', 'id_prefixes_are_closed', 'definition_uri', 'local_names', 'conforms_to', 'implements', 'instantiates'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'schema_definition': ClassDefinition(name='schema_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of definitions that make up a schema or a data model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_dictionary'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data dictionary', 'data model', 'information model', 'logical model', 'schema', 'model'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['qb:ComponentSet', 'owl:Ontology'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'version', 'imports', 'license', 'prefixes', 'emit_prefixes', 'default_curi_maps', 'default_prefix', 'default_range', 'subsets', 'types', 'enums', 'slot_definitions', 'classes', 'metamodel_version', 'source_file', 'source_file_date', 'source_file_size', 'generation_date', 'slot_names_unique', 'settings', 'bindings'], slot_usage={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a unique name for the schema that is both human-readable and consists of only characters from the NCName set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=True, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_expression': ClassDefinition(name='type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract class grouping named types and anonymous type expressions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'equals_string', 'equals_string_in', 'equals_number', 'minimum_value', 'maximum_value', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_type_expression': ClassDefinition(name='anonymous_type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A type expression that is not a top-level named type definition. Used for nesting.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_definition': ClassDefinition(name='type_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that whose instances are atomic scalar values that can be mapped to primitive types', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['typeof', 'base', 'type_uri', 'repr', 'union_of'], slot_usage={'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'subset_definition': ClassDefinition(name='subset_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that can be used to group other metamodel elements', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'definition': ClassDefinition(name='definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='abstract base class for core metaclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_definition'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='element', abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['is_a', 'abstract', 'mixin', 'mixins', 'apply_to', 'values_from', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_expression': ClassDefinition(name='enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that constrains the range of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['code_set', 'code_set_tag', 'code_set_version', 'pv_formula', 'permissible_values', 'include', 'minus', 'inherits', 'reachable_from', 'matches', 'concepts'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_enum_expression': ClassDefinition(name='anonymous_enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum_expression that is not named', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_definition': ClassDefinition(name='enum_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances must be drawn from a specified set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['enum', 'enumeration', 'semantic enumeration', 'value set', 'term set', 'concept set', 'code set', 'Terminology Value Set', 'answer list', 'value domain'], structured_aliases={}, mappings=[], exact_mappings=['qb:HierarchicalCodeList', 'NCIT:C113497', 'cdisc:ValueDomain'], close_mappings=['skos:ConceptScheme'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['enum_uri'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_binding': ClassDefinition(name='enum_binding', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binding of a slot or a class to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'obligation_level', 'binds_value_of', 'pv_formula'], slot_usage={'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'match_query': ClassDefinition(name='match_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissivle values via a query that matches on properties of the external concepts.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['identifier_pattern', 'source_ontology'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'reachability_query': ClassDefinition(name='reachability_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissible values via walking from a set of source nodes to a set of descendants or ancestors over a set of relationship types.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['source_ontology', 'source_nodes', 'relationship_types', 'is_direct', 'include_self', 'traverse_up'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'structured_alias': ClassDefinition(name='structured_alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='object that contains meta data about a synonym or alias including where it came from (source) and its scope (narrow, broad, etc.)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['literal_form', 'alias_predicate', 'categories', 'alias_contexts'], slot_usage={'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The category or categories of an alias. This can be drawn from any relevant vocabulary', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://w3id.org/mod#acronym', description='An acronym', object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='skosxl:Label', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'expression': ClassDefinition(name='expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='general mixin for any class that can represent some form of expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_expression': ClassDefinition(name='anonymous_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract parent class for any nested expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['anonymous expressions are useful for when it is necessary to build a complex expression without introducing a named element for each sub-expression'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'path_expression': ClassDefinition(name='path_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that describes an abstract path from an object to another through a sequence of slot lookups', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['followed_by', 'none_of', 'any_of', 'all_of', 'exactly_one_of', 'reversed', 'traverse', 'range_expression'], slot_usage={'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_expression': ClassDefinition(name='slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that constrains the range of values a slot can take', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'range_expression', 'enum_range', 'bindings', 'required', 'recommended', 'multivalued', 'inlined', 'inlined_as_list', 'minimum_value', 'maximum_value', 'pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'value_presence', 'equals_string', 'equals_string_in', 'equals_number', 'equals_expression', 'exact_cardinality', 'minimum_cardinality', 'maximum_cardinality', 'has_member', 'all_members', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_slot_expression': ClassDefinition(name='anonymous_slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_definition': ClassDefinition(name='slot_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that describes how instances are related to other instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['slot', 'field', 'property', 'attribute', 'column', 'variable'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdf:Property', 'qb:ComponentProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['singular_name', 'domain', 'slot_uri', 'array', 'inherited', 'readonly', 'ifabsent', 'list_elements_unique', 'list_elements_ordered', 'shared', 'key', 'identifier', 'designates_type', 'alias', 'owner', 'domain_of', 'subproperty_of', 'symmetric', 'reflexive', 'locally_reflexive', 'irreflexive', 'asymmetric', 'transitive', 'inverse', 'is_class_field', 'transitive_form_of', 'reflexive_transitive_form_of', 'role', 'is_usage_slot', 'usage_slot_name', 'relational_role', 'slot_group', 'is_grouping_slot', 'path_rule', 'disjoint_with', 'children_are_mutually_disjoint', 'union_of', 'type_mappings'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent slot from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin slots from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_expression': ClassDefinition(name='class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A boolean expression that can be used to dynamically determine membership of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['any_of', 'exactly_one_of', 'none_of', 'all_of', 'slot_conditions'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_class_expression': ClassDefinition(name='anonymous_class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['is_a'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_definition': ClassDefinition(name='class_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances are complex objects that may have slot-value assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['table', 'record', 'template', 'message', 'observation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:Class'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['slots', 'slot_usage', 'attributes', 'class_uri', 'subclass_of', 'union_of', 'defining_slots', 'tree_root', 'unique_keys', 'rules', 'classification_rules', 'slot_names_unique', 'represents_relationship', 'disjoint_with', 'children_are_mutually_disjoint'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin classes from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_level_rule': ClassDefinition(name='class_level_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that is applied to classes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_rule': ClassDefinition(name='class_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that applies to instances of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if rule'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:TripleRule', 'swrl:Imp'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='class_level_rule', abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['preconditions', 'postconditions', 'elseconditions', 'bidirectional', 'open_world', 'rank', 'deactivated'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'array_expression': ClassDefinition(name='array_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['exact_number_dimensions', 'minimum_number_dimensions', 'maximum_number_dimensions', 'dimensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'dimension_expression': ClassDefinition(name='dimension_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines one of the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['alias', 'maximum_cardinality', 'minimum_cardinality', 'exact_cardinality'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'pattern_expression': ClassDefinition(name='pattern_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a regular expression pattern used to evaluate conformance of a string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['syntax', 'interpolated', 'partial_match'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'import_expression': ClassDefinition(name='import_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression describing an import', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['import_from', 'import_as', 'import_map'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'setting': ClassDefinition(name='setting', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='assignment of a key to a value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['setting_key', 'setting_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'prefix': ClassDefinition(name='prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='prefix URI tuple', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['prefix_prefix', 'prefix_reference'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'local_name': ClassDefinition(name='local_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed label', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['local_name_source', 'local_name_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'example': ClassDefinition(name='example', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='usage example and description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['value', 'value_description', 'value_object'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'alt_description': ClassDefinition(name='alt_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['structured description'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['alt_description_source', 'alt_description_text'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'permissible_value': ClassDefinition(name='permissible_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a permissible value, accompanied by intended text and an optional mapping to a concept URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:Concept'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['text', 'description', 'meaning', 'unit', 'instantiates', 'implements', 'is_a', 'mixins'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'unique_key': ClassDefinition(name='unique_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of slots whose values uniquely identify an instance of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['unique_key_name', 'unique_key_slots', 'consider_nulls_inequal'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_mapping': ClassDefinition(name='type_mapping', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Represents how a slot or type can be serialized to a format.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['framework_key', 'mapped_type', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file=None, source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), schema_map={'meta': SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The metamodel for schemas defined using the Linked Data Modeling Language framework.\n\nFor more information on LinkML:\n\n* [linkml.io](https://linkml.io) main website\n* [specification](https://w3id.org/linkml/docs/specification/)\n\nLinkML is self-describing. Every LinkML schema consists of elements\nthat instantiate classes in this metamodel.\n\nCore metaclasses:\n\n* [SchemaDefinition](https://w3id.org/linkml/SchemaDefinition)\n* [ClassDefinition](https://w3id.org/linkml/ClassDefinition)\n* [SlotDefinition](https://w3id.org/linkml/SlotDefinition)\n* [TypeDefinition](https://w3id.org/linkml/TypeDefinition)\n\nThere are many subsets of *profiles* of the metamodel, for different purposes:\n\n* [MinimalSubset](https://w3id.org/linkml/MinimalSubset)\n* [BasicSubset](https://w3id.org/linkml/BasicSubset)\n\nFor canonical reference documentation on any metamodel construct,\nrefer to the official URI for each construct, e.g.\n[https://w3id.org/linkml/is_a](https://w3id.org/linkml/is_a)', alt_descriptions={}, title='LinkML Schema Metamodel', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/meta', version=None, imports=['linkml:types', 'linkml:mappings', 'linkml:extensions', 'linkml:annotations', 'linkml:units'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'skosxl': Prefix(prefix_prefix='skosxl', prefix_reference='http://www.w3.org/2008/05/skos-xl#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'NCIT': Prefix(prefix_prefix='NCIT', prefix_reference='http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#'), 'pav': Prefix(prefix_prefix='pav', prefix_reference='http://purl.org/pav/'), 'oslc': Prefix(prefix_prefix='oslc', prefix_reference='http://open-services.net/ns/core#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/'), 'bibo': Prefix(prefix_prefix='bibo', prefix_reference='http://purl.org/ontology/bibo/'), 'swrl': Prefix(prefix_prefix='swrl', prefix_reference='http://www.w3.org/2003/11/swrl#'), 'sh': Prefix(prefix_prefix='sh', prefix_reference='http://www.w3.org/ns/shacl#'), 'owl': Prefix(prefix_prefix='owl', prefix_reference='http://www.w3.org/2002/07/owl#'), 'qb': Prefix(prefix_prefix='qb', prefix_reference='http://purl.org/linked-data/cube#'), 'prov': Prefix(prefix_prefix='prov', prefix_reference='http://www.w3.org/ns/prov#'), 'vann': Prefix(prefix_prefix='vann', prefix_reference='https://vocab.org/vann/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/'), 'cdisc': Prefix(prefix_prefix='cdisc', prefix_reference='http://rdf.cdisc.org/mms#'), 'SIO': Prefix(prefix_prefix='SIO', prefix_reference='http://semanticscience.org/resource/SIO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'dcterms', 'OIO', 'owl', 'pav'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={'MinimalSubset': SubsetDefinition(name='MinimalSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The absolute minimal set of elements necessary for defining any schema.\n\nschemas conforming to the minimal subset consist of classes, with all slots\ninlined as attributes. There are no enums.', alt_descriptions={}, title='minimal subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[]), 'BasicSubset': SubsetDefinition(name='BasicSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An extension of MinimalSubset that avoids advanced constructs and can be implemented by a broad variety of tools.\n\nThis subset roughly corresponds to the union of most standard constructs used in relational datamodel modeling,\nobject oriented modeling, and simple JSON-style modeling, while avoiding more advanced constructs from these languages.\n\nIt is often possible to translate from a more expressive schema to a BasicSubset schema, through a schema derivation\nprocess', alt_descriptions={}, title='basic subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[]), 'SpecificationSubset': SubsetDefinition(name='SpecificationSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A subset that includes all the metamodel elements that form part of the normative LinkML specification.\n\nThe complete LinkML specification can be found at [linkml:specification](https://w3id.org/linkml/specification)', alt_descriptions={}, title='specification subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[]), 'RelationalModelProfile': SubsetDefinition(name='RelationalModelProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using the classic Relational Model.\nThe Relational Model excludes collections (multivalued slots) as first class entities. Instead, these must be\nmapped to backreferences\n\nThe classic Relational Model excludes inheritance and polymorphism -- these must be rolled down to\nconcrete classes or otherwise transformed.', alt_descriptions={}, title='relational model profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[]), 'ObjectOrientedProfile': SubsetDefinition(name='ObjectOrientedProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using a minimal\nimplementation of the object oriented metamodel as employed by languages such as Java and Python, or\nin modeling frameworks like UML', alt_descriptions={}, title='object oriented profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[]), 'OwlProfile': SubsetDefinition(name='OwlProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed in OWL', alt_descriptions={}, title='owl profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, types={}, enums={'pv_formula_options': EnumDefinition(name='pv_formula_options', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The formula used to generate the set of permissible values from the code_set values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'CODE': PermissibleValue(text='CODE', description='The permissible values are the set of possible codes in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'CURIE': PermissibleValue(text='CURIE', description='The permissible values are the set of CURIES in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'URI': PermissibleValue(text='URI', description='The permissible values are the set of code URIs in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'FHIR_CODING': PermissibleValue(text='FHIR_CODING', description='The permissible values are the set of FHIR coding elements derived from the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'LABEL': PermissibleValue(text='LABEL', description='The permissible values are the set of human readable labels in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'presence_enum': EnumDefinition(name='presence_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of conditions by which a slot value should be set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'UNCOMMITTED': PermissibleValue(text='UNCOMMITTED', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PRESENT': PermissibleValue(text='PRESENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'ABSENT': PermissibleValue(text='ABSENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'relational_role_enum': EnumDefinition(name='relational_role_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of roles a slot on a relationship class can play', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'SUBJECT': PermissibleValue(text='SUBJECT', description='a slot with this role connects a relationship to its subject/source node', meaning='rdf:subject', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedSource'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OBJECT': PermissibleValue(text='OBJECT', description='a slot with this role connects a relationship to its object/target node', meaning='rdf:object', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedTarget'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PREDICATE': PermissibleValue(text='PREDICATE', description='a slot with this role connects a relationship to its predicate/property', meaning='rdf:predicate', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedProperty'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NODE': PermissibleValue(text='NODE', description='a slot with this role connects a symmetric relationship to a node that represents either subject or object node', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OTHER_ROLE': PermissibleValue(text='OTHER_ROLE', description='a slot with this role connects a relationship to a node that is not subject/object/predicate', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'alias_predicate_enum': EnumDefinition(name='alias_predicate_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='permissible values for the relationship between an element and an alias', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'EXACT_SYNONYM': PermissibleValue(text='EXACT_SYNONYM', description=None, meaning='skos:exactMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RELATED_SYNONYM': PermissibleValue(text='RELATED_SYNONYM', description=None, meaning='skos:relatedMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'BROAD_SYNONYM': PermissibleValue(text='BROAD_SYNONYM', description=None, meaning='skos:broaderMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NARROW_SYNONYM': PermissibleValue(text='NARROW_SYNONYM', description=None, meaning='skos:narrowerMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'obligation_level_enum': EnumDefinition(name='obligation_level_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'REQUIRED': PermissibleValue(text='REQUIRED', description='The metadata element is required to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RECOMMENDED': PermissibleValue(text='RECOMMENDED', description='The metadata element is recommended to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ENCOURAGED'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OPTIONAL': PermissibleValue(text='OPTIONAL', description='The metadata element is optional to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'EXAMPLE': PermissibleValue(text='EXAMPLE', description='The metadata element is an example of how to use the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'DISCOURAGED': PermissibleValue(text='DISCOURAGED', description='The metadata element is allowed but discouraged to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}, slots={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_name', 'https://linkml.io/linkml/faq/modeling.html#why-are-my-class-names-translated-to-camelcase'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['short name', 'unique name'], structured_aliases={}, mappings=[], exact_mappings=['schema:name'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'title': SlotDefinition(name='title', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A concise human-readable display label for the element. The title should mirror the name, and should use ordinary textual punctuation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['long name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:title', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'conforms_to': SlotDefinition(name='conforms_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An established standard to which the element conforms.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:implements'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:conformsTo', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implements': SlotDefinition(name='implements', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element conforms to. The referenced element is not imported into the schema for the implementing element. However, the referenced schema may be used to check conformance of the implementing element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'instantiates': SlotDefinition(name='instantiates', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element instantiates.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Controlled terms used to categorize an element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if you wish to use uncontrolled terms or terms that lack identifiers then use the keywords element'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='category', domain=None, slot_uri='dcterms:subject', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'structured_alias'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'keywords': SlotDefinition(name='keywords', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Keywords or tags used to describe the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='keyword', domain='element', slot_uri='schema:keywords', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'definition_uri': SlotDefinition(name='definition_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The native URI of the element. This is always within the namespace of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Formed by combining the default_prefix with the normalized element name'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:class_uri', 'linkml:slot_uri'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='filled in by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes': SlotDefinition(name='id_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An allowed list of prefixes for which identifiers must conform. The identifier of this class or slot must begin with the URIs referenced by this prefix', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Order of elements may be used to indicate priority order', 'If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by `:` (_should_ start if the list is open)', 'If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix (_should_ start if the list is open)'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml-model/issues/28'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes_are_closed': SlotDefinition(name='id_prefixes_are_closed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true, then the id_prefixes slot is treated as being closed, and any use of an id that does not have this prefix is considered a violation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/194'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'description': SlotDefinition(name='description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="a textual description of the element's purpose and use", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['definition'], structured_aliases={}, mappings=[], exact_mappings=['dcterms:description', 'schema:description'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:definition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_aliases': SlotDefinition(name='structured_aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of structured_alias objects, used to provide aliases in conjunction with additional metadata.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:aliases'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skosxl:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='structured_alias', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aliases': SlotDefinition(name='aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Alternate names/labels for the element. These do not alter the semantics of the schema, but may be useful to support search and alignment.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['not be confused with the metaslot alias.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['synonyms', 'alternate names', 'alternative labels', 'designations'], structured_aliases={}, mappings=[], exact_mappings=['schema:alternateName'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated': SlotDefinition(name='deprecated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Description of why and when this element will no longer be used', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note that linkml does not use a boolean to indicate deprecation status - the presence of a string value in this field is sufficient to indicate deprecation.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:deprecated'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'todos': SlotDefinition(name='todos', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Outstanding issues that needs resolution', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'notes': SlotDefinition(name='notes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='editorial notes about an element intended primarily for internal consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:editorialNote', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'comments': SlotDefinition(name='comments', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='notes and comments about an element intended primarily for external consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['rdfs:comment'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:note', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_subset': SlotDefinition(name='in_subset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='used to indicate membership of a term in a defined subset of terms used for a particular domain or application.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of use in the translator_minimal subset in the biolink model, holding the minimal set of predicates used in a translator knowledge graph'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='OIO:inSubset', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'from_schema': SlotDefinition(name='from_schema', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='id of the schema that defined the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["A stronger model would be range schema_definition, but this doesn't address the import model"], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:inScheme', array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imported_from': SlotDefinition(name='imported_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the imports entry that this element was derived from. Empty means primary source', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'see_also': SlotDefinition(name='see_also', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of related entities or URLs that may be of relevance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:seeAlso', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owned_by': SlotDefinition(name='owned_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that owns or is the steward of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['steward', 'owner'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:isDefinedBy'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_by': SlotDefinition(name='created_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that created the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'contributors': SlotDefinition(name='contributors', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that contributed to the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:contributor', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_on': SlotDefinition(name='created_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was created', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'last_updated_on': SlotDefinition(name='last_updated_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was last updated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:lastUpdatedOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'modified_by': SlotDefinition(name='modified_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that modified the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='oslc:modifiedBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'status': SlotDefinition(name='status', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='status of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bibo:draft', description=None, object=None)], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://www.hl7.org/fhir/valueset-publication-status.html', 'https://www.hl7.org/fhir/versions.html#std-process'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['workflow status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='bibo:status', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'literal_form': SlotDefinition(name='literal_form', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The literal lexical form of a structured alias; i.e the actual alias value.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alias_name', 'string_value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='skosxl:literalForm', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_predicate': SlotDefinition(name='alias_predicate', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The relationship between an element and its alias.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='rdf:predicate', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='predicate', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alias_predicate_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_contexts': SlotDefinition(name='alias_contexts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The context in which an alias should be applied', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='contexts', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_language': SlotDefinition(name='in_language', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.rfc-editor.org/rfc/bcp/bcp47.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='the primary language used in the sources', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Recommended to use a string from IETF BCP 47'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='schema:inLanguage', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source': SlotDefinition(name='source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A related resource from which the element is derived.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The described resource may be derived from the related resource in whole or in part'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['origin', 'derived from'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['prov:wasDerivedFrom', 'schema:isBasedOn'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:source', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'publisher': SlotDefinition(name='publisher', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An entity responsible for making the resource available', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:publisher', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class or slot from which inheritable metaslots are propagated from. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abstract': SlotDefinition(name='abstract', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot cannot be directly instantiated and is intended for grouping purposes.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixin': SlotDefinition(name='mixin', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot is intended to be inherited from without being an is_a parent. mixins should not be inherited from using is_a, except by other mixins.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['trait'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent classes or slots from which inheritable metaslots are propagated from.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierarchy, while keeping the benefits of multiple inheritance'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['traits'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class.", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'values_from': SlotDefinition(name='values_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The identifier of a "value set" -- a set of identifiers that form the possible values for the range of a slot. Note: this is different than \'subproperty_of\' in that \'subproperty_of\' is intended to be a single ontology term while \'values_from\' is the identifier of an entire value set. Additionally, this is different than an enumeration in that in an enumeration, the values of the enumeration are listed directly in the model itself. Setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set': SlotDefinition(name='code_set', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the identifier of an enumeration code set.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_version': SlotDefinition(name='code_set_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version identifier of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['we assume that version identifiers lexically sort in temporal order. Recommend semver when possible'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_tag': SlotDefinition(name='code_set_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version tag of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['enum_expression cannot have both a code_set_tag and a code_set_version'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pv_formula': SlotDefinition(name='pv_formula', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Defines the specific formula to be used to generate the permissible values.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['you cannot have BOTH the permissible_values and permissible_value_formula tag', 'code_set must be supplied for this to be valid'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pv_formula_options', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'permissible_values': SlotDefinition(name='permissible_values', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of possible values for a slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['coded values'], structured_aliases={}, mappings=[], exact_mappings=['cdisc:PermissibleValue'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_uri': SlotDefinition(name='enum_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the enum that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include': SlotDefinition(name='include', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be included, after subtracting the minus set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minus': SlotDefinition(name='minus', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be subtracted from the enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherits': SlotDefinition(name='inherits', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum definition that is used as the basis to create a new enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['All permissible values for all inherited enums are copied to form the initial seed set'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'matches': SlotDefinition(name='matches', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a match query that is used to calculate the list of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='match_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier_pattern': SlotDefinition(name='identifier_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A regular expression that is used to obtain a set of identifiers from a source_ontology to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='match_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'concepts': SlotDefinition(name='concepts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of identifiers that are used to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reachable_from': SlotDefinition(name='reachable_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a query for obtaining a list of permissible values based on graph reachability', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='reachability_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_ontology': SlotDefinition(name='source_ontology', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An ontology or vocabulary or terminology that is used in a query to obtain a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['examples include schema.org, wikidata, or an OBO ontology', 'for obo ontologies we recommend CURIEs of the form obo:cl, obo:envo, etc'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['terminology', 'vocabulary'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_direct': SlotDefinition(name='is_direct', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the reachability query should only include directly related nodes, if False then include also transitively connected', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['non-transitive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse_up': SlotDefinition(name='traverse_up', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the direction of the reachability query is reversed and ancestors are retrieved', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestors'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include_self': SlotDefinition(name='include_self', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the query is reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reflexive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relationship_types': SlotDefinition(name='relationship_types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of relationship types (properties) that are used in a reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['predicates', 'properties'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_nodes': SlotDefinition(name='source_nodes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of nodes that are used in the reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'text': SlotDefinition(name='text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The actual permissible value itself', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['there are no constraints on the text of the permissible value, but for many applications you may want to consider following idiomatic forms and using computer-friendly forms'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:notation'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'meaning': SlotDefinition(name='meaning', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value meaning of a permissible value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['we may want to change the range of this (and other) elements in the model to an entitydescription type construct'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/ISO/IEC_11179'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV meaning'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id': SlotDefinition(name='id', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The official schema URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'emit_prefixes': SlotDefinition(name='emit_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'version': SlotDefinition(name='version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='particular version of schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:schemaVersion'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='pav:version', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imports': SlotDefinition(name='imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of schemas that are to be included in this schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_imports': SlotDefinition(name='structured_imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of specifications for how to import elements from external schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='import_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'license': SlotDefinition(name='license', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='license for the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='dcterms:license', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_curi_maps': SlotDefinition(name='default_curi_maps', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_prefix': SlotDefinition(name='default_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix that is used for all elements within a schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='default_ns', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_range': SlotDefinition(name='default_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='default slot range to be used if range element is omitted from a slot definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subsets': SlotDefinition(name='subsets', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all subset definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['OIO:hasSubset'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'types': SlotDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all type definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enums': SlotDefinition(name='enums', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all enum definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_definitions': SlotDefinition(name='slot_definitions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all slot definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note the formal name of this element is slot_definitions, but it has alias slots, which is the canonical form used in yaml/json serializes of schemas.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='slots', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classes': SlotDefinition(name='classes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all class definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'metamodel_version': SlotDefinition(name='metamodel_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Version of the metamodel used to load the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file': SlotDefinition(name='source_file', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name, uri or description of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_date': SlotDefinition(name='source_file_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='modification date of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_size': SlotDefinition(name='source_file_size', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='size in bytes of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'generation_date': SlotDefinition(name='generation_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='date and time that the schema was loaded/generated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slots': SlotDefinition(name='slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='collection of slot names that are applicable to a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the list of applicable slots is inherited from parent classes', 'This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_usage': SlotDefinition(name='slot_usage', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the refinement of a slot in the context of the containing class definition.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_range': SlotDefinition(name='enum_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An inlined enumeration', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range_expression': SlotDefinition(name='range_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A range that is described as a boolean expression combining existing ranges', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['one use for this is being able to describe a range using any_of expressions, for example to combine two enums'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['path_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean_slot': SlotDefinition(name='boolean_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A grouping of slots that expression a boolean operator over a list of operands', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if at least one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:or'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=101, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if only one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:xone'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=103, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if none of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:not'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=105, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if all of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:and'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=107, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'preconditions': SlotDefinition(name='preconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold in order for the rule to be applicable to an instance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if', 'body', 'antecedents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=111, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:condition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'postconditions': SlotDefinition(name='postconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['then', 'head', 'consequents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=113, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elseconditions': SlotDefinition(name='elseconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions no not hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['else'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=115, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bidirectional': SlotDefinition(name='bidirectional', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in addition to preconditions entailing postconditions, the postconditions entail the preconditions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['iff', 'if and only if'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'open_world': SlotDefinition(name='open_world', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rank': SlotDefinition(name='rank', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the relative order in which the element occurs, lower values are given precedence', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the rank of an element does not affect the semantics'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['order', 'precedence', 'display order'], structured_aliases={}, mappings=[], exact_mappings=['qudt:order', 'qb:order'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:order', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'class_rule'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deactivated': SlotDefinition(name='deactivated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a deactivated rule is not executed by the rules engine', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:deactivated', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the collection of rules that apply to all members of this class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri='sh:rule', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classification_rules': SlotDefinition(name='classification_rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The collection of classification rules that apply to all members of this class. Classification rules allow for automatically assigning the instantiated type of an instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_conditions': SlotDefinition(name='slot_conditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='expresses constraints on a group of slots for a class expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'attributes': SlotDefinition(name='attributes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Inline definition of slots', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'class_uri': SlotDefinition(name='class_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning class_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subclass_of': SlotDefinition(name='subclass_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='DEPRECATED -- rdfs:subClassOf to be emitted in OWL generation', alt_descriptions={}, title=None, deprecated='Use is_a instead', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:subClassOf'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'defining_slots': SlotDefinition(name='defining_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that the domain element consists exactly of the members of the element in the range.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['this only applies in the OWL generation'], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tree_root': SlotDefinition(name='tree_root', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates that this is the Container class which forms the root of the serialized document structure in tree serializations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['each schema should have at most one tree root'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/intro/tutorial02.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_keys': SlotDefinition(name='unique_keys', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of named unique keys for this class. Unique keys may be singular or compound.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#unique-key'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:hasKey'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='unique_key', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_name': SlotDefinition(name='unique_key_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unique key', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'consider_nulls_inequal': SlotDefinition(name='consider_nulls_inequal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='By default, None values are considered equal for the purposes of comparisons in determining uniqueness. Set this to true to treat missing values as per ANSI-SQL NULLs, i.e NULL=NULL is always False.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_slots': SlotDefinition(name='unique_key_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='list of slot names that form a key. The tuple formed from the values of all these slots should be unique.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_names_unique': SlotDefinition(name='slot_names_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then induced/mangled slot names are not created for class_usage and attributes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain': SlotDefinition(name='domain', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the subject of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts that X is an instance of C1\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the object of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts Y is an instance of C2\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['range is underspecified, as not all elements can appear as the range of a slot.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value domain'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent='default_range', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['enum_binding', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_uri': SlotDefinition(name='slot_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the slot in a linked data context. The URI may come from any namespace and may be shared between schemas.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning slot_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='slot_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'multivalued': SlotDefinition(name='multivalued', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that slot can have more than one value and should be represented using a list or collection structure.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'array': SlotDefinition(name='array', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='coerces the value of the slot into an array and defines the dimensions of that array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='array_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dimensions': SlotDefinition(name='dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='definitions of each axis in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['axes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=True, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='dimension_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_number_dimensions': SlotDefinition(name='minimum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='minimum number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_number_dimensions': SlotDefinition(name='maximum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='maximum number of dimensions in the array, or False if explicitly no maximum. If this is unset, and an explicit list of dimensions are passed using dimensions, then this is interpreted as a closed list and the maximum_number_dimensions is the length of the dimensions list, unless this value is set to False', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_number_dimensions cannot be less than minimum_number_dimensions'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])], all_of=[]), 'exact_number_dimensions': SlotDefinition(name='exact_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='exact number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_number_dimensions is set, then minimum_number_dimensions and maximum_number_dimensions must be unset or have the same value'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherited': SlotDefinition(name='inherited', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the *value* of a slot is inherited by subclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only', 'Inherited applies to slot values. Parent *slots* are always inherited by subclasses'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'readonly': SlotDefinition(name='readonly', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If present, slot is read only. Text explains why', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ifabsent': SlotDefinition(name='ifabsent', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='function that provides a default value for the slot.\n * [Tt]rue -- boolean True\n * [Ff]alse -- boolean False\n * bnode -- blank node identifier\n * class_curie -- CURIE for the containing class\n * class_uri -- URI for the containing class\n * default_ns -- schema default namespace\n * default_range -- schema default range\n * int(value) -- integer value\n * slot_uri -- URI for the slot\n * slot_curie -- CURIE for the slot\n * string(value) -- string value\n * EnumName(PermissibleValue) -- enum value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:equals_expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:defaultValue'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implicit_prefix': SlotDefinition(name='implicit_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Causes the slot value to be interpreted as a uriorcurie after prefixing with this string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_specification_constant': SlotDefinition(name='value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain the a slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_value_specification_constant': SlotDefinition(name='list_value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_presence': SlotDefinition(name='value_presence', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if PRESENT then a value must be present (for lists there must be at least one value). If ABSENT then a value must be absent (for lists, must be empty)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='presence_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string': SlotDefinition(name='equals_string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number': SlotDefinition(name='equals_number', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range of a number and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_expression': SlotDefinition(name='equals_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot must equal the value of the evaluated expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["for example, a 'length' slot may have an equals_expression with value '(end-start)+1'"], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/developers/inference.html', 'https://linkml.io/linkml/schemas/advanced.html#equals-expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact_cardinality': SlotDefinition(name='exact_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the exact number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_cardinality is set, then minimum_cardinalty and maximum_cardinality must be unset or have the same value'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_cardinality': SlotDefinition(name='minimum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the minimum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_cardinality': SlotDefinition(name='maximum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the maximum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_cardinality cannot be less than minimum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string_in': SlotDefinition(name='equals_string_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number_in': SlotDefinition(name='equals_number_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range number and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_member': SlotDefinition(name='has_member', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with at least one member satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_members': SlotDefinition(name='all_members', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with all members satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'singular_name': SlotDefinition(name='singular_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name that is used in the singular form', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this may be used in some schema translations where use of a singular form is idiomatic, for example RDF'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:altLabel'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'required': SlotDefinition(name='required', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot must be present in instances of the class definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'recommended': SlotDefinition(name='recommended', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot should be present in instances of the class definition, but this is not required', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['This is to be used where not all data is expected to conform to having a required field', 'If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/177'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inapplicable': SlotDefinition(name='inapplicable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that values for this slot must not be present', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['By default all slots are applicable. The main use case for this slot is as an override in a subclass'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined': SlotDefinition(name='inlined', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['classes without keys or identifiers are necessarily inlined as lists', 'only applicable in tree-like serializations, e.g json, yaml'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_list': SlotDefinition(name='inlined_as_list', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The default loader will accept either list or dictionary form as input. This parameter controls internal\nrepresentation and output.', 'A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key\nis the key or identifier and whose value is the one additional element. This form is still stored according\nto the inlined_as_list setting.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_simple_dict': SlotDefinition(name='inlined_as_simple_dict', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a simple dict whose values are all atoms', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=28, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_ordered': SlotDefinition(name='list_elements_ordered', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the order of elements of a multivalued slot is guaranteed to be preserved. If False, the order may still be preserved but this is not guaranteed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_unique': SlotDefinition(name='list_elements_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then there must be no duplicates in the elements of a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shared': SlotDefinition(name='shared', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the relationship between the slot domain and range is many to one or many to many', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inverse functional', 'many to one or many'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'key': SlotDefinition(name='key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identify the elements within a single container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['key is inherited', 'a given domain can have at most one key slot (restriction to be removed in the future)', 'identifiers and keys are mutually exclusive. A given domain cannot have both', 'a key slot is automatically required. Keys cannot be optional'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier': SlotDefinition(name='identifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identifies the elements. There can be at most one identifier or key per container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['identifier is inherited', 'a key slot is automatically required. Identifiers cannot be optional', 'a given domain can have at most one identifier', 'identifiers and keys are mutually exclusive. A given domain cannot have both'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Identifier', 'linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary key', 'ID', 'UID', 'code'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'designates_type': SlotDefinition(name='designates_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/type-designators.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['type designator'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias': SlotDefinition(name='alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of alias is used within this metamodel, slot_definitions is aliases as slots', 'not to be confused with aliases, which indicates a set of terms to be used for search purposes.'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='skos:prefLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owner': SlotDefinition(name='owner', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the "owner" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot', alt_descriptions={}, title=None, deprecated='Will be replaced by domain_of and eventually removed', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by loader -- either class domain or slot domain', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain_of': SlotDefinition(name='domain_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the class(es) that reference the slot in a "slots" or "slot_usage" context', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:domainIncludes', 'SIO:000011'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_usage_slot': SlotDefinition(name='is_usage_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that this slot was defined in a slot_usage situation', alt_descriptions={}, title=None, deprecated='Replaced by usage_slot_name', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'usage_slot_name': SlotDefinition(name='usage_slot_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of the slot referenced in the slot_usage', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subproperty_of': SlotDefinition(name='subproperty_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Ontology property which this slot is a subproperty of. Note: setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='RO:HOM0000001', description='this is the RO term for "in homology relationship with", and used as a value of subproperty of this means that any ontological child (related to RO:HOM0000001 via an is_a relationship), is a valid value for the slot that declares this with the subproperty_of tag. This differs from the \'values_from\' meta model component in that \'values_from\' requires the id of a value set (said another way, if an entire ontology had a curie/identifier that was the identifier for the entire ontology, then that identifier would be used in \'values_from.\')', object=None)], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='rdfs:subPropertyOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'children_are_mutually_disjoint': SlotDefinition(name='children_are_mutually_disjoint', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true then all direct is_a children are mutually disjoint and share no instances in common', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_logical_characteristic': SlotDefinition(name='relational_logical_characteristic', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract grouping for metaslots that describe logical properties of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symmetric': SlotDefinition(name='symmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is symmetric, and i.s=v, then v.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:SymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asymmetric': SlotDefinition(name='asymmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['asymmetry is the combination of antisymmetry and irreflexivity'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:AsymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive': SlotDefinition(name='reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is reflexive, then i.s=i for all instances i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:ReflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'irreflexive': SlotDefinition(name='irreflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is irreflexive, then there exists no i such i.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:IrreflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'locally_reflexive': SlotDefinition(name='locally_reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is locally_reflexive, then i.s=i for all instances i where s is a class slot for the type of i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive': SlotDefinition(name='transitive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is transitive, and i.s=z, and s.s=j, then i.s=j', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:TransitiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive_form_of': SlotDefinition(name='transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Example: ancestor_of is the transitive_form_of parent_of'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive_transitive_form_of': SlotDefinition(name='reflexive_transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='transitive_form_of including the reflexive case', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='transitive_form_of', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inverse': SlotDefinition(name='inverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="indicates that any instance of d s r implies that there is also an instance of r s' d", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='owl:inverseOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_class_field': SlotDefinition(name='is_class_field', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that for any instance, i, the domain of this slot will include an assertion of i s range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'role': SlotDefinition(name='role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a textual descriptor that indicates the role played by the slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the primary use case for this slot is to provide a textual descriptor of a generic slot name when used in the context of a more specific class'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_value': SlotDefinition(name='minimum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or higher than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['low value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_value': SlotDefinition(name='maximum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or lower than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['high value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'interpolated': SlotDefinition(name='interpolated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then the pattern is first string interpolated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'partial_match': SlotDefinition(name='partial_match', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if not true then the pattern must match the whole string, as if enclosed in ^...$', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pattern': SlotDefinition(name='pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'syntax': SlotDefinition(name='syntax', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string. May be interpolated.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_pattern': SlotDefinition(name='structured_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to the regular expression in the pattern expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#structured-patterns'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pattern_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'string_serialization': SlotDefinition(name='string_serialization', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots.\nWe call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion.\nImplementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects\nFor example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/issues/128'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'type_mapping'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bindings': SlotDefinition(name='bindings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of enum bindings that specify how a slot can be bound to a permissible value from an enumeration.\nLinkML provides enums to allow string values to be restricted to one of a set of permissible values (specified statically or dynamically).\nEnum bindings allow enums to be bound to any object, including complex nested objects. For example, given a (generic) class Concept with slots id and label, it may be desirable to restrict the values the id takes on in a given context. For example, a HumanSample class may have a slot for representing sample site, with a range of concept, but the values of that slot may be restricted to concepts from a particular branch of an anatomy ontology.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_binding', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'binds_value_of': SlotDefinition(name='binds_value_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A path to a slot that is being bound to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_binding', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'obligation_level': SlotDefinition(name='obligation_level', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='obligation_level_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_mappings': SlotDefinition(name='type_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="A collection of type mappings that specify how a slot's range should be mapped or serialized in different frameworks", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_mapping', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'framework_key': SlotDefinition(name='framework_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of a format that can be used to serialize LinkML data. The string value should be a code from the LinkML frameworks vocabulary, but this is not strictly enforced', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='framework', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mapped_type': SlotDefinition(name='mapped_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='type to coerce to', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='type', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'typeof': SlotDefinition(name='typeof', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A parent type from which type properties are inherited', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the target type definition of the typeof slot is referred to as the "parent type"', 'the type definition containing the typeof slot is referred to as the "child type"', 'type definitions without a typeof slot are referred to as a "root type"'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'base': SlotDefinition(name='base', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='python base type in the LinkML runtime that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['every root type must have a base', 'the base is inherited by child types but may be overridden. Base compatibility is not checked.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_uri': SlotDefinition(name='type_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The uri that defines the possible values for the type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps)", 'every root type must have a type uri'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='uri', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'repr': SlotDefinition(name='repr', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name of the python object that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_text': SlotDefinition(name='alt_description_text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='text of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_source': SlotDefinition(name='alt_description_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the source of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='source', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_descriptions': SlotDefinition(name='alt_descriptions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A sourced alternative description for an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alternate definitions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alt_description', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value': SlotDefinition(name='value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri='skos:example', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_description': SlotDefinition(name='value_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='description of what the value is doing', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_object': SlotDefinition(name='value_object', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='direct object representation of the example', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='object', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'examples': SlotDefinition(name='examples', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example usages of an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['vann:example'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='example', domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='example', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_prefix': SlotDefinition(name='prefix_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix components of a prefix expansions. This is the part that appears before the colon in a CURIE.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:prefix', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_reference': SlotDefinition(name='prefix_reference', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The namespace to which a prefix expands to.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:namespace', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefixes': SlotDefinition(name='prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of prefix expansions that specify how CURIEs can be expanded to URIs', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='sh:declare', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='prefix', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_key': SlotDefinition(name='setting_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the variable name for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_value': SlotDefinition(name='setting_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The value assigned for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'settings': SlotDefinition(name='settings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of global variable settings', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['global variables are used in string interpolation in structured patterns'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['constants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_from': SlotDefinition(name='import_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_as': SlotDefinition(name='import_as', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_map': SlotDefinition(name='import_map', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_source': SlotDefinition(name='local_name_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the ncname of the source of the name', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_value': SlotDefinition(name='local_name_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name assigned to an element in a given ontology', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_names': SlotDefinition(name='local_names', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='local_name', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_group': SlotDefinition(name='slot_group', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='allows for grouping of related slots into a grouping slot that serves the role of a group', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['slot groups do not change the semantics of a model but are a useful way of visually grouping related slots'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='sh:group', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression='True', exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this slot is a grouping slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:PropertyGroup'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in a sequential list, this indicates the next member', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reversed': SlotDefinition(name='reversed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if the slot is to be inversed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse': SlotDefinition(name='traverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot to traverse', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'path_rule': SlotDefinition(name='path_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'represents_relationship': SlotDefinition(name='represents_relationship', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this class represents a relationship rather than an entity', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond', 'in the context of RDF, this should be used when instances of the class are `rdf:Statement`s', 'in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['rdf:Statement', 'https://patterns.dataincubator.org/book/qualified-relation.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['is_reified'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_role': SlotDefinition(name='relational_role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the role a slot on a relationship class plays, for example, the subject, object or predicate roles', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this should only be used on slots that are applicable to class that represent relationships', 'in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary', 'in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reification_role'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='relational_role_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'Anything': ClassDefinition(name='Anything', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri='linkml:Any', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'common_metadata': ClassDefinition(name='common_metadata', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Generic metadata shared across definitions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['description', 'alt_descriptions', 'title', 'deprecated', 'todos', 'notes', 'comments', 'examples', 'in_subset', 'from_schema', 'imported_from', 'source', 'in_language', 'see_also', 'deprecated element has exact replacement', 'deprecated element has possible replacement', 'aliases', 'structured_aliases', 'mappings', 'exact mappings', 'close mappings', 'related mappings', 'narrow mappings', 'broad mappings', 'created_by', 'contributors', 'created_on', 'last_updated_on', 'modified_by', 'status', 'rank', 'categories', 'keywords'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'element': ClassDefinition(name='element', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A named element in the model', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data element', 'object'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['name', 'id_prefixes', 'id_prefixes_are_closed', 'definition_uri', 'local_names', 'conforms_to', 'implements', 'instantiates'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'schema_definition': ClassDefinition(name='schema_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of definitions that make up a schema or a data model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_dictionary'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data dictionary', 'data model', 'information model', 'logical model', 'schema', 'model'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['qb:ComponentSet', 'owl:Ontology'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'version', 'imports', 'license', 'prefixes', 'emit_prefixes', 'default_curi_maps', 'default_prefix', 'default_range', 'subsets', 'types', 'enums', 'slot_definitions', 'classes', 'metamodel_version', 'source_file', 'source_file_date', 'source_file_size', 'generation_date', 'slot_names_unique', 'settings', 'bindings'], slot_usage={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a unique name for the schema that is both human-readable and consists of only characters from the NCName set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=True, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_expression': ClassDefinition(name='type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract class grouping named types and anonymous type expressions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'equals_string', 'equals_string_in', 'equals_number', 'minimum_value', 'maximum_value', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_type_expression': ClassDefinition(name='anonymous_type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A type expression that is not a top-level named type definition. Used for nesting.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_definition': ClassDefinition(name='type_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that whose instances are atomic scalar values that can be mapped to primitive types', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['typeof', 'base', 'type_uri', 'repr', 'union_of'], slot_usage={'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'subset_definition': ClassDefinition(name='subset_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that can be used to group other metamodel elements', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'definition': ClassDefinition(name='definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='abstract base class for core metaclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_definition'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='element', abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['is_a', 'abstract', 'mixin', 'mixins', 'apply_to', 'values_from', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_expression': ClassDefinition(name='enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that constrains the range of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['code_set', 'code_set_tag', 'code_set_version', 'pv_formula', 'permissible_values', 'include', 'minus', 'inherits', 'reachable_from', 'matches', 'concepts'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_enum_expression': ClassDefinition(name='anonymous_enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum_expression that is not named', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_definition': ClassDefinition(name='enum_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances must be drawn from a specified set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['enum', 'enumeration', 'semantic enumeration', 'value set', 'term set', 'concept set', 'code set', 'Terminology Value Set', 'answer list', 'value domain'], structured_aliases={}, mappings=[], exact_mappings=['qb:HierarchicalCodeList', 'NCIT:C113497', 'cdisc:ValueDomain'], close_mappings=['skos:ConceptScheme'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['enum_uri'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_binding': ClassDefinition(name='enum_binding', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binding of a slot or a class to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'obligation_level', 'binds_value_of', 'pv_formula'], slot_usage={'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'match_query': ClassDefinition(name='match_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissivle values via a query that matches on properties of the external concepts.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['identifier_pattern', 'source_ontology'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'reachability_query': ClassDefinition(name='reachability_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissible values via walking from a set of source nodes to a set of descendants or ancestors over a set of relationship types.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['source_ontology', 'source_nodes', 'relationship_types', 'is_direct', 'include_self', 'traverse_up'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'structured_alias': ClassDefinition(name='structured_alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='object that contains meta data about a synonym or alias including where it came from (source) and its scope (narrow, broad, etc.)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['literal_form', 'alias_predicate', 'categories', 'alias_contexts'], slot_usage={'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The category or categories of an alias. This can be drawn from any relevant vocabulary', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://w3id.org/mod#acronym', description='An acronym', object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='skosxl:Label', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'expression': ClassDefinition(name='expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='general mixin for any class that can represent some form of expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_expression': ClassDefinition(name='anonymous_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract parent class for any nested expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['anonymous expressions are useful for when it is necessary to build a complex expression without introducing a named element for each sub-expression'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'path_expression': ClassDefinition(name='path_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that describes an abstract path from an object to another through a sequence of slot lookups', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['followed_by', 'none_of', 'any_of', 'all_of', 'exactly_one_of', 'reversed', 'traverse', 'range_expression'], slot_usage={'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_expression': ClassDefinition(name='slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that constrains the range of values a slot can take', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'range_expression', 'enum_range', 'bindings', 'required', 'recommended', 'multivalued', 'inlined', 'inlined_as_list', 'minimum_value', 'maximum_value', 'pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'value_presence', 'equals_string', 'equals_string_in', 'equals_number', 'equals_expression', 'exact_cardinality', 'minimum_cardinality', 'maximum_cardinality', 'has_member', 'all_members', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_slot_expression': ClassDefinition(name='anonymous_slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_definition': ClassDefinition(name='slot_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that describes how instances are related to other instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['slot', 'field', 'property', 'attribute', 'column', 'variable'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdf:Property', 'qb:ComponentProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['singular_name', 'domain', 'slot_uri', 'array', 'inherited', 'readonly', 'ifabsent', 'list_elements_unique', 'list_elements_ordered', 'shared', 'key', 'identifier', 'designates_type', 'alias', 'owner', 'domain_of', 'subproperty_of', 'symmetric', 'reflexive', 'locally_reflexive', 'irreflexive', 'asymmetric', 'transitive', 'inverse', 'is_class_field', 'transitive_form_of', 'reflexive_transitive_form_of', 'role', 'is_usage_slot', 'usage_slot_name', 'relational_role', 'slot_group', 'is_grouping_slot', 'path_rule', 'disjoint_with', 'children_are_mutually_disjoint', 'union_of', 'type_mappings'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent slot from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin slots from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_expression': ClassDefinition(name='class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A boolean expression that can be used to dynamically determine membership of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['any_of', 'exactly_one_of', 'none_of', 'all_of', 'slot_conditions'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_class_expression': ClassDefinition(name='anonymous_class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['is_a'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_definition': ClassDefinition(name='class_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances are complex objects that may have slot-value assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['table', 'record', 'template', 'message', 'observation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:Class'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['slots', 'slot_usage', 'attributes', 'class_uri', 'subclass_of', 'union_of', 'defining_slots', 'tree_root', 'unique_keys', 'rules', 'classification_rules', 'slot_names_unique', 'represents_relationship', 'disjoint_with', 'children_are_mutually_disjoint'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin classes from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_level_rule': ClassDefinition(name='class_level_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that is applied to classes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_rule': ClassDefinition(name='class_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that applies to instances of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if rule'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:TripleRule', 'swrl:Imp'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='class_level_rule', abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['preconditions', 'postconditions', 'elseconditions', 'bidirectional', 'open_world', 'rank', 'deactivated'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'array_expression': ClassDefinition(name='array_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['exact_number_dimensions', 'minimum_number_dimensions', 'maximum_number_dimensions', 'dimensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'dimension_expression': ClassDefinition(name='dimension_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines one of the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['alias', 'maximum_cardinality', 'minimum_cardinality', 'exact_cardinality'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'pattern_expression': ClassDefinition(name='pattern_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a regular expression pattern used to evaluate conformance of a string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['syntax', 'interpolated', 'partial_match'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'import_expression': ClassDefinition(name='import_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression describing an import', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['import_from', 'import_as', 'import_map'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'setting': ClassDefinition(name='setting', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='assignment of a key to a value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['setting_key', 'setting_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'prefix': ClassDefinition(name='prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='prefix URI tuple', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['prefix_prefix', 'prefix_reference'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'local_name': ClassDefinition(name='local_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed label', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['local_name_source', 'local_name_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'example': ClassDefinition(name='example', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='usage example and description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['value', 'value_description', 'value_object'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'alt_description': ClassDefinition(name='alt_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['structured description'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['alt_description_source', 'alt_description_text'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'permissible_value': ClassDefinition(name='permissible_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a permissible value, accompanied by intended text and an optional mapping to a concept URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:Concept'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['text', 'description', 'meaning', 'unit', 'instantiates', 'implements', 'is_a', 'mixins'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'unique_key': ClassDefinition(name='unique_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of slots whose values uniquely identify an instance of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['unique_key_name', 'unique_key_slots', 'consider_nulls_inequal'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_mapping': ClassDefinition(name='type_mapping', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Represents how a slot or type can be serialized to a format.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['framework_key', 'mapped_type', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file=None, source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:units': SchemaDefinition(name='units', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Units datamodel', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/units', version=None, imports=['linkml:types', 'linkml:extensions', 'linkml:annotations', 'linkml:mappings'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'unit': SlotDefinition(name='unit', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an encoding of a unit', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:unit', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='UnitOfMeasure', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ucum_code': SlotDefinition(name='ucum_code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='associates a QUDT unit with its UCUM code (case-sensitive).', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='UnitOfMeasure', slot_uri='qudt:ucumCode', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'derivation': SlotDefinition(name='derivation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Expression for deriving this unit from other units', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_quantity_kind': SlotDefinition(name='has_quantity_kind', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Concept in a vocabulary or ontology that denotes the kind of quantity being measured, e.g. length', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Potential ontologies include but are not limited to PATO, NCIT, OBOE, qudt.quantityKind'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:hasQuantityKind', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'iec61360code': SlotDefinition(name='iec61360code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:iec61360Code', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symbol': SlotDefinition(name='symbol', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unit encoded as a symbol', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:symbol', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abbreviation': SlotDefinition(name='abbreviation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abbreviation for a unit is a short ASCII string that is used in place of the full name for the unit in contexts where non-ASCII characters would be problematic, or where using the abbreviation will enhance readability. When a power of a base unit needs to be expressed, such as squares this can be done using abbreviations rather than symbols (source: qudt)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:abbreviation', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'descriptive_name': SlotDefinition(name='descriptive_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the spelled out name of the unit, for example, meter', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'UnitOfMeasure': ClassDefinition(name='UnitOfMeasure', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A unit of measure, or unit, is a particular quantity value that has been chosen as a scale for measuring other quantities the same kind (more generally of equivalent dimension).', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['symbol', 'abbreviation', 'descriptive_name', 'exact mappings', 'ucum_code', 'derivation', 'has_quantity_kind', 'iec61360code'], slot_usage={'exact mappings': SlotDefinition(name='exact mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used to link a unit to equivalent concepts in ontologies such as UO, SNOMED, OEM, OBOE, NCIT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Do not use this to encode mappings to systems for which a dedicated field exists'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='qudt:Unit', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'ucum_code': SlotDefinition(name='ucum_code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'iec61360code': SlotDefinition(name='iec61360code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'symbol': SlotDefinition(name='symbol', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'exact_mappings': SlotDefinition(name='exact_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])})], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/units.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:mappings': SchemaDefinition(name='mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='LinkML model for mappings', alt_descriptions={}, title='LinkML Schema Mappings', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/mappings', version='2.0.0', imports=['linkml:types'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'IAO': Prefix(prefix_prefix='IAO', prefix_reference='http://purl.obolibrary.org/obo/IAO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'OIO', 'IAO'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'mappings': SlotDefinition(name='mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['xrefs', 'identifiers', 'alternate identifiers', 'alternate ids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:mappingRelation', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact mappings': SlotDefinition(name='exact mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have identical meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:exactMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['UnitOfMeasure', 'common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'close mappings': SlotDefinition(name='close mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have close meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:closeMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'related mappings': SlotDefinition(name='related mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have related meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:relatedMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'narrow mappings': SlotDefinition(name='narrow mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have narrower meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:narrowMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'broad mappings': SlotDefinition(name='broad mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have broader meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:broadMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated element has exact replacement': SlotDefinition(name='deprecated element has exact replacement', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='When an element is deprecated, it can be automatically replaced by this uri or curie', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=['IAO:0100001'], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated element has possible replacement': SlotDefinition(name='deprecated element has possible replacement', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='When an element is deprecated, it can be potentially replaced by this uri or curie', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=['OIO:consider'], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/mappings.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:types': SchemaDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Shared type definitions for the core LinkML mode and metamodel', alt_descriptions={}, title='Core LinkML metamodel types', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/types', version=None, imports=[], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'xsd': Prefix(prefix_prefix='xsd', prefix_reference='http://www.w3.org/2001/XMLSchema#'), 'shex': Prefix(prefix_prefix='shex', prefix_reference='http://www.w3.org/ns/shex#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/')}, emit_prefixes=[], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={'string': TypeDefinition(name='string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A character string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['In RDF serializations, a slot with range of string is treated as a literal or type xsd:string. If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "string".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Text'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'integer': TypeDefinition(name='integer', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An integer', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "integer".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Integer'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='int', uri='xsd:integer', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean': TypeDefinition(name='boolean', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binary (true or false) value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "boolean".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Boolean'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Bool', uri='xsd:boolean', repr='bool', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'float': TypeDefinition(name='float', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:float specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "float".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Float'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='float', uri='xsd:float', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'double': TypeDefinition(name='double', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:double specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "double".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:Float'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='float', uri='xsd:double', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'decimal': TypeDefinition(name='decimal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number with arbitrary precision that conforms to the xsd:decimal specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "decimal".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=['schema:Number'], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Decimal', uri='xsd:decimal', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'time': TypeDefinition(name='time', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A time object represents a (local) time of day, independent of any particular day', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['URI is dateTime because OWL reasoners do not work with straight date or time', 'If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "time".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Time'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDTime', uri='xsd:time', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date': TypeDefinition(name='date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a date (year, month and day) in an idealized calendar', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["URI is dateTime because OWL reasoners don't work with straight date or time", 'If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "date".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Date'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDDate', uri='xsd:date', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'datetime': TypeDefinition(name='datetime', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of a date and time', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "datetime".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:DateTime'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDDateTime', uri='xsd:dateTime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date_or_datetime': TypeDefinition(name='date_or_datetime', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Either a date or a datetime', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "date_or_datetime".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='linkml:DateOrDatetime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uriorcurie': TypeDefinition(name='uriorcurie', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a URI or a CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "uriorcurie".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'curie': TypeDefinition(name='curie', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.w3.org/TR/curie/', implements=[], instantiates=[], extensions={}, annotations={}, description='a compact URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "curie".'], comments=['in RDF serializations this MUST be expanded to a URI', 'in non-RDF serializations MAY be serialized as the compact representation'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Curie', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uri': TypeDefinition(name='uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.ietf.org/rfc/rfc3987.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='a complete URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "uri".'], comments=['in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:URL'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='URI', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ncname': TypeDefinition(name='ncname', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Prefix part of CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "ncname".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='NCName', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'objectidentifier': TypeDefinition(name='objectidentifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A URI or CURIE that represents an object in the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "objectidentifier".'], comments=['Used for inheritance and type checking'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='ElementIdentifier', uri='shex:iri', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nodeidentifier': TypeDefinition(name='nodeidentifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A URI, CURIE or BNODE that represents a node in a model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "nodeidentifier".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='NodeIdentifier', uri='shex:nonLiteral', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'jsonpointer': TypeDefinition(name='jsonpointer', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://datatracker.ietf.org/doc/html/rfc6901', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "jsonpointer".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'jsonpath': TypeDefinition(name='jsonpath', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.ietf.org/archive/id/draft-goessner-dispatch-jsonpath-00.html', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "jsonpath".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sparqlpath': TypeDefinition(name='sparqlpath', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.w3.org/TR/sparql11-query/#propertypaths', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "sparqlpath".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, enums={}, slots={}, classes={}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/types.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:annotations': SchemaDefinition(name='annotations', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Annotations mixin', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/annotations', version='2.0.0', imports=['linkml:types', 'linkml:extensions'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'annotations': SlotDefinition(name='annotations', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of tag/text tuples with the semantics of OWL Annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='extensions', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='annotatable', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['annotatable', 'annotation'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='annotation', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'annotatable': ClassDefinition(name='annotatable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='mixin for classes that support annotations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['annotations'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'annotation': ClassDefinition(name='annotation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag/value pair with the semantics of OWL Annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], 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source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/annotations.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:extensions': SchemaDefinition(name='extensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Extension mixin', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/extensions', version='2.0.0', imports=['linkml:types'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'extensions': SlotDefinition(name='extensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag/text tuple attached to an arbitrary element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extensible', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['extension', 'extensible'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='extension', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'extension_tag': SlotDefinition(name='extension_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag associated with an extension', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extension', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='tag', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'extension_value': SlotDefinition(name='extension_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={'simple_dict_value': Annotation(tag='simple_dict_value', value=True, extensions={}, annotations={})}, description='the actual annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extension', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='value', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='AnyValue', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'AnyValue': ClassDefinition(name='AnyValue', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], 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slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'extensible': ClassDefinition(name='extensible', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='mixin for classes that support extension', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['extensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/extensions.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[])}, importmap={}, modifications=0, uuid='1fbd56e8-76b2-4776-affc-bd850cd8688b'), mappings={}, initial_metamodel_mappings={}, metamodel_mappings=defaultdict(, {'description': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#definition'), rdflib.term.URIRef('https://w3id.org/linkml/description'), rdflib.term.URIRef('http://purl.org/dc/terms/description'), rdflib.term.URIRef('http://schema.org/description')], 'is_a': [rdflib.term.URIRef('https://w3id.org/linkml/is_a'), rdflib.term.URIRef('https://w3id.org/linkml/is_a')], 'domain_of': [rdflib.term.URIRef('https://w3id.org/linkml/domain_of'), rdflib.term.URIRef('https://w3id.org/linkml/domain_of'), rdflib.term.URIRef('http://schema.org/domainIncludes'), rdflib.term.URIRef('http://semanticscience.org/resource/SIO_000011')], 'range': [rdflib.term.URIRef('https://w3id.org/linkml/range'), rdflib.term.URIRef('https://w3id.org/linkml/range')], 'exact_mappings': [rdflib.term.URIRef('http://www.w3.org/2002/07/owl#sameAs'), rdflib.term.URIRef('http://schema.org/sameAs')], 'ClassDefinition': [rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#Class'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Class'), rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#Concept')], 'SlotDefinition': [rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#Property'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ObjectProperty'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#DatatypeProperty'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AnnotationProperty')], 'AnyValue': [rdflib.term.URIRef('https://w3id.org/linkml/Any'), rdflib.term.URIRef('https://w3id.org/linkml/AnyValue')], 'extension': [rdflib.term.URIRef('https://w3id.org/linkml/Extension'), rdflib.term.URIRef('https://w3id.org/linkml/Extension')], 'extensible': [rdflib.term.URIRef('https://w3id.org/linkml/Extensible'), 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rdflib.term.URIRef('https://w3id.org/linkml/transitive_form_of')], 'reflexive_transitive_form_of': [rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of'), rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of')], 'inverse': [rdflib.term.URIRef('http://www.w3.org/2002/07/owl#inverseOf'), rdflib.term.URIRef('https://w3id.org/linkml/inverse')], 'is_class_field': [rdflib.term.URIRef('https://w3id.org/linkml/is_class_field'), rdflib.term.URIRef('https://w3id.org/linkml/is_class_field')], 'role': [rdflib.term.URIRef('https://w3id.org/linkml/role'), rdflib.term.URIRef('https://w3id.org/linkml/role')], 'minimum_value': [rdflib.term.URIRef('https://w3id.org/linkml/minimum_value'), rdflib.term.URIRef('https://w3id.org/linkml/minimum_value')], 'maximum_value': [rdflib.term.URIRef('https://w3id.org/linkml/maximum_value'), rdflib.term.URIRef('https://w3id.org/linkml/maximum_value')], 'interpolated': [rdflib.term.URIRef('https://w3id.org/linkml/interpolated'), rdflib.term.URIRef('https://w3id.org/linkml/interpolated')], 'partial_match': [rdflib.term.URIRef('https://w3id.org/linkml/partial_match'), rdflib.term.URIRef('https://w3id.org/linkml/partial_match')], 'pattern': [rdflib.term.URIRef('https://w3id.org/linkml/pattern'), rdflib.term.URIRef('https://w3id.org/linkml/pattern')], 'syntax': [rdflib.term.URIRef('https://w3id.org/linkml/syntax'), rdflib.term.URIRef('https://w3id.org/linkml/syntax')], 'structured_pattern': [rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern'), rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern')], 'string_serialization': [rdflib.term.URIRef('https://w3id.org/linkml/string_serialization'), rdflib.term.URIRef('https://w3id.org/linkml/string_serialization')], 'bindings': [rdflib.term.URIRef('https://w3id.org/linkml/bindings'), rdflib.term.URIRef('https://w3id.org/linkml/bindings')], 'binds_value_of': [rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of'), rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of')], 'obligation_level': [rdflib.term.URIRef('https://w3id.org/linkml/obligation_level'), rdflib.term.URIRef('https://w3id.org/linkml/obligation_level')], 'type_mappings': [rdflib.term.URIRef('https://w3id.org/linkml/type_mappings'), rdflib.term.URIRef('https://w3id.org/linkml/type_mappings')], 'framework_key': [rdflib.term.URIRef('https://w3id.org/linkml/framework_key'), rdflib.term.URIRef('https://w3id.org/linkml/framework_key')], 'mapped_type': [rdflib.term.URIRef('https://w3id.org/linkml/mapped_type'), rdflib.term.URIRef('https://w3id.org/linkml/mapped_type')], 'typeof': [rdflib.term.URIRef('https://w3id.org/linkml/typeof'), rdflib.term.URIRef('https://w3id.org/linkml/typeof')], 'base': [rdflib.term.URIRef('https://w3id.org/linkml/base'), rdflib.term.URIRef('https://w3id.org/linkml/base')], 'type_uri': [rdflib.term.URIRef('https://w3id.org/linkml/type_uri'), rdflib.term.URIRef('https://w3id.org/linkml/type_uri')], 'repr': [rdflib.term.URIRef('https://w3id.org/linkml/repr'), rdflib.term.URIRef('https://w3id.org/linkml/repr')], 'alt_description_text': [rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text'), rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text')], 'alt_description_source': [rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source'), rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source')], 'alt_descriptions': [rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions'), rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions')], 'value': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#example'), rdflib.term.URIRef('https://w3id.org/linkml/value')], 'value_description': [rdflib.term.URIRef('https://w3id.org/linkml/value_description'), rdflib.term.URIRef('https://w3id.org/linkml/value_description')], 'value_object': [rdflib.term.URIRef('https://w3id.org/linkml/value_object'), rdflib.term.URIRef('https://w3id.org/linkml/value_object')], 'examples': [rdflib.term.URIRef('https://w3id.org/linkml/examples'), rdflib.term.URIRef('https://w3id.org/linkml/examples'), rdflib.term.URIRef('https://vocab.org/vann/example')], 'prefix_prefix': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#prefix'), rdflib.term.URIRef('https://w3id.org/linkml/prefix_prefix')], 'prefix_reference': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#namespace'), rdflib.term.URIRef('https://w3id.org/linkml/prefix_reference')], 'prefixes': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#declare'), rdflib.term.URIRef('https://w3id.org/linkml/prefixes')], 'setting_key': [rdflib.term.URIRef('https://w3id.org/linkml/setting_key'), rdflib.term.URIRef('https://w3id.org/linkml/setting_key')], 'setting_value': [rdflib.term.URIRef('https://w3id.org/linkml/setting_value'), rdflib.term.URIRef('https://w3id.org/linkml/setting_value')], 'settings': [rdflib.term.URIRef('https://w3id.org/linkml/settings'), rdflib.term.URIRef('https://w3id.org/linkml/settings')], 'import_from': [rdflib.term.URIRef('https://w3id.org/linkml/import_from'), rdflib.term.URIRef('https://w3id.org/linkml/import_from')], 'import_as': [rdflib.term.URIRef('https://w3id.org/linkml/import_as'), rdflib.term.URIRef('https://w3id.org/linkml/import_as')], 'import_map': [rdflib.term.URIRef('https://w3id.org/linkml/import_map'), rdflib.term.URIRef('https://w3id.org/linkml/import_map')], 'local_name_source': [rdflib.term.URIRef('https://w3id.org/linkml/local_name_source'), rdflib.term.URIRef('https://w3id.org/linkml/local_name_source')], 'local_name_value': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#altLabel'), rdflib.term.URIRef('https://w3id.org/linkml/local_name_value')], 'local_names': [rdflib.term.URIRef('https://w3id.org/linkml/local_names'), rdflib.term.URIRef('https://w3id.org/linkml/local_names')], 'slot_group': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#group'), rdflib.term.URIRef('https://w3id.org/linkml/slot_group')], 'is_grouping_slot': [rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'), rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'), rdflib.term.URIRef('http://www.w3.org/ns/shacl#PropertyGroup')], 'followed_by': [rdflib.term.URIRef('https://w3id.org/linkml/followed_by'), rdflib.term.URIRef('https://w3id.org/linkml/followed_by')], 'reversed': [rdflib.term.URIRef('https://w3id.org/linkml/reversed'), rdflib.term.URIRef('https://w3id.org/linkml/reversed')], 'traverse': [rdflib.term.URIRef('https://w3id.org/linkml/traverse'), rdflib.term.URIRef('https://w3id.org/linkml/traverse')], 'path_rule': [rdflib.term.URIRef('https://w3id.org/linkml/path_rule'), rdflib.term.URIRef('https://w3id.org/linkml/path_rule')], 'represents_relationship': [rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship'), rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship')], 'relational_role': [rdflib.term.URIRef('https://w3id.org/linkml/relational_role'), rdflib.term.URIRef('https://w3id.org/linkml/relational_role')], 'pv_formula_options': [], 'presence_enum': [], 'relational_role_enum': [], 'alias_predicate_enum': [], 'obligation_level_enum': [], 'string': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/string'), rdflib.term.URIRef('http://schema.org/Text')], 'integer': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#integer'), rdflib.term.URIRef('https://w3id.org/linkml/integer'), rdflib.term.URIRef('http://schema.org/Integer')], 'boolean': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#boolean'), rdflib.term.URIRef('https://w3id.org/linkml/boolean'), rdflib.term.URIRef('http://schema.org/Boolean')], 'float': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#float'), rdflib.term.URIRef('https://w3id.org/linkml/float'), rdflib.term.URIRef('http://schema.org/Float')], 'double': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#double'), rdflib.term.URIRef('https://w3id.org/linkml/double'), rdflib.term.URIRef('http://schema.org/Float')], 'decimal': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#decimal'), rdflib.term.URIRef('https://w3id.org/linkml/decimal'), rdflib.term.URIRef('http://schema.org/Number')], 'time': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#time'), rdflib.term.URIRef('https://w3id.org/linkml/time'), rdflib.term.URIRef('http://schema.org/Time')], 'date': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#date'), rdflib.term.URIRef('https://w3id.org/linkml/date'), rdflib.term.URIRef('http://schema.org/Date')], 'datetime': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#dateTime'), rdflib.term.URIRef('https://w3id.org/linkml/datetime'), rdflib.term.URIRef('http://schema.org/DateTime')], 'date_or_datetime': [rdflib.term.URIRef('https://w3id.org/linkml/DateOrDatetime'), rdflib.term.URIRef('https://w3id.org/linkml/date_or_datetime')], 'uriorcurie': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'), rdflib.term.URIRef('https://w3id.org/linkml/uriorcurie')], 'curie': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/curie')], 'uri': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'), rdflib.term.URIRef('https://w3id.org/linkml/uri'), rdflib.term.URIRef('http://schema.org/URL')], 'ncname': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/ncname')], 'objectidentifier': [rdflib.term.URIRef('http://www.w3.org/ns/shex#iri'), rdflib.term.URIRef('https://w3id.org/linkml/objectidentifier')], 'nodeidentifier': [rdflib.term.URIRef('http://www.w3.org/ns/shex#nonLiteral'), rdflib.term.URIRef('https://w3id.org/linkml/nodeidentifier')], 'jsonpointer': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/jsonpointer')], 'jsonpath': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/jsonpath')], 'sparqlpath': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/sparqlpath')], 'MinimalSubset': [], 'BasicSubset': [], 'SpecificationSubset': [], 'RelationalModelProfile': [], 'ObjectOrientedProfile': [], 'OwlProfile': []}), reverse_metamodel_mappings=defaultdict(, {rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#comment'): ['description', 'comments'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#subClassOf'): ['is_a', 'subclass_of'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#broader'): ['is_a'], rdflib.term.URIRef('http://schema.org/domainIncludes'): ['domain_of', 'domain_of'], rdflib.term.URIRef('https://schema.org/domainIncludes'): ['domain_of'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#domain'): ['domain_of'], rdflib.term.URIRef('http://schema.org/rangeIncludes'): ['range'], rdflib.term.URIRef('https://schema.org/rangeIncludes'): ['range'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#range'): ['range'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#sameAs'): ['exact_mappings'], rdflib.term.URIRef('http://schema.org/sameAs'): ['exact_mappings'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#Class'): ['ClassDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Class'): ['ClassDefinition', 'class_definition'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#Concept'): ['ClassDefinition', 'permissible_value'], rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#Property'): ['SlotDefinition', 'slot_definition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ObjectProperty'): ['SlotDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#DatatypeProperty'): ['SlotDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AnnotationProperty'): ['SlotDefinition'], rdflib.term.URIRef('https://w3id.org/linkml/Any'): ['AnyValue', 'Anything'], rdflib.term.URIRef('https://w3id.org/linkml/AnyValue'): ['AnyValue'], rdflib.term.URIRef('https://w3id.org/linkml/Extension'): ['extension', 'extension'], rdflib.term.URIRef('https://w3id.org/linkml/Extensible'): ['extensible', 'extensible'], rdflib.term.URIRef('https://w3id.org/linkml/Annotatable'): ['annotatable', 'annotatable'], rdflib.term.URIRef('https://w3id.org/linkml/Annotation'): ['annotation', 'annotation'], rdflib.term.URIRef('http://qudt.org/schema/qudt/Unit'): ['UnitOfMeasure'], rdflib.term.URIRef('https://w3id.org/linkml/UnitOfMeasure'): ['UnitOfMeasure'], rdflib.term.URIRef('https://w3id.org/linkml/Anything'): ['Anything'], rdflib.term.URIRef('https://w3id.org/linkml/CommonMetadata'): ['common_metadata', 'common_metadata'], rdflib.term.URIRef('https://w3id.org/linkml/Element'): ['element', 'element'], rdflib.term.URIRef('https://w3id.org/linkml/SchemaDefinition'): ['schema_definition', 'schema_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#ComponentSet'): ['schema_definition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Ontology'): ['schema_definition'], rdflib.term.URIRef('https://w3id.org/linkml/TypeExpression'): ['type_expression', 'type_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousTypeExpression'): ['anonymous_type_expression', 'anonymous_type_expression'], rdflib.term.URIRef('https://w3id.org/linkml/TypeDefinition'): ['type_definition', 'type_definition'], rdflib.term.URIRef('https://w3id.org/linkml/SubsetDefinition'): ['subset_definition', 'subset_definition'], rdflib.term.URIRef('https://w3id.org/linkml/Definition'): ['definition', 'definition'], rdflib.term.URIRef('https://w3id.org/linkml/EnumExpression'): ['enum_expression', 'enum_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousEnumExpression'): ['anonymous_enum_expression', 'anonymous_enum_expression'], rdflib.term.URIRef('https://w3id.org/linkml/EnumDefinition'): ['enum_definition', 'enum_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#HierarchicalCodeList'): ['enum_definition'], rdflib.term.URIRef('http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C113497'): ['enum_definition'], rdflib.term.URIRef('http://rdf.cdisc.org/mms#ValueDomain'): ['enum_definition'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#ConceptScheme'): ['enum_definition'], rdflib.term.URIRef('https://w3id.org/linkml/EnumBinding'): ['enum_binding', 'enum_binding'], rdflib.term.URIRef('https://w3id.org/linkml/MatchQuery'): ['match_query', 'match_query'], rdflib.term.URIRef('https://w3id.org/linkml/ReachabilityQuery'): ['reachability_query', 'reachability_query'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#Label'): ['structured_alias'], rdflib.term.URIRef('https://w3id.org/linkml/StructuredAlias'): ['structured_alias'], rdflib.term.URIRef('https://w3id.org/linkml/Expression'): ['expression', 'expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousExpression'): ['anonymous_expression', 'anonymous_expression'], rdflib.term.URIRef('https://w3id.org/linkml/PathExpression'): ['path_expression', 'path_expression'], rdflib.term.URIRef('https://w3id.org/linkml/SlotExpression'): ['slot_expression', 'slot_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousSlotExpression'): ['anonymous_slot_expression', 'anonymous_slot_expression'], rdflib.term.URIRef('https://w3id.org/linkml/SlotDefinition'): ['slot_definition', 'slot_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#ComponentProperty'): ['slot_definition'], rdflib.term.URIRef('https://w3id.org/linkml/ClassExpression'): ['class_expression', 'class_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousClassExpression'): ['anonymous_class_expression', 'anonymous_class_expression'], rdflib.term.URIRef('https://w3id.org/linkml/ClassDefinition'): ['class_definition', 'class_definition'], rdflib.term.URIRef('https://w3id.org/linkml/ClassLevelRule'): ['class_level_rule', 'class_level_rule'], rdflib.term.URIRef('https://w3id.org/linkml/ClassRule'): ['class_rule', 'class_rule'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#TripleRule'): ['class_rule'], rdflib.term.URIRef('http://www.w3.org/2003/11/swrl#Imp'): ['class_rule'], rdflib.term.URIRef('https://w3id.org/linkml/ArrayExpression'): ['array_expression', 'array_expression'], rdflib.term.URIRef('https://w3id.org/linkml/DimensionExpression'): ['dimension_expression', 'dimension_expression'], rdflib.term.URIRef('https://w3id.org/linkml/PatternExpression'): ['pattern_expression', 'pattern_expression'], rdflib.term.URIRef('https://w3id.org/linkml/ImportExpression'): ['import_expression', 'import_expression'], rdflib.term.URIRef('https://w3id.org/linkml/Setting'): ['setting', 'setting'], rdflib.term.URIRef('https://w3id.org/linkml/Prefix'): ['prefix', 'prefix'], rdflib.term.URIRef('https://w3id.org/linkml/LocalName'): ['local_name', 'local_name'], rdflib.term.URIRef('https://w3id.org/linkml/Example'): ['example', 'example'], rdflib.term.URIRef('https://w3id.org/linkml/AltDescription'): ['alt_description', 'alt_description'], rdflib.term.URIRef('https://w3id.org/linkml/PermissibleValue'): ['permissible_value', 'permissible_value'], rdflib.term.URIRef('https://w3id.org/linkml/UniqueKey'): ['unique_key', 'unique_key'], rdflib.term.URIRef('https://w3id.org/linkml/TypeMapping'): ['type_mapping', 'type_mapping'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#mappingRelation'): ['mappings'], rdflib.term.URIRef('https://w3id.org/linkml/mappings'): ['mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#exactMatch'): ['exact mappings'], rdflib.term.URIRef('https://w3id.org/linkml/exact_mappings'): ['exact mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#closeMatch'): ['close mappings'], rdflib.term.URIRef('https://w3id.org/linkml/close_mappings'): ['close mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#relatedMatch'): ['related mappings'], rdflib.term.URIRef('https://w3id.org/linkml/related_mappings'): ['related mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#narrowMatch'): ['narrow mappings'], rdflib.term.URIRef('https://w3id.org/linkml/narrow_mappings'): ['narrow mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#broadMatch'): ['broad mappings'], rdflib.term.URIRef('https://w3id.org/linkml/broad_mappings'): ['broad mappings'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated_element_has_exact_replacement'): ['deprecated element has exact replacement', 'deprecated element has exact replacement'], rdflib.term.URIRef('http://purl.obolibrary.org/obo/IAO_0100001'): ['deprecated element has exact replacement'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated_element_has_possible_replacement'): ['deprecated element has possible replacement', 'deprecated element has possible replacement'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#consider'): ['deprecated element has possible replacement'], rdflib.term.URIRef('https://w3id.org/linkml/extensions'): ['extensions', 'extensions'], rdflib.term.URIRef('https://w3id.org/linkml/extension_tag'): ['extension_tag', 'extension_tag'], rdflib.term.URIRef('https://w3id.org/linkml/extension_value'): ['extension_value', 'extension_value'], rdflib.term.URIRef('https://w3id.org/linkml/annotations'): ['annotations', 'annotations'], rdflib.term.URIRef('http://qudt.org/schema/qudt/unit'): ['unit'], rdflib.term.URIRef('https://w3id.org/linkml/unit'): ['unit'], rdflib.term.URIRef('http://qudt.org/schema/qudt/ucumCode'): ['ucum_code'], rdflib.term.URIRef('https://w3id.org/linkml/ucum_code'): ['ucum_code'], rdflib.term.URIRef('https://w3id.org/linkml/derivation'): ['derivation', 'derivation'], rdflib.term.URIRef('http://qudt.org/schema/qudt/hasQuantityKind'): ['has_quantity_kind'], rdflib.term.URIRef('https://w3id.org/linkml/has_quantity_kind'): ['has_quantity_kind'], rdflib.term.URIRef('http://qudt.org/schema/qudt/iec61360Code'): ['iec61360code'], rdflib.term.URIRef('https://w3id.org/linkml/iec61360code'): ['iec61360code'], rdflib.term.URIRef('http://qudt.org/schema/qudt/symbol'): ['symbol'], rdflib.term.URIRef('https://w3id.org/linkml/symbol'): ['symbol'], rdflib.term.URIRef('http://qudt.org/schema/qudt/abbreviation'): ['abbreviation'], rdflib.term.URIRef('https://w3id.org/linkml/abbreviation'): ['abbreviation'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#label'): ['descriptive_name', 'name'], rdflib.term.URIRef('https://w3id.org/linkml/descriptive_name'): ['descriptive_name'], rdflib.term.URIRef('https://w3id.org/linkml/name'): ['name'], rdflib.term.URIRef('http://schema.org/name'): ['name'], rdflib.term.URIRef('http://purl.org/dc/terms/title'): ['title'], rdflib.term.URIRef('https://w3id.org/linkml/title'): ['title'], rdflib.term.URIRef('http://purl.org/dc/terms/conformsTo'): ['conforms_to'], rdflib.term.URIRef('https://w3id.org/linkml/conforms_to'): ['conforms_to'], rdflib.term.URIRef('https://w3id.org/linkml/implements'): ['implements', 'implements'], rdflib.term.URIRef('https://w3id.org/linkml/instantiates'): ['instantiates', 'instantiates'], rdflib.term.URIRef('http://purl.org/dc/terms/subject'): ['categories'], rdflib.term.URIRef('https://w3id.org/linkml/categories'): ['categories'], rdflib.term.URIRef('http://schema.org/keywords'): ['keywords'], rdflib.term.URIRef('https://w3id.org/linkml/keywords'): ['keywords'], rdflib.term.URIRef('https://w3id.org/linkml/definition_uri'): ['definition_uri', 'definition_uri'], rdflib.term.URIRef('https://w3id.org/linkml/id_prefixes'): ['id_prefixes', 'id_prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/id_prefixes_are_closed'): ['id_prefixes_are_closed', 'id_prefixes_are_closed'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#definition'): ['description'], rdflib.term.URIRef('https://w3id.org/linkml/description'): ['description'], rdflib.term.URIRef('http://purl.org/dc/terms/description'): ['description'], rdflib.term.URIRef('http://schema.org/description'): ['description'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#altLabel'): ['structured_aliases'], rdflib.term.URIRef('https://w3id.org/linkml/structured_aliases'): ['structured_aliases'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#altLabel'): ['aliases', 'singular_name', 'local_name_value'], rdflib.term.URIRef('https://w3id.org/linkml/aliases'): ['aliases'], rdflib.term.URIRef('http://schema.org/alternateName'): ['aliases'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated'): ['deprecated', 'deprecated'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#deprecated'): ['deprecated'], rdflib.term.URIRef('https://w3id.org/linkml/todos'): ['todos', 'todos'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#editorialNote'): ['notes'], rdflib.term.URIRef('https://w3id.org/linkml/notes'): ['notes'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#note'): ['comments'], rdflib.term.URIRef('https://w3id.org/linkml/comments'): ['comments'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#inSubset'): ['in_subset'], rdflib.term.URIRef('https://w3id.org/linkml/in_subset'): ['in_subset'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#inScheme'): ['from_schema'], rdflib.term.URIRef('https://w3id.org/linkml/from_schema'): ['from_schema'], rdflib.term.URIRef('https://w3id.org/linkml/imported_from'): ['imported_from', 'imported_from'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#seeAlso'): ['see_also'], rdflib.term.URIRef('https://w3id.org/linkml/see_also'): ['see_also'], rdflib.term.URIRef('https://w3id.org/linkml/owned_by'): ['owned_by', 'owned_by'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#isDefinedBy'): ['owned_by'], rdflib.term.URIRef('http://purl.org/pav/createdBy'): ['created_by'], rdflib.term.URIRef('https://w3id.org/linkml/created_by'): ['created_by'], rdflib.term.URIRef('http://purl.org/dc/terms/contributor'): ['contributors'], rdflib.term.URIRef('https://w3id.org/linkml/contributors'): ['contributors'], rdflib.term.URIRef('http://purl.org/pav/createdOn'): ['created_on'], rdflib.term.URIRef('https://w3id.org/linkml/created_on'): ['created_on'], rdflib.term.URIRef('http://purl.org/pav/lastUpdatedOn'): ['last_updated_on'], rdflib.term.URIRef('https://w3id.org/linkml/last_updated_on'): ['last_updated_on'], rdflib.term.URIRef('http://open-services.net/ns/core#modifiedBy'): ['modified_by'], rdflib.term.URIRef('https://w3id.org/linkml/modified_by'): ['modified_by'], rdflib.term.URIRef('http://purl.org/ontology/bibo/status'): ['status'], rdflib.term.URIRef('https://w3id.org/linkml/status'): ['status'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#literalForm'): ['literal_form'], rdflib.term.URIRef('https://w3id.org/linkml/literal_form'): ['literal_form'], rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate'): ['alias_predicate'], rdflib.term.URIRef('https://w3id.org/linkml/alias_predicate'): ['alias_predicate'], rdflib.term.URIRef('https://w3id.org/linkml/alias_contexts'): ['alias_contexts', 'alias_contexts'], rdflib.term.URIRef('http://schema.org/inLanguage'): ['in_language'], rdflib.term.URIRef('https://w3id.org/linkml/in_language'): ['in_language'], rdflib.term.URIRef('http://purl.org/dc/terms/source'): ['source'], rdflib.term.URIRef('https://w3id.org/linkml/source'): ['source'], rdflib.term.URIRef('http://www.w3.org/ns/prov#wasDerivedFrom'): ['source'], rdflib.term.URIRef('http://schema.org/isBasedOn'): ['source'], rdflib.term.URIRef('http://purl.org/dc/terms/publisher'): ['publisher'], rdflib.term.URIRef('https://w3id.org/linkml/publisher'): ['publisher'], rdflib.term.URIRef('https://w3id.org/linkml/is_a'): ['is_a', 'is_a'], rdflib.term.URIRef('https://w3id.org/linkml/abstract'): ['abstract', 'abstract'], rdflib.term.URIRef('https://w3id.org/linkml/mixin'): ['mixin', 'mixin'], rdflib.term.URIRef('https://w3id.org/linkml/mixins'): ['mixins', 'mixins'], rdflib.term.URIRef('https://w3id.org/linkml/apply_to'): ['apply_to', 'apply_to'], rdflib.term.URIRef('https://w3id.org/linkml/values_from'): ['values_from', 'values_from'], rdflib.term.URIRef('https://w3id.org/linkml/code_set'): ['code_set', 'code_set'], rdflib.term.URIRef('https://w3id.org/linkml/code_set_version'): ['code_set_version', 'code_set_version'], rdflib.term.URIRef('https://w3id.org/linkml/code_set_tag'): ['code_set_tag', 'code_set_tag'], rdflib.term.URIRef('https://w3id.org/linkml/pv_formula'): ['pv_formula', 'pv_formula'], rdflib.term.URIRef('https://w3id.org/linkml/permissible_values'): ['permissible_values', 'permissible_values'], rdflib.term.URIRef('http://rdf.cdisc.org/mms#PermissibleValue'): ['permissible_values'], rdflib.term.URIRef('https://w3id.org/linkml/enum_uri'): ['enum_uri', 'enum_uri'], rdflib.term.URIRef('https://w3id.org/linkml/include'): ['include', 'include'], rdflib.term.URIRef('https://w3id.org/linkml/minus'): ['minus', 'minus'], rdflib.term.URIRef('https://w3id.org/linkml/inherits'): ['inherits', 'inherits'], rdflib.term.URIRef('https://w3id.org/linkml/matches'): ['matches', 'matches'], rdflib.term.URIRef('https://w3id.org/linkml/identifier_pattern'): ['identifier_pattern', 'identifier_pattern'], rdflib.term.URIRef('https://w3id.org/linkml/concepts'): ['concepts', 'concepts'], rdflib.term.URIRef('https://w3id.org/linkml/reachable_from'): ['reachable_from', 'reachable_from'], rdflib.term.URIRef('https://w3id.org/linkml/source_ontology'): ['source_ontology', 'source_ontology'], rdflib.term.URIRef('https://w3id.org/linkml/is_direct'): ['is_direct', 'is_direct'], rdflib.term.URIRef('https://w3id.org/linkml/traverse_up'): ['traverse_up', 'traverse_up'], rdflib.term.URIRef('https://w3id.org/linkml/include_self'): ['include_self', 'include_self'], rdflib.term.URIRef('https://w3id.org/linkml/relationship_types'): ['relationship_types', 'relationship_types'], rdflib.term.URIRef('https://w3id.org/linkml/source_nodes'): ['source_nodes', 'source_nodes'], rdflib.term.URIRef('https://w3id.org/linkml/text'): ['text', 'text'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#notation'): ['text'], rdflib.term.URIRef('https://w3id.org/linkml/meaning'): ['meaning', 'meaning'], rdflib.term.URIRef('https://w3id.org/linkml/id'): ['id', 'id'], rdflib.term.URIRef('https://w3id.org/linkml/emit_prefixes'): ['emit_prefixes', 'emit_prefixes'], rdflib.term.URIRef('http://purl.org/pav/version'): ['version'], rdflib.term.URIRef('https://w3id.org/linkml/version'): ['version'], rdflib.term.URIRef('http://schema.org/schemaVersion'): ['version'], rdflib.term.URIRef('https://w3id.org/linkml/imports'): ['imports', 'imports'], rdflib.term.URIRef('https://w3id.org/linkml/structured_imports'): ['structured_imports', 'structured_imports'], rdflib.term.URIRef('http://purl.org/dc/terms/license'): ['license'], rdflib.term.URIRef('https://w3id.org/linkml/license'): ['license'], rdflib.term.URIRef('https://w3id.org/linkml/default_curi_maps'): ['default_curi_maps', 'default_curi_maps'], rdflib.term.URIRef('https://w3id.org/linkml/default_prefix'): ['default_prefix', 'default_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/default_range'): ['default_range', 'default_range'], rdflib.term.URIRef('https://w3id.org/linkml/subsets'): ['subsets', 'subsets'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#hasSubset'): ['subsets'], rdflib.term.URIRef('https://w3id.org/linkml/types'): ['types', 'types'], rdflib.term.URIRef('https://w3id.org/linkml/enums'): ['enums', 'enums'], rdflib.term.URIRef('https://w3id.org/linkml/slot_definitions'): ['slot_definitions', 'slot_definitions'], rdflib.term.URIRef('https://w3id.org/linkml/classes'): ['classes', 'classes'], rdflib.term.URIRef('https://w3id.org/linkml/metamodel_version'): ['metamodel_version', 'metamodel_version'], rdflib.term.URIRef('https://w3id.org/linkml/source_file'): ['source_file', 'source_file'], rdflib.term.URIRef('https://w3id.org/linkml/source_file_date'): ['source_file_date', 'source_file_date'], rdflib.term.URIRef('https://w3id.org/linkml/source_file_size'): ['source_file_size', 'source_file_size'], rdflib.term.URIRef('https://w3id.org/linkml/generation_date'): ['generation_date', 'generation_date'], rdflib.term.URIRef('https://w3id.org/linkml/slots'): ['slots', 'slots'], rdflib.term.URIRef('https://w3id.org/linkml/slot_usage'): ['slot_usage', 'slot_usage'], rdflib.term.URIRef('https://w3id.org/linkml/enum_range'): ['enum_range', 'enum_range'], rdflib.term.URIRef('https://w3id.org/linkml/range_expression'): ['range_expression', 'range_expression'], rdflib.term.URIRef('https://w3id.org/linkml/boolean_slot'): ['boolean_slot', 'boolean_slot'], rdflib.term.URIRef('https://w3id.org/linkml/any_of'): ['any_of', 'any_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#or'): ['any_of'], rdflib.term.URIRef('https://w3id.org/linkml/exactly_one_of'): ['exactly_one_of', 'exactly_one_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#xone'): ['exactly_one_of'], rdflib.term.URIRef('https://w3id.org/linkml/none_of'): ['none_of', 'none_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#not'): ['none_of'], rdflib.term.URIRef('https://w3id.org/linkml/all_of'): ['all_of', 'all_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#and'): ['all_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#condition'): ['preconditions'], rdflib.term.URIRef('https://w3id.org/linkml/preconditions'): ['preconditions'], rdflib.term.URIRef('http://www.w3.org/2003/11/swrl#body'): ['preconditions', 'postconditions'], rdflib.term.URIRef('https://w3id.org/linkml/postconditions'): ['postconditions', 'postconditions'], rdflib.term.URIRef('https://w3id.org/linkml/elseconditions'): ['elseconditions', 'elseconditions'], rdflib.term.URIRef('https://w3id.org/linkml/bidirectional'): ['bidirectional', 'bidirectional'], rdflib.term.URIRef('https://w3id.org/linkml/open_world'): ['open_world', 'open_world'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#order'): ['rank'], rdflib.term.URIRef('https://w3id.org/linkml/rank'): ['rank'], rdflib.term.URIRef('http://qudt.org/schema/qudt/order'): ['rank'], rdflib.term.URIRef('http://purl.org/linked-data/cube#order'): ['rank'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#deactivated'): ['deactivated'], rdflib.term.URIRef('https://w3id.org/linkml/deactivated'): ['deactivated'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#rule'): ['rules'], rdflib.term.URIRef('https://w3id.org/linkml/rules'): ['rules'], rdflib.term.URIRef('https://w3id.org/linkml/classification_rules'): ['classification_rules', 'classification_rules'], rdflib.term.URIRef('https://w3id.org/linkml/slot_conditions'): ['slot_conditions', 'slot_conditions'], rdflib.term.URIRef('https://w3id.org/linkml/attributes'): ['attributes', 'attributes'], rdflib.term.URIRef('https://w3id.org/linkml/class_uri'): ['class_uri', 'class_uri'], rdflib.term.URIRef('https://w3id.org/linkml/subclass_of'): ['subclass_of', 'subclass_of'], rdflib.term.URIRef('https://w3id.org/linkml/defining_slots'): ['defining_slots', 'defining_slots'], rdflib.term.URIRef('https://w3id.org/linkml/union_of'): ['union_of', 'union_of'], rdflib.term.URIRef('https://w3id.org/linkml/tree_root'): ['tree_root', 'tree_root'], rdflib.term.URIRef('https://w3id.org/linkml/unique_keys'): ['unique_keys', 'unique_keys'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#hasKey'): ['unique_keys'], rdflib.term.URIRef('https://w3id.org/linkml/unique_key_name'): ['unique_key_name', 'unique_key_name'], rdflib.term.URIRef('https://w3id.org/linkml/consider_nulls_inequal'): ['consider_nulls_inequal', 'consider_nulls_inequal'], rdflib.term.URIRef('https://w3id.org/linkml/unique_key_slots'): ['unique_key_slots', 'unique_key_slots'], rdflib.term.URIRef('https://w3id.org/linkml/slot_names_unique'): ['slot_names_unique', 'slot_names_unique'], rdflib.term.URIRef('https://w3id.org/linkml/domain'): ['domain', 'domain'], rdflib.term.URIRef('https://w3id.org/linkml/range'): ['range', 'range'], rdflib.term.URIRef('https://w3id.org/linkml/slot_uri'): ['slot_uri', 'slot_uri'], rdflib.term.URIRef('https://w3id.org/linkml/multivalued'): ['multivalued', 'multivalued'], rdflib.term.URIRef('https://w3id.org/linkml/array'): ['array', 'array'], rdflib.term.URIRef('https://w3id.org/linkml/dimensions'): ['dimensions', 'dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_number_dimensions'): ['minimum_number_dimensions', 'minimum_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_number_dimensions'): ['maximum_number_dimensions', 'maximum_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/exact_number_dimensions'): ['exact_number_dimensions', 'exact_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/inherited'): ['inherited', 'inherited'], rdflib.term.URIRef('https://w3id.org/linkml/readonly'): ['readonly', 'readonly'], rdflib.term.URIRef('https://w3id.org/linkml/ifabsent'): ['ifabsent', 'ifabsent'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#defaultValue'): ['ifabsent'], rdflib.term.URIRef('https://w3id.org/linkml/implicit_prefix'): ['implicit_prefix', 'implicit_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/value_specification_constant'): ['value_specification_constant', 'value_specification_constant'], rdflib.term.URIRef('https://w3id.org/linkml/list_value_specification_constant'): ['list_value_specification_constant', 'list_value_specification_constant'], rdflib.term.URIRef('https://w3id.org/linkml/value_presence'): ['value_presence', 'value_presence'], rdflib.term.URIRef('https://w3id.org/linkml/equals_string'): ['equals_string', 'equals_string'], rdflib.term.URIRef('https://w3id.org/linkml/equals_number'): ['equals_number', 'equals_number'], rdflib.term.URIRef('https://w3id.org/linkml/equals_expression'): ['equals_expression', 'equals_expression'], rdflib.term.URIRef('https://w3id.org/linkml/exact_cardinality'): ['exact_cardinality', 'exact_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_cardinality'): ['minimum_cardinality', 'minimum_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_cardinality'): ['maximum_cardinality', 'maximum_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/equals_string_in'): ['equals_string_in', 'equals_string_in'], rdflib.term.URIRef('https://w3id.org/linkml/equals_number_in'): ['equals_number_in', 'equals_number_in'], rdflib.term.URIRef('https://w3id.org/linkml/has_member'): ['has_member', 'has_member'], rdflib.term.URIRef('https://w3id.org/linkml/all_members'): ['all_members', 'all_members'], rdflib.term.URIRef('https://w3id.org/linkml/singular_name'): ['singular_name', 'singular_name'], rdflib.term.URIRef('https://w3id.org/linkml/required'): ['required', 'required'], rdflib.term.URIRef('https://w3id.org/linkml/recommended'): ['recommended', 'recommended'], rdflib.term.URIRef('https://w3id.org/linkml/inapplicable'): ['inapplicable', 'inapplicable'], rdflib.term.URIRef('https://w3id.org/linkml/inlined'): ['inlined', 'inlined'], rdflib.term.URIRef('https://w3id.org/linkml/inlined_as_list'): ['inlined_as_list', 'inlined_as_list'], rdflib.term.URIRef('https://w3id.org/linkml/inlined_as_simple_dict'): ['inlined_as_simple_dict', 'inlined_as_simple_dict'], rdflib.term.URIRef('https://w3id.org/linkml/list_elements_ordered'): ['list_elements_ordered', 'list_elements_ordered'], rdflib.term.URIRef('https://w3id.org/linkml/list_elements_unique'): ['list_elements_unique', 'list_elements_unique'], rdflib.term.URIRef('https://w3id.org/linkml/shared'): ['shared', 'shared'], rdflib.term.URIRef('https://w3id.org/linkml/key'): ['key', 'key'], rdflib.term.URIRef('https://w3id.org/linkml/identifier'): ['identifier', 'identifier'], rdflib.term.URIRef('https://w3id.org/linkml/designates_type'): ['designates_type', 'designates_type'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#prefLabel'): ['alias'], rdflib.term.URIRef('https://w3id.org/linkml/alias'): ['alias'], rdflib.term.URIRef('https://w3id.org/linkml/owner'): ['owner', 'owner'], rdflib.term.URIRef('https://w3id.org/linkml/domain_of'): ['domain_of', 'domain_of'], rdflib.term.URIRef('http://semanticscience.org/resource/SIO_000011'): ['domain_of'], rdflib.term.URIRef('https://w3id.org/linkml/is_usage_slot'): ['is_usage_slot', 'is_usage_slot'], rdflib.term.URIRef('https://w3id.org/linkml/usage_slot_name'): ['usage_slot_name', 'usage_slot_name'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#subPropertyOf'): ['subproperty_of'], rdflib.term.URIRef('https://w3id.org/linkml/subproperty_of'): ['subproperty_of'], rdflib.term.URIRef('https://w3id.org/linkml/disjoint_with'): ['disjoint_with', 'disjoint_with'], rdflib.term.URIRef('https://w3id.org/linkml/children_are_mutually_disjoint'): ['children_are_mutually_disjoint', 'children_are_mutually_disjoint'], rdflib.term.URIRef('https://w3id.org/linkml/relational_logical_characteristic'): ['relational_logical_characteristic', 'relational_logical_characteristic'], rdflib.term.URIRef('https://w3id.org/linkml/symmetric'): ['symmetric', 'symmetric'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#SymmetricProperty'): ['symmetric'], rdflib.term.URIRef('https://w3id.org/linkml/asymmetric'): ['asymmetric', 'asymmetric'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AsymmetricProperty'): ['asymmetric'], rdflib.term.URIRef('https://w3id.org/linkml/reflexive'): ['reflexive', 'reflexive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ReflexiveProperty'): ['reflexive'], rdflib.term.URIRef('https://w3id.org/linkml/irreflexive'): ['irreflexive', 'irreflexive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#IrreflexiveProperty'): ['irreflexive'], rdflib.term.URIRef('https://w3id.org/linkml/locally_reflexive'): ['locally_reflexive', 'locally_reflexive'], rdflib.term.URIRef('https://w3id.org/linkml/transitive'): ['transitive', 'transitive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#TransitiveProperty'): ['transitive'], rdflib.term.URIRef('https://w3id.org/linkml/transitive_form_of'): ['transitive_form_of', 'transitive_form_of'], rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of'): ['reflexive_transitive_form_of', 'reflexive_transitive_form_of'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#inverseOf'): ['inverse'], rdflib.term.URIRef('https://w3id.org/linkml/inverse'): ['inverse'], rdflib.term.URIRef('https://w3id.org/linkml/is_class_field'): ['is_class_field', 'is_class_field'], rdflib.term.URIRef('https://w3id.org/linkml/role'): ['role', 'role'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_value'): ['minimum_value', 'minimum_value'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_value'): ['maximum_value', 'maximum_value'], rdflib.term.URIRef('https://w3id.org/linkml/interpolated'): ['interpolated', 'interpolated'], rdflib.term.URIRef('https://w3id.org/linkml/partial_match'): ['partial_match', 'partial_match'], rdflib.term.URIRef('https://w3id.org/linkml/pattern'): ['pattern', 'pattern'], rdflib.term.URIRef('https://w3id.org/linkml/syntax'): ['syntax', 'syntax'], rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern'): ['structured_pattern', 'structured_pattern'], rdflib.term.URIRef('https://w3id.org/linkml/string_serialization'): ['string_serialization', 'string_serialization'], rdflib.term.URIRef('https://w3id.org/linkml/bindings'): ['bindings', 'bindings'], rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of'): ['binds_value_of', 'binds_value_of'], rdflib.term.URIRef('https://w3id.org/linkml/obligation_level'): ['obligation_level', 'obligation_level'], rdflib.term.URIRef('https://w3id.org/linkml/type_mappings'): ['type_mappings', 'type_mappings'], rdflib.term.URIRef('https://w3id.org/linkml/framework_key'): ['framework_key', 'framework_key'], rdflib.term.URIRef('https://w3id.org/linkml/mapped_type'): ['mapped_type', 'mapped_type'], rdflib.term.URIRef('https://w3id.org/linkml/typeof'): ['typeof', 'typeof'], rdflib.term.URIRef('https://w3id.org/linkml/base'): ['base', 'base'], rdflib.term.URIRef('https://w3id.org/linkml/type_uri'): ['type_uri', 'type_uri'], rdflib.term.URIRef('https://w3id.org/linkml/repr'): ['repr', 'repr'], rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text'): ['alt_description_text', 'alt_description_text'], rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source'): ['alt_description_source', 'alt_description_source'], rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions'): ['alt_descriptions', 'alt_descriptions'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#example'): ['value'], rdflib.term.URIRef('https://w3id.org/linkml/value'): ['value'], rdflib.term.URIRef('https://w3id.org/linkml/value_description'): ['value_description', 'value_description'], rdflib.term.URIRef('https://w3id.org/linkml/value_object'): ['value_object', 'value_object'], rdflib.term.URIRef('https://w3id.org/linkml/examples'): ['examples', 'examples'], rdflib.term.URIRef('https://vocab.org/vann/example'): ['examples'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#prefix'): ['prefix_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/prefix_prefix'): ['prefix_prefix'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#namespace'): ['prefix_reference'], rdflib.term.URIRef('https://w3id.org/linkml/prefix_reference'): ['prefix_reference'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#declare'): ['prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/prefixes'): ['prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/setting_key'): ['setting_key', 'setting_key'], rdflib.term.URIRef('https://w3id.org/linkml/setting_value'): ['setting_value', 'setting_value'], rdflib.term.URIRef('https://w3id.org/linkml/settings'): ['settings', 'settings'], rdflib.term.URIRef('https://w3id.org/linkml/import_from'): ['import_from', 'import_from'], rdflib.term.URIRef('https://w3id.org/linkml/import_as'): ['import_as', 'import_as'], rdflib.term.URIRef('https://w3id.org/linkml/import_map'): ['import_map', 'import_map'], rdflib.term.URIRef('https://w3id.org/linkml/local_name_source'): ['local_name_source', 'local_name_source'], rdflib.term.URIRef('https://w3id.org/linkml/local_name_value'): ['local_name_value'], rdflib.term.URIRef('https://w3id.org/linkml/local_names'): ['local_names', 'local_names'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#group'): ['slot_group'], rdflib.term.URIRef('https://w3id.org/linkml/slot_group'): ['slot_group'], rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'): ['is_grouping_slot', 'is_grouping_slot'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#PropertyGroup'): ['is_grouping_slot'], rdflib.term.URIRef('https://w3id.org/linkml/followed_by'): ['followed_by', 'followed_by'], rdflib.term.URIRef('https://w3id.org/linkml/reversed'): ['reversed', 'reversed'], rdflib.term.URIRef('https://w3id.org/linkml/traverse'): ['traverse', 'traverse'], rdflib.term.URIRef('https://w3id.org/linkml/path_rule'): ['path_rule', 'path_rule'], rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship'): ['represents_relationship', 'represents_relationship'], rdflib.term.URIRef('https://w3id.org/linkml/relational_role'): ['relational_role', 'relational_role'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'): ['string', 'curie', 'ncname', 'jsonpointer', 'jsonpath', 'sparqlpath'], rdflib.term.URIRef('https://w3id.org/linkml/string'): ['string'], rdflib.term.URIRef('http://schema.org/Text'): ['string'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#integer'): ['integer'], rdflib.term.URIRef('https://w3id.org/linkml/integer'): ['integer'], rdflib.term.URIRef('http://schema.org/Integer'): ['integer'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#boolean'): ['boolean'], rdflib.term.URIRef('https://w3id.org/linkml/boolean'): ['boolean'], rdflib.term.URIRef('http://schema.org/Boolean'): ['boolean'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#float'): ['float'], rdflib.term.URIRef('https://w3id.org/linkml/float'): ['float'], rdflib.term.URIRef('http://schema.org/Float'): ['float', 'double'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#double'): ['double'], rdflib.term.URIRef('https://w3id.org/linkml/double'): ['double'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#decimal'): ['decimal'], rdflib.term.URIRef('https://w3id.org/linkml/decimal'): ['decimal'], rdflib.term.URIRef('http://schema.org/Number'): ['decimal'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#time'): ['time'], rdflib.term.URIRef('https://w3id.org/linkml/time'): ['time'], rdflib.term.URIRef('http://schema.org/Time'): ['time'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#date'): ['date'], rdflib.term.URIRef('https://w3id.org/linkml/date'): ['date'], rdflib.term.URIRef('http://schema.org/Date'): ['date'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#dateTime'): ['datetime'], rdflib.term.URIRef('https://w3id.org/linkml/datetime'): ['datetime'], rdflib.term.URIRef('http://schema.org/DateTime'): ['datetime'], rdflib.term.URIRef('https://w3id.org/linkml/DateOrDatetime'): ['date_or_datetime'], rdflib.term.URIRef('https://w3id.org/linkml/date_or_datetime'): ['date_or_datetime'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'): ['uriorcurie', 'uri'], rdflib.term.URIRef('https://w3id.org/linkml/uriorcurie'): ['uriorcurie'], rdflib.term.URIRef('https://w3id.org/linkml/curie'): ['curie'], rdflib.term.URIRef('https://w3id.org/linkml/uri'): ['uri'], rdflib.term.URIRef('http://schema.org/URL'): ['uri'], rdflib.term.URIRef('https://w3id.org/linkml/ncname'): ['ncname'], rdflib.term.URIRef('http://www.w3.org/ns/shex#iri'): ['objectidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/objectidentifier'): ['objectidentifier'], rdflib.term.URIRef('http://www.w3.org/ns/shex#nonLiteral'): ['nodeidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/nodeidentifier'): ['nodeidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/jsonpointer'): ['jsonpointer'], rdflib.term.URIRef('https://w3id.org/linkml/jsonpath'): ['jsonpath'], rdflib.term.URIRef('https://w3id.org/linkml/sparqlpath'): ['sparqlpath']}), classdef_slots={'modified_by', 'none_of', 'name', 'rules', 'represents_relationship', 'source', 'slots', 'annotations', 'structured_aliases', 'slot_names_unique', 'tree_root', 'classification_rules', 'slot_conditions', 'id_prefixes_are_closed', 'created_on', 'in_language', 'is_a', 'related mappings', 'status', 'from_schema', 'in_subset', 'children_are_mutually_disjoint', 'todos', 'conforms_to', 'alt_descriptions', 'attributes', 'deprecated element has possible replacement', 'exactly_one_of', 'narrow mappings', 'local_names', 'string_serialization', 'imported_from', 'instantiates', 'apply_to', 'class_uri', 'description', 'values_from', 'deprecated', 'comments', 'subclass_of', 'any_of', 'mixins', 'disjoint_with', 'slot_usage', 'union_of', 'defining_slots', 'unique_keys', 'notes', 'created_by', 'keywords', 'last_updated_on', 'close mappings', 'abstract', 'categories', 'mappings', 'exact mappings', 'deprecated element has exact replacement', 'all_of', 'aliases', 'mixin', 'contributors', 'id_prefixes', 'definition_uri', 'examples', 'title', 'implements', 'extensions', 'broad mappings', 'see_also', 'rank'}, slotdef_slots={'range_expression', 'source', 'enum_range', 'reflexive', 'is_grouping_slot', 'from_schema', 'in_subset', 'multivalued', 'transitive_form_of', 'recommended', 'deprecated element has possible replacement', 'local_names', 'instantiates', 'unit', 'array', 'values_from', 'equals_string_in', 'mixins', 'notes', 'pattern', 'slot_group', 'usage_slot_name', 'all_members', 'definition_uri', 'implicit_prefix', 'identifier', 'has_member', 'created_on', 'readonly', 'in_language', 'is_a', 'bindings', 'asymmetric', 'maximum_cardinality', 'string_serialization', 'apply_to', 'path_rule', 'domain', 'ifabsent', 'any_of', 'reflexive_transitive_form_of', 'disjoint_with', 'relational_role', 'union_of', 'created_by', 'keywords', 'list_elements_unique', 'deprecated element has exact replacement', 'all_of', 'implements', 'extensions', 'mappings', 'role', 'rank', 'none_of', 'list_elements_ordered', 'inlined_as_list', 'owner', 'structured_aliases', 'inverse', 'structured_pattern', 'minimum_value', 'status', 'designates_type', 'type_mappings', 'equals_expression', 'is_usage_slot', 'children_are_mutually_disjoint', 'irreflexive', 'alt_descriptions', 'imported_from', 'domain_of', 'description', 'alias', 'locally_reflexive', 'range', 'singular_name', 'shared', 'close mappings', 'abstract', 'categories', 'inlined', 'mixin', 'examples', 'inherited', 'symmetric', 'broad mappings', 'slot_uri', 'see_also', 'equals_number', 'required', 'modified_by', 'name', 'annotations', 'id_prefixes_are_closed', 'related mappings', 'equals_string', 'transitive', 'maximum_value', 'todos', 'conforms_to', 'exactly_one_of', 'narrow mappings', 'value_presence', 'deprecated', 'comments', 'last_updated_on', 'exact mappings', 'aliases', 'is_class_field', 'contributors', 'id_prefixes', 'title', 'minimum_cardinality', 'key', 'subproperty_of', 'exact_cardinality'}, seen_prefixes=set(), prefix_counts=Counter())' + +.venv/lib/python3.9/site-packages/rdflib/parser.py:383: Exception +=============================== warnings summary =============================== +.venv/lib/python3.9/site-packages/pysolr.py:14 + /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pysolr.py:14: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html + from pkg_resources import DistributionNotFound, get_distribution, parse_version + +.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144 +.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144 + /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('sphinxcontrib')`. + Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages + declare_namespace(pkg) + +.venv/lib/python3.9/site-packages/quantulum3/classifier.py:28 + /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/quantulum3/classifier.py:28: UserWarning: Classifier dependencies not installed. Run pip install quantulum3[classifier] to install them. The classifer helps to dissambiguate units. + warnings.warn( + +.venv/lib/python3.9/site-packages/pydantic/main.py:1132: 1771 warnings + /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pydantic/main.py:1132: PydanticDeprecatedSince20: The `parse_obj` method is deprecated; use `model_validate` instead. Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.8/migration/ + warnings.warn( + +.venv/lib/python3.9/site-packages/pydantic/main.py:1087: 7084 warnings + /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pydantic/main.py:1087: PydanticDeprecatedSince20: The `dict` method is deprecated; use `model_dump` instead. Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.8/migration/ + warnings.warn('The `dict` method is deprecated; use `model_dump` instead.', category=PydanticDeprecatedSince20) + +tests/test_annotators/test_schema_enricher.py::SchemaEnricherTestCase::test_enrich + /home/corey/Code/schema-automator/tests/test_annotators/test_schema_enricher.py:26: DeprecatedWarning: get_implementation_from_shorthand is deprecated as of Use get_adapter instead. + impl = get_implementation_from_shorthand(os.path.join(INPUT_DIR, "so-mini.obo")) + +tests/test_generalizers/test_from_robot_template.py::TestRobotTemplateImport::test_from_robot_template + /home/corey/Code/schema-automator/tests/test_generalizers/test_from_robot_template.py:30: DeprecationWarning: Call to deprecated method all_class. (Use `all_classes` instead) + for cn, c in sv.all_class().items(): + +tests/test_importers/test_dosdp_importer.py::TestDOSDPImporter::test_dosdp_import + /home/corey/Code/schema-automator/tests/test_importers/test_dosdp_importer.py:43: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) + sd = minify_schema(schema) + +tests/test_importers/test_dosdp_importer.py: 1667 warnings + /home/corey/Code/schema-automator/schema_automator/utils/schemautils.py:44: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) + minify_schema(v) + +tests/test_importers/test_dosdp_importer.py: 503 warnings + /home/corey/Code/schema-automator/schema_automator/utils/schemautils.py:47: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) + minify_schema(v) + +-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html +=========================== short test summary info ============================ +FAILED tests/test_importers/test_rdfs_importer.py::test_infer_prefix - Except... +=========== 1 failed, 37 passed, 6 skipped, 11032 warnings in 26.42s =========== diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index c5f7581..364b61b 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -3,6 +3,7 @@ from typing import Any, Dict, Iterable, List, Mapping, Optional, TextIO, Union import typing from collections import defaultdict, Counter +import warnings from jsonasobj2 import JsonObj from linkml.utils.schema_builder import SchemaBuilder @@ -96,6 +97,7 @@ def __post_init__(self): self.slotdef_slots = {s.name for s in sv.class_induced_slots(SlotDefinition.class_name)} def convert( + self, file: Union[str, Path, TextIO], name: Optional[str] = None, format: Optional[str] = "turtle", @@ -129,7 +131,10 @@ def convert( cls_slots = defaultdict(list) for slot in self.generate_rdfs_properties(g, cls_slots): - sb.add_slot(slot) + if slot.name in sb.schema.slots: + warnings.warn(f"Slot '{slot.name}' already exists in schema; skipping duplicate.") + else: + sb.add_slot(slot) for cls in self.process_rdfs_classes(g, cls_slots): sb.add_class(cls) @@ -150,6 +155,7 @@ def convert( schema.prefixes = {key: value for key, value in schema.prefixes.items() if key in self.seen_prefixes} self.infer_metadata(schema, name, default_prefix, model_uri) self.fix_missing(schema) + self._normalize_slot_ranges(schema) return schema def infer_metadata( @@ -346,3 +352,25 @@ def _as_name(self, v: URIRef) -> str: if sep in v_str: return v_str.split(sep)[-1] return v_str + + def _normalize_slot_ranges(self, schema: SchemaDefinition) -> None: + """ + Normalize slot ranges to valid LinkML scalars where needed. + Currently supports remapping RDF types like 'langString'. + """ + RDF_DATATYPE_MAP = { + "langString": "string", + "Text": "string", + "Thing": "string", + "landingPage": "string", + "Boolean": "boolean", + "Number": "integer", + "URL": "uri", + } + + for slot in schema.slots.values(): + if slot.range in RDF_DATATYPE_MAP: + warnings.warn( + f"Slot '{slot.name}' has unsupported range '{slot.range}'; mapping to '{RDF_DATATYPE_MAP[slot.range]}'." + ) + slot.range = RDF_DATATYPE_MAP[slot.range] diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index e539ce9..7f8d534 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -5,6 +5,7 @@ from io import StringIO import unittest import os +import pytest import yaml from linkml_runtime import SchemaView @@ -80,6 +81,6 @@ def test_from_rdfs(): assert activity.name == "Activity" assert activity.is_a == "CreativeWork" slots = sv.class_induced_slots(activity.name) - assert len(slots) == 1 - slot = slots[0] - assert slot.name == "id" + assert len(slots) == 18 + slot_names = [s.name for s in slots] + assert "messages" in slot_names From b5878beeab4ad5dd6ed6d2fce470c9f5cb4dd027 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Tue, 13 May 2025 11:22:45 -0500 Subject: [PATCH 62/88] Exclude Windows for now --- .github/workflows/check-pull-request.yaml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index 91f9377..dcacef0 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -16,7 +16,8 @@ jobs: strategy: fail-fast: false matrix: - os: [ ubuntu-latest, windows-latest ] + # os: [ ubuntu-latest, windows-latest ] - Exclude windows for now + os: [ ubuntu-latest ] python-version: [ "3.9", "3.10" ] exclude: - os: windows-latest From ac1b76f12f120fed2c0e513938303f647834c819 Mon Sep 17 00:00:00 2001 From: Corey Cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Tue, 13 May 2025 11:28:46 -0500 Subject: [PATCH 63/88] Apply suggestions from code review Adding Co-pilots nit-pick suggestions.. they seem reasonable Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com> --- schema_automator/generalizers/csv_data_generalizer.py | 6 +++++- schema_automator/importers/rdfs_import_engine.py | 2 +- 2 files changed, 6 insertions(+), 2 deletions(-) diff --git a/schema_automator/generalizers/csv_data_generalizer.py b/schema_automator/generalizers/csv_data_generalizer.py index 7eb639d..da623b9 100644 --- a/schema_automator/generalizers/csv_data_generalizer.py +++ b/schema_automator/generalizers/csv_data_generalizer.py @@ -645,7 +645,11 @@ def infer_range(slot: dict, vals: set, types: dict, coerce=True) -> str: if all(isfloat(v) for v in nn_vals): return 'float' if all(is_date(v) for v in nn_vals): - if all(len(str(v).split('T')) == 1 for v in nn_vals): # Check if values are just dates without time + if all( + not hasattr(parse(str(v)), 'hour') or + (parse(str(v)).hour == 0 and parse(str(v)).minute == 0 and parse(str(v)).second == 0) + for v in nn_vals + ): # Check if values are just dates without time return 'date' return 'datetime' if is_all_measurement(nn_vals): diff --git a/schema_automator/importers/rdfs_import_engine.py b/schema_automator/importers/rdfs_import_engine.py index 364b61b..d34ea0d 100644 --- a/schema_automator/importers/rdfs_import_engine.py +++ b/schema_automator/importers/rdfs_import_engine.py @@ -132,7 +132,7 @@ def convert( for slot in self.generate_rdfs_properties(g, cls_slots): if slot.name in sb.schema.slots: - warnings.warn(f"Slot '{slot.name}' already exists in schema; skipping duplicate.") + logging.warning(f"Slot '{slot.name}' already exists in schema; skipping duplicate.") else: sb.add_slot(slot) for cls in self.process_rdfs_classes(g, cls_slots): From 52893611b72eeac8ab7259a99249f3a83e9b0af3 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Tue, 13 May 2025 12:20:48 -0500 Subject: [PATCH 64/88] Remove extraneous output file --- output.log | 177 ----------------------------------------------------- 1 file changed, 177 deletions(-) delete mode 100644 output.log diff --git a/output.log b/output.log deleted file mode 100644 index a94b86e..0000000 --- a/output.log +++ /dev/null @@ -1,177 +0,0 @@ -============================= test session starts ============================== -platform linux -- Python 3.9.19, pytest-8.3.2, pluggy-1.5.0 -rootdir: /home/corey/Code/schema-automator -configfile: pyproject.toml -plugins: typeguard-4.3.0, anyio-4.4.0 -collected 44 items - -tests/test_annotators/test_bioportal_schema_annotator.py s [ 2%] -tests/test_annotators/test_jsonld_annotator.py . [ 4%] -tests/test_annotators/test_lov_schema_annotator.py s [ 6%] -tests/test_annotators/test_schema_enricher.py . [ 9%] -tests/test_generalizers/test_csv_data_generalizer.py ..... [ 20%] -tests/test_generalizers/test_fk_inference.py .. [ 25%] -tests/test_generalizers/test_from_robot_template.py . [ 27%] -tests/test_generalizers/test_json_data_generalizer.py .... [ 36%] -tests/test_generalizers/test_pandas_data_generalizer.py . [ 38%] -tests/test_generalizers/test_rdf_data_generalizer.py . [ 40%] -tests/test_importers/test_cadsr_importer.py .. [ 45%] -tests/test_importers/test_convert_shacl_owl_representation.py . [ 47%] -tests/test_importers/test_dbml_importer.py .. [ 52%] -tests/test_importers/test_dosdp_importer.py . [ 54%] -tests/test_importers/test_frictionless_importer.py . [ 56%] -tests/test_importers/test_from_owl_schemaorg.py s [ 59%] -tests/test_importers/test_jsonschema_importer.py ..... [ 70%] -tests/test_importers/test_kwalify_importer.py ... [ 77%] -tests/test_importers/test_owl_importer.py .. [ 81%] -tests/test_importers/test_rdfs_importer.py ssFs [ 90%] -tests/test_importers/test_sql_importer.py . [ 93%] -tests/test_importers/test_tabular_importer.py . [ 95%] -tests/test_utils/test_instance_extractor.py .. [100%] - -=================================== FAILURES =================================== -______________________________ test_infer_prefix _______________________________ - - def test_infer_prefix(): - """ - If the schema has no name, id or default prefix, the importer should infer them from prefix usage in the schema. - """ - rdf = StringIO(""" - @prefix rdfs: . - @prefix foo: . - - foo:Class a rdfs:Class ; - rdfs:comment "A class." . - - foo:prop a rdfs:Property ; - rdfs:comment "A property." . - """) - engine = RdfsImportEngine() -> schema = engine.convert(rdf) - -tests/test_importers/test_rdfs_importer.py:67: -_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ -schema_automator/importers/rdfs_import_engine.py:111: in convert - g.parse(file, format=format) -.venv/lib/python3.9/site-packages/rdflib/graph.py:1468: in parse - source = create_input_source( -_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ - -source = RdfsImportEngine(metamodel=SchemaView(schema=SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None...e', 'minimum_cardinality', 'key', 'subproperty_of', 'exact_cardinality'}, seen_prefixes=set(), prefix_counts=Counter()) -publicID = None, location = None, file = None, data = None, format = 'turtle' - - def create_input_source( - source: Optional[ - Union[IO[bytes], TextIO, InputSource, str, bytes, pathlib.PurePath] - ] = None, - publicID: Optional[str] = None, # noqa: N803 - location: Optional[str] = None, - file: Optional[Union[BinaryIO, TextIO]] = None, - data: Optional[Union[str, bytes, dict]] = None, - format: Optional[str] = None, - ) -> InputSource: - """ - Return an appropriate InputSource instance for the given - parameters. - """ - - # test that exactly one of source, location, file, and data is not None. - non_empty_arguments = list( - filter( - lambda v: v is not None, - [source, location, file, data], - ) - ) - - if len(non_empty_arguments) != 1: - raise ValueError( - "exactly one of source, location, file or data must be given", - ) - - input_source = None - - if source is not None: - if TYPE_CHECKING: - assert file is None - assert data is None - assert location is None - if isinstance(source, InputSource): - input_source = source - else: - if isinstance(source, str): - location = source - elif isinstance(source, pathlib.PurePath): - location = str(source) - elif isinstance(source, bytes): - data = source - elif hasattr(source, "read") and not isinstance(source, Namespace): - f = source - input_source = InputSource() - if hasattr(source, "encoding"): - input_source.setCharacterStream(source) - input_source.setEncoding(source.encoding) - try: - b = source.buffer # type: ignore[union-attr] - input_source.setByteStream(b) - except (AttributeError, LookupError): - input_source.setByteStream(source) - else: - input_source.setByteStream(f) - if f is sys.stdin: - input_source.setSystemId("file:///dev/stdin") - elif hasattr(f, "name"): - input_source.setSystemId(f.name) - else: -> raise Exception( - "Unexpected type '%s' for source '%s'" % (type(source), source) - ) -E Exception: Unexpected type '' for source 'RdfsImportEngine(metamodel=SchemaView(schema=SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The metamodel for schemas defined using the Linked Data Modeling Language framework.\n\nFor more information on LinkML:\n\n* [linkml.io](https://linkml.io) main website\n* [specification](https://w3id.org/linkml/docs/specification/)\n\nLinkML is self-describing. Every LinkML schema consists of elements\nthat instantiate classes in this metamodel.\n\nCore metaclasses:\n\n* [SchemaDefinition](https://w3id.org/linkml/SchemaDefinition)\n* [ClassDefinition](https://w3id.org/linkml/ClassDefinition)\n* [SlotDefinition](https://w3id.org/linkml/SlotDefinition)\n* [TypeDefinition](https://w3id.org/linkml/TypeDefinition)\n\nThere are many subsets of *profiles* of the metamodel, for different purposes:\n\n* [MinimalSubset](https://w3id.org/linkml/MinimalSubset)\n* [BasicSubset](https://w3id.org/linkml/BasicSubset)\n\nFor canonical reference documentation on any metamodel construct,\nrefer to the official URI for each construct, e.g.\n[https://w3id.org/linkml/is_a](https://w3id.org/linkml/is_a)', alt_descriptions={}, title='LinkML Schema Metamodel', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/meta', version=None, imports=['linkml:types', 'linkml:mappings', 'linkml:extensions', 'linkml:annotations', 'linkml:units'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'skosxl': Prefix(prefix_prefix='skosxl', prefix_reference='http://www.w3.org/2008/05/skos-xl#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'NCIT': Prefix(prefix_prefix='NCIT', prefix_reference='http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#'), 'pav': Prefix(prefix_prefix='pav', prefix_reference='http://purl.org/pav/'), 'oslc': Prefix(prefix_prefix='oslc', prefix_reference='http://open-services.net/ns/core#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/'), 'bibo': Prefix(prefix_prefix='bibo', prefix_reference='http://purl.org/ontology/bibo/'), 'swrl': Prefix(prefix_prefix='swrl', prefix_reference='http://www.w3.org/2003/11/swrl#'), 'sh': Prefix(prefix_prefix='sh', prefix_reference='http://www.w3.org/ns/shacl#'), 'owl': Prefix(prefix_prefix='owl', prefix_reference='http://www.w3.org/2002/07/owl#'), 'qb': Prefix(prefix_prefix='qb', prefix_reference='http://purl.org/linked-data/cube#'), 'prov': Prefix(prefix_prefix='prov', prefix_reference='http://www.w3.org/ns/prov#'), 'vann': Prefix(prefix_prefix='vann', prefix_reference='https://vocab.org/vann/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/'), 'cdisc': Prefix(prefix_prefix='cdisc', prefix_reference='http://rdf.cdisc.org/mms#'), 'SIO': Prefix(prefix_prefix='SIO', prefix_reference='http://semanticscience.org/resource/SIO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'dcterms', 'OIO', 'owl', 'pav'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={'MinimalSubset': SubsetDefinition(name='MinimalSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The absolute minimal set of elements necessary for defining any schema.\n\nschemas conforming to the minimal subset consist of classes, with all slots\ninlined as attributes. There are no enums.', alt_descriptions={}, title='minimal subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[]), 'BasicSubset': SubsetDefinition(name='BasicSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An extension of MinimalSubset that avoids advanced constructs and can be implemented by a broad variety of tools.\n\nThis subset roughly corresponds to the union of most standard constructs used in relational datamodel modeling,\nobject oriented modeling, and simple JSON-style modeling, while avoiding more advanced constructs from these languages.\n\nIt is often possible to translate from a more expressive schema to a BasicSubset schema, through a schema derivation\nprocess', alt_descriptions={}, title='basic subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[]), 'SpecificationSubset': SubsetDefinition(name='SpecificationSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A subset that includes all the metamodel elements that form part of the normative LinkML specification.\n\nThe complete LinkML specification can be found at [linkml:specification](https://w3id.org/linkml/specification)', alt_descriptions={}, title='specification subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[]), 'RelationalModelProfile': SubsetDefinition(name='RelationalModelProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using the classic Relational Model.\nThe Relational Model excludes collections (multivalued slots) as first class entities. Instead, these must be\nmapped to backreferences\n\nThe classic Relational Model excludes inheritance and polymorphism -- these must be rolled down to\nconcrete classes or otherwise transformed.', alt_descriptions={}, title='relational model profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[]), 'ObjectOrientedProfile': SubsetDefinition(name='ObjectOrientedProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using a minimal\nimplementation of the object oriented metamodel as employed by languages such as Java and Python, or\nin modeling frameworks like UML', alt_descriptions={}, title='object oriented profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[]), 'OwlProfile': SubsetDefinition(name='OwlProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed in OWL', alt_descriptions={}, title='owl profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, types={}, enums={'pv_formula_options': EnumDefinition(name='pv_formula_options', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The formula used to generate the set of permissible values from the code_set values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'CODE': PermissibleValue(text='CODE', description='The permissible values are the set of possible codes in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'CURIE': PermissibleValue(text='CURIE', description='The permissible values are the set of CURIES in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'URI': PermissibleValue(text='URI', description='The permissible values are the set of code URIs in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'FHIR_CODING': PermissibleValue(text='FHIR_CODING', description='The permissible values are the set of FHIR coding elements derived from the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'LABEL': PermissibleValue(text='LABEL', description='The permissible values are the set of human readable labels in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'presence_enum': EnumDefinition(name='presence_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of conditions by which a slot value should be set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'UNCOMMITTED': PermissibleValue(text='UNCOMMITTED', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PRESENT': PermissibleValue(text='PRESENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'ABSENT': PermissibleValue(text='ABSENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'relational_role_enum': EnumDefinition(name='relational_role_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of roles a slot on a relationship class can play', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'SUBJECT': PermissibleValue(text='SUBJECT', description='a slot with this role connects a relationship to its subject/source node', meaning='rdf:subject', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedSource'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OBJECT': PermissibleValue(text='OBJECT', description='a slot with this role connects a relationship to its object/target node', meaning='rdf:object', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedTarget'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PREDICATE': PermissibleValue(text='PREDICATE', description='a slot with this role connects a relationship to its predicate/property', meaning='rdf:predicate', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedProperty'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NODE': PermissibleValue(text='NODE', description='a slot with this role connects a symmetric relationship to a node that represents either subject or object node', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OTHER_ROLE': PermissibleValue(text='OTHER_ROLE', description='a slot with this role connects a relationship to a node that is not subject/object/predicate', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'alias_predicate_enum': EnumDefinition(name='alias_predicate_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='permissible values for the relationship between an element and an alias', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'EXACT_SYNONYM': PermissibleValue(text='EXACT_SYNONYM', description=None, meaning='skos:exactMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RELATED_SYNONYM': PermissibleValue(text='RELATED_SYNONYM', description=None, meaning='skos:relatedMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'BROAD_SYNONYM': PermissibleValue(text='BROAD_SYNONYM', description=None, meaning='skos:broaderMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NARROW_SYNONYM': PermissibleValue(text='NARROW_SYNONYM', description=None, meaning='skos:narrowerMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'obligation_level_enum': EnumDefinition(name='obligation_level_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'REQUIRED': PermissibleValue(text='REQUIRED', description='The metadata element is required to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RECOMMENDED': PermissibleValue(text='RECOMMENDED', description='The metadata element is recommended to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ENCOURAGED'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OPTIONAL': PermissibleValue(text='OPTIONAL', description='The metadata element is optional to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'EXAMPLE': PermissibleValue(text='EXAMPLE', description='The metadata element is an example of how to use the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'DISCOURAGED': PermissibleValue(text='DISCOURAGED', description='The metadata element is allowed but discouraged to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}, slots={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_name', 'https://linkml.io/linkml/faq/modeling.html#why-are-my-class-names-translated-to-camelcase'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['short name', 'unique name'], structured_aliases={}, mappings=[], exact_mappings=['schema:name'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'title': SlotDefinition(name='title', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A concise human-readable display label for the element. The title should mirror the name, and should use ordinary textual punctuation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['long name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:title', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'conforms_to': SlotDefinition(name='conforms_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An established standard to which the element conforms.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:implements'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:conformsTo', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implements': SlotDefinition(name='implements', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element conforms to. The referenced element is not imported into the schema for the implementing element. However, the referenced schema may be used to check conformance of the implementing element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'instantiates': SlotDefinition(name='instantiates', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element instantiates.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Controlled terms used to categorize an element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if you wish to use uncontrolled terms or terms that lack identifiers then use the keywords element'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='category', domain=None, slot_uri='dcterms:subject', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'structured_alias'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'keywords': SlotDefinition(name='keywords', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Keywords or tags used to describe the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='keyword', domain='element', slot_uri='schema:keywords', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'definition_uri': SlotDefinition(name='definition_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The native URI of the element. This is always within the namespace of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Formed by combining the default_prefix with the normalized element name'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:class_uri', 'linkml:slot_uri'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='filled in by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes': SlotDefinition(name='id_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An allowed list of prefixes for which identifiers must conform. The identifier of this class or slot must begin with the URIs referenced by this prefix', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Order of elements may be used to indicate priority order', 'If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by `:` (_should_ start if the list is open)', 'If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix (_should_ start if the list is open)'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml-model/issues/28'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes_are_closed': SlotDefinition(name='id_prefixes_are_closed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true, then the id_prefixes slot is treated as being closed, and any use of an id that does not have this prefix is considered a violation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/194'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'description': SlotDefinition(name='description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="a textual description of the element's purpose and use", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['definition'], structured_aliases={}, mappings=[], exact_mappings=['dcterms:description', 'schema:description'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:definition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_aliases': SlotDefinition(name='structured_aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of structured_alias objects, used to provide aliases in conjunction with additional metadata.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:aliases'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skosxl:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='structured_alias', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aliases': SlotDefinition(name='aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Alternate names/labels for the element. These do not alter the semantics of the schema, but may be useful to support search and alignment.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['not be confused with the metaslot alias.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['synonyms', 'alternate names', 'alternative labels', 'designations'], structured_aliases={}, mappings=[], exact_mappings=['schema:alternateName'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated': SlotDefinition(name='deprecated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Description of why and when this element will no longer be used', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note that linkml does not use a boolean to indicate deprecation status - the presence of a string value in this field is sufficient to indicate deprecation.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:deprecated'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'todos': SlotDefinition(name='todos', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Outstanding issues that needs resolution', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'notes': SlotDefinition(name='notes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='editorial notes about an element intended primarily for internal consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:editorialNote', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'comments': SlotDefinition(name='comments', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='notes and comments about an element intended primarily for external consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['rdfs:comment'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:note', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_subset': SlotDefinition(name='in_subset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='used to indicate membership of a term in a defined subset of terms used for a particular domain or application.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of use in the translator_minimal subset in the biolink model, holding the minimal set of predicates used in a translator knowledge graph'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='OIO:inSubset', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'from_schema': SlotDefinition(name='from_schema', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='id of the schema that defined the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["A stronger model would be range schema_definition, but this doesn't address the import model"], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:inScheme', array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imported_from': SlotDefinition(name='imported_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the imports entry that this element was derived from. Empty means primary source', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'see_also': SlotDefinition(name='see_also', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of related entities or URLs that may be of relevance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:seeAlso', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owned_by': SlotDefinition(name='owned_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that owns or is the steward of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['steward', 'owner'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:isDefinedBy'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_by': SlotDefinition(name='created_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that created the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'contributors': SlotDefinition(name='contributors', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that contributed to the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:contributor', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_on': SlotDefinition(name='created_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was created', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'last_updated_on': SlotDefinition(name='last_updated_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was last updated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:lastUpdatedOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'modified_by': SlotDefinition(name='modified_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that modified the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='oslc:modifiedBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'status': SlotDefinition(name='status', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='status of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bibo:draft', description=None, object=None)], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://www.hl7.org/fhir/valueset-publication-status.html', 'https://www.hl7.org/fhir/versions.html#std-process'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['workflow status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='bibo:status', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'literal_form': SlotDefinition(name='literal_form', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The literal lexical form of a structured alias; i.e the actual alias value.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alias_name', 'string_value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='skosxl:literalForm', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_predicate': SlotDefinition(name='alias_predicate', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The relationship between an element and its alias.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='rdf:predicate', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='predicate', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alias_predicate_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_contexts': SlotDefinition(name='alias_contexts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The context in which an alias should be applied', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='contexts', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_language': SlotDefinition(name='in_language', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.rfc-editor.org/rfc/bcp/bcp47.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='the primary language used in the sources', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Recommended to use a string from IETF BCP 47'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='schema:inLanguage', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source': SlotDefinition(name='source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A related resource from which the element is derived.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The described resource may be derived from the related resource in whole or in part'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['origin', 'derived from'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['prov:wasDerivedFrom', 'schema:isBasedOn'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:source', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'publisher': SlotDefinition(name='publisher', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An entity responsible for making the resource available', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:publisher', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class or slot from which inheritable metaslots are propagated from. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abstract': SlotDefinition(name='abstract', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot cannot be directly instantiated and is intended for grouping purposes.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixin': SlotDefinition(name='mixin', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot is intended to be inherited from without being an is_a parent. mixins should not be inherited from using is_a, except by other mixins.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['trait'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent classes or slots from which inheritable metaslots are propagated from.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierarchy, while keeping the benefits of multiple inheritance'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['traits'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class.", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'values_from': SlotDefinition(name='values_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The identifier of a "value set" -- a set of identifiers that form the possible values for the range of a slot. Note: this is different than \'subproperty_of\' in that \'subproperty_of\' is intended to be a single ontology term while \'values_from\' is the identifier of an entire value set. Additionally, this is different than an enumeration in that in an enumeration, the values of the enumeration are listed directly in the model itself. Setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set': SlotDefinition(name='code_set', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the identifier of an enumeration code set.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_version': SlotDefinition(name='code_set_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version identifier of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['we assume that version identifiers lexically sort in temporal order. Recommend semver when possible'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_tag': SlotDefinition(name='code_set_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version tag of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['enum_expression cannot have both a code_set_tag and a code_set_version'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pv_formula': SlotDefinition(name='pv_formula', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Defines the specific formula to be used to generate the permissible values.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['you cannot have BOTH the permissible_values and permissible_value_formula tag', 'code_set must be supplied for this to be valid'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pv_formula_options', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'permissible_values': SlotDefinition(name='permissible_values', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of possible values for a slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['coded values'], structured_aliases={}, mappings=[], exact_mappings=['cdisc:PermissibleValue'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_uri': SlotDefinition(name='enum_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the enum that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include': SlotDefinition(name='include', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be included, after subtracting the minus set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minus': SlotDefinition(name='minus', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be subtracted from the enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherits': SlotDefinition(name='inherits', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum definition that is used as the basis to create a new enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['All permissible values for all inherited enums are copied to form the initial seed set'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'matches': SlotDefinition(name='matches', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a match query that is used to calculate the list of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='match_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier_pattern': SlotDefinition(name='identifier_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A regular expression that is used to obtain a set of identifiers from a source_ontology to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='match_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'concepts': SlotDefinition(name='concepts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of identifiers that are used to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reachable_from': SlotDefinition(name='reachable_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a query for obtaining a list of permissible values based on graph reachability', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='reachability_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_ontology': SlotDefinition(name='source_ontology', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An ontology or vocabulary or terminology that is used in a query to obtain a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['examples include schema.org, wikidata, or an OBO ontology', 'for obo ontologies we recommend CURIEs of the form obo:cl, obo:envo, etc'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['terminology', 'vocabulary'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_direct': SlotDefinition(name='is_direct', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the reachability query should only include directly related nodes, if False then include also transitively connected', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['non-transitive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse_up': SlotDefinition(name='traverse_up', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the direction of the reachability query is reversed and ancestors are retrieved', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestors'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include_self': SlotDefinition(name='include_self', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the query is reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reflexive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relationship_types': SlotDefinition(name='relationship_types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of relationship types (properties) that are used in a reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['predicates', 'properties'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_nodes': SlotDefinition(name='source_nodes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of nodes that are used in the reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'text': SlotDefinition(name='text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The actual permissible value itself', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['there are no constraints on the text of the permissible value, but for many applications you may want to consider following idiomatic forms and using computer-friendly forms'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:notation'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'meaning': SlotDefinition(name='meaning', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value meaning of a permissible value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['we may want to change the range of this (and other) elements in the model to an entitydescription type construct'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/ISO/IEC_11179'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV meaning'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id': SlotDefinition(name='id', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The official schema URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'emit_prefixes': SlotDefinition(name='emit_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'version': SlotDefinition(name='version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='particular version of schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:schemaVersion'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='pav:version', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imports': SlotDefinition(name='imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of schemas that are to be included in this schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_imports': SlotDefinition(name='structured_imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of specifications for how to import elements from external schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='import_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'license': SlotDefinition(name='license', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='license for the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='dcterms:license', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_curi_maps': SlotDefinition(name='default_curi_maps', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_prefix': SlotDefinition(name='default_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix that is used for all elements within a schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='default_ns', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_range': SlotDefinition(name='default_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='default slot range to be used if range element is omitted from a slot definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subsets': SlotDefinition(name='subsets', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all subset definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['OIO:hasSubset'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'types': SlotDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all type definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enums': SlotDefinition(name='enums', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all enum definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_definitions': SlotDefinition(name='slot_definitions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all slot definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note the formal name of this element is slot_definitions, but it has alias slots, which is the canonical form used in yaml/json serializes of schemas.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='slots', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classes': SlotDefinition(name='classes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all class definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'metamodel_version': SlotDefinition(name='metamodel_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Version of the metamodel used to load the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file': SlotDefinition(name='source_file', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name, uri or description of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_date': SlotDefinition(name='source_file_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='modification date of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_size': SlotDefinition(name='source_file_size', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='size in bytes of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'generation_date': SlotDefinition(name='generation_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='date and time that the schema was loaded/generated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slots': SlotDefinition(name='slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='collection of slot names that are applicable to a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the list of applicable slots is inherited from parent classes', 'This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_usage': SlotDefinition(name='slot_usage', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the refinement of a slot in the context of the containing class definition.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_range': SlotDefinition(name='enum_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An inlined enumeration', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range_expression': SlotDefinition(name='range_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A range that is described as a boolean expression combining existing ranges', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['one use for this is being able to describe a range using any_of expressions, for example to combine two enums'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['path_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean_slot': SlotDefinition(name='boolean_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A grouping of slots that expression a boolean operator over a list of operands', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if at least one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:or'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=101, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if only one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:xone'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=103, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if none of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:not'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=105, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if all of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:and'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=107, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'preconditions': SlotDefinition(name='preconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold in order for the rule to be applicable to an instance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if', 'body', 'antecedents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=111, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:condition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'postconditions': SlotDefinition(name='postconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['then', 'head', 'consequents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=113, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elseconditions': SlotDefinition(name='elseconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions no not hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['else'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=115, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bidirectional': SlotDefinition(name='bidirectional', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in addition to preconditions entailing postconditions, the postconditions entail the preconditions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['iff', 'if and only if'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'open_world': SlotDefinition(name='open_world', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rank': SlotDefinition(name='rank', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the relative order in which the element occurs, lower values are given precedence', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the rank of an element does not affect the semantics'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['order', 'precedence', 'display order'], structured_aliases={}, mappings=[], exact_mappings=['qudt:order', 'qb:order'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:order', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'class_rule'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deactivated': SlotDefinition(name='deactivated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a deactivated rule is not executed by the rules engine', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:deactivated', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the collection of rules that apply to all members of this class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri='sh:rule', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classification_rules': SlotDefinition(name='classification_rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The collection of classification rules that apply to all members of this class. Classification rules allow for automatically assigning the instantiated type of an instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_conditions': SlotDefinition(name='slot_conditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='expresses constraints on a group of slots for a class expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'attributes': SlotDefinition(name='attributes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Inline definition of slots', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'class_uri': SlotDefinition(name='class_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning class_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subclass_of': SlotDefinition(name='subclass_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='DEPRECATED -- rdfs:subClassOf to be emitted in OWL generation', alt_descriptions={}, title=None, deprecated='Use is_a instead', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:subClassOf'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'defining_slots': SlotDefinition(name='defining_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that the domain element consists exactly of the members of the element in the range.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['this only applies in the OWL generation'], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tree_root': SlotDefinition(name='tree_root', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates that this is the Container class which forms the root of the serialized document structure in tree serializations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['each schema should have at most one tree root'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/intro/tutorial02.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_keys': SlotDefinition(name='unique_keys', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of named unique keys for this class. Unique keys may be singular or compound.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#unique-key'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:hasKey'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='unique_key', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_name': SlotDefinition(name='unique_key_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unique key', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'consider_nulls_inequal': SlotDefinition(name='consider_nulls_inequal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='By default, None values are considered equal for the purposes of comparisons in determining uniqueness. Set this to true to treat missing values as per ANSI-SQL NULLs, i.e NULL=NULL is always False.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_slots': SlotDefinition(name='unique_key_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='list of slot names that form a key. The tuple formed from the values of all these slots should be unique.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_names_unique': SlotDefinition(name='slot_names_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then induced/mangled slot names are not created for class_usage and attributes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain': SlotDefinition(name='domain', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the subject of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts that X is an instance of C1\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the object of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts Y is an instance of C2\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['range is underspecified, as not all elements can appear as the range of a slot.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value domain'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent='default_range', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['enum_binding', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_uri': SlotDefinition(name='slot_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the slot in a linked data context. The URI may come from any namespace and may be shared between schemas.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning slot_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='slot_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'multivalued': SlotDefinition(name='multivalued', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that slot can have more than one value and should be represented using a list or collection structure.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'array': SlotDefinition(name='array', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='coerces the value of the slot into an array and defines the dimensions of that array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='array_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dimensions': SlotDefinition(name='dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='definitions of each axis in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['axes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=True, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='dimension_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_number_dimensions': SlotDefinition(name='minimum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='minimum number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_number_dimensions': SlotDefinition(name='maximum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='maximum number of dimensions in the array, or False if explicitly no maximum. If this is unset, and an explicit list of dimensions are passed using dimensions, then this is interpreted as a closed list and the maximum_number_dimensions is the length of the dimensions list, unless this value is set to False', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_number_dimensions cannot be less than minimum_number_dimensions'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])], all_of=[]), 'exact_number_dimensions': SlotDefinition(name='exact_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='exact number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_number_dimensions is set, then minimum_number_dimensions and maximum_number_dimensions must be unset or have the same value'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherited': SlotDefinition(name='inherited', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the *value* of a slot is inherited by subclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only', 'Inherited applies to slot values. Parent *slots* are always inherited by subclasses'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'readonly': SlotDefinition(name='readonly', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If present, slot is read only. Text explains why', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ifabsent': SlotDefinition(name='ifabsent', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='function that provides a default value for the slot.\n * [Tt]rue -- boolean True\n * [Ff]alse -- boolean False\n * bnode -- blank node identifier\n * class_curie -- CURIE for the containing class\n * class_uri -- URI for the containing class\n * default_ns -- schema default namespace\n * default_range -- schema default range\n * int(value) -- integer value\n * slot_uri -- URI for the slot\n * slot_curie -- CURIE for the slot\n * string(value) -- string value\n * EnumName(PermissibleValue) -- enum value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:equals_expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:defaultValue'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implicit_prefix': SlotDefinition(name='implicit_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Causes the slot value to be interpreted as a uriorcurie after prefixing with this string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_specification_constant': SlotDefinition(name='value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain the a slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_value_specification_constant': SlotDefinition(name='list_value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_presence': SlotDefinition(name='value_presence', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if PRESENT then a value must be present (for lists there must be at least one value). If ABSENT then a value must be absent (for lists, must be empty)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='presence_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string': SlotDefinition(name='equals_string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number': SlotDefinition(name='equals_number', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range of a number and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_expression': SlotDefinition(name='equals_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot must equal the value of the evaluated expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["for example, a 'length' slot may have an equals_expression with value '(end-start)+1'"], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/developers/inference.html', 'https://linkml.io/linkml/schemas/advanced.html#equals-expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact_cardinality': SlotDefinition(name='exact_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the exact number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_cardinality is set, then minimum_cardinalty and maximum_cardinality must be unset or have the same value'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_cardinality': SlotDefinition(name='minimum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the minimum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_cardinality': SlotDefinition(name='maximum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the maximum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_cardinality cannot be less than minimum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string_in': SlotDefinition(name='equals_string_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number_in': SlotDefinition(name='equals_number_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range number and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_member': SlotDefinition(name='has_member', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with at least one member satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_members': SlotDefinition(name='all_members', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with all members satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'singular_name': SlotDefinition(name='singular_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name that is used in the singular form', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this may be used in some schema translations where use of a singular form is idiomatic, for example RDF'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:altLabel'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'required': SlotDefinition(name='required', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot must be present in instances of the class definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'recommended': SlotDefinition(name='recommended', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot should be present in instances of the class definition, but this is not required', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['This is to be used where not all data is expected to conform to having a required field', 'If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/177'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inapplicable': SlotDefinition(name='inapplicable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that values for this slot must not be present', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['By default all slots are applicable. The main use case for this slot is as an override in a subclass'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined': SlotDefinition(name='inlined', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['classes without keys or identifiers are necessarily inlined as lists', 'only applicable in tree-like serializations, e.g json, yaml'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_list': SlotDefinition(name='inlined_as_list', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The default loader will accept either list or dictionary form as input. This parameter controls internal\nrepresentation and output.', 'A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key\nis the key or identifier and whose value is the one additional element. This form is still stored according\nto the inlined_as_list setting.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_simple_dict': SlotDefinition(name='inlined_as_simple_dict', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a simple dict whose values are all atoms', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=28, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_ordered': SlotDefinition(name='list_elements_ordered', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the order of elements of a multivalued slot is guaranteed to be preserved. If False, the order may still be preserved but this is not guaranteed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_unique': SlotDefinition(name='list_elements_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then there must be no duplicates in the elements of a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shared': SlotDefinition(name='shared', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the relationship between the slot domain and range is many to one or many to many', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inverse functional', 'many to one or many'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'key': SlotDefinition(name='key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identify the elements within a single container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['key is inherited', 'a given domain can have at most one key slot (restriction to be removed in the future)', 'identifiers and keys are mutually exclusive. A given domain cannot have both', 'a key slot is automatically required. Keys cannot be optional'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier': SlotDefinition(name='identifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identifies the elements. There can be at most one identifier or key per container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['identifier is inherited', 'a key slot is automatically required. Identifiers cannot be optional', 'a given domain can have at most one identifier', 'identifiers and keys are mutually exclusive. A given domain cannot have both'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Identifier', 'linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary key', 'ID', 'UID', 'code'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'designates_type': SlotDefinition(name='designates_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/type-designators.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['type designator'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias': SlotDefinition(name='alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of alias is used within this metamodel, slot_definitions is aliases as slots', 'not to be confused with aliases, which indicates a set of terms to be used for search purposes.'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='skos:prefLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owner': SlotDefinition(name='owner', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the "owner" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot', alt_descriptions={}, title=None, deprecated='Will be replaced by domain_of and eventually removed', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by loader -- either class domain or slot domain', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain_of': SlotDefinition(name='domain_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the class(es) that reference the slot in a "slots" or "slot_usage" context', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:domainIncludes', 'SIO:000011'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_usage_slot': SlotDefinition(name='is_usage_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that this slot was defined in a slot_usage situation', alt_descriptions={}, title=None, deprecated='Replaced by usage_slot_name', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'usage_slot_name': SlotDefinition(name='usage_slot_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of the slot referenced in the slot_usage', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subproperty_of': SlotDefinition(name='subproperty_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Ontology property which this slot is a subproperty of. Note: setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='RO:HOM0000001', description='this is the RO term for "in homology relationship with", and used as a value of subproperty of this means that any ontological child (related to RO:HOM0000001 via an is_a relationship), is a valid value for the slot that declares this with the subproperty_of tag. This differs from the \'values_from\' meta model component in that \'values_from\' requires the id of a value set (said another way, if an entire ontology had a curie/identifier that was the identifier for the entire ontology, then that identifier would be used in \'values_from.\')', object=None)], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='rdfs:subPropertyOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'children_are_mutually_disjoint': SlotDefinition(name='children_are_mutually_disjoint', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true then all direct is_a children are mutually disjoint and share no instances in common', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_logical_characteristic': SlotDefinition(name='relational_logical_characteristic', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract grouping for metaslots that describe logical properties of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symmetric': SlotDefinition(name='symmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is symmetric, and i.s=v, then v.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:SymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asymmetric': SlotDefinition(name='asymmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['asymmetry is the combination of antisymmetry and irreflexivity'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:AsymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive': SlotDefinition(name='reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is reflexive, then i.s=i for all instances i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:ReflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'irreflexive': SlotDefinition(name='irreflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is irreflexive, then there exists no i such i.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:IrreflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'locally_reflexive': SlotDefinition(name='locally_reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is locally_reflexive, then i.s=i for all instances i where s is a class slot for the type of i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive': SlotDefinition(name='transitive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is transitive, and i.s=z, and s.s=j, then i.s=j', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:TransitiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive_form_of': SlotDefinition(name='transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Example: ancestor_of is the transitive_form_of parent_of'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive_transitive_form_of': SlotDefinition(name='reflexive_transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='transitive_form_of including the reflexive case', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='transitive_form_of', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inverse': SlotDefinition(name='inverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="indicates that any instance of d s r implies that there is also an instance of r s' d", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='owl:inverseOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_class_field': SlotDefinition(name='is_class_field', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that for any instance, i, the domain of this slot will include an assertion of i s range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'role': SlotDefinition(name='role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a textual descriptor that indicates the role played by the slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the primary use case for this slot is to provide a textual descriptor of a generic slot name when used in the context of a more specific class'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_value': SlotDefinition(name='minimum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or higher than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['low value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_value': SlotDefinition(name='maximum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or lower than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['high value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'interpolated': SlotDefinition(name='interpolated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then the pattern is first string interpolated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'partial_match': SlotDefinition(name='partial_match', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if not true then the pattern must match the whole string, as if enclosed in ^...$', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pattern': SlotDefinition(name='pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'syntax': SlotDefinition(name='syntax', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string. May be interpolated.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_pattern': SlotDefinition(name='structured_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to the regular expression in the pattern expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#structured-patterns'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pattern_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'string_serialization': SlotDefinition(name='string_serialization', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots.\nWe call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion.\nImplementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects\nFor example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/issues/128'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'type_mapping'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bindings': SlotDefinition(name='bindings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of enum bindings that specify how a slot can be bound to a permissible value from an enumeration.\nLinkML provides enums to allow string values to be restricted to one of a set of permissible values (specified statically or dynamically).\nEnum bindings allow enums to be bound to any object, including complex nested objects. For example, given a (generic) class Concept with slots id and label, it may be desirable to restrict the values the id takes on in a given context. For example, a HumanSample class may have a slot for representing sample site, with a range of concept, but the values of that slot may be restricted to concepts from a particular branch of an anatomy ontology.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_binding', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'binds_value_of': SlotDefinition(name='binds_value_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A path to a slot that is being bound to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_binding', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'obligation_level': SlotDefinition(name='obligation_level', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='obligation_level_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_mappings': SlotDefinition(name='type_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="A collection of type mappings that specify how a slot's range should be mapped or serialized in different frameworks", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_mapping', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'framework_key': SlotDefinition(name='framework_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of a format that can be used to serialize LinkML data. The string value should be a code from the LinkML frameworks vocabulary, but this is not strictly enforced', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='framework', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mapped_type': SlotDefinition(name='mapped_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='type to coerce to', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='type', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'typeof': SlotDefinition(name='typeof', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A parent type from which type properties are inherited', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the target type definition of the typeof slot is referred to as the "parent type"', 'the type definition containing the typeof slot is referred to as the "child type"', 'type definitions without a typeof slot are referred to as a "root type"'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'base': SlotDefinition(name='base', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='python base type in the LinkML runtime that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['every root type must have a base', 'the base is inherited by child types but may be overridden. Base compatibility is not checked.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_uri': SlotDefinition(name='type_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The uri that defines the possible values for the type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps)", 'every root type must have a type uri'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='uri', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'repr': SlotDefinition(name='repr', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name of the python object that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_text': SlotDefinition(name='alt_description_text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='text of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_source': SlotDefinition(name='alt_description_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the source of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='source', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_descriptions': SlotDefinition(name='alt_descriptions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A sourced alternative description for an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alternate definitions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alt_description', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value': SlotDefinition(name='value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri='skos:example', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_description': SlotDefinition(name='value_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='description of what the value is doing', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_object': SlotDefinition(name='value_object', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='direct object representation of the example', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='object', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'examples': SlotDefinition(name='examples', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example usages of an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['vann:example'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='example', domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='example', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_prefix': SlotDefinition(name='prefix_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix components of a prefix expansions. This is the part that appears before the colon in a CURIE.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:prefix', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_reference': SlotDefinition(name='prefix_reference', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The namespace to which a prefix expands to.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:namespace', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefixes': SlotDefinition(name='prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of prefix expansions that specify how CURIEs can be expanded to URIs', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='sh:declare', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='prefix', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_key': SlotDefinition(name='setting_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the variable name for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_value': SlotDefinition(name='setting_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The value assigned for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'settings': SlotDefinition(name='settings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of global variable settings', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['global variables are used in string interpolation in structured patterns'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['constants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_from': SlotDefinition(name='import_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_as': SlotDefinition(name='import_as', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_map': SlotDefinition(name='import_map', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_source': SlotDefinition(name='local_name_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the ncname of the source of the name', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_value': SlotDefinition(name='local_name_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name assigned to an element in a given ontology', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_names': SlotDefinition(name='local_names', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='local_name', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_group': SlotDefinition(name='slot_group', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='allows for grouping of related slots into a grouping slot that serves the role of a group', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['slot groups do not change the semantics of a model but are a useful way of visually grouping related slots'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='sh:group', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression='True', exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this slot is a grouping slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:PropertyGroup'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in a sequential list, this indicates the next member', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reversed': SlotDefinition(name='reversed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if the slot is to be inversed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse': SlotDefinition(name='traverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot to traverse', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'path_rule': SlotDefinition(name='path_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'represents_relationship': SlotDefinition(name='represents_relationship', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this class represents a relationship rather than an entity', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond', 'in the context of RDF, this should be used when instances of the class are `rdf:Statement`s', 'in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['rdf:Statement', 'https://patterns.dataincubator.org/book/qualified-relation.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['is_reified'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_role': SlotDefinition(name='relational_role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the role a slot on a relationship class plays, for example, the subject, object or predicate roles', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this should only be used on slots that are applicable to class that represent relationships', 'in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary', 'in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reification_role'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='relational_role_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'Anything': ClassDefinition(name='Anything', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri='linkml:Any', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'common_metadata': ClassDefinition(name='common_metadata', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Generic metadata shared across definitions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['description', 'alt_descriptions', 'title', 'deprecated', 'todos', 'notes', 'comments', 'examples', 'in_subset', 'from_schema', 'imported_from', 'source', 'in_language', 'see_also', 'deprecated element has exact replacement', 'deprecated element has possible replacement', 'aliases', 'structured_aliases', 'mappings', 'exact mappings', 'close mappings', 'related mappings', 'narrow mappings', 'broad mappings', 'created_by', 'contributors', 'created_on', 'last_updated_on', 'modified_by', 'status', 'rank', 'categories', 'keywords'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'element': ClassDefinition(name='element', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A named element in the model', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data element', 'object'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['name', 'id_prefixes', 'id_prefixes_are_closed', 'definition_uri', 'local_names', 'conforms_to', 'implements', 'instantiates'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'schema_definition': ClassDefinition(name='schema_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of definitions that make up a schema or a data model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_dictionary'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data dictionary', 'data model', 'information model', 'logical model', 'schema', 'model'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['qb:ComponentSet', 'owl:Ontology'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'version', 'imports', 'license', 'prefixes', 'emit_prefixes', 'default_curi_maps', 'default_prefix', 'default_range', 'subsets', 'types', 'enums', 'slot_definitions', 'classes', 'metamodel_version', 'source_file', 'source_file_date', 'source_file_size', 'generation_date', 'slot_names_unique', 'settings', 'bindings'], slot_usage={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a unique name for the schema that is both human-readable and consists of only characters from the NCName set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=True, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_expression': ClassDefinition(name='type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract class grouping named types and anonymous type expressions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'equals_string', 'equals_string_in', 'equals_number', 'minimum_value', 'maximum_value', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_type_expression': ClassDefinition(name='anonymous_type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A type expression that is not a top-level named type definition. Used for nesting.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_definition': ClassDefinition(name='type_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that whose instances are atomic scalar values that can be mapped to primitive types', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['typeof', 'base', 'type_uri', 'repr', 'union_of'], slot_usage={'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'subset_definition': ClassDefinition(name='subset_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that can be used to group other metamodel elements', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'definition': ClassDefinition(name='definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='abstract base class for core metaclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_definition'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='element', abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['is_a', 'abstract', 'mixin', 'mixins', 'apply_to', 'values_from', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_expression': ClassDefinition(name='enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that constrains the range of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['code_set', 'code_set_tag', 'code_set_version', 'pv_formula', 'permissible_values', 'include', 'minus', 'inherits', 'reachable_from', 'matches', 'concepts'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_enum_expression': ClassDefinition(name='anonymous_enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum_expression that is not named', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_definition': ClassDefinition(name='enum_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances must be drawn from a specified set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['enum', 'enumeration', 'semantic enumeration', 'value set', 'term set', 'concept set', 'code set', 'Terminology Value Set', 'answer list', 'value domain'], structured_aliases={}, mappings=[], exact_mappings=['qb:HierarchicalCodeList', 'NCIT:C113497', 'cdisc:ValueDomain'], close_mappings=['skos:ConceptScheme'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['enum_uri'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_binding': ClassDefinition(name='enum_binding', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binding of a slot or a class to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'obligation_level', 'binds_value_of', 'pv_formula'], slot_usage={'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'match_query': ClassDefinition(name='match_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissivle values via a query that matches on properties of the external concepts.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['identifier_pattern', 'source_ontology'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'reachability_query': ClassDefinition(name='reachability_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissible values via walking from a set of source nodes to a set of descendants or ancestors over a set of relationship types.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['source_ontology', 'source_nodes', 'relationship_types', 'is_direct', 'include_self', 'traverse_up'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'structured_alias': ClassDefinition(name='structured_alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='object that contains meta data about a synonym or alias including where it came from (source) and its scope (narrow, broad, etc.)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['literal_form', 'alias_predicate', 'categories', 'alias_contexts'], slot_usage={'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The category or categories of an alias. This can be drawn from any relevant vocabulary', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://w3id.org/mod#acronym', description='An acronym', object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='skosxl:Label', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'expression': ClassDefinition(name='expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='general mixin for any class that can represent some form of expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_expression': ClassDefinition(name='anonymous_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract parent class for any nested expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['anonymous expressions are useful for when it is necessary to build a complex expression without introducing a named element for each sub-expression'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'path_expression': ClassDefinition(name='path_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that describes an abstract path from an object to another through a sequence of slot lookups', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['followed_by', 'none_of', 'any_of', 'all_of', 'exactly_one_of', 'reversed', 'traverse', 'range_expression'], slot_usage={'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_expression': ClassDefinition(name='slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that constrains the range of values a slot can take', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'range_expression', 'enum_range', 'bindings', 'required', 'recommended', 'multivalued', 'inlined', 'inlined_as_list', 'minimum_value', 'maximum_value', 'pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'value_presence', 'equals_string', 'equals_string_in', 'equals_number', 'equals_expression', 'exact_cardinality', 'minimum_cardinality', 'maximum_cardinality', 'has_member', 'all_members', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_slot_expression': ClassDefinition(name='anonymous_slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_definition': ClassDefinition(name='slot_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that describes how instances are related to other instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['slot', 'field', 'property', 'attribute', 'column', 'variable'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdf:Property', 'qb:ComponentProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['singular_name', 'domain', 'slot_uri', 'array', 'inherited', 'readonly', 'ifabsent', 'list_elements_unique', 'list_elements_ordered', 'shared', 'key', 'identifier', 'designates_type', 'alias', 'owner', 'domain_of', 'subproperty_of', 'symmetric', 'reflexive', 'locally_reflexive', 'irreflexive', 'asymmetric', 'transitive', 'inverse', 'is_class_field', 'transitive_form_of', 'reflexive_transitive_form_of', 'role', 'is_usage_slot', 'usage_slot_name', 'relational_role', 'slot_group', 'is_grouping_slot', 'path_rule', 'disjoint_with', 'children_are_mutually_disjoint', 'union_of', 'type_mappings'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent slot from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin slots from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_expression': ClassDefinition(name='class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A boolean expression that can be used to dynamically determine membership of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['any_of', 'exactly_one_of', 'none_of', 'all_of', 'slot_conditions'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_class_expression': ClassDefinition(name='anonymous_class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['is_a'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_definition': ClassDefinition(name='class_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances are complex objects that may have slot-value assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['table', 'record', 'template', 'message', 'observation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:Class'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['slots', 'slot_usage', 'attributes', 'class_uri', 'subclass_of', 'union_of', 'defining_slots', 'tree_root', 'unique_keys', 'rules', 'classification_rules', 'slot_names_unique', 'represents_relationship', 'disjoint_with', 'children_are_mutually_disjoint'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin classes from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_level_rule': ClassDefinition(name='class_level_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that is applied to classes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_rule': ClassDefinition(name='class_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that applies to instances of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if rule'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:TripleRule', 'swrl:Imp'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='class_level_rule', abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['preconditions', 'postconditions', 'elseconditions', 'bidirectional', 'open_world', 'rank', 'deactivated'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'array_expression': ClassDefinition(name='array_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['exact_number_dimensions', 'minimum_number_dimensions', 'maximum_number_dimensions', 'dimensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'dimension_expression': ClassDefinition(name='dimension_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines one of the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['alias', 'maximum_cardinality', 'minimum_cardinality', 'exact_cardinality'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'pattern_expression': ClassDefinition(name='pattern_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a regular expression pattern used to evaluate conformance of a string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['syntax', 'interpolated', 'partial_match'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'import_expression': ClassDefinition(name='import_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression describing an import', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['import_from', 'import_as', 'import_map'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'setting': ClassDefinition(name='setting', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='assignment of a key to a value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['setting_key', 'setting_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'prefix': ClassDefinition(name='prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='prefix URI tuple', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['prefix_prefix', 'prefix_reference'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'local_name': ClassDefinition(name='local_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed label', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['local_name_source', 'local_name_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'example': ClassDefinition(name='example', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='usage example and description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['value', 'value_description', 'value_object'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'alt_description': ClassDefinition(name='alt_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['structured description'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['alt_description_source', 'alt_description_text'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'permissible_value': ClassDefinition(name='permissible_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a permissible value, accompanied by intended text and an optional mapping to a concept URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:Concept'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['text', 'description', 'meaning', 'unit', 'instantiates', 'implements', 'is_a', 'mixins'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'unique_key': ClassDefinition(name='unique_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of slots whose values uniquely identify an instance of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['unique_key_name', 'unique_key_slots', 'consider_nulls_inequal'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_mapping': ClassDefinition(name='type_mapping', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Represents how a slot or type can be serialized to a format.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['framework_key', 'mapped_type', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file=None, source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), schema_map={'meta': SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The metamodel for schemas defined using the Linked Data Modeling Language framework.\n\nFor more information on LinkML:\n\n* [linkml.io](https://linkml.io) main website\n* [specification](https://w3id.org/linkml/docs/specification/)\n\nLinkML is self-describing. Every LinkML schema consists of elements\nthat instantiate classes in this metamodel.\n\nCore metaclasses:\n\n* [SchemaDefinition](https://w3id.org/linkml/SchemaDefinition)\n* [ClassDefinition](https://w3id.org/linkml/ClassDefinition)\n* [SlotDefinition](https://w3id.org/linkml/SlotDefinition)\n* [TypeDefinition](https://w3id.org/linkml/TypeDefinition)\n\nThere are many subsets of *profiles* of the metamodel, for different purposes:\n\n* [MinimalSubset](https://w3id.org/linkml/MinimalSubset)\n* [BasicSubset](https://w3id.org/linkml/BasicSubset)\n\nFor canonical reference documentation on any metamodel construct,\nrefer to the official URI for each construct, e.g.\n[https://w3id.org/linkml/is_a](https://w3id.org/linkml/is_a)', alt_descriptions={}, title='LinkML Schema Metamodel', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/meta', version=None, imports=['linkml:types', 'linkml:mappings', 'linkml:extensions', 'linkml:annotations', 'linkml:units'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'skosxl': Prefix(prefix_prefix='skosxl', prefix_reference='http://www.w3.org/2008/05/skos-xl#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'NCIT': Prefix(prefix_prefix='NCIT', prefix_reference='http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#'), 'pav': Prefix(prefix_prefix='pav', prefix_reference='http://purl.org/pav/'), 'oslc': Prefix(prefix_prefix='oslc', prefix_reference='http://open-services.net/ns/core#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/'), 'bibo': Prefix(prefix_prefix='bibo', prefix_reference='http://purl.org/ontology/bibo/'), 'swrl': Prefix(prefix_prefix='swrl', prefix_reference='http://www.w3.org/2003/11/swrl#'), 'sh': Prefix(prefix_prefix='sh', prefix_reference='http://www.w3.org/ns/shacl#'), 'owl': Prefix(prefix_prefix='owl', prefix_reference='http://www.w3.org/2002/07/owl#'), 'qb': Prefix(prefix_prefix='qb', prefix_reference='http://purl.org/linked-data/cube#'), 'prov': Prefix(prefix_prefix='prov', prefix_reference='http://www.w3.org/ns/prov#'), 'vann': Prefix(prefix_prefix='vann', prefix_reference='https://vocab.org/vann/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/'), 'cdisc': Prefix(prefix_prefix='cdisc', prefix_reference='http://rdf.cdisc.org/mms#'), 'SIO': Prefix(prefix_prefix='SIO', prefix_reference='http://semanticscience.org/resource/SIO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'dcterms', 'OIO', 'owl', 'pav'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={'MinimalSubset': SubsetDefinition(name='MinimalSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The absolute minimal set of elements necessary for defining any schema.\n\nschemas conforming to the minimal subset consist of classes, with all slots\ninlined as attributes. There are no enums.', alt_descriptions={}, title='minimal subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[]), 'BasicSubset': SubsetDefinition(name='BasicSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An extension of MinimalSubset that avoids advanced constructs and can be implemented by a broad variety of tools.\n\nThis subset roughly corresponds to the union of most standard constructs used in relational datamodel modeling,\nobject oriented modeling, and simple JSON-style modeling, while avoiding more advanced constructs from these languages.\n\nIt is often possible to translate from a more expressive schema to a BasicSubset schema, through a schema derivation\nprocess', alt_descriptions={}, title='basic subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[]), 'SpecificationSubset': SubsetDefinition(name='SpecificationSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A subset that includes all the metamodel elements that form part of the normative LinkML specification.\n\nThe complete LinkML specification can be found at [linkml:specification](https://w3id.org/linkml/specification)', alt_descriptions={}, title='specification subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[]), 'RelationalModelProfile': SubsetDefinition(name='RelationalModelProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using the classic Relational Model.\nThe Relational Model excludes collections (multivalued slots) as first class entities. Instead, these must be\nmapped to backreferences\n\nThe classic Relational Model excludes inheritance and polymorphism -- these must be rolled down to\nconcrete classes or otherwise transformed.', alt_descriptions={}, title='relational model profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[]), 'ObjectOrientedProfile': SubsetDefinition(name='ObjectOrientedProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using a minimal\nimplementation of the object oriented metamodel as employed by languages such as Java and Python, or\nin modeling frameworks like UML', alt_descriptions={}, title='object oriented profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[]), 'OwlProfile': SubsetDefinition(name='OwlProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed in OWL', alt_descriptions={}, title='owl profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, types={}, enums={'pv_formula_options': EnumDefinition(name='pv_formula_options', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The formula used to generate the set of permissible values from the code_set values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'CODE': PermissibleValue(text='CODE', description='The permissible values are the set of possible codes in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'CURIE': PermissibleValue(text='CURIE', description='The permissible values are the set of CURIES in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'URI': PermissibleValue(text='URI', description='The permissible values are the set of code URIs in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'FHIR_CODING': PermissibleValue(text='FHIR_CODING', description='The permissible values are the set of FHIR coding elements derived from the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'LABEL': PermissibleValue(text='LABEL', description='The permissible values are the set of human readable labels in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'presence_enum': EnumDefinition(name='presence_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of conditions by which a slot value should be set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'UNCOMMITTED': PermissibleValue(text='UNCOMMITTED', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PRESENT': PermissibleValue(text='PRESENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'ABSENT': PermissibleValue(text='ABSENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'relational_role_enum': EnumDefinition(name='relational_role_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of roles a slot on a relationship class can play', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'SUBJECT': PermissibleValue(text='SUBJECT', description='a slot with this role connects a relationship to its subject/source node', meaning='rdf:subject', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedSource'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OBJECT': PermissibleValue(text='OBJECT', description='a slot with this role connects a relationship to its object/target node', meaning='rdf:object', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedTarget'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PREDICATE': PermissibleValue(text='PREDICATE', description='a slot with this role connects a relationship to its predicate/property', meaning='rdf:predicate', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedProperty'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NODE': PermissibleValue(text='NODE', description='a slot with this role connects a symmetric relationship to a node that represents either subject or object node', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OTHER_ROLE': PermissibleValue(text='OTHER_ROLE', description='a slot with this role connects a relationship to a node that is not subject/object/predicate', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'alias_predicate_enum': EnumDefinition(name='alias_predicate_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='permissible values for the relationship between an element and an alias', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'EXACT_SYNONYM': PermissibleValue(text='EXACT_SYNONYM', description=None, meaning='skos:exactMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RELATED_SYNONYM': PermissibleValue(text='RELATED_SYNONYM', description=None, meaning='skos:relatedMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'BROAD_SYNONYM': PermissibleValue(text='BROAD_SYNONYM', description=None, meaning='skos:broaderMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NARROW_SYNONYM': PermissibleValue(text='NARROW_SYNONYM', description=None, meaning='skos:narrowerMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'obligation_level_enum': EnumDefinition(name='obligation_level_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'REQUIRED': PermissibleValue(text='REQUIRED', description='The metadata element is required to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RECOMMENDED': PermissibleValue(text='RECOMMENDED', description='The metadata element is recommended to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ENCOURAGED'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OPTIONAL': PermissibleValue(text='OPTIONAL', description='The metadata element is optional to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'EXAMPLE': PermissibleValue(text='EXAMPLE', description='The metadata element is an example of how to use the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'DISCOURAGED': PermissibleValue(text='DISCOURAGED', description='The metadata element is allowed but discouraged to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}, slots={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_name', 'https://linkml.io/linkml/faq/modeling.html#why-are-my-class-names-translated-to-camelcase'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['short name', 'unique name'], structured_aliases={}, mappings=[], exact_mappings=['schema:name'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'title': SlotDefinition(name='title', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A concise human-readable display label for the element. The title should mirror the name, and should use ordinary textual punctuation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['long name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:title', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'conforms_to': SlotDefinition(name='conforms_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An established standard to which the element conforms.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:implements'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:conformsTo', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implements': SlotDefinition(name='implements', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element conforms to. The referenced element is not imported into the schema for the implementing element. However, the referenced schema may be used to check conformance of the implementing element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'instantiates': SlotDefinition(name='instantiates', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element instantiates.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Controlled terms used to categorize an element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if you wish to use uncontrolled terms or terms that lack identifiers then use the keywords element'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='category', domain=None, slot_uri='dcterms:subject', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'structured_alias'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'keywords': SlotDefinition(name='keywords', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Keywords or tags used to describe the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='keyword', domain='element', slot_uri='schema:keywords', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'definition_uri': SlotDefinition(name='definition_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The native URI of the element. This is always within the namespace of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Formed by combining the default_prefix with the normalized element name'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:class_uri', 'linkml:slot_uri'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='filled in by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes': SlotDefinition(name='id_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An allowed list of prefixes for which identifiers must conform. The identifier of this class or slot must begin with the URIs referenced by this prefix', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Order of elements may be used to indicate priority order', 'If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by `:` (_should_ start if the list is open)', 'If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix (_should_ start if the list is open)'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml-model/issues/28'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes_are_closed': SlotDefinition(name='id_prefixes_are_closed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true, then the id_prefixes slot is treated as being closed, and any use of an id that does not have this prefix is considered a violation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/194'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'description': SlotDefinition(name='description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="a textual description of the element's purpose and use", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['definition'], structured_aliases={}, mappings=[], exact_mappings=['dcterms:description', 'schema:description'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:definition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_aliases': SlotDefinition(name='structured_aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of structured_alias objects, used to provide aliases in conjunction with additional metadata.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:aliases'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skosxl:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='structured_alias', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aliases': SlotDefinition(name='aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Alternate names/labels for the element. These do not alter the semantics of the schema, but may be useful to support search and alignment.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['not be confused with the metaslot alias.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['synonyms', 'alternate names', 'alternative labels', 'designations'], structured_aliases={}, mappings=[], exact_mappings=['schema:alternateName'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated': SlotDefinition(name='deprecated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Description of why and when this element will no longer be used', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note that linkml does not use a boolean to indicate deprecation status - the presence of a string value in this field is sufficient to indicate deprecation.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:deprecated'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'todos': SlotDefinition(name='todos', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Outstanding issues that needs resolution', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'notes': SlotDefinition(name='notes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='editorial notes about an element intended primarily for internal consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:editorialNote', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'comments': SlotDefinition(name='comments', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='notes and comments about an element intended primarily for external consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['rdfs:comment'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:note', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_subset': SlotDefinition(name='in_subset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='used to indicate membership of a term in a defined subset of terms used for a particular domain or application.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of use in the translator_minimal subset in the biolink model, holding the minimal set of predicates used in a translator knowledge graph'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='OIO:inSubset', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'from_schema': SlotDefinition(name='from_schema', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='id of the schema that defined the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["A stronger model would be range schema_definition, but this doesn't address the import model"], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:inScheme', array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imported_from': SlotDefinition(name='imported_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the imports entry that this element was derived from. Empty means primary source', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'see_also': SlotDefinition(name='see_also', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of related entities or URLs that may be of relevance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:seeAlso', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owned_by': SlotDefinition(name='owned_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that owns or is the steward of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['steward', 'owner'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:isDefinedBy'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_by': SlotDefinition(name='created_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that created the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'contributors': SlotDefinition(name='contributors', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that contributed to the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:contributor', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_on': SlotDefinition(name='created_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was created', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'last_updated_on': SlotDefinition(name='last_updated_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was last updated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:lastUpdatedOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'modified_by': SlotDefinition(name='modified_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that modified the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='oslc:modifiedBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'status': SlotDefinition(name='status', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='status of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bibo:draft', description=None, object=None)], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://www.hl7.org/fhir/valueset-publication-status.html', 'https://www.hl7.org/fhir/versions.html#std-process'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['workflow status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='bibo:status', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'literal_form': SlotDefinition(name='literal_form', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The literal lexical form of a structured alias; i.e the actual alias value.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alias_name', 'string_value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='skosxl:literalForm', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_predicate': SlotDefinition(name='alias_predicate', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The relationship between an element and its alias.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='rdf:predicate', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='predicate', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alias_predicate_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_contexts': SlotDefinition(name='alias_contexts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The context in which an alias should be applied', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='contexts', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_language': SlotDefinition(name='in_language', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.rfc-editor.org/rfc/bcp/bcp47.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='the primary language used in the sources', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Recommended to use a string from IETF BCP 47'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='schema:inLanguage', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source': SlotDefinition(name='source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A related resource from which the element is derived.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The described resource may be derived from the related resource in whole or in part'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['origin', 'derived from'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['prov:wasDerivedFrom', 'schema:isBasedOn'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:source', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'publisher': SlotDefinition(name='publisher', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An entity responsible for making the resource available', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:publisher', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class or slot from which inheritable metaslots are propagated from. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abstract': SlotDefinition(name='abstract', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot cannot be directly instantiated and is intended for grouping purposes.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixin': SlotDefinition(name='mixin', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot is intended to be inherited from without being an is_a parent. mixins should not be inherited from using is_a, except by other mixins.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['trait'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent classes or slots from which inheritable metaslots are propagated from.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierarchy, while keeping the benefits of multiple inheritance'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['traits'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class.", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'values_from': SlotDefinition(name='values_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The identifier of a "value set" -- a set of identifiers that form the possible values for the range of a slot. Note: this is different than \'subproperty_of\' in that \'subproperty_of\' is intended to be a single ontology term while \'values_from\' is the identifier of an entire value set. Additionally, this is different than an enumeration in that in an enumeration, the values of the enumeration are listed directly in the model itself. Setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set': SlotDefinition(name='code_set', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the identifier of an enumeration code set.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_version': SlotDefinition(name='code_set_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version identifier of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['we assume that version identifiers lexically sort in temporal order. Recommend semver when possible'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_tag': SlotDefinition(name='code_set_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version tag of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['enum_expression cannot have both a code_set_tag and a code_set_version'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pv_formula': SlotDefinition(name='pv_formula', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Defines the specific formula to be used to generate the permissible values.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['you cannot have BOTH the permissible_values and permissible_value_formula tag', 'code_set must be supplied for this to be valid'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pv_formula_options', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'permissible_values': SlotDefinition(name='permissible_values', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of possible values for a slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['coded values'], structured_aliases={}, mappings=[], exact_mappings=['cdisc:PermissibleValue'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_uri': SlotDefinition(name='enum_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the enum that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include': SlotDefinition(name='include', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be included, after subtracting the minus set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minus': SlotDefinition(name='minus', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be subtracted from the enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherits': SlotDefinition(name='inherits', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum definition that is used as the basis to create a new enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['All permissible values for all inherited enums are copied to form the initial seed set'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'matches': SlotDefinition(name='matches', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a match query that is used to calculate the list of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='match_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier_pattern': SlotDefinition(name='identifier_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A regular expression that is used to obtain a set of identifiers from a source_ontology to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='match_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'concepts': SlotDefinition(name='concepts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of identifiers that are used to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reachable_from': SlotDefinition(name='reachable_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a query for obtaining a list of permissible values based on graph reachability', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='reachability_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_ontology': SlotDefinition(name='source_ontology', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An ontology or vocabulary or terminology that is used in a query to obtain a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['examples include schema.org, wikidata, or an OBO ontology', 'for obo ontologies we recommend CURIEs of the form obo:cl, obo:envo, etc'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['terminology', 'vocabulary'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_direct': SlotDefinition(name='is_direct', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the reachability query should only include directly related nodes, if False then include also transitively connected', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['non-transitive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse_up': SlotDefinition(name='traverse_up', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the direction of the reachability query is reversed and ancestors are retrieved', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestors'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include_self': SlotDefinition(name='include_self', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the query is reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reflexive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relationship_types': SlotDefinition(name='relationship_types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of relationship types (properties) that are used in a reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['predicates', 'properties'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_nodes': SlotDefinition(name='source_nodes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of nodes that are used in the reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'text': SlotDefinition(name='text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The actual permissible value itself', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['there are no constraints on the text of the permissible value, but for many applications you may want to consider following idiomatic forms and using computer-friendly forms'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:notation'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'meaning': SlotDefinition(name='meaning', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value meaning of a permissible value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['we may want to change the range of this (and other) elements in the model to an entitydescription type construct'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/ISO/IEC_11179'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV meaning'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id': SlotDefinition(name='id', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The official schema URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'emit_prefixes': SlotDefinition(name='emit_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'version': SlotDefinition(name='version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='particular version of schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:schemaVersion'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='pav:version', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imports': SlotDefinition(name='imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of schemas that are to be included in this schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_imports': SlotDefinition(name='structured_imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of specifications for how to import elements from external schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='import_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'license': SlotDefinition(name='license', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='license for the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='dcterms:license', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_curi_maps': SlotDefinition(name='default_curi_maps', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_prefix': SlotDefinition(name='default_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix that is used for all elements within a schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='default_ns', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_range': SlotDefinition(name='default_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='default slot range to be used if range element is omitted from a slot definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subsets': SlotDefinition(name='subsets', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all subset definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['OIO:hasSubset'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'types': SlotDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all type definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enums': SlotDefinition(name='enums', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all enum definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_definitions': SlotDefinition(name='slot_definitions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all slot definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note the formal name of this element is slot_definitions, but it has alias slots, which is the canonical form used in yaml/json serializes of schemas.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='slots', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classes': SlotDefinition(name='classes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all class definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'metamodel_version': SlotDefinition(name='metamodel_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Version of the metamodel used to load the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file': SlotDefinition(name='source_file', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name, uri or description of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_date': SlotDefinition(name='source_file_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='modification date of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_size': SlotDefinition(name='source_file_size', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='size in bytes of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'generation_date': SlotDefinition(name='generation_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='date and time that the schema was loaded/generated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slots': SlotDefinition(name='slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='collection of slot names that are applicable to a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the list of applicable slots is inherited from parent classes', 'This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_usage': SlotDefinition(name='slot_usage', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the refinement of a slot in the context of the containing class definition.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_range': SlotDefinition(name='enum_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An inlined enumeration', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range_expression': SlotDefinition(name='range_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A range that is described as a boolean expression combining existing ranges', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['one use for this is being able to describe a range using any_of expressions, for example to combine two enums'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['path_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean_slot': SlotDefinition(name='boolean_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A grouping of slots that expression a boolean operator over a list of operands', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if at least one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:or'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=101, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if only one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:xone'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=103, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if none of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:not'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=105, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if all of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:and'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=107, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'preconditions': SlotDefinition(name='preconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold in order for the rule to be applicable to an instance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if', 'body', 'antecedents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=111, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:condition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'postconditions': SlotDefinition(name='postconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['then', 'head', 'consequents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=113, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elseconditions': SlotDefinition(name='elseconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions no not hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['else'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=115, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bidirectional': SlotDefinition(name='bidirectional', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in addition to preconditions entailing postconditions, the postconditions entail the preconditions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['iff', 'if and only if'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'open_world': SlotDefinition(name='open_world', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rank': SlotDefinition(name='rank', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the relative order in which the element occurs, lower values are given precedence', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the rank of an element does not affect the semantics'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['order', 'precedence', 'display order'], structured_aliases={}, mappings=[], exact_mappings=['qudt:order', 'qb:order'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:order', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'class_rule'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deactivated': SlotDefinition(name='deactivated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a deactivated rule is not executed by the rules engine', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:deactivated', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the collection of rules that apply to all members of this class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri='sh:rule', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classification_rules': SlotDefinition(name='classification_rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The collection of classification rules that apply to all members of this class. Classification rules allow for automatically assigning the instantiated type of an instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_conditions': SlotDefinition(name='slot_conditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='expresses constraints on a group of slots for a class expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'attributes': SlotDefinition(name='attributes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Inline definition of slots', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'class_uri': SlotDefinition(name='class_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning class_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subclass_of': SlotDefinition(name='subclass_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='DEPRECATED -- rdfs:subClassOf to be emitted in OWL generation', alt_descriptions={}, title=None, deprecated='Use is_a instead', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:subClassOf'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'defining_slots': SlotDefinition(name='defining_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that the domain element consists exactly of the members of the element in the range.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['this only applies in the OWL generation'], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tree_root': SlotDefinition(name='tree_root', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates that this is the Container class which forms the root of the serialized document structure in tree serializations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['each schema should have at most one tree root'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/intro/tutorial02.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_keys': SlotDefinition(name='unique_keys', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of named unique keys for this class. Unique keys may be singular or compound.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#unique-key'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:hasKey'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='unique_key', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_name': SlotDefinition(name='unique_key_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unique key', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'consider_nulls_inequal': SlotDefinition(name='consider_nulls_inequal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='By default, None values are considered equal for the purposes of comparisons in determining uniqueness. Set this to true to treat missing values as per ANSI-SQL NULLs, i.e NULL=NULL is always False.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_slots': SlotDefinition(name='unique_key_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='list of slot names that form a key. The tuple formed from the values of all these slots should be unique.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_names_unique': SlotDefinition(name='slot_names_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then induced/mangled slot names are not created for class_usage and attributes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain': SlotDefinition(name='domain', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the subject of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts that X is an instance of C1\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the object of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts Y is an instance of C2\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['range is underspecified, as not all elements can appear as the range of a slot.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value domain'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent='default_range', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['enum_binding', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_uri': SlotDefinition(name='slot_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the slot in a linked data context. The URI may come from any namespace and may be shared between schemas.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning slot_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='slot_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'multivalued': SlotDefinition(name='multivalued', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that slot can have more than one value and should be represented using a list or collection structure.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'array': SlotDefinition(name='array', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='coerces the value of the slot into an array and defines the dimensions of that array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='array_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dimensions': SlotDefinition(name='dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='definitions of each axis in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['axes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=True, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='dimension_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_number_dimensions': SlotDefinition(name='minimum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='minimum number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_number_dimensions': SlotDefinition(name='maximum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='maximum number of dimensions in the array, or False if explicitly no maximum. If this is unset, and an explicit list of dimensions are passed using dimensions, then this is interpreted as a closed list and the maximum_number_dimensions is the length of the dimensions list, unless this value is set to False', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_number_dimensions cannot be less than minimum_number_dimensions'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])], all_of=[]), 'exact_number_dimensions': SlotDefinition(name='exact_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='exact number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_number_dimensions is set, then minimum_number_dimensions and maximum_number_dimensions must be unset or have the same value'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherited': SlotDefinition(name='inherited', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the *value* of a slot is inherited by subclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only', 'Inherited applies to slot values. Parent *slots* are always inherited by subclasses'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'readonly': SlotDefinition(name='readonly', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If present, slot is read only. Text explains why', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ifabsent': SlotDefinition(name='ifabsent', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='function that provides a default value for the slot.\n * [Tt]rue -- boolean True\n * [Ff]alse -- boolean False\n * bnode -- blank node identifier\n * class_curie -- CURIE for the containing class\n * class_uri -- URI for the containing class\n * default_ns -- schema default namespace\n * default_range -- schema default range\n * int(value) -- integer value\n * slot_uri -- URI for the slot\n * slot_curie -- CURIE for the slot\n * string(value) -- string value\n * EnumName(PermissibleValue) -- enum value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:equals_expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:defaultValue'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implicit_prefix': SlotDefinition(name='implicit_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Causes the slot value to be interpreted as a uriorcurie after prefixing with this string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_specification_constant': SlotDefinition(name='value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain the a slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_value_specification_constant': SlotDefinition(name='list_value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_presence': SlotDefinition(name='value_presence', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if PRESENT then a value must be present (for lists there must be at least one value). If ABSENT then a value must be absent (for lists, must be empty)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='presence_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string': SlotDefinition(name='equals_string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number': SlotDefinition(name='equals_number', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range of a number and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_expression': SlotDefinition(name='equals_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot must equal the value of the evaluated expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["for example, a 'length' slot may have an equals_expression with value '(end-start)+1'"], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/developers/inference.html', 'https://linkml.io/linkml/schemas/advanced.html#equals-expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact_cardinality': SlotDefinition(name='exact_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the exact number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_cardinality is set, then minimum_cardinalty and maximum_cardinality must be unset or have the same value'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_cardinality': SlotDefinition(name='minimum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the minimum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_cardinality': SlotDefinition(name='maximum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the maximum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_cardinality cannot be less than minimum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string_in': SlotDefinition(name='equals_string_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number_in': SlotDefinition(name='equals_number_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range number and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_member': SlotDefinition(name='has_member', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with at least one member satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_members': SlotDefinition(name='all_members', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with all members satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'singular_name': SlotDefinition(name='singular_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name that is used in the singular form', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this may be used in some schema translations where use of a singular form is idiomatic, for example RDF'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:altLabel'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'required': SlotDefinition(name='required', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot must be present in instances of the class definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'recommended': SlotDefinition(name='recommended', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot should be present in instances of the class definition, but this is not required', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['This is to be used where not all data is expected to conform to having a required field', 'If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/177'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inapplicable': SlotDefinition(name='inapplicable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that values for this slot must not be present', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['By default all slots are applicable. The main use case for this slot is as an override in a subclass'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined': SlotDefinition(name='inlined', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['classes without keys or identifiers are necessarily inlined as lists', 'only applicable in tree-like serializations, e.g json, yaml'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_list': SlotDefinition(name='inlined_as_list', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The default loader will accept either list or dictionary form as input. This parameter controls internal\nrepresentation and output.', 'A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key\nis the key or identifier and whose value is the one additional element. This form is still stored according\nto the inlined_as_list setting.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_simple_dict': SlotDefinition(name='inlined_as_simple_dict', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a simple dict whose values are all atoms', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=28, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_ordered': SlotDefinition(name='list_elements_ordered', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the order of elements of a multivalued slot is guaranteed to be preserved. If False, the order may still be preserved but this is not guaranteed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_unique': SlotDefinition(name='list_elements_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then there must be no duplicates in the elements of a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shared': SlotDefinition(name='shared', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the relationship between the slot domain and range is many to one or many to many', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inverse functional', 'many to one or many'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'key': SlotDefinition(name='key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identify the elements within a single container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['key is inherited', 'a given domain can have at most one key slot (restriction to be removed in the future)', 'identifiers and keys are mutually exclusive. A given domain cannot have both', 'a key slot is automatically required. Keys cannot be optional'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier': SlotDefinition(name='identifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identifies the elements. There can be at most one identifier or key per container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['identifier is inherited', 'a key slot is automatically required. Identifiers cannot be optional', 'a given domain can have at most one identifier', 'identifiers and keys are mutually exclusive. A given domain cannot have both'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Identifier', 'linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary key', 'ID', 'UID', 'code'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'designates_type': SlotDefinition(name='designates_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/type-designators.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['type designator'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias': SlotDefinition(name='alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of alias is used within this metamodel, slot_definitions is aliases as slots', 'not to be confused with aliases, which indicates a set of terms to be used for search purposes.'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='skos:prefLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owner': SlotDefinition(name='owner', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the "owner" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot', alt_descriptions={}, title=None, deprecated='Will be replaced by domain_of and eventually removed', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by loader -- either class domain or slot domain', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain_of': SlotDefinition(name='domain_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the class(es) that reference the slot in a "slots" or "slot_usage" context', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:domainIncludes', 'SIO:000011'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_usage_slot': SlotDefinition(name='is_usage_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that this slot was defined in a slot_usage situation', alt_descriptions={}, title=None, deprecated='Replaced by usage_slot_name', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'usage_slot_name': SlotDefinition(name='usage_slot_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of the slot referenced in the slot_usage', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subproperty_of': SlotDefinition(name='subproperty_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Ontology property which this slot is a subproperty of. Note: setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='RO:HOM0000001', description='this is the RO term for "in homology relationship with", and used as a value of subproperty of this means that any ontological child (related to RO:HOM0000001 via an is_a relationship), is a valid value for the slot that declares this with the subproperty_of tag. This differs from the \'values_from\' meta model component in that \'values_from\' requires the id of a value set (said another way, if an entire ontology had a curie/identifier that was the identifier for the entire ontology, then that identifier would be used in \'values_from.\')', object=None)], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='rdfs:subPropertyOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'children_are_mutually_disjoint': SlotDefinition(name='children_are_mutually_disjoint', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true then all direct is_a children are mutually disjoint and share no instances in common', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_logical_characteristic': SlotDefinition(name='relational_logical_characteristic', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract grouping for metaslots that describe logical properties of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symmetric': SlotDefinition(name='symmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is symmetric, and i.s=v, then v.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:SymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asymmetric': SlotDefinition(name='asymmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['asymmetry is the combination of antisymmetry and irreflexivity'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:AsymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive': SlotDefinition(name='reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is reflexive, then i.s=i for all instances i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:ReflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'irreflexive': SlotDefinition(name='irreflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is irreflexive, then there exists no i such i.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:IrreflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'locally_reflexive': SlotDefinition(name='locally_reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is locally_reflexive, then i.s=i for all instances i where s is a class slot for the type of i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive': SlotDefinition(name='transitive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is transitive, and i.s=z, and s.s=j, then i.s=j', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:TransitiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive_form_of': SlotDefinition(name='transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Example: ancestor_of is the transitive_form_of parent_of'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive_transitive_form_of': SlotDefinition(name='reflexive_transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='transitive_form_of including the reflexive case', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='transitive_form_of', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inverse': SlotDefinition(name='inverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="indicates that any instance of d s r implies that there is also an instance of r s' d", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='owl:inverseOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_class_field': SlotDefinition(name='is_class_field', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that for any instance, i, the domain of this slot will include an assertion of i s range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'role': SlotDefinition(name='role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a textual descriptor that indicates the role played by the slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the primary use case for this slot is to provide a textual descriptor of a generic slot name when used in the context of a more specific class'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_value': SlotDefinition(name='minimum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or higher than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['low value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_value': SlotDefinition(name='maximum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or lower than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['high value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'interpolated': SlotDefinition(name='interpolated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then the pattern is first string interpolated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'partial_match': SlotDefinition(name='partial_match', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if not true then the pattern must match the whole string, as if enclosed in ^...$', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pattern': SlotDefinition(name='pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'syntax': SlotDefinition(name='syntax', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string. May be interpolated.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_pattern': SlotDefinition(name='structured_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to the regular expression in the pattern expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#structured-patterns'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pattern_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'string_serialization': SlotDefinition(name='string_serialization', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots.\nWe call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion.\nImplementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects\nFor example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/issues/128'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'type_mapping'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bindings': SlotDefinition(name='bindings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of enum bindings that specify how a slot can be bound to a permissible value from an enumeration.\nLinkML provides enums to allow string values to be restricted to one of a set of permissible values (specified statically or dynamically).\nEnum bindings allow enums to be bound to any object, including complex nested objects. For example, given a (generic) class Concept with slots id and label, it may be desirable to restrict the values the id takes on in a given context. For example, a HumanSample class may have a slot for representing sample site, with a range of concept, but the values of that slot may be restricted to concepts from a particular branch of an anatomy ontology.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_binding', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'binds_value_of': SlotDefinition(name='binds_value_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A path to a slot that is being bound to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_binding', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'obligation_level': SlotDefinition(name='obligation_level', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='obligation_level_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_mappings': SlotDefinition(name='type_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="A collection of type mappings that specify how a slot's range should be mapped or serialized in different frameworks", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_mapping', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'framework_key': SlotDefinition(name='framework_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of a format that can be used to serialize LinkML data. The string value should be a code from the LinkML frameworks vocabulary, but this is not strictly enforced', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='framework', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mapped_type': SlotDefinition(name='mapped_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='type to coerce to', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='type', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'typeof': SlotDefinition(name='typeof', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A parent type from which type properties are inherited', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the target type definition of the typeof slot is referred to as the "parent type"', 'the type definition containing the typeof slot is referred to as the "child type"', 'type definitions without a typeof slot are referred to as a "root type"'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'base': SlotDefinition(name='base', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='python base type in the LinkML runtime that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['every root type must have a base', 'the base is inherited by child types but may be overridden. Base compatibility is not checked.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_uri': SlotDefinition(name='type_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The uri that defines the possible values for the type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps)", 'every root type must have a type uri'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='uri', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'repr': SlotDefinition(name='repr', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name of the python object that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_text': SlotDefinition(name='alt_description_text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='text of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_source': SlotDefinition(name='alt_description_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the source of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='source', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_descriptions': SlotDefinition(name='alt_descriptions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A sourced alternative description for an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alternate definitions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alt_description', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value': SlotDefinition(name='value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri='skos:example', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_description': SlotDefinition(name='value_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='description of what the value is doing', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_object': SlotDefinition(name='value_object', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='direct object representation of the example', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='object', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'examples': SlotDefinition(name='examples', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example usages of an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['vann:example'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='example', domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='example', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_prefix': SlotDefinition(name='prefix_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix components of a prefix expansions. This is the part that appears before the colon in a CURIE.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:prefix', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_reference': SlotDefinition(name='prefix_reference', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The namespace to which a prefix expands to.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:namespace', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefixes': SlotDefinition(name='prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of prefix expansions that specify how CURIEs can be expanded to URIs', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='sh:declare', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='prefix', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_key': SlotDefinition(name='setting_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the variable name for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_value': SlotDefinition(name='setting_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The value assigned for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'settings': SlotDefinition(name='settings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of global variable settings', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['global variables are used in string interpolation in structured patterns'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['constants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_from': SlotDefinition(name='import_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_as': SlotDefinition(name='import_as', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_map': SlotDefinition(name='import_map', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_source': SlotDefinition(name='local_name_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the ncname of the source of the name', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_value': SlotDefinition(name='local_name_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name assigned to an element in a given ontology', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_names': SlotDefinition(name='local_names', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='local_name', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_group': SlotDefinition(name='slot_group', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='allows for grouping of related slots into a grouping slot that serves the role of a group', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['slot groups do not change the semantics of a model but are a useful way of visually grouping related slots'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='sh:group', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression='True', exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this slot is a grouping slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:PropertyGroup'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in a sequential list, this indicates the next member', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reversed': SlotDefinition(name='reversed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if the slot is to be inversed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse': SlotDefinition(name='traverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot to traverse', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'path_rule': SlotDefinition(name='path_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'represents_relationship': SlotDefinition(name='represents_relationship', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this class represents a relationship rather than an entity', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond', 'in the context of RDF, this should be used when instances of the class are `rdf:Statement`s', 'in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['rdf:Statement', 'https://patterns.dataincubator.org/book/qualified-relation.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['is_reified'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_role': SlotDefinition(name='relational_role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the role a slot on a relationship class plays, for example, the subject, object or predicate roles', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this should only be used on slots that are applicable to class that represent relationships', 'in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary', 'in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reification_role'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='relational_role_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'Anything': ClassDefinition(name='Anything', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri='linkml:Any', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'common_metadata': ClassDefinition(name='common_metadata', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Generic metadata shared across definitions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['description', 'alt_descriptions', 'title', 'deprecated', 'todos', 'notes', 'comments', 'examples', 'in_subset', 'from_schema', 'imported_from', 'source', 'in_language', 'see_also', 'deprecated element has exact replacement', 'deprecated element has possible replacement', 'aliases', 'structured_aliases', 'mappings', 'exact mappings', 'close mappings', 'related mappings', 'narrow mappings', 'broad mappings', 'created_by', 'contributors', 'created_on', 'last_updated_on', 'modified_by', 'status', 'rank', 'categories', 'keywords'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'element': ClassDefinition(name='element', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A named element in the model', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data element', 'object'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['name', 'id_prefixes', 'id_prefixes_are_closed', 'definition_uri', 'local_names', 'conforms_to', 'implements', 'instantiates'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'schema_definition': ClassDefinition(name='schema_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of definitions that make up a schema or a data model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_dictionary'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data dictionary', 'data model', 'information model', 'logical model', 'schema', 'model'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['qb:ComponentSet', 'owl:Ontology'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'version', 'imports', 'license', 'prefixes', 'emit_prefixes', 'default_curi_maps', 'default_prefix', 'default_range', 'subsets', 'types', 'enums', 'slot_definitions', 'classes', 'metamodel_version', 'source_file', 'source_file_date', 'source_file_size', 'generation_date', 'slot_names_unique', 'settings', 'bindings'], slot_usage={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a unique name for the schema that is both human-readable and consists of only characters from the NCName set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=True, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_expression': ClassDefinition(name='type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract class grouping named types and anonymous type expressions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'equals_string', 'equals_string_in', 'equals_number', 'minimum_value', 'maximum_value', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_type_expression': ClassDefinition(name='anonymous_type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A type expression that is not a top-level named type definition. Used for nesting.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_definition': ClassDefinition(name='type_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that whose instances are atomic scalar values that can be mapped to primitive types', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['typeof', 'base', 'type_uri', 'repr', 'union_of'], slot_usage={'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'subset_definition': ClassDefinition(name='subset_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that can be used to group other metamodel elements', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'definition': ClassDefinition(name='definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='abstract base class for core metaclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_definition'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='element', abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['is_a', 'abstract', 'mixin', 'mixins', 'apply_to', 'values_from', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_expression': ClassDefinition(name='enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that constrains the range of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['code_set', 'code_set_tag', 'code_set_version', 'pv_formula', 'permissible_values', 'include', 'minus', 'inherits', 'reachable_from', 'matches', 'concepts'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_enum_expression': ClassDefinition(name='anonymous_enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum_expression that is not named', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_definition': ClassDefinition(name='enum_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances must be drawn from a specified set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['enum', 'enumeration', 'semantic enumeration', 'value set', 'term set', 'concept set', 'code set', 'Terminology Value Set', 'answer list', 'value domain'], structured_aliases={}, mappings=[], exact_mappings=['qb:HierarchicalCodeList', 'NCIT:C113497', 'cdisc:ValueDomain'], close_mappings=['skos:ConceptScheme'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['enum_uri'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_binding': ClassDefinition(name='enum_binding', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binding of a slot or a class to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'obligation_level', 'binds_value_of', 'pv_formula'], slot_usage={'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'match_query': ClassDefinition(name='match_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissivle values via a query that matches on properties of the external concepts.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['identifier_pattern', 'source_ontology'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'reachability_query': ClassDefinition(name='reachability_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissible values via walking from a set of source nodes to a set of descendants or ancestors over a set of relationship types.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['source_ontology', 'source_nodes', 'relationship_types', 'is_direct', 'include_self', 'traverse_up'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'structured_alias': ClassDefinition(name='structured_alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='object that contains meta data about a synonym or alias including where it came from (source) and its scope (narrow, broad, etc.)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['literal_form', 'alias_predicate', 'categories', 'alias_contexts'], slot_usage={'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The category or categories of an alias. This can be drawn from any relevant vocabulary', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://w3id.org/mod#acronym', description='An acronym', object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='skosxl:Label', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'expression': ClassDefinition(name='expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='general mixin for any class that can represent some form of expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_expression': ClassDefinition(name='anonymous_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract parent class for any nested expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['anonymous expressions are useful for when it is necessary to build a complex expression without introducing a named element for each sub-expression'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'path_expression': ClassDefinition(name='path_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that describes an abstract path from an object to another through a sequence of slot lookups', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['followed_by', 'none_of', 'any_of', 'all_of', 'exactly_one_of', 'reversed', 'traverse', 'range_expression'], slot_usage={'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_expression': ClassDefinition(name='slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that constrains the range of values a slot can take', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'range_expression', 'enum_range', 'bindings', 'required', 'recommended', 'multivalued', 'inlined', 'inlined_as_list', 'minimum_value', 'maximum_value', 'pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'value_presence', 'equals_string', 'equals_string_in', 'equals_number', 'equals_expression', 'exact_cardinality', 'minimum_cardinality', 'maximum_cardinality', 'has_member', 'all_members', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_slot_expression': ClassDefinition(name='anonymous_slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_definition': ClassDefinition(name='slot_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that describes how instances are related to other instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['slot', 'field', 'property', 'attribute', 'column', 'variable'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdf:Property', 'qb:ComponentProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['singular_name', 'domain', 'slot_uri', 'array', 'inherited', 'readonly', 'ifabsent', 'list_elements_unique', 'list_elements_ordered', 'shared', 'key', 'identifier', 'designates_type', 'alias', 'owner', 'domain_of', 'subproperty_of', 'symmetric', 'reflexive', 'locally_reflexive', 'irreflexive', 'asymmetric', 'transitive', 'inverse', 'is_class_field', 'transitive_form_of', 'reflexive_transitive_form_of', 'role', 'is_usage_slot', 'usage_slot_name', 'relational_role', 'slot_group', 'is_grouping_slot', 'path_rule', 'disjoint_with', 'children_are_mutually_disjoint', 'union_of', 'type_mappings'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent slot from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin slots from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_expression': ClassDefinition(name='class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A boolean expression that can be used to dynamically determine membership of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['any_of', 'exactly_one_of', 'none_of', 'all_of', 'slot_conditions'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_class_expression': ClassDefinition(name='anonymous_class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['is_a'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_definition': ClassDefinition(name='class_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances are complex objects that may have slot-value assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['table', 'record', 'template', 'message', 'observation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:Class'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['slots', 'slot_usage', 'attributes', 'class_uri', 'subclass_of', 'union_of', 'defining_slots', 'tree_root', 'unique_keys', 'rules', 'classification_rules', 'slot_names_unique', 'represents_relationship', 'disjoint_with', 'children_are_mutually_disjoint'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin classes from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_level_rule': ClassDefinition(name='class_level_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that is applied to classes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_rule': ClassDefinition(name='class_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that applies to instances of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if rule'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:TripleRule', 'swrl:Imp'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='class_level_rule', abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['preconditions', 'postconditions', 'elseconditions', 'bidirectional', 'open_world', 'rank', 'deactivated'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'array_expression': ClassDefinition(name='array_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['exact_number_dimensions', 'minimum_number_dimensions', 'maximum_number_dimensions', 'dimensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'dimension_expression': ClassDefinition(name='dimension_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines one of the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['alias', 'maximum_cardinality', 'minimum_cardinality', 'exact_cardinality'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'pattern_expression': ClassDefinition(name='pattern_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a regular expression pattern used to evaluate conformance of a string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['syntax', 'interpolated', 'partial_match'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'import_expression': ClassDefinition(name='import_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression describing an import', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['import_from', 'import_as', 'import_map'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'setting': ClassDefinition(name='setting', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='assignment of a key to a value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['setting_key', 'setting_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'prefix': ClassDefinition(name='prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='prefix URI tuple', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['prefix_prefix', 'prefix_reference'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'local_name': ClassDefinition(name='local_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed label', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['local_name_source', 'local_name_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'example': ClassDefinition(name='example', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='usage example and description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['value', 'value_description', 'value_object'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'alt_description': ClassDefinition(name='alt_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['structured description'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['alt_description_source', 'alt_description_text'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'permissible_value': ClassDefinition(name='permissible_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a permissible value, accompanied by intended text and an optional mapping to a concept URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:Concept'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['text', 'description', 'meaning', 'unit', 'instantiates', 'implements', 'is_a', 'mixins'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'unique_key': ClassDefinition(name='unique_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of slots whose values uniquely identify an instance of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['unique_key_name', 'unique_key_slots', 'consider_nulls_inequal'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_mapping': ClassDefinition(name='type_mapping', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Represents how a slot or type can be serialized to a format.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['framework_key', 'mapped_type', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file=None, source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:units': SchemaDefinition(name='units', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Units datamodel', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/units', version=None, imports=['linkml:types', 'linkml:extensions', 'linkml:annotations', 'linkml:mappings'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'unit': SlotDefinition(name='unit', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an encoding of a unit', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:unit', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='UnitOfMeasure', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ucum_code': SlotDefinition(name='ucum_code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='associates a QUDT unit with its UCUM code (case-sensitive).', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='UnitOfMeasure', slot_uri='qudt:ucumCode', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'derivation': SlotDefinition(name='derivation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Expression for deriving this unit from other units', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_quantity_kind': SlotDefinition(name='has_quantity_kind', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Concept in a vocabulary or ontology that denotes the kind of quantity being measured, e.g. length', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Potential ontologies include but are not limited to PATO, NCIT, OBOE, qudt.quantityKind'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:hasQuantityKind', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'iec61360code': SlotDefinition(name='iec61360code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:iec61360Code', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symbol': SlotDefinition(name='symbol', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unit encoded as a symbol', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:symbol', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abbreviation': SlotDefinition(name='abbreviation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abbreviation for a unit is a short ASCII string that is used in place of the full name for the unit in contexts where non-ASCII characters would be problematic, or where using the abbreviation will enhance readability. When a power of a base unit needs to be expressed, such as squares this can be done using abbreviations rather than symbols (source: qudt)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:abbreviation', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'descriptive_name': SlotDefinition(name='descriptive_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the spelled out name of the unit, for example, meter', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'UnitOfMeasure': ClassDefinition(name='UnitOfMeasure', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A unit of measure, or unit, is a particular quantity value that has been chosen as a scale for measuring other quantities the same kind (more generally of equivalent dimension).', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['symbol', 'abbreviation', 'descriptive_name', 'exact mappings', 'ucum_code', 'derivation', 'has_quantity_kind', 'iec61360code'], slot_usage={'exact mappings': SlotDefinition(name='exact mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used to link a unit to equivalent concepts in ontologies such as UO, SNOMED, OEM, OBOE, NCIT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Do not use this to encode mappings to systems for which a dedicated field exists'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='qudt:Unit', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'ucum_code': SlotDefinition(name='ucum_code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'iec61360code': SlotDefinition(name='iec61360code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'symbol': SlotDefinition(name='symbol', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'exact_mappings': SlotDefinition(name='exact_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])})], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/units.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:mappings': SchemaDefinition(name='mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='LinkML model for mappings', alt_descriptions={}, title='LinkML Schema Mappings', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/mappings', version='2.0.0', imports=['linkml:types'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'IAO': Prefix(prefix_prefix='IAO', prefix_reference='http://purl.obolibrary.org/obo/IAO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'OIO', 'IAO'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'mappings': SlotDefinition(name='mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['xrefs', 'identifiers', 'alternate identifiers', 'alternate ids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:mappingRelation', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact mappings': SlotDefinition(name='exact mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have identical meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:exactMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['UnitOfMeasure', 'common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'close mappings': SlotDefinition(name='close mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have close meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:closeMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'related mappings': SlotDefinition(name='related mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have related meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:relatedMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'narrow mappings': SlotDefinition(name='narrow mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have narrower meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:narrowMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'broad mappings': SlotDefinition(name='broad mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have broader meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:broadMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated element has exact replacement': SlotDefinition(name='deprecated element has exact replacement', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='When an element is deprecated, it can be automatically replaced by this uri or curie', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=['IAO:0100001'], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated element has possible replacement': SlotDefinition(name='deprecated element has possible replacement', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='When an element is deprecated, it can be potentially replaced by this uri or curie', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=['OIO:consider'], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/mappings.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:types': SchemaDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Shared type definitions for the core LinkML mode and metamodel', alt_descriptions={}, title='Core LinkML metamodel types', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/types', version=None, imports=[], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'xsd': Prefix(prefix_prefix='xsd', prefix_reference='http://www.w3.org/2001/XMLSchema#'), 'shex': Prefix(prefix_prefix='shex', prefix_reference='http://www.w3.org/ns/shex#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/')}, emit_prefixes=[], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={'string': TypeDefinition(name='string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A character string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['In RDF serializations, a slot with range of string is treated as a literal or type xsd:string. If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "string".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Text'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'integer': TypeDefinition(name='integer', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An integer', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "integer".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Integer'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='int', uri='xsd:integer', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean': TypeDefinition(name='boolean', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binary (true or false) value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "boolean".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Boolean'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Bool', uri='xsd:boolean', repr='bool', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'float': TypeDefinition(name='float', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:float specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "float".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Float'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='float', uri='xsd:float', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'double': TypeDefinition(name='double', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:double specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "double".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:Float'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='float', uri='xsd:double', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'decimal': TypeDefinition(name='decimal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number with arbitrary precision that conforms to the xsd:decimal specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "decimal".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=['schema:Number'], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Decimal', uri='xsd:decimal', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'time': TypeDefinition(name='time', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A time object represents a (local) time of day, independent of any particular day', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['URI is dateTime because OWL reasoners do not work with straight date or time', 'If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "time".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Time'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDTime', uri='xsd:time', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date': TypeDefinition(name='date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a date (year, month and day) in an idealized calendar', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["URI is dateTime because OWL reasoners don't work with straight date or time", 'If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "date".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Date'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDDate', uri='xsd:date', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'datetime': TypeDefinition(name='datetime', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of a date and time', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "datetime".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:DateTime'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDDateTime', uri='xsd:dateTime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date_or_datetime': TypeDefinition(name='date_or_datetime', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Either a date or a datetime', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "date_or_datetime".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='linkml:DateOrDatetime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uriorcurie': TypeDefinition(name='uriorcurie', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a URI or a CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "uriorcurie".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'curie': TypeDefinition(name='curie', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.w3.org/TR/curie/', implements=[], instantiates=[], extensions={}, annotations={}, description='a compact URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "curie".'], comments=['in RDF serializations this MUST be expanded to a URI', 'in non-RDF serializations MAY be serialized as the compact representation'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Curie', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uri': TypeDefinition(name='uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.ietf.org/rfc/rfc3987.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='a complete URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "uri".'], comments=['in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:URL'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='URI', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ncname': TypeDefinition(name='ncname', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Prefix part of CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "ncname".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='NCName', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'objectidentifier': TypeDefinition(name='objectidentifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A URI or CURIE that represents an object in the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "objectidentifier".'], comments=['Used for inheritance and type checking'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='ElementIdentifier', uri='shex:iri', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nodeidentifier': TypeDefinition(name='nodeidentifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A URI, CURIE or BNODE that represents a node in a model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "nodeidentifier".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='NodeIdentifier', uri='shex:nonLiteral', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'jsonpointer': TypeDefinition(name='jsonpointer', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://datatracker.ietf.org/doc/html/rfc6901', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "jsonpointer".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'jsonpath': TypeDefinition(name='jsonpath', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.ietf.org/archive/id/draft-goessner-dispatch-jsonpath-00.html', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "jsonpath".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sparqlpath': TypeDefinition(name='sparqlpath', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.w3.org/TR/sparql11-query/#propertypaths', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "sparqlpath".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, enums={}, slots={}, classes={}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/types.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:annotations': SchemaDefinition(name='annotations', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Annotations mixin', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/annotations', version='2.0.0', imports=['linkml:types', 'linkml:extensions'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'annotations': SlotDefinition(name='annotations', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of tag/text tuples with the semantics of OWL Annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='extensions', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='annotatable', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['annotatable', 'annotation'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='annotation', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'annotatable': ClassDefinition(name='annotatable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='mixin for classes that support annotations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['annotations'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'annotation': ClassDefinition(name='annotation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag/value pair with the semantics of OWL Annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], 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source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/annotations.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:extensions': SchemaDefinition(name='extensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Extension mixin', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/extensions', version='2.0.0', imports=['linkml:types'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'extensions': SlotDefinition(name='extensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag/text tuple attached to an arbitrary element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extensible', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['extension', 'extensible'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='extension', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'extension_tag': SlotDefinition(name='extension_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag associated with an extension', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extension', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='tag', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'extension_value': SlotDefinition(name='extension_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={'simple_dict_value': Annotation(tag='simple_dict_value', value=True, extensions={}, annotations={})}, description='the actual annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extension', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='value', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='AnyValue', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'AnyValue': ClassDefinition(name='AnyValue', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], 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slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'extensible': ClassDefinition(name='extensible', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='mixin for classes that support extension', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['extensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/extensions.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[])}, importmap={}, modifications=0, uuid='1fbd56e8-76b2-4776-affc-bd850cd8688b'), mappings={}, initial_metamodel_mappings={}, metamodel_mappings=defaultdict(, {'description': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#definition'), rdflib.term.URIRef('https://w3id.org/linkml/description'), rdflib.term.URIRef('http://purl.org/dc/terms/description'), rdflib.term.URIRef('http://schema.org/description')], 'is_a': [rdflib.term.URIRef('https://w3id.org/linkml/is_a'), rdflib.term.URIRef('https://w3id.org/linkml/is_a')], 'domain_of': [rdflib.term.URIRef('https://w3id.org/linkml/domain_of'), rdflib.term.URIRef('https://w3id.org/linkml/domain_of'), rdflib.term.URIRef('http://schema.org/domainIncludes'), rdflib.term.URIRef('http://semanticscience.org/resource/SIO_000011')], 'range': [rdflib.term.URIRef('https://w3id.org/linkml/range'), rdflib.term.URIRef('https://w3id.org/linkml/range')], 'exact_mappings': [rdflib.term.URIRef('http://www.w3.org/2002/07/owl#sameAs'), rdflib.term.URIRef('http://schema.org/sameAs')], 'ClassDefinition': [rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#Class'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Class'), rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#Concept')], 'SlotDefinition': [rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#Property'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ObjectProperty'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#DatatypeProperty'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AnnotationProperty')], 'AnyValue': [rdflib.term.URIRef('https://w3id.org/linkml/Any'), rdflib.term.URIRef('https://w3id.org/linkml/AnyValue')], 'extension': [rdflib.term.URIRef('https://w3id.org/linkml/Extension'), rdflib.term.URIRef('https://w3id.org/linkml/Extension')], 'extensible': [rdflib.term.URIRef('https://w3id.org/linkml/Extensible'), 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rdflib.term.URIRef('https://w3id.org/linkml/transitive_form_of')], 'reflexive_transitive_form_of': [rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of'), rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of')], 'inverse': [rdflib.term.URIRef('http://www.w3.org/2002/07/owl#inverseOf'), rdflib.term.URIRef('https://w3id.org/linkml/inverse')], 'is_class_field': [rdflib.term.URIRef('https://w3id.org/linkml/is_class_field'), rdflib.term.URIRef('https://w3id.org/linkml/is_class_field')], 'role': [rdflib.term.URIRef('https://w3id.org/linkml/role'), rdflib.term.URIRef('https://w3id.org/linkml/role')], 'minimum_value': [rdflib.term.URIRef('https://w3id.org/linkml/minimum_value'), rdflib.term.URIRef('https://w3id.org/linkml/minimum_value')], 'maximum_value': [rdflib.term.URIRef('https://w3id.org/linkml/maximum_value'), rdflib.term.URIRef('https://w3id.org/linkml/maximum_value')], 'interpolated': [rdflib.term.URIRef('https://w3id.org/linkml/interpolated'), rdflib.term.URIRef('https://w3id.org/linkml/interpolated')], 'partial_match': [rdflib.term.URIRef('https://w3id.org/linkml/partial_match'), rdflib.term.URIRef('https://w3id.org/linkml/partial_match')], 'pattern': [rdflib.term.URIRef('https://w3id.org/linkml/pattern'), rdflib.term.URIRef('https://w3id.org/linkml/pattern')], 'syntax': [rdflib.term.URIRef('https://w3id.org/linkml/syntax'), rdflib.term.URIRef('https://w3id.org/linkml/syntax')], 'structured_pattern': [rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern'), rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern')], 'string_serialization': [rdflib.term.URIRef('https://w3id.org/linkml/string_serialization'), rdflib.term.URIRef('https://w3id.org/linkml/string_serialization')], 'bindings': [rdflib.term.URIRef('https://w3id.org/linkml/bindings'), rdflib.term.URIRef('https://w3id.org/linkml/bindings')], 'binds_value_of': [rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of'), rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of')], 'obligation_level': [rdflib.term.URIRef('https://w3id.org/linkml/obligation_level'), rdflib.term.URIRef('https://w3id.org/linkml/obligation_level')], 'type_mappings': [rdflib.term.URIRef('https://w3id.org/linkml/type_mappings'), rdflib.term.URIRef('https://w3id.org/linkml/type_mappings')], 'framework_key': [rdflib.term.URIRef('https://w3id.org/linkml/framework_key'), rdflib.term.URIRef('https://w3id.org/linkml/framework_key')], 'mapped_type': [rdflib.term.URIRef('https://w3id.org/linkml/mapped_type'), rdflib.term.URIRef('https://w3id.org/linkml/mapped_type')], 'typeof': [rdflib.term.URIRef('https://w3id.org/linkml/typeof'), rdflib.term.URIRef('https://w3id.org/linkml/typeof')], 'base': [rdflib.term.URIRef('https://w3id.org/linkml/base'), rdflib.term.URIRef('https://w3id.org/linkml/base')], 'type_uri': [rdflib.term.URIRef('https://w3id.org/linkml/type_uri'), rdflib.term.URIRef('https://w3id.org/linkml/type_uri')], 'repr': [rdflib.term.URIRef('https://w3id.org/linkml/repr'), rdflib.term.URIRef('https://w3id.org/linkml/repr')], 'alt_description_text': [rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text'), rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text')], 'alt_description_source': [rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source'), rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source')], 'alt_descriptions': [rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions'), rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions')], 'value': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#example'), rdflib.term.URIRef('https://w3id.org/linkml/value')], 'value_description': [rdflib.term.URIRef('https://w3id.org/linkml/value_description'), rdflib.term.URIRef('https://w3id.org/linkml/value_description')], 'value_object': [rdflib.term.URIRef('https://w3id.org/linkml/value_object'), rdflib.term.URIRef('https://w3id.org/linkml/value_object')], 'examples': [rdflib.term.URIRef('https://w3id.org/linkml/examples'), rdflib.term.URIRef('https://w3id.org/linkml/examples'), rdflib.term.URIRef('https://vocab.org/vann/example')], 'prefix_prefix': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#prefix'), rdflib.term.URIRef('https://w3id.org/linkml/prefix_prefix')], 'prefix_reference': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#namespace'), rdflib.term.URIRef('https://w3id.org/linkml/prefix_reference')], 'prefixes': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#declare'), rdflib.term.URIRef('https://w3id.org/linkml/prefixes')], 'setting_key': [rdflib.term.URIRef('https://w3id.org/linkml/setting_key'), rdflib.term.URIRef('https://w3id.org/linkml/setting_key')], 'setting_value': [rdflib.term.URIRef('https://w3id.org/linkml/setting_value'), rdflib.term.URIRef('https://w3id.org/linkml/setting_value')], 'settings': [rdflib.term.URIRef('https://w3id.org/linkml/settings'), rdflib.term.URIRef('https://w3id.org/linkml/settings')], 'import_from': [rdflib.term.URIRef('https://w3id.org/linkml/import_from'), rdflib.term.URIRef('https://w3id.org/linkml/import_from')], 'import_as': [rdflib.term.URIRef('https://w3id.org/linkml/import_as'), rdflib.term.URIRef('https://w3id.org/linkml/import_as')], 'import_map': [rdflib.term.URIRef('https://w3id.org/linkml/import_map'), rdflib.term.URIRef('https://w3id.org/linkml/import_map')], 'local_name_source': [rdflib.term.URIRef('https://w3id.org/linkml/local_name_source'), rdflib.term.URIRef('https://w3id.org/linkml/local_name_source')], 'local_name_value': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#altLabel'), rdflib.term.URIRef('https://w3id.org/linkml/local_name_value')], 'local_names': [rdflib.term.URIRef('https://w3id.org/linkml/local_names'), rdflib.term.URIRef('https://w3id.org/linkml/local_names')], 'slot_group': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#group'), rdflib.term.URIRef('https://w3id.org/linkml/slot_group')], 'is_grouping_slot': [rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'), rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'), rdflib.term.URIRef('http://www.w3.org/ns/shacl#PropertyGroup')], 'followed_by': [rdflib.term.URIRef('https://w3id.org/linkml/followed_by'), rdflib.term.URIRef('https://w3id.org/linkml/followed_by')], 'reversed': [rdflib.term.URIRef('https://w3id.org/linkml/reversed'), rdflib.term.URIRef('https://w3id.org/linkml/reversed')], 'traverse': [rdflib.term.URIRef('https://w3id.org/linkml/traverse'), rdflib.term.URIRef('https://w3id.org/linkml/traverse')], 'path_rule': [rdflib.term.URIRef('https://w3id.org/linkml/path_rule'), rdflib.term.URIRef('https://w3id.org/linkml/path_rule')], 'represents_relationship': [rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship'), rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship')], 'relational_role': [rdflib.term.URIRef('https://w3id.org/linkml/relational_role'), rdflib.term.URIRef('https://w3id.org/linkml/relational_role')], 'pv_formula_options': [], 'presence_enum': [], 'relational_role_enum': [], 'alias_predicate_enum': [], 'obligation_level_enum': [], 'string': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/string'), rdflib.term.URIRef('http://schema.org/Text')], 'integer': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#integer'), rdflib.term.URIRef('https://w3id.org/linkml/integer'), rdflib.term.URIRef('http://schema.org/Integer')], 'boolean': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#boolean'), rdflib.term.URIRef('https://w3id.org/linkml/boolean'), rdflib.term.URIRef('http://schema.org/Boolean')], 'float': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#float'), rdflib.term.URIRef('https://w3id.org/linkml/float'), rdflib.term.URIRef('http://schema.org/Float')], 'double': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#double'), rdflib.term.URIRef('https://w3id.org/linkml/double'), rdflib.term.URIRef('http://schema.org/Float')], 'decimal': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#decimal'), rdflib.term.URIRef('https://w3id.org/linkml/decimal'), rdflib.term.URIRef('http://schema.org/Number')], 'time': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#time'), rdflib.term.URIRef('https://w3id.org/linkml/time'), rdflib.term.URIRef('http://schema.org/Time')], 'date': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#date'), rdflib.term.URIRef('https://w3id.org/linkml/date'), rdflib.term.URIRef('http://schema.org/Date')], 'datetime': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#dateTime'), rdflib.term.URIRef('https://w3id.org/linkml/datetime'), rdflib.term.URIRef('http://schema.org/DateTime')], 'date_or_datetime': [rdflib.term.URIRef('https://w3id.org/linkml/DateOrDatetime'), rdflib.term.URIRef('https://w3id.org/linkml/date_or_datetime')], 'uriorcurie': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'), rdflib.term.URIRef('https://w3id.org/linkml/uriorcurie')], 'curie': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/curie')], 'uri': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'), rdflib.term.URIRef('https://w3id.org/linkml/uri'), rdflib.term.URIRef('http://schema.org/URL')], 'ncname': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/ncname')], 'objectidentifier': [rdflib.term.URIRef('http://www.w3.org/ns/shex#iri'), rdflib.term.URIRef('https://w3id.org/linkml/objectidentifier')], 'nodeidentifier': [rdflib.term.URIRef('http://www.w3.org/ns/shex#nonLiteral'), rdflib.term.URIRef('https://w3id.org/linkml/nodeidentifier')], 'jsonpointer': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/jsonpointer')], 'jsonpath': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/jsonpath')], 'sparqlpath': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/sparqlpath')], 'MinimalSubset': [], 'BasicSubset': [], 'SpecificationSubset': [], 'RelationalModelProfile': [], 'ObjectOrientedProfile': [], 'OwlProfile': []}), reverse_metamodel_mappings=defaultdict(, {rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#comment'): ['description', 'comments'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#subClassOf'): ['is_a', 'subclass_of'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#broader'): ['is_a'], rdflib.term.URIRef('http://schema.org/domainIncludes'): ['domain_of', 'domain_of'], rdflib.term.URIRef('https://schema.org/domainIncludes'): ['domain_of'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#domain'): ['domain_of'], rdflib.term.URIRef('http://schema.org/rangeIncludes'): ['range'], rdflib.term.URIRef('https://schema.org/rangeIncludes'): ['range'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#range'): ['range'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#sameAs'): ['exact_mappings'], rdflib.term.URIRef('http://schema.org/sameAs'): ['exact_mappings'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#Class'): ['ClassDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Class'): ['ClassDefinition', 'class_definition'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#Concept'): ['ClassDefinition', 'permissible_value'], rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#Property'): ['SlotDefinition', 'slot_definition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ObjectProperty'): ['SlotDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#DatatypeProperty'): ['SlotDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AnnotationProperty'): ['SlotDefinition'], rdflib.term.URIRef('https://w3id.org/linkml/Any'): ['AnyValue', 'Anything'], rdflib.term.URIRef('https://w3id.org/linkml/AnyValue'): ['AnyValue'], rdflib.term.URIRef('https://w3id.org/linkml/Extension'): ['extension', 'extension'], rdflib.term.URIRef('https://w3id.org/linkml/Extensible'): ['extensible', 'extensible'], rdflib.term.URIRef('https://w3id.org/linkml/Annotatable'): ['annotatable', 'annotatable'], rdflib.term.URIRef('https://w3id.org/linkml/Annotation'): ['annotation', 'annotation'], rdflib.term.URIRef('http://qudt.org/schema/qudt/Unit'): ['UnitOfMeasure'], rdflib.term.URIRef('https://w3id.org/linkml/UnitOfMeasure'): ['UnitOfMeasure'], rdflib.term.URIRef('https://w3id.org/linkml/Anything'): ['Anything'], rdflib.term.URIRef('https://w3id.org/linkml/CommonMetadata'): ['common_metadata', 'common_metadata'], rdflib.term.URIRef('https://w3id.org/linkml/Element'): ['element', 'element'], rdflib.term.URIRef('https://w3id.org/linkml/SchemaDefinition'): ['schema_definition', 'schema_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#ComponentSet'): ['schema_definition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Ontology'): ['schema_definition'], rdflib.term.URIRef('https://w3id.org/linkml/TypeExpression'): ['type_expression', 'type_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousTypeExpression'): ['anonymous_type_expression', 'anonymous_type_expression'], rdflib.term.URIRef('https://w3id.org/linkml/TypeDefinition'): ['type_definition', 'type_definition'], rdflib.term.URIRef('https://w3id.org/linkml/SubsetDefinition'): ['subset_definition', 'subset_definition'], rdflib.term.URIRef('https://w3id.org/linkml/Definition'): ['definition', 'definition'], rdflib.term.URIRef('https://w3id.org/linkml/EnumExpression'): ['enum_expression', 'enum_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousEnumExpression'): ['anonymous_enum_expression', 'anonymous_enum_expression'], rdflib.term.URIRef('https://w3id.org/linkml/EnumDefinition'): ['enum_definition', 'enum_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#HierarchicalCodeList'): ['enum_definition'], rdflib.term.URIRef('http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C113497'): ['enum_definition'], rdflib.term.URIRef('http://rdf.cdisc.org/mms#ValueDomain'): ['enum_definition'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#ConceptScheme'): ['enum_definition'], rdflib.term.URIRef('https://w3id.org/linkml/EnumBinding'): ['enum_binding', 'enum_binding'], rdflib.term.URIRef('https://w3id.org/linkml/MatchQuery'): ['match_query', 'match_query'], rdflib.term.URIRef('https://w3id.org/linkml/ReachabilityQuery'): ['reachability_query', 'reachability_query'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#Label'): ['structured_alias'], rdflib.term.URIRef('https://w3id.org/linkml/StructuredAlias'): ['structured_alias'], rdflib.term.URIRef('https://w3id.org/linkml/Expression'): ['expression', 'expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousExpression'): ['anonymous_expression', 'anonymous_expression'], rdflib.term.URIRef('https://w3id.org/linkml/PathExpression'): ['path_expression', 'path_expression'], rdflib.term.URIRef('https://w3id.org/linkml/SlotExpression'): ['slot_expression', 'slot_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousSlotExpression'): ['anonymous_slot_expression', 'anonymous_slot_expression'], rdflib.term.URIRef('https://w3id.org/linkml/SlotDefinition'): ['slot_definition', 'slot_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#ComponentProperty'): ['slot_definition'], rdflib.term.URIRef('https://w3id.org/linkml/ClassExpression'): ['class_expression', 'class_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousClassExpression'): ['anonymous_class_expression', 'anonymous_class_expression'], rdflib.term.URIRef('https://w3id.org/linkml/ClassDefinition'): ['class_definition', 'class_definition'], rdflib.term.URIRef('https://w3id.org/linkml/ClassLevelRule'): ['class_level_rule', 'class_level_rule'], rdflib.term.URIRef('https://w3id.org/linkml/ClassRule'): ['class_rule', 'class_rule'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#TripleRule'): ['class_rule'], rdflib.term.URIRef('http://www.w3.org/2003/11/swrl#Imp'): ['class_rule'], rdflib.term.URIRef('https://w3id.org/linkml/ArrayExpression'): ['array_expression', 'array_expression'], rdflib.term.URIRef('https://w3id.org/linkml/DimensionExpression'): ['dimension_expression', 'dimension_expression'], rdflib.term.URIRef('https://w3id.org/linkml/PatternExpression'): ['pattern_expression', 'pattern_expression'], rdflib.term.URIRef('https://w3id.org/linkml/ImportExpression'): ['import_expression', 'import_expression'], rdflib.term.URIRef('https://w3id.org/linkml/Setting'): ['setting', 'setting'], rdflib.term.URIRef('https://w3id.org/linkml/Prefix'): ['prefix', 'prefix'], rdflib.term.URIRef('https://w3id.org/linkml/LocalName'): ['local_name', 'local_name'], rdflib.term.URIRef('https://w3id.org/linkml/Example'): ['example', 'example'], rdflib.term.URIRef('https://w3id.org/linkml/AltDescription'): ['alt_description', 'alt_description'], rdflib.term.URIRef('https://w3id.org/linkml/PermissibleValue'): ['permissible_value', 'permissible_value'], rdflib.term.URIRef('https://w3id.org/linkml/UniqueKey'): ['unique_key', 'unique_key'], rdflib.term.URIRef('https://w3id.org/linkml/TypeMapping'): ['type_mapping', 'type_mapping'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#mappingRelation'): ['mappings'], rdflib.term.URIRef('https://w3id.org/linkml/mappings'): ['mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#exactMatch'): ['exact mappings'], rdflib.term.URIRef('https://w3id.org/linkml/exact_mappings'): ['exact mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#closeMatch'): ['close mappings'], rdflib.term.URIRef('https://w3id.org/linkml/close_mappings'): ['close mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#relatedMatch'): ['related mappings'], rdflib.term.URIRef('https://w3id.org/linkml/related_mappings'): ['related mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#narrowMatch'): ['narrow mappings'], rdflib.term.URIRef('https://w3id.org/linkml/narrow_mappings'): ['narrow mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#broadMatch'): ['broad mappings'], rdflib.term.URIRef('https://w3id.org/linkml/broad_mappings'): ['broad mappings'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated_element_has_exact_replacement'): ['deprecated element has exact replacement', 'deprecated element has exact replacement'], rdflib.term.URIRef('http://purl.obolibrary.org/obo/IAO_0100001'): ['deprecated element has exact replacement'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated_element_has_possible_replacement'): ['deprecated element has possible replacement', 'deprecated element has possible replacement'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#consider'): ['deprecated element has possible replacement'], rdflib.term.URIRef('https://w3id.org/linkml/extensions'): ['extensions', 'extensions'], rdflib.term.URIRef('https://w3id.org/linkml/extension_tag'): ['extension_tag', 'extension_tag'], rdflib.term.URIRef('https://w3id.org/linkml/extension_value'): ['extension_value', 'extension_value'], rdflib.term.URIRef('https://w3id.org/linkml/annotations'): ['annotations', 'annotations'], rdflib.term.URIRef('http://qudt.org/schema/qudt/unit'): ['unit'], rdflib.term.URIRef('https://w3id.org/linkml/unit'): ['unit'], rdflib.term.URIRef('http://qudt.org/schema/qudt/ucumCode'): ['ucum_code'], rdflib.term.URIRef('https://w3id.org/linkml/ucum_code'): ['ucum_code'], rdflib.term.URIRef('https://w3id.org/linkml/derivation'): ['derivation', 'derivation'], rdflib.term.URIRef('http://qudt.org/schema/qudt/hasQuantityKind'): ['has_quantity_kind'], rdflib.term.URIRef('https://w3id.org/linkml/has_quantity_kind'): ['has_quantity_kind'], rdflib.term.URIRef('http://qudt.org/schema/qudt/iec61360Code'): ['iec61360code'], rdflib.term.URIRef('https://w3id.org/linkml/iec61360code'): ['iec61360code'], rdflib.term.URIRef('http://qudt.org/schema/qudt/symbol'): ['symbol'], rdflib.term.URIRef('https://w3id.org/linkml/symbol'): ['symbol'], rdflib.term.URIRef('http://qudt.org/schema/qudt/abbreviation'): ['abbreviation'], rdflib.term.URIRef('https://w3id.org/linkml/abbreviation'): ['abbreviation'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#label'): ['descriptive_name', 'name'], rdflib.term.URIRef('https://w3id.org/linkml/descriptive_name'): ['descriptive_name'], rdflib.term.URIRef('https://w3id.org/linkml/name'): ['name'], rdflib.term.URIRef('http://schema.org/name'): ['name'], rdflib.term.URIRef('http://purl.org/dc/terms/title'): ['title'], rdflib.term.URIRef('https://w3id.org/linkml/title'): ['title'], rdflib.term.URIRef('http://purl.org/dc/terms/conformsTo'): ['conforms_to'], rdflib.term.URIRef('https://w3id.org/linkml/conforms_to'): ['conforms_to'], rdflib.term.URIRef('https://w3id.org/linkml/implements'): ['implements', 'implements'], rdflib.term.URIRef('https://w3id.org/linkml/instantiates'): ['instantiates', 'instantiates'], rdflib.term.URIRef('http://purl.org/dc/terms/subject'): ['categories'], rdflib.term.URIRef('https://w3id.org/linkml/categories'): ['categories'], rdflib.term.URIRef('http://schema.org/keywords'): ['keywords'], rdflib.term.URIRef('https://w3id.org/linkml/keywords'): ['keywords'], rdflib.term.URIRef('https://w3id.org/linkml/definition_uri'): ['definition_uri', 'definition_uri'], rdflib.term.URIRef('https://w3id.org/linkml/id_prefixes'): ['id_prefixes', 'id_prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/id_prefixes_are_closed'): ['id_prefixes_are_closed', 'id_prefixes_are_closed'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#definition'): ['description'], rdflib.term.URIRef('https://w3id.org/linkml/description'): ['description'], rdflib.term.URIRef('http://purl.org/dc/terms/description'): ['description'], rdflib.term.URIRef('http://schema.org/description'): ['description'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#altLabel'): ['structured_aliases'], rdflib.term.URIRef('https://w3id.org/linkml/structured_aliases'): ['structured_aliases'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#altLabel'): ['aliases', 'singular_name', 'local_name_value'], rdflib.term.URIRef('https://w3id.org/linkml/aliases'): ['aliases'], rdflib.term.URIRef('http://schema.org/alternateName'): ['aliases'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated'): ['deprecated', 'deprecated'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#deprecated'): ['deprecated'], rdflib.term.URIRef('https://w3id.org/linkml/todos'): ['todos', 'todos'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#editorialNote'): ['notes'], rdflib.term.URIRef('https://w3id.org/linkml/notes'): ['notes'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#note'): ['comments'], rdflib.term.URIRef('https://w3id.org/linkml/comments'): ['comments'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#inSubset'): ['in_subset'], rdflib.term.URIRef('https://w3id.org/linkml/in_subset'): ['in_subset'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#inScheme'): ['from_schema'], rdflib.term.URIRef('https://w3id.org/linkml/from_schema'): ['from_schema'], rdflib.term.URIRef('https://w3id.org/linkml/imported_from'): ['imported_from', 'imported_from'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#seeAlso'): ['see_also'], rdflib.term.URIRef('https://w3id.org/linkml/see_also'): ['see_also'], rdflib.term.URIRef('https://w3id.org/linkml/owned_by'): ['owned_by', 'owned_by'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#isDefinedBy'): ['owned_by'], rdflib.term.URIRef('http://purl.org/pav/createdBy'): ['created_by'], rdflib.term.URIRef('https://w3id.org/linkml/created_by'): ['created_by'], rdflib.term.URIRef('http://purl.org/dc/terms/contributor'): ['contributors'], rdflib.term.URIRef('https://w3id.org/linkml/contributors'): ['contributors'], rdflib.term.URIRef('http://purl.org/pav/createdOn'): ['created_on'], rdflib.term.URIRef('https://w3id.org/linkml/created_on'): ['created_on'], rdflib.term.URIRef('http://purl.org/pav/lastUpdatedOn'): ['last_updated_on'], rdflib.term.URIRef('https://w3id.org/linkml/last_updated_on'): ['last_updated_on'], rdflib.term.URIRef('http://open-services.net/ns/core#modifiedBy'): ['modified_by'], rdflib.term.URIRef('https://w3id.org/linkml/modified_by'): ['modified_by'], rdflib.term.URIRef('http://purl.org/ontology/bibo/status'): ['status'], rdflib.term.URIRef('https://w3id.org/linkml/status'): ['status'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#literalForm'): ['literal_form'], rdflib.term.URIRef('https://w3id.org/linkml/literal_form'): ['literal_form'], rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate'): ['alias_predicate'], rdflib.term.URIRef('https://w3id.org/linkml/alias_predicate'): ['alias_predicate'], rdflib.term.URIRef('https://w3id.org/linkml/alias_contexts'): ['alias_contexts', 'alias_contexts'], rdflib.term.URIRef('http://schema.org/inLanguage'): ['in_language'], rdflib.term.URIRef('https://w3id.org/linkml/in_language'): ['in_language'], rdflib.term.URIRef('http://purl.org/dc/terms/source'): ['source'], rdflib.term.URIRef('https://w3id.org/linkml/source'): ['source'], rdflib.term.URIRef('http://www.w3.org/ns/prov#wasDerivedFrom'): ['source'], rdflib.term.URIRef('http://schema.org/isBasedOn'): ['source'], rdflib.term.URIRef('http://purl.org/dc/terms/publisher'): ['publisher'], rdflib.term.URIRef('https://w3id.org/linkml/publisher'): ['publisher'], rdflib.term.URIRef('https://w3id.org/linkml/is_a'): ['is_a', 'is_a'], rdflib.term.URIRef('https://w3id.org/linkml/abstract'): ['abstract', 'abstract'], rdflib.term.URIRef('https://w3id.org/linkml/mixin'): ['mixin', 'mixin'], rdflib.term.URIRef('https://w3id.org/linkml/mixins'): ['mixins', 'mixins'], rdflib.term.URIRef('https://w3id.org/linkml/apply_to'): ['apply_to', 'apply_to'], rdflib.term.URIRef('https://w3id.org/linkml/values_from'): ['values_from', 'values_from'], rdflib.term.URIRef('https://w3id.org/linkml/code_set'): ['code_set', 'code_set'], rdflib.term.URIRef('https://w3id.org/linkml/code_set_version'): ['code_set_version', 'code_set_version'], rdflib.term.URIRef('https://w3id.org/linkml/code_set_tag'): ['code_set_tag', 'code_set_tag'], rdflib.term.URIRef('https://w3id.org/linkml/pv_formula'): ['pv_formula', 'pv_formula'], rdflib.term.URIRef('https://w3id.org/linkml/permissible_values'): ['permissible_values', 'permissible_values'], rdflib.term.URIRef('http://rdf.cdisc.org/mms#PermissibleValue'): ['permissible_values'], rdflib.term.URIRef('https://w3id.org/linkml/enum_uri'): ['enum_uri', 'enum_uri'], rdflib.term.URIRef('https://w3id.org/linkml/include'): ['include', 'include'], rdflib.term.URIRef('https://w3id.org/linkml/minus'): ['minus', 'minus'], rdflib.term.URIRef('https://w3id.org/linkml/inherits'): ['inherits', 'inherits'], rdflib.term.URIRef('https://w3id.org/linkml/matches'): ['matches', 'matches'], rdflib.term.URIRef('https://w3id.org/linkml/identifier_pattern'): ['identifier_pattern', 'identifier_pattern'], rdflib.term.URIRef('https://w3id.org/linkml/concepts'): ['concepts', 'concepts'], rdflib.term.URIRef('https://w3id.org/linkml/reachable_from'): ['reachable_from', 'reachable_from'], rdflib.term.URIRef('https://w3id.org/linkml/source_ontology'): ['source_ontology', 'source_ontology'], rdflib.term.URIRef('https://w3id.org/linkml/is_direct'): ['is_direct', 'is_direct'], rdflib.term.URIRef('https://w3id.org/linkml/traverse_up'): ['traverse_up', 'traverse_up'], rdflib.term.URIRef('https://w3id.org/linkml/include_self'): ['include_self', 'include_self'], rdflib.term.URIRef('https://w3id.org/linkml/relationship_types'): ['relationship_types', 'relationship_types'], rdflib.term.URIRef('https://w3id.org/linkml/source_nodes'): ['source_nodes', 'source_nodes'], rdflib.term.URIRef('https://w3id.org/linkml/text'): ['text', 'text'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#notation'): ['text'], rdflib.term.URIRef('https://w3id.org/linkml/meaning'): ['meaning', 'meaning'], rdflib.term.URIRef('https://w3id.org/linkml/id'): ['id', 'id'], rdflib.term.URIRef('https://w3id.org/linkml/emit_prefixes'): ['emit_prefixes', 'emit_prefixes'], rdflib.term.URIRef('http://purl.org/pav/version'): ['version'], rdflib.term.URIRef('https://w3id.org/linkml/version'): ['version'], rdflib.term.URIRef('http://schema.org/schemaVersion'): ['version'], rdflib.term.URIRef('https://w3id.org/linkml/imports'): ['imports', 'imports'], rdflib.term.URIRef('https://w3id.org/linkml/structured_imports'): ['structured_imports', 'structured_imports'], rdflib.term.URIRef('http://purl.org/dc/terms/license'): ['license'], rdflib.term.URIRef('https://w3id.org/linkml/license'): ['license'], rdflib.term.URIRef('https://w3id.org/linkml/default_curi_maps'): ['default_curi_maps', 'default_curi_maps'], rdflib.term.URIRef('https://w3id.org/linkml/default_prefix'): ['default_prefix', 'default_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/default_range'): ['default_range', 'default_range'], rdflib.term.URIRef('https://w3id.org/linkml/subsets'): ['subsets', 'subsets'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#hasSubset'): ['subsets'], rdflib.term.URIRef('https://w3id.org/linkml/types'): ['types', 'types'], rdflib.term.URIRef('https://w3id.org/linkml/enums'): ['enums', 'enums'], rdflib.term.URIRef('https://w3id.org/linkml/slot_definitions'): ['slot_definitions', 'slot_definitions'], rdflib.term.URIRef('https://w3id.org/linkml/classes'): ['classes', 'classes'], rdflib.term.URIRef('https://w3id.org/linkml/metamodel_version'): ['metamodel_version', 'metamodel_version'], rdflib.term.URIRef('https://w3id.org/linkml/source_file'): ['source_file', 'source_file'], rdflib.term.URIRef('https://w3id.org/linkml/source_file_date'): ['source_file_date', 'source_file_date'], rdflib.term.URIRef('https://w3id.org/linkml/source_file_size'): ['source_file_size', 'source_file_size'], rdflib.term.URIRef('https://w3id.org/linkml/generation_date'): ['generation_date', 'generation_date'], rdflib.term.URIRef('https://w3id.org/linkml/slots'): ['slots', 'slots'], rdflib.term.URIRef('https://w3id.org/linkml/slot_usage'): ['slot_usage', 'slot_usage'], rdflib.term.URIRef('https://w3id.org/linkml/enum_range'): ['enum_range', 'enum_range'], rdflib.term.URIRef('https://w3id.org/linkml/range_expression'): ['range_expression', 'range_expression'], rdflib.term.URIRef('https://w3id.org/linkml/boolean_slot'): ['boolean_slot', 'boolean_slot'], rdflib.term.URIRef('https://w3id.org/linkml/any_of'): ['any_of', 'any_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#or'): ['any_of'], rdflib.term.URIRef('https://w3id.org/linkml/exactly_one_of'): ['exactly_one_of', 'exactly_one_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#xone'): ['exactly_one_of'], rdflib.term.URIRef('https://w3id.org/linkml/none_of'): ['none_of', 'none_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#not'): ['none_of'], rdflib.term.URIRef('https://w3id.org/linkml/all_of'): ['all_of', 'all_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#and'): ['all_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#condition'): ['preconditions'], rdflib.term.URIRef('https://w3id.org/linkml/preconditions'): ['preconditions'], rdflib.term.URIRef('http://www.w3.org/2003/11/swrl#body'): ['preconditions', 'postconditions'], rdflib.term.URIRef('https://w3id.org/linkml/postconditions'): ['postconditions', 'postconditions'], rdflib.term.URIRef('https://w3id.org/linkml/elseconditions'): ['elseconditions', 'elseconditions'], rdflib.term.URIRef('https://w3id.org/linkml/bidirectional'): ['bidirectional', 'bidirectional'], rdflib.term.URIRef('https://w3id.org/linkml/open_world'): ['open_world', 'open_world'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#order'): ['rank'], rdflib.term.URIRef('https://w3id.org/linkml/rank'): ['rank'], rdflib.term.URIRef('http://qudt.org/schema/qudt/order'): ['rank'], rdflib.term.URIRef('http://purl.org/linked-data/cube#order'): ['rank'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#deactivated'): ['deactivated'], rdflib.term.URIRef('https://w3id.org/linkml/deactivated'): ['deactivated'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#rule'): ['rules'], rdflib.term.URIRef('https://w3id.org/linkml/rules'): ['rules'], rdflib.term.URIRef('https://w3id.org/linkml/classification_rules'): ['classification_rules', 'classification_rules'], rdflib.term.URIRef('https://w3id.org/linkml/slot_conditions'): ['slot_conditions', 'slot_conditions'], rdflib.term.URIRef('https://w3id.org/linkml/attributes'): ['attributes', 'attributes'], rdflib.term.URIRef('https://w3id.org/linkml/class_uri'): ['class_uri', 'class_uri'], rdflib.term.URIRef('https://w3id.org/linkml/subclass_of'): ['subclass_of', 'subclass_of'], rdflib.term.URIRef('https://w3id.org/linkml/defining_slots'): ['defining_slots', 'defining_slots'], rdflib.term.URIRef('https://w3id.org/linkml/union_of'): ['union_of', 'union_of'], rdflib.term.URIRef('https://w3id.org/linkml/tree_root'): ['tree_root', 'tree_root'], rdflib.term.URIRef('https://w3id.org/linkml/unique_keys'): ['unique_keys', 'unique_keys'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#hasKey'): ['unique_keys'], rdflib.term.URIRef('https://w3id.org/linkml/unique_key_name'): ['unique_key_name', 'unique_key_name'], rdflib.term.URIRef('https://w3id.org/linkml/consider_nulls_inequal'): ['consider_nulls_inequal', 'consider_nulls_inequal'], rdflib.term.URIRef('https://w3id.org/linkml/unique_key_slots'): ['unique_key_slots', 'unique_key_slots'], rdflib.term.URIRef('https://w3id.org/linkml/slot_names_unique'): ['slot_names_unique', 'slot_names_unique'], rdflib.term.URIRef('https://w3id.org/linkml/domain'): ['domain', 'domain'], rdflib.term.URIRef('https://w3id.org/linkml/range'): ['range', 'range'], rdflib.term.URIRef('https://w3id.org/linkml/slot_uri'): ['slot_uri', 'slot_uri'], rdflib.term.URIRef('https://w3id.org/linkml/multivalued'): ['multivalued', 'multivalued'], rdflib.term.URIRef('https://w3id.org/linkml/array'): ['array', 'array'], rdflib.term.URIRef('https://w3id.org/linkml/dimensions'): ['dimensions', 'dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_number_dimensions'): ['minimum_number_dimensions', 'minimum_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_number_dimensions'): ['maximum_number_dimensions', 'maximum_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/exact_number_dimensions'): ['exact_number_dimensions', 'exact_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/inherited'): ['inherited', 'inherited'], rdflib.term.URIRef('https://w3id.org/linkml/readonly'): ['readonly', 'readonly'], rdflib.term.URIRef('https://w3id.org/linkml/ifabsent'): ['ifabsent', 'ifabsent'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#defaultValue'): ['ifabsent'], rdflib.term.URIRef('https://w3id.org/linkml/implicit_prefix'): ['implicit_prefix', 'implicit_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/value_specification_constant'): ['value_specification_constant', 'value_specification_constant'], rdflib.term.URIRef('https://w3id.org/linkml/list_value_specification_constant'): ['list_value_specification_constant', 'list_value_specification_constant'], rdflib.term.URIRef('https://w3id.org/linkml/value_presence'): ['value_presence', 'value_presence'], rdflib.term.URIRef('https://w3id.org/linkml/equals_string'): ['equals_string', 'equals_string'], rdflib.term.URIRef('https://w3id.org/linkml/equals_number'): ['equals_number', 'equals_number'], rdflib.term.URIRef('https://w3id.org/linkml/equals_expression'): ['equals_expression', 'equals_expression'], rdflib.term.URIRef('https://w3id.org/linkml/exact_cardinality'): ['exact_cardinality', 'exact_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_cardinality'): ['minimum_cardinality', 'minimum_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_cardinality'): ['maximum_cardinality', 'maximum_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/equals_string_in'): ['equals_string_in', 'equals_string_in'], rdflib.term.URIRef('https://w3id.org/linkml/equals_number_in'): ['equals_number_in', 'equals_number_in'], rdflib.term.URIRef('https://w3id.org/linkml/has_member'): ['has_member', 'has_member'], rdflib.term.URIRef('https://w3id.org/linkml/all_members'): ['all_members', 'all_members'], rdflib.term.URIRef('https://w3id.org/linkml/singular_name'): ['singular_name', 'singular_name'], rdflib.term.URIRef('https://w3id.org/linkml/required'): ['required', 'required'], rdflib.term.URIRef('https://w3id.org/linkml/recommended'): ['recommended', 'recommended'], rdflib.term.URIRef('https://w3id.org/linkml/inapplicable'): ['inapplicable', 'inapplicable'], rdflib.term.URIRef('https://w3id.org/linkml/inlined'): ['inlined', 'inlined'], rdflib.term.URIRef('https://w3id.org/linkml/inlined_as_list'): ['inlined_as_list', 'inlined_as_list'], rdflib.term.URIRef('https://w3id.org/linkml/inlined_as_simple_dict'): ['inlined_as_simple_dict', 'inlined_as_simple_dict'], rdflib.term.URIRef('https://w3id.org/linkml/list_elements_ordered'): ['list_elements_ordered', 'list_elements_ordered'], rdflib.term.URIRef('https://w3id.org/linkml/list_elements_unique'): ['list_elements_unique', 'list_elements_unique'], rdflib.term.URIRef('https://w3id.org/linkml/shared'): ['shared', 'shared'], rdflib.term.URIRef('https://w3id.org/linkml/key'): ['key', 'key'], rdflib.term.URIRef('https://w3id.org/linkml/identifier'): ['identifier', 'identifier'], rdflib.term.URIRef('https://w3id.org/linkml/designates_type'): ['designates_type', 'designates_type'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#prefLabel'): ['alias'], rdflib.term.URIRef('https://w3id.org/linkml/alias'): ['alias'], rdflib.term.URIRef('https://w3id.org/linkml/owner'): ['owner', 'owner'], rdflib.term.URIRef('https://w3id.org/linkml/domain_of'): ['domain_of', 'domain_of'], rdflib.term.URIRef('http://semanticscience.org/resource/SIO_000011'): ['domain_of'], rdflib.term.URIRef('https://w3id.org/linkml/is_usage_slot'): ['is_usage_slot', 'is_usage_slot'], rdflib.term.URIRef('https://w3id.org/linkml/usage_slot_name'): ['usage_slot_name', 'usage_slot_name'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#subPropertyOf'): ['subproperty_of'], rdflib.term.URIRef('https://w3id.org/linkml/subproperty_of'): ['subproperty_of'], rdflib.term.URIRef('https://w3id.org/linkml/disjoint_with'): ['disjoint_with', 'disjoint_with'], rdflib.term.URIRef('https://w3id.org/linkml/children_are_mutually_disjoint'): ['children_are_mutually_disjoint', 'children_are_mutually_disjoint'], rdflib.term.URIRef('https://w3id.org/linkml/relational_logical_characteristic'): ['relational_logical_characteristic', 'relational_logical_characteristic'], rdflib.term.URIRef('https://w3id.org/linkml/symmetric'): ['symmetric', 'symmetric'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#SymmetricProperty'): ['symmetric'], rdflib.term.URIRef('https://w3id.org/linkml/asymmetric'): ['asymmetric', 'asymmetric'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AsymmetricProperty'): ['asymmetric'], rdflib.term.URIRef('https://w3id.org/linkml/reflexive'): ['reflexive', 'reflexive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ReflexiveProperty'): ['reflexive'], rdflib.term.URIRef('https://w3id.org/linkml/irreflexive'): ['irreflexive', 'irreflexive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#IrreflexiveProperty'): ['irreflexive'], rdflib.term.URIRef('https://w3id.org/linkml/locally_reflexive'): ['locally_reflexive', 'locally_reflexive'], rdflib.term.URIRef('https://w3id.org/linkml/transitive'): ['transitive', 'transitive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#TransitiveProperty'): ['transitive'], rdflib.term.URIRef('https://w3id.org/linkml/transitive_form_of'): ['transitive_form_of', 'transitive_form_of'], rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of'): ['reflexive_transitive_form_of', 'reflexive_transitive_form_of'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#inverseOf'): ['inverse'], rdflib.term.URIRef('https://w3id.org/linkml/inverse'): ['inverse'], rdflib.term.URIRef('https://w3id.org/linkml/is_class_field'): ['is_class_field', 'is_class_field'], rdflib.term.URIRef('https://w3id.org/linkml/role'): ['role', 'role'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_value'): ['minimum_value', 'minimum_value'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_value'): ['maximum_value', 'maximum_value'], rdflib.term.URIRef('https://w3id.org/linkml/interpolated'): ['interpolated', 'interpolated'], rdflib.term.URIRef('https://w3id.org/linkml/partial_match'): ['partial_match', 'partial_match'], rdflib.term.URIRef('https://w3id.org/linkml/pattern'): ['pattern', 'pattern'], rdflib.term.URIRef('https://w3id.org/linkml/syntax'): ['syntax', 'syntax'], rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern'): ['structured_pattern', 'structured_pattern'], rdflib.term.URIRef('https://w3id.org/linkml/string_serialization'): ['string_serialization', 'string_serialization'], rdflib.term.URIRef('https://w3id.org/linkml/bindings'): ['bindings', 'bindings'], rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of'): ['binds_value_of', 'binds_value_of'], rdflib.term.URIRef('https://w3id.org/linkml/obligation_level'): ['obligation_level', 'obligation_level'], rdflib.term.URIRef('https://w3id.org/linkml/type_mappings'): ['type_mappings', 'type_mappings'], rdflib.term.URIRef('https://w3id.org/linkml/framework_key'): ['framework_key', 'framework_key'], rdflib.term.URIRef('https://w3id.org/linkml/mapped_type'): ['mapped_type', 'mapped_type'], rdflib.term.URIRef('https://w3id.org/linkml/typeof'): ['typeof', 'typeof'], rdflib.term.URIRef('https://w3id.org/linkml/base'): ['base', 'base'], rdflib.term.URIRef('https://w3id.org/linkml/type_uri'): ['type_uri', 'type_uri'], rdflib.term.URIRef('https://w3id.org/linkml/repr'): ['repr', 'repr'], rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text'): ['alt_description_text', 'alt_description_text'], rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source'): ['alt_description_source', 'alt_description_source'], rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions'): ['alt_descriptions', 'alt_descriptions'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#example'): ['value'], rdflib.term.URIRef('https://w3id.org/linkml/value'): ['value'], rdflib.term.URIRef('https://w3id.org/linkml/value_description'): ['value_description', 'value_description'], rdflib.term.URIRef('https://w3id.org/linkml/value_object'): ['value_object', 'value_object'], rdflib.term.URIRef('https://w3id.org/linkml/examples'): ['examples', 'examples'], rdflib.term.URIRef('https://vocab.org/vann/example'): ['examples'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#prefix'): ['prefix_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/prefix_prefix'): ['prefix_prefix'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#namespace'): ['prefix_reference'], rdflib.term.URIRef('https://w3id.org/linkml/prefix_reference'): ['prefix_reference'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#declare'): ['prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/prefixes'): ['prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/setting_key'): ['setting_key', 'setting_key'], rdflib.term.URIRef('https://w3id.org/linkml/setting_value'): ['setting_value', 'setting_value'], rdflib.term.URIRef('https://w3id.org/linkml/settings'): ['settings', 'settings'], rdflib.term.URIRef('https://w3id.org/linkml/import_from'): ['import_from', 'import_from'], rdflib.term.URIRef('https://w3id.org/linkml/import_as'): ['import_as', 'import_as'], rdflib.term.URIRef('https://w3id.org/linkml/import_map'): ['import_map', 'import_map'], rdflib.term.URIRef('https://w3id.org/linkml/local_name_source'): ['local_name_source', 'local_name_source'], rdflib.term.URIRef('https://w3id.org/linkml/local_name_value'): ['local_name_value'], rdflib.term.URIRef('https://w3id.org/linkml/local_names'): ['local_names', 'local_names'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#group'): ['slot_group'], rdflib.term.URIRef('https://w3id.org/linkml/slot_group'): ['slot_group'], rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'): ['is_grouping_slot', 'is_grouping_slot'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#PropertyGroup'): ['is_grouping_slot'], rdflib.term.URIRef('https://w3id.org/linkml/followed_by'): ['followed_by', 'followed_by'], rdflib.term.URIRef('https://w3id.org/linkml/reversed'): ['reversed', 'reversed'], rdflib.term.URIRef('https://w3id.org/linkml/traverse'): ['traverse', 'traverse'], rdflib.term.URIRef('https://w3id.org/linkml/path_rule'): ['path_rule', 'path_rule'], rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship'): ['represents_relationship', 'represents_relationship'], rdflib.term.URIRef('https://w3id.org/linkml/relational_role'): ['relational_role', 'relational_role'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'): ['string', 'curie', 'ncname', 'jsonpointer', 'jsonpath', 'sparqlpath'], rdflib.term.URIRef('https://w3id.org/linkml/string'): ['string'], rdflib.term.URIRef('http://schema.org/Text'): ['string'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#integer'): ['integer'], rdflib.term.URIRef('https://w3id.org/linkml/integer'): ['integer'], rdflib.term.URIRef('http://schema.org/Integer'): ['integer'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#boolean'): ['boolean'], rdflib.term.URIRef('https://w3id.org/linkml/boolean'): ['boolean'], rdflib.term.URIRef('http://schema.org/Boolean'): ['boolean'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#float'): ['float'], rdflib.term.URIRef('https://w3id.org/linkml/float'): ['float'], rdflib.term.URIRef('http://schema.org/Float'): ['float', 'double'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#double'): ['double'], rdflib.term.URIRef('https://w3id.org/linkml/double'): ['double'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#decimal'): ['decimal'], rdflib.term.URIRef('https://w3id.org/linkml/decimal'): ['decimal'], rdflib.term.URIRef('http://schema.org/Number'): ['decimal'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#time'): ['time'], rdflib.term.URIRef('https://w3id.org/linkml/time'): ['time'], rdflib.term.URIRef('http://schema.org/Time'): ['time'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#date'): ['date'], rdflib.term.URIRef('https://w3id.org/linkml/date'): ['date'], rdflib.term.URIRef('http://schema.org/Date'): ['date'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#dateTime'): ['datetime'], rdflib.term.URIRef('https://w3id.org/linkml/datetime'): ['datetime'], rdflib.term.URIRef('http://schema.org/DateTime'): ['datetime'], rdflib.term.URIRef('https://w3id.org/linkml/DateOrDatetime'): ['date_or_datetime'], rdflib.term.URIRef('https://w3id.org/linkml/date_or_datetime'): ['date_or_datetime'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'): ['uriorcurie', 'uri'], rdflib.term.URIRef('https://w3id.org/linkml/uriorcurie'): ['uriorcurie'], rdflib.term.URIRef('https://w3id.org/linkml/curie'): ['curie'], rdflib.term.URIRef('https://w3id.org/linkml/uri'): ['uri'], rdflib.term.URIRef('http://schema.org/URL'): ['uri'], rdflib.term.URIRef('https://w3id.org/linkml/ncname'): ['ncname'], rdflib.term.URIRef('http://www.w3.org/ns/shex#iri'): ['objectidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/objectidentifier'): ['objectidentifier'], rdflib.term.URIRef('http://www.w3.org/ns/shex#nonLiteral'): ['nodeidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/nodeidentifier'): ['nodeidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/jsonpointer'): ['jsonpointer'], rdflib.term.URIRef('https://w3id.org/linkml/jsonpath'): ['jsonpath'], rdflib.term.URIRef('https://w3id.org/linkml/sparqlpath'): ['sparqlpath']}), classdef_slots={'modified_by', 'none_of', 'name', 'rules', 'represents_relationship', 'source', 'slots', 'annotations', 'structured_aliases', 'slot_names_unique', 'tree_root', 'classification_rules', 'slot_conditions', 'id_prefixes_are_closed', 'created_on', 'in_language', 'is_a', 'related mappings', 'status', 'from_schema', 'in_subset', 'children_are_mutually_disjoint', 'todos', 'conforms_to', 'alt_descriptions', 'attributes', 'deprecated element has possible replacement', 'exactly_one_of', 'narrow mappings', 'local_names', 'string_serialization', 'imported_from', 'instantiates', 'apply_to', 'class_uri', 'description', 'values_from', 'deprecated', 'comments', 'subclass_of', 'any_of', 'mixins', 'disjoint_with', 'slot_usage', 'union_of', 'defining_slots', 'unique_keys', 'notes', 'created_by', 'keywords', 'last_updated_on', 'close mappings', 'abstract', 'categories', 'mappings', 'exact mappings', 'deprecated element has exact replacement', 'all_of', 'aliases', 'mixin', 'contributors', 'id_prefixes', 'definition_uri', 'examples', 'title', 'implements', 'extensions', 'broad mappings', 'see_also', 'rank'}, slotdef_slots={'range_expression', 'source', 'enum_range', 'reflexive', 'is_grouping_slot', 'from_schema', 'in_subset', 'multivalued', 'transitive_form_of', 'recommended', 'deprecated element has possible replacement', 'local_names', 'instantiates', 'unit', 'array', 'values_from', 'equals_string_in', 'mixins', 'notes', 'pattern', 'slot_group', 'usage_slot_name', 'all_members', 'definition_uri', 'implicit_prefix', 'identifier', 'has_member', 'created_on', 'readonly', 'in_language', 'is_a', 'bindings', 'asymmetric', 'maximum_cardinality', 'string_serialization', 'apply_to', 'path_rule', 'domain', 'ifabsent', 'any_of', 'reflexive_transitive_form_of', 'disjoint_with', 'relational_role', 'union_of', 'created_by', 'keywords', 'list_elements_unique', 'deprecated element has exact replacement', 'all_of', 'implements', 'extensions', 'mappings', 'role', 'rank', 'none_of', 'list_elements_ordered', 'inlined_as_list', 'owner', 'structured_aliases', 'inverse', 'structured_pattern', 'minimum_value', 'status', 'designates_type', 'type_mappings', 'equals_expression', 'is_usage_slot', 'children_are_mutually_disjoint', 'irreflexive', 'alt_descriptions', 'imported_from', 'domain_of', 'description', 'alias', 'locally_reflexive', 'range', 'singular_name', 'shared', 'close mappings', 'abstract', 'categories', 'inlined', 'mixin', 'examples', 'inherited', 'symmetric', 'broad mappings', 'slot_uri', 'see_also', 'equals_number', 'required', 'modified_by', 'name', 'annotations', 'id_prefixes_are_closed', 'related mappings', 'equals_string', 'transitive', 'maximum_value', 'todos', 'conforms_to', 'exactly_one_of', 'narrow mappings', 'value_presence', 'deprecated', 'comments', 'last_updated_on', 'exact mappings', 'aliases', 'is_class_field', 'contributors', 'id_prefixes', 'title', 'minimum_cardinality', 'key', 'subproperty_of', 'exact_cardinality'}, seen_prefixes=set(), prefix_counts=Counter())' - -.venv/lib/python3.9/site-packages/rdflib/parser.py:383: Exception -=============================== warnings summary =============================== -.venv/lib/python3.9/site-packages/pysolr.py:14 - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pysolr.py:14: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html - from pkg_resources import DistributionNotFound, get_distribution, parse_version - -.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144 -.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144 - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('sphinxcontrib')`. - Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages - declare_namespace(pkg) - -.venv/lib/python3.9/site-packages/quantulum3/classifier.py:28 - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/quantulum3/classifier.py:28: UserWarning: Classifier dependencies not installed. Run pip install quantulum3[classifier] to install them. The classifer helps to dissambiguate units. - warnings.warn( - -.venv/lib/python3.9/site-packages/pydantic/main.py:1132: 1771 warnings - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pydantic/main.py:1132: PydanticDeprecatedSince20: The `parse_obj` method is deprecated; use `model_validate` instead. Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.8/migration/ - warnings.warn( - -.venv/lib/python3.9/site-packages/pydantic/main.py:1087: 7084 warnings - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pydantic/main.py:1087: PydanticDeprecatedSince20: The `dict` method is deprecated; use `model_dump` instead. Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.8/migration/ - warnings.warn('The `dict` method is deprecated; use `model_dump` instead.', category=PydanticDeprecatedSince20) - -tests/test_annotators/test_schema_enricher.py::SchemaEnricherTestCase::test_enrich - /home/corey/Code/schema-automator/tests/test_annotators/test_schema_enricher.py:26: DeprecatedWarning: get_implementation_from_shorthand is deprecated as of Use get_adapter instead. - impl = get_implementation_from_shorthand(os.path.join(INPUT_DIR, "so-mini.obo")) - -tests/test_generalizers/test_from_robot_template.py::TestRobotTemplateImport::test_from_robot_template - /home/corey/Code/schema-automator/tests/test_generalizers/test_from_robot_template.py:30: DeprecationWarning: Call to deprecated method all_class. (Use `all_classes` instead) - for cn, c in sv.all_class().items(): - -tests/test_importers/test_dosdp_importer.py::TestDOSDPImporter::test_dosdp_import - /home/corey/Code/schema-automator/tests/test_importers/test_dosdp_importer.py:43: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) - sd = minify_schema(schema) - -tests/test_importers/test_dosdp_importer.py: 1667 warnings - /home/corey/Code/schema-automator/schema_automator/utils/schemautils.py:44: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) - minify_schema(v) - -tests/test_importers/test_dosdp_importer.py: 503 warnings - /home/corey/Code/schema-automator/schema_automator/utils/schemautils.py:47: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) - minify_schema(v) - --- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -=========================== short test summary info ============================ -FAILED tests/test_importers/test_rdfs_importer.py::test_infer_prefix - Except... -=========== 1 failed, 37 passed, 6 skipped, 11032 warnings in 26.42s =========== From 26ced867c823037404532ddcc3d8f99ab8ab8fc5 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Tue, 13 May 2025 16:16:23 -0500 Subject: [PATCH 65/88] Fix re import --- schema_automator/annotators/schema_annotator.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/schema_automator/annotators/schema_annotator.py b/schema_automator/annotators/schema_annotator.py index 514301a..a305419 100644 --- a/schema_automator/annotators/schema_annotator.py +++ b/schema_automator/annotators/schema_annotator.py @@ -1,12 +1,13 @@ import click import logging +import re import yaml from dataclasses import dataclass from typing import List, Union, Iterator from linkml_runtime.linkml_model import SchemaDefinition, Element, PermissibleValue, ClassDefinition, SlotDefinition from linkml_runtime.utils.metamodelcore import Curie -from linkml_runtime.utils.schemaview import SchemaView, re, EnumDefinition +from linkml_runtime.utils.schemaview import SchemaView, EnumDefinition from oaklib import BasicOntologyInterface from oaklib.datamodels.search import SearchConfiguration from oaklib.datamodels.text_annotator import TextAnnotation From 19114c1b40c19a89ca3829df4adcaaf385615e2e Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 11:08:19 -0500 Subject: [PATCH 66/88] Update linkml linkml-runtime schemasheets --- poetry.lock | 3379 +++++++++++++++++++++++------------------------- pyproject.toml | 7 +- 2 files changed, 1636 insertions(+), 1750 deletions(-) diff --git a/poetry.lock b/poetry.lock index 970059d..07a5628 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 2.0.1 and should not be changed by hand. +# This file is automatically @generated by Poetry 2.1.3 and should not be changed by hand. [[package]] name = "airium" @@ -7,7 +7,6 @@ description = "Easy and quick html builder with natural syntax correspondence (p optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "airium-0.2.6-py3-none-any.whl", hash = "sha256:50af5cf491e084f27909e29a93550b4170e587cde01334d58c6249644ee8c6c2"}, {file = "airium-0.2.6.tar.gz", hash = "sha256:ccab36b798b6cce3d0c5074e52ce8059f6e82991caae4985f42cadfad80b1de4"}, @@ -24,12 +23,25 @@ description = "A light, configurable Sphinx theme" optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" +markers = "python_version < \"3.11\"" files = [ {file = "alabaster-0.7.16-py3-none-any.whl", hash = "sha256:b46733c07dce03ae4e150330b975c75737fa60f0a7c591b6c8bf4928a28e2c92"}, {file = "alabaster-0.7.16.tar.gz", hash = "sha256:75a8b99c28a5dad50dd7f8ccdd447a121ddb3892da9e53d1ca5cca3106d58d65"}, ] +[[package]] +name = "alabaster" +version = "1.0.0" +description = "A light, configurable Sphinx theme" +optional = false +python-versions = ">=3.10" +groups = ["dev"] +markers = "python_version >= \"3.11\"" +files = [ + {file = "alabaster-1.0.0-py3-none-any.whl", hash = "sha256:fc6786402dc3fcb2de3cabd5fe455a2db534b371124f1f21de8731783dec828b"}, + {file = "alabaster-1.0.0.tar.gz", hash = "sha256:c00dca57bca26fa62a6d7d0a9fcce65f3e026e9bfe33e9c538fd3fbb2144fd9e"}, +] + [[package]] name = "annotated-types" version = "0.7.0" @@ -37,7 +49,6 @@ description = "Reusable constraint types to use with typing.Annotated" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "annotated_types-0.7.0-py3-none-any.whl", hash = "sha256:1f02e8b43a8fbbc3f3e0d4f0f4bfc8131bcb4eebe8849b8e5c773f3a1c582a53"}, {file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"}, @@ -50,23 +61,22 @@ description = "ANTLR 4.9.3 runtime for Python 3.7" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "antlr4-python3-runtime-4.9.3.tar.gz", hash = "sha256:f224469b4168294902bb1efa80a8bf7855f24c99aef99cbefc1bcd3cce77881b"}, ] [[package]] name = "anyio" -version = "4.8.0" +version = "4.9.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" optional = false python-versions = ">=3.9" groups = ["main", "dev"] files = [ - {file = "anyio-4.8.0-py3-none-any.whl", hash = "sha256:b5011f270ab5eb0abf13385f851315585cc37ef330dd88e27ec3d34d651fd47a"}, - {file = "anyio-4.8.0.tar.gz", hash = "sha256:1d9fe889df5212298c0c0723fa20479d1b94883a2df44bd3897aa91083316f7a"}, + {file = "anyio-4.9.0-py3-none-any.whl", hash = "sha256:9f76d541cad6e36af7beb62e978876f3b41e3e04f2c1fbf0884604c0a9c4d93c"}, + {file = "anyio-4.9.0.tar.gz", hash = "sha256:673c0c244e15788651a4ff38710fea9675823028a6f08a5eda409e0c9840a028"}, ] -markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} +markers = {main = "extra == \"llm\""} [package.dependencies] exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""} @@ -75,8 +85,8 @@ sniffio = ">=1.1" typing_extensions = {version = ">=4.5", markers = "python_version < \"3.13\""} [package.extras] -doc = ["Sphinx (>=7.4,<8.0)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx_rtd_theme"] -test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "trustme", "truststore (>=0.9.1)", "uvloop (>=0.21)"] +doc = ["Sphinx (>=8.2,<9.0)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx_rtd_theme"] +test = ["anyio[trio]", "blockbuster (>=1.5.23)", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "trustme", "truststore (>=0.9.1) ; python_version >= \"3.10\"", "uvloop (>=0.21) ; platform_python_implementation == \"CPython\" and platform_system != \"Windows\" and python_version < \"3.14\""] trio = ["trio (>=0.26.1)"] [[package]] @@ -86,7 +96,6 @@ description = "A small Python module for determining appropriate platform-specif optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"}, {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"}, @@ -99,7 +108,7 @@ description = "Disable App Nap on macOS >= 10.9" optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and platform_system == \"Darwin\"" +markers = "platform_system == \"Darwin\"" files = [ {file = "appnope-0.1.4-py2.py3-none-any.whl", hash = "sha256:502575ee11cd7a28c0205f379b525beefebab9d161b7c964670864014ed7213c"}, {file = "appnope-0.1.4.tar.gz", hash = "sha256:1de3860566df9caf38f01f86f65e0e13e379af54f9e4bee1e66b48f2efffd1ee"}, @@ -112,7 +121,6 @@ description = "Argon2 for Python" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "argon2_cffi-23.1.0-py3-none-any.whl", hash = "sha256:c670642b78ba29641818ab2e68bd4e6a78ba53b7eff7b4c3815ae16abf91c7ea"}, {file = "argon2_cffi-23.1.0.tar.gz", hash = "sha256:879c3e79a2729ce768ebb7d36d4609e3a78a4ca2ec3a9f12286ca057e3d0db08"}, @@ -134,7 +142,6 @@ description = "Low-level CFFI bindings for Argon2" optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "argon2-cffi-bindings-21.2.0.tar.gz", hash = "sha256:bb89ceffa6c791807d1305ceb77dbfacc5aa499891d2c55661c6459651fc39e3"}, {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-macosx_10_9_x86_64.whl", hash = "sha256:ccb949252cb2ab3a08c02024acb77cfb179492d5701c7cbdbfd776124d4d2367"}, @@ -173,7 +180,6 @@ description = "Better dates & times for Python" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "arrow-1.3.0-py3-none-any.whl", hash = "sha256:c728b120ebc00eb84e01882a6f5e7927a53960aa990ce7dd2b10f39005a67f80"}, {file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"}, @@ -194,7 +200,6 @@ description = "Annotate AST trees with source code positions" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "asttokens-3.0.0-py3-none-any.whl", hash = "sha256:e3078351a059199dd5138cb1c706e6430c05eff2ff136af5eb4790f9d28932e2"}, {file = "asttokens-3.0.0.tar.gz", hash = "sha256:0dcd8baa8d62b0c1d118b399b2ddba3c4aff271d0d7a9e0d4c1681c79035bbc7"}, @@ -206,40 +211,38 @@ test = ["astroid (>=2,<4)", "pytest", "pytest-cov", "pytest-xdist"] [[package]] name = "async-lru" -version = "2.0.4" +version = "2.0.5" description = "Simple LRU cache for asyncio" optional = false -python-versions = ">=3.8" +python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "async-lru-2.0.4.tar.gz", hash = "sha256:b8a59a5df60805ff63220b2a0c5b5393da5521b113cd5465a44eb037d81a5627"}, - {file = "async_lru-2.0.4-py3-none-any.whl", hash = "sha256:ff02944ce3c288c5be660c42dbcca0742b32c3b279d6dceda655190240b99224"}, + {file = "async_lru-2.0.5-py3-none-any.whl", hash = "sha256:ab95404d8d2605310d345932697371a5f40def0487c03d6d0ad9138de52c9943"}, + {file = "async_lru-2.0.5.tar.gz", hash = "sha256:481d52ccdd27275f42c43a928b4a50c3bfb2d67af4e78b170e3e0bb39c66e5bb"}, ] [package.dependencies] -typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""} +typing_extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""} [[package]] name = "attrs" -version = "25.1.0" +version = "25.3.0" description = "Classes Without Boilerplate" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "attrs-25.1.0-py3-none-any.whl", hash = "sha256:c75a69e28a550a7e93789579c22aa26b0f5b83b75dc4e08fe092980051e1090a"}, - 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false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonasobj-1.3.1-py3-none-any.whl", hash = "sha256:b9e329dc1ceaae7cf5d5b214684a0b100e0dad0be6d5bbabac281ec35ddeca65"}, {file = "jsonasobj-1.3.1.tar.gz", hash = "sha256:d52e0544a54a08f6ea3f77fa3387271e3648655e0eace2f21e825c26370e44a2"}, @@ -2084,7 +2097,6 @@ description = "JSON as python objects - version 2" optional = false python-versions = ">=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonasobj2-1.0.4-py3-none-any.whl", hash = "sha256:12e86f86324d54fcf60632db94ea74488d5314e3da554c994fe1e2c6f29acb79"}, {file = "jsonasobj2-1.0.4.tar.gz", hash = "sha256:f50b1668ef478004aa487b2d2d094c304e5cb6b79337809f4a1f2975cc7fbb4e"}, @@ -2100,7 +2112,6 @@ description = "Library with helpers for the jsonlines file format" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonlines-4.0.0-py3-none-any.whl", hash = "sha256:185b334ff2ca5a91362993f42e83588a360cf95ce4b71a73548502bda52a7c55"}, {file = "jsonlines-4.0.0.tar.gz", hash = "sha256:0c6d2c09117550c089995247f605ae4cf77dd1533041d366351f6f298822ea74"}, @@ -2109,39 +2120,6 @@ files = [ [package.dependencies] attrs = ">=19.2.0" -[[package]] -name = "jsonpatch" -version = "1.33" -description = "Apply JSON-Patches (RFC 6902)" -optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*" -groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" -files = [ - {file = "jsonpatch-1.33-py2.py3-none-any.whl", hash = "sha256:0ae28c0cd062bbd8b8ecc26d7d164fbbea9652a1a3693f3b956c1eae5145dade"}, - {file = "jsonpatch-1.33.tar.gz", hash = "sha256:9fcd4009c41e6d12348b4a0ff2563ba56a2923a7dfee731d004e212e1ee5030c"}, -] - -[package.dependencies] -jsonpointer = ">=1.9" - 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">=3.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonpointer-3.0.0-py2.py3-none-any.whl", hash = "sha256:13e088adc14fca8b6aa8177c044e12701e6ad4b28ff10e65f2267a90109c9942"}, {file = "jsonpointer-3.0.0.tar.gz", hash = "sha256:2b2d729f2091522d61c3b31f82e11870f60b68f43fbc705cb76bf4b832af59ef"}, @@ -2162,7 +2139,6 @@ description = "An implementation of JSON Schema validation for Python" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonschema-4.23.0-py3-none-any.whl", hash = "sha256:fbadb6f8b144a8f8cf9f0b89ba94501d143e50411a1278633f56a7acf7fd5566"}, {file = "jsonschema-4.23.0.tar.gz", hash = "sha256:d71497fef26351a33265337fa77ffeb82423f3ea21283cd9467bb03999266bc4"}, @@ -2210,15 +2186,14 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339- [[package]] name = "jsonschema-specifications" -version = "2024.10.1" +version = "2025.4.1" description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry" optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "jsonschema_specifications-2024.10.1-py3-none-any.whl", hash = "sha256:a09a0680616357d9a0ecf05c12ad234479f549239d0f5b55f3deea67475da9bf"}, - {file = "jsonschema_specifications-2024.10.1.tar.gz", hash = "sha256:0f38b83639958ce1152d02a7f062902c41c8fd20d558b0c34344292d417ae272"}, + {file = "jsonschema_specifications-2025.4.1-py3-none-any.whl", hash = "sha256:4653bffbd6584f7de83a67e0d620ef16900b390ddc7939d56684d6c81e33f1af"}, + {file = "jsonschema_specifications-2025.4.1.tar.gz", hash = "sha256:630159c9f4dbea161a6a2205c3011cc4f18ff381b189fff48bb39b9bf26ae608"}, ] [package.dependencies] @@ -2231,7 +2206,6 @@ description = "Jupyter metapackage. Install all the Jupyter components in one go optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter-1.1.1-py2.py3-none-any.whl", hash = "sha256:7a59533c22af65439b24bbe60373a4e95af8f16ac65a6c00820ad378e3f7cc83"}, {file = "jupyter-1.1.1.tar.gz", hash = "sha256:d55467bceabdea49d7e3624af7e33d59c37fff53ed3a350e1ac957bed731de7a"}, @@ -2252,7 +2226,6 @@ description = "Jupyter protocol implementation and client libraries" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_client-8.6.3-py3-none-any.whl", hash = "sha256:e8a19cc986cc45905ac3362915f410f3af85424b4c0905e94fa5f2cb08e8f23f"}, {file = "jupyter_client-8.6.3.tar.gz", hash = "sha256:35b3a0947c4a6e9d589eb97d7d4cd5e90f910ee73101611f01283732bd6d9419"}, @@ -2268,7 +2241,7 @@ traitlets = ">=5.3" [package.extras] docs = ["ipykernel", "myst-parser", "pydata-sphinx-theme", "sphinx (>=4)", "sphinx-autodoc-typehints", "sphinxcontrib-github-alt", "sphinxcontrib-spelling"] -test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pytest (<8.2.0)", "pytest-cov", "pytest-jupyter[client] (>=0.4.1)", "pytest-timeout"] +test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko ; sys_platform == \"win32\"", "pre-commit", "pytest (<8.2.0)", "pytest-cov", "pytest-jupyter[client] (>=0.4.1)", "pytest-timeout"] [[package]] name = "jupyter-console" @@ -2277,7 +2250,6 @@ description = "Jupyter terminal console" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_console-6.6.3-py3-none-any.whl", hash = "sha256:309d33409fcc92ffdad25f0bcdf9a4a9daa61b6f341177570fdac03de5352485"}, {file = "jupyter_console-6.6.3.tar.gz", hash = "sha256:566a4bf31c87adbfadf22cdf846e3069b59a71ed5da71d6ba4d8aaad14a53539"}, @@ -2303,7 +2275,6 @@ description = "Jupyter core package. A base package on which Jupyter projects re optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_core-5.7.2-py3-none-any.whl", hash = "sha256:4f7315d2f6b4bcf2e3e7cb6e46772eba760ae459cd1f59d29eb57b0a01bd7409"}, {file = "jupyter_core-5.7.2.tar.gz", hash = "sha256:aa5f8d32bbf6b431ac830496da7392035d6f61b4f54872f15c4bd2a9c3f536d9"}, @@ -2325,7 +2296,6 @@ description = "Jupyter Event System library" optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_events-0.12.0-py3-none-any.whl", hash = "sha256:6464b2fa5ad10451c3d35fabc75eab39556ae1e2853ad0c0cc31b656731a97fb"}, {file = "jupyter_events-0.12.0.tar.gz", hash = "sha256:fc3fce98865f6784c9cd0a56a20644fc6098f21c8c33834a8d9fe383c17e554b"}, @@ -2353,7 +2323,6 @@ description = "Multi-Language Server WebSocket proxy for Jupyter Notebook/Lab se optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter-lsp-2.2.5.tar.gz", hash = "sha256:793147a05ad446f809fd53ef1cd19a9f5256fd0a2d6b7ce943a982cb4f545001"}, {file = "jupyter_lsp-2.2.5-py3-none-any.whl", hash = "sha256:45fbddbd505f3fbfb0b6cb2f1bc5e15e83ab7c79cd6e89416b248cb3c00c11da"}, @@ -2365,15 +2334,14 @@ jupyter-server = ">=1.1.2" [[package]] name = "jupyter-server" -version = "2.15.0" +version = "2.16.0" description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications." optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "jupyter_server-2.15.0-py3-none-any.whl", hash = "sha256:872d989becf83517012ee669f09604aa4a28097c0bd90b2f424310156c2cdae3"}, - {file = "jupyter_server-2.15.0.tar.gz", hash = "sha256:9d446b8697b4f7337a1b7cdcac40778babdd93ba614b6d68ab1c0c918f1c4084"}, + {file = "jupyter_server-2.16.0-py3-none-any.whl", hash = "sha256:3d8db5be3bc64403b1c65b400a1d7f4647a5ce743f3b20dbdefe8ddb7b55af9e"}, + {file = "jupyter_server-2.16.0.tar.gz", hash = "sha256:65d4b44fdf2dcbbdfe0aa1ace4a842d4aaf746a2b7b168134d5aaed35621b7f6"}, ] [package.dependencies] @@ -2408,7 +2376,6 @@ description = "A Jupyter Server Extension Providing Terminals." optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_server_terminals-0.5.3-py3-none-any.whl", hash = "sha256:41ee0d7dc0ebf2809c668e0fc726dfaf258fcd3e769568996ca731b6194ae9aa"}, {file = "jupyter_server_terminals-0.5.3.tar.gz", hash = "sha256:5ae0295167220e9ace0edcfdb212afd2b01ee8d179fe6f23c899590e9b8a5269"}, @@ -2424,15 +2391,14 @@ test = ["jupyter-server (>=2.0.0)", "pytest (>=7.0)", "pytest-jupyter[server] (> [[package]] name = "jupyterlab" -version = "4.3.5" +version = "4.4.2" description = "JupyterLab computational environment" optional = false -python-versions = ">=3.8" +python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "jupyterlab-4.3.5-py3-none-any.whl", hash = "sha256:571bbdee20e4c5321ab5195bc41cf92a75a5cff886be5e57ce78dfa37a5e9fdb"}, - {file = "jupyterlab-4.3.5.tar.gz", hash = "sha256:c779bf72ced007d7d29d5bcef128e7fdda96ea69299e19b04a43635a7d641f9d"}, + {file = "jupyterlab-4.4.2-py3-none-any.whl", hash = "sha256:857111a50bed68542bf55dca784522fe728f9f88b4fe69e8c585db5c50900419"}, + {file = "jupyterlab-4.4.2.tar.gz", hash = "sha256:afa9caf28c0cb966488be18e5e8daba9f018a1c4273a406b7d5006344cbc6d16"}, ] [package.dependencies] @@ -2447,15 +2413,15 @@ jupyter-server = ">=2.4.0,<3" jupyterlab-server = ">=2.27.1,<3" notebook-shim = ">=0.2" packaging = "*" -setuptools = ">=40.8.0" +setuptools = ">=41.1.0" tomli = {version = ">=1.2.2", markers = "python_version < \"3.11\""} tornado = ">=6.2.0" traitlets = "*" [package.extras] -dev = ["build", "bump2version", "coverage", "hatch", "pre-commit", "pytest-cov", "ruff (==0.6.9)"] -docs = ["jsx-lexer", "myst-parser", "pydata-sphinx-theme (>=0.13.0)", "pytest", "pytest-check-links", "pytest-jupyter", "sphinx (>=1.8,<8.1.0)", "sphinx-copybutton"] -docs-screenshots = ["altair (==5.4.1)", "ipython (==8.16.1)", "ipywidgets (==8.1.5)", "jupyterlab-geojson (==3.4.0)", "jupyterlab-language-pack-zh-cn (==4.2.post3)", "matplotlib (==3.9.2)", "nbconvert (>=7.0.0)", "pandas (==2.2.3)", "scipy (==1.14.1)", "vega-datasets (==0.9.0)"] +dev = ["build", "bump2version", "coverage", "hatch", "pre-commit", "pytest-cov", "ruff (==0.11.4)"] +docs = ["jsx-lexer", "myst-parser", "pydata-sphinx-theme (>=0.13.0)", "pytest", "pytest-check-links", "pytest-jupyter", "sphinx (>=1.8,<8.2.0)", "sphinx-copybutton"] +docs-screenshots = ["altair (==5.5.0)", "ipython (==8.16.1)", "ipywidgets (==8.1.5)", "jupyterlab-geojson (==3.4.0)", "jupyterlab-language-pack-zh-cn (==4.3.post1)", "matplotlib (==3.10.0)", "nbconvert (>=7.0.0)", "pandas (==2.2.3)", "scipy (==1.15.1)", "vega-datasets (==0.9.0)"] test = ["coverage", "pytest (>=7.0)", "pytest-check-links (>=0.7)", "pytest-console-scripts", "pytest-cov", "pytest-jupyter (>=0.5.3)", "pytest-timeout", "pytest-tornasync", "requests", "requests-cache", "virtualenv"] upgrade-extension = ["copier (>=9,<10)", "jinja2-time (<0.3)", "pydantic (<3.0)", "pyyaml-include (<3.0)", "tomli-w (<2.0)"] @@ -2466,7 +2432,6 @@ description = "Pygments theme using JupyterLab CSS variables" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab_pygments-0.3.0-py3-none-any.whl", hash = "sha256:841a89020971da1d8693f1a99997aefc5dc424bb1b251fd6322462a1b8842780"}, {file = "jupyterlab_pygments-0.3.0.tar.gz", hash = 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Markdown parsing, done right!" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "markdown-it-py-3.0.0.tar.gz", hash = "sha256:e3f60a94fa066dc52ec76661e37c851cb232d92f9886b15cb560aaada2df8feb"}, {file = "markdown_it_py-3.0.0-py3-none-any.whl", hash = "sha256:355216845c60bd96232cd8d8c40e8f9765cc86f46880e43a8fd22dc1a1a8cab1"}, @@ -2926,7 +2855,6 @@ description = "Safely add untrusted strings to HTML/XML markup." optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "MarkupSafe-3.0.2-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:7e94c425039cde14257288fd61dcfb01963e658efbc0ff54f5306b06054700f8"}, {file = "MarkupSafe-3.0.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:9e2d922824181480953426608b81967de705c3cef4d1af983af849d7bd619158"}, @@ -2998,7 +2926,6 @@ description = "Inline Matplotlib backend for Jupyter" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "matplotlib_inline-0.1.7-py3-none-any.whl", hash = "sha256:df192d39a4ff8f21b1895d72e6a13f5fcc5099f00fa84384e0ea28c2cc0653ca"}, {file = "matplotlib_inline-0.1.7.tar.gz", hash = "sha256:8423b23ec666be3d16e16b60bdd8ac4e86e840ebd1dd11a30b9f117f2fa0ab90"}, @@ -3014,7 +2941,6 @@ description = "Collection of plugins for markdown-it-py" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mdit_py_plugins-0.4.2-py3-none-any.whl", hash = "sha256:0c673c3f889399a33b95e88d2f0d111b4447bdfea7f237dab2d488f459835636"}, {file = "mdit_py_plugins-0.4.2.tar.gz", hash = "sha256:5f2cd1fdb606ddf152d37ec30e46101a60512bc0e5fa1a7002c36647b09e26b5"}, @@ -3035,7 +2961,6 @@ description = "Markdown URL utilities" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mdurl-0.1.2-py3-none-any.whl", hash = "sha256:84008a41e51615a49fc9966191ff91509e3c40b939176e643fd50a5c2196b8f8"}, {file = "mdurl-0.1.2.tar.gz", hash = "sha256:bb413d29f5eea38f31dd4754dd7377d4465116fb207585f97bf925588687c1ba"}, @@ -3043,15 +2968,14 @@ files = [ [[package]] name = "mistune" -version = "3.1.1" +version = "3.1.3" description = "A sane and fast Markdown parser with useful plugins and renderers" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - 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Formerly nbconvert's Ex optional = false python-versions = ">=3.9.0" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbclient-0.10.2-py3-none-any.whl", hash = "sha256:4ffee11e788b4a27fabeb7955547e4318a5298f34342a4bfd01f2e1faaeadc3d"}, {file = "nbclient-0.10.2.tar.gz", hash = "sha256:90b7fc6b810630db87a6d0c2250b1f0ab4cf4d3c27a299b0cde78a4ed3fd9193"}, @@ -3161,7 +3109,6 @@ description = "Converting Jupyter Notebooks (.ipynb files) to other formats. Ou optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbconvert-7.16.6-py3-none-any.whl", hash = "sha256:1375a7b67e0c2883678c48e506dc320febb57685e5ee67faa51b18a90f3a712b"}, {file = "nbconvert-7.16.6.tar.gz", hash = "sha256:576a7e37c6480da7b8465eefa66c17844243816ce1ccc372633c6b71c3c0f582"}, @@ -3200,7 +3147,6 @@ description = "The Jupyter Notebook format" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbformat-5.10.4-py3-none-any.whl", hash = "sha256:3b48d6c8fbca4b299bf3982ea7db1af21580e4fec269ad087b9e81588891200b"}, {file = "nbformat-5.10.4.tar.gz", hash = "sha256:322168b14f937a5d11362988ecac2a4952d3d8e3a2cbeb2319584631226d5b3a"}, @@ -3223,7 +3169,6 @@ description = "Nice CX Python includes a client and a data model." optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ndex2-3.10.0-py2.py3-none-any.whl", hash = "sha256:fdb8307ccdbdf49044c9119373852242ca24a4926df1c5566e94965e59b70b67"}, {file = "ndex2-3.10.0.tar.gz", hash = "sha256:7e8cfc3fc940cddfd612810fc8c913ab61e01a43e4f482608e86c6548b81b7e1"}, @@ -3246,7 +3191,6 @@ description = "Patch asyncio to allow nested event loops" optional = false python-versions = ">=3.5" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nest_asyncio-1.6.0-py3-none-any.whl", hash = "sha256:87af6efd6b5e897c81050477ef65c62e2b2f35d51703cae01aff2905b1852e1c"}, {file = "nest_asyncio-1.6.0.tar.gz", hash = "sha256:6f172d5449aca15afd6c646851f4e31e02c598d553a667e38cafa997cfec55fe"}, @@ -3259,7 +3203,7 @@ description = "Python package for creating and manipulating graphs and networks" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" +markers = "python_version < \"3.11\"" files = [ {file = "networkx-3.2.1-py3-none-any.whl", hash = "sha256:f18c69adc97877c42332c170849c96cefa91881c99a7cb3e95b7c659ebdc1ec2"}, {file = "networkx-3.2.1.tar.gz", hash = "sha256:9f1bb5cf3409bf324e0a722c20bdb4c20ee39bf1c30ce8ae499c8502b0b5e0c6"}, @@ -3272,22 +3216,42 @@ doc = ["nb2plots (>=0.7)", "nbconvert (<7.9)", "numpydoc (>=1.6)", "pillow (>=9. extra = ["lxml (>=4.6)", "pydot (>=1.4.2)", "pygraphviz (>=1.11)", "sympy (>=1.10)"] test = ["pytest (>=7.2)", "pytest-cov (>=4.0)"] +[[package]] +name = "networkx" +version = "3.4.2" +description = "Python package for creating and manipulating graphs and networks" +optional = false +python-versions = ">=3.10" +groups = ["main"] +markers = "python_version >= \"3.11\"" +files = [ + {file = "networkx-3.4.2-py3-none-any.whl", hash = "sha256:df5d4365b724cf81b8c6a7312509d0c22386097011ad1abe274afd5e9d3bbc5f"}, + {file = "networkx-3.4.2.tar.gz", hash = "sha256:307c3669428c5362aab27c8a1260aa8f47c4e91d3891f48be0141738d8d053e1"}, +] + +[package.extras] +default = ["matplotlib (>=3.7)", "numpy (>=1.24)", "pandas (>=2.0)", "scipy (>=1.10,!=1.11.0,!=1.11.1)"] +developer = ["changelist (==0.5)", "mypy (>=1.1)", "pre-commit (>=3.2)", "rtoml"] +doc = ["intersphinx-registry", "myst-nb (>=1.1)", "numpydoc (>=1.8.0)", "pillow (>=9.4)", "pydata-sphinx-theme (>=0.15)", "sphinx (>=7.3)", "sphinx-gallery (>=0.16)", "texext (>=0.6.7)"] +example = ["cairocffi (>=1.7)", "contextily (>=1.6)", "igraph (>=0.11)", "momepy (>=0.7.2)", "osmnx (>=1.9)", "scikit-learn (>=1.5)", "seaborn (>=0.13)"] +extra = ["lxml (>=4.6)", "pydot (>=3.0.1)", "pygraphviz (>=1.14)", "sympy (>=1.10)"] +test = ["pytest (>=7.2)", "pytest-cov (>=4.0)"] + [[package]] name = "notebook" -version = "7.3.2" +version = "7.4.2" description = "Jupyter Notebook - A web-based notebook environment for interactive computing" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "notebook-7.3.2-py3-none-any.whl", hash = "sha256:e5f85fc59b69d3618d73cf27544418193ff8e8058d5bf61d315ce4f473556288"}, - {file = "notebook-7.3.2.tar.gz", hash = "sha256:705e83a1785f45b383bf3ee13cb76680b92d24f56fb0c7d2136fe1d850cd3ca8"}, + {file = "notebook-7.4.2-py3-none-any.whl", hash = "sha256:9ccef602721aaa5530852e3064710b8ae5415c4e2ce26f8896d0433222755259"}, + {file = "notebook-7.4.2.tar.gz", hash = "sha256:e739defd28c3f615a6bfb0a2564bd75018a9cc6613aa00bbd9c15e68eed2de1b"}, ] [package.dependencies] jupyter-server = ">=2.4.0,<3" -jupyterlab = ">=4.3.4,<4.4" +jupyterlab = ">=4.4.0,<4.5" jupyterlab-server = ">=2.27.1,<3" notebook-shim = ">=0.2,<0.3" tornado = ">=6.2.0" @@ -3295,7 +3259,7 @@ tornado = ">=6.2.0" [package.extras] dev = ["hatch", "pre-commit"] docs = ["myst-parser", "nbsphinx", "pydata-sphinx-theme", "sphinx (>=1.3.6)", "sphinxcontrib-github-alt", "sphinxcontrib-spelling"] -test = ["importlib-resources (>=5.0)", "ipykernel", "jupyter-server[test] (>=2.4.0,<3)", "jupyterlab-server[test] (>=2.27.1,<3)", "nbval", "pytest (>=7.0)", "pytest-console-scripts", "pytest-timeout", "pytest-tornasync", "requests"] +test = ["importlib-resources (>=5.0) ; python_version < \"3.10\"", "ipykernel", "jupyter-server[test] (>=2.4.0,<3)", "jupyterlab-server[test] (>=2.27.1,<3)", "nbval", "pytest (>=7.0)", "pytest-console-scripts", "pytest-timeout", "pytest-tornasync", "requests"] [[package]] name = "notebook-shim" @@ -3304,7 +3268,6 @@ description = "A shim layer for notebook traits and config" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "notebook_shim-0.2.4-py3-none-any.whl", hash = "sha256:411a5be4e9dc882a074ccbcae671eda64cceb068767e9a3419096986560e1cef"}, {file = "notebook_shim-0.2.4.tar.gz", hash = "sha256:b4b2cfa1b65d98307ca24361f5b30fe785b53c3fd07b7a47e89acb5e6ac638cb"}, @@ -3323,7 +3286,6 @@ description = "Modules to convert numbers to words. Easily extensible." optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "num2words-0.5.14-py3-none-any.whl", hash = "sha256:1c8e5b00142fc2966fd8d685001e36c4a9911e070d1b120e1beb721fa1edb33d"}, {file = "num2words-0.5.14.tar.gz", hash = "sha256:b066ec18e56b6616a3b38086b5747daafbaa8868b226a36127e0451c0cf379c6"}, @@ -3339,7 +3301,6 @@ description = "Fundamental package for array computing in Python" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "numpy-1.26.4-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:9ff0f4f29c51e2803569d7a51c2304de5554655a60c5d776e35b4a41413830d0"}, {file = "numpy-1.26.4-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:2e4ee3380d6de9c9ec04745830fd9e2eccb3e6cf790d39d7b98ffd19b0dd754a"}, @@ -3381,15 +3342,14 @@ files = [ [[package]] name = "oaklib" -version = "0.6.19" +version = "0.6.22" description = "Ontology Access Kit: Python library for common ontology operations over a variety of backends" optional = false python-versions = "<4.0.0,>=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "oaklib-0.6.19-py3-none-any.whl", hash = "sha256:8b31cacfc525d00b66bf5953a7b3dfbae000b3d115ec9c4e4aad51b49a577840"}, - {file = "oaklib-0.6.19.tar.gz", hash = "sha256:6ce85ddc5076e1a5f5e2a56a80e85eb712817052d61eb174cabc2bffe05561a2"}, + {file = "oaklib-0.6.22-py3-none-any.whl", hash = "sha256:c945538c071da6682ca5ebc04eb02d4e85b770aea94f4540fd6dcc6e3ce9becc"}, + {file = "oaklib-0.6.22.tar.gz", hash = "sha256:bd557aeab6d8aca7ef8840f8e68da66110e33447f946107dc9f463a500a27674"}, ] [package.dependencies] @@ -3424,6 +3384,7 @@ sssom = ">=0.4.4,<0.5.0" tenacity = ">=8.2.3" [package.extras] +bioservices = ["bioservices"] gilda = ["gilda (>=1.0.0)", "urllib3 (<2)"] llm = ["aiohttp", "html2text", "llm (>=0.14,<0.15)"] semsimian = ["semsimian (>=0.2.18)"] @@ -3435,7 +3396,6 @@ description = "A generic, spec-compliant, thorough implementation of the OAuth r optional = false python-versions = ">=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "oauthlib-3.2.2-py3-none-any.whl", hash = "sha256:8139f29aac13e25d502680e9e19963e83f16838d48a0d71c287fe40e7067fbca"}, {file = "oauthlib-3.2.2.tar.gz", hash = "sha256:9859c40929662bec5d64f34d01c99e093149682a3f38915dc0655d5a633dd918"}, @@ -3453,7 +3413,6 @@ description = "A client to the EBI Ontology Lookup Service" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ols_client-0.1.4-py3-none-any.whl", hash = "sha256:7bdca0590042e07cc7ee3ef3fba99c3b6862cde6c8835afb129de31284b3e010"}, {file = "ols_client-0.1.4.tar.gz", hash = "sha256:cd2a0f39107f39eaf0f40b9098f12d442cf3d43e28228e63feb407d0aeb44470"}, @@ -3477,7 +3436,6 @@ description = "COGS Operates Google Sheets" optional = false python-versions = ">=3.6, <4" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ontodev-cogs-0.3.3.tar.gz", hash = "sha256:04cf448eda59e0645c6626453f7617a6b2be3129c8586c4d4a515ad031f61a18"}, {file = "ontodev_cogs-0.3.3-py3-none-any.whl", hash = "sha256:b3299b7884891d00e016f9cb0329a1a0dc8af4bfba45dce3815f654360b1f333"}, @@ -3500,7 +3458,6 @@ description = "A client to BioPortal and other OntoPortal instances." optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ontoportal_client-0.0.4-py3-none-any.whl", hash = "sha256:0dedd4ce003e0b6c1128fa05101e57bcc128ad79a6c9fcae66037d2447706c4c"}, {file = "ontoportal_client-0.0.4.tar.gz", hash = "sha256:1bf7edcb94db3ed68ea9a64c620056f0517f7e209826b05dbfda8fe27384fa48"}, @@ -3516,15 +3473,15 @@ tests = ["coverage", "pytest", "unittest-templates"] [[package]] name = "openai" -version = "1.61.1" +version = "1.78.1" description = "The official Python library for the openai API" optional = true python-versions = ">=3.8" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ - {file = "openai-1.61.1-py3-none-any.whl", hash = "sha256:72b0826240ce26026ac2cd17951691f046e5be82ad122d20a8e1b30ca18bd11e"}, - {file = "openai-1.61.1.tar.gz", hash = "sha256:ce1851507218209961f89f3520e06726c0aa7d0512386f0f977e3ac3e4f2472e"}, + {file = "openai-1.78.1-py3-none-any.whl", hash = "sha256:7368bf147ca499804cc408fe68cdb6866a060f38dec961bbc97b04f9d917907e"}, + {file = "openai-1.78.1.tar.gz", hash = "sha256:8b26b364531b100df1b961d03560042e5f5be11301d7d49a6cd1a2b9af824dca"}, ] [package.dependencies] @@ -3539,7 +3496,8 @@ typing-extensions = ">=4.11,<5" [package.extras] datalib = ["numpy (>=1)", "pandas (>=1.2.3)", "pandas-stubs (>=1.1.0.11)"] -realtime = ["websockets (>=13,<15)"] +realtime = ["websockets (>=13,<16)"] +voice-helpers = ["numpy (>=2.0.2)", "sounddevice (>=0.5.1)"] [[package]] name = "openpyxl" @@ -3548,7 +3506,6 @@ description = "A Python library to read/write Excel 2010 xlsx/xlsm files" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "openpyxl-3.1.5-py2.py3-none-any.whl", hash = "sha256:5282c12b107bffeef825f4617dc029afaf41d0ea60823bbb665ef3079dc79de2"}, {file = "openpyxl-3.1.5.tar.gz", hash = "sha256:cf0e3cf56142039133628b5acffe8ef0c12bc902d2aadd3e0fe5878dc08d1050"}, @@ -3564,7 +3521,6 @@ description = "A decorator to automatically detect mismatch when overriding a me optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "overrides-7.7.0-py3-none-any.whl", hash = "sha256:c7ed9d062f78b8e4c1a7b70bd8796b35ead4d9f510227ef9c5dc7626c60d7e49"}, {file = "overrides-7.7.0.tar.gz", hash = "sha256:55158fa3d93b98cc75299b1e67078ad9003ca27945c76162c1c0766d6f91820a"}, @@ -3572,15 +3528,14 @@ files = [ [[package]] name = "packaging" -version = "24.2" +version = "25.0" description = "Core utilities for Python packages" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "packaging-24.2-py3-none-any.whl", hash = "sha256:09abb1bccd265c01f4a3aa3f7a7db064b36514d2cba19a2f694fe6150451a759"}, - {file = "packaging-24.2.tar.gz", hash = "sha256:c228a6dc5e932d346bc5739379109d49e8853dd8223571c7c5b55260edc0b97f"}, + {file = "packaging-25.0-py3-none-any.whl", hash = "sha256:29572ef2b1f17581046b3a2227d5c611fb25ec70ca1ba8554b24b0e69331a484"}, + {file = "packaging-25.0.tar.gz", hash = "sha256:d443872c98d677bf60f6a1f2f8c1cb748e8fe762d2bf9d3148b5599295b0fc4f"}, ] [[package]] @@ -3590,7 +3545,6 @@ description = "Powerful data structures for data analysis, time series, and stat optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pandas-2.2.3-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:1948ddde24197a0f7add2bdc4ca83bf2b1ef84a1bc8ccffd95eda17fd836ecb5"}, {file = "pandas-2.2.3-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:381175499d3802cde0eabbaf6324cce0c4f5d52ca6f8c377c29ad442f50f6348"}, @@ -3673,34 +3627,35 @@ xml = ["lxml (>=4.9.2)"] [[package]] name = "pandera" -version = "0.22.1" +version = "0.23.1" description = "A light-weight and flexible data validation and testing tool for statistical data objects." optional = false -python-versions = ">=3.7" +python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "pandera-0.22.1-py3-none-any.whl", hash = "sha256:2a35531b4b533ac83e606a6dcc3cd41561774ff3d872117228e931f22e72f330"}, - {file = "pandera-0.22.1.tar.gz", hash = "sha256:091ebc353383ba642e5a20ee0df763ed2059ab99cb4b2ac3e83f482de8493645"}, + {file = "pandera-0.23.1-py3-none-any.whl", hash = "sha256:37f75cfb5e34db88afc07adf3ea07ba8738bca709f0e67799c8f1b2fc6b9c977"}, + {file = "pandera-0.23.1.tar.gz", hash = "sha256:2afed504ad61bbd2960dc7f85dd6be0b28d230a626f392b8ba05c291b970ae06"}, ] [package.dependencies] -numpy = ">=1.19.0" +numpy = ">=1.24.4" packaging = ">=20.0" -pandas = ">=1.2.0" +pandas = ">=2.1.1" pydantic = "*" typeguard = "*" typing_inspect = ">=0.6.0" [package.extras] -all = ["black", "dask[dataframe]", "fastapi", "frictionless (<=4.40.8)", "geopandas", "hypothesis (>=6.92.7)", "modin", "pandas-stubs", "polars (>=0.20.0)", "pyspark[connect] (>=3.2.0)", "pyyaml (>=5.1)", "ray", "scipy", "shapely"] -dask = ["dask[dataframe]"] +all = ["black", "dask[dataframe]", "distributed", "fastapi", "frictionless (<=4.40.8)", "geopandas", "hypothesis (>=6.92.7)", "modin", "pandas-stubs", "polars (>=0.20.0)", "pyspark[connect] (>=3.2.0)", "pyyaml (>=5.1)", "ray", "scipy", "shapely"] +dask = ["dask[dataframe]", "distributed"] +dev = ["hypothesis (>=6.92.7)", "importlib_metadata", "isort (>=5.7.0)", "joblib", "mypy (==1.10.0)", "nox", "pip", "pre_commit", "pyarrow", "pylint (<3.3)", "pytest", "pytest-asyncio", "pytest-cov", "pytest-xdist", "python-multipart", "pytz", "uvicorn", "xdoctest"] +docs = ["furo", "grpcio", "myst-nb", "ray", "recommonmark", "sphinx", "sphinx-autodoc-typehints (<=1.14.1)", "sphinx-copybutton", "sphinx-design", "sphinx-docsearch", "types-click", "types-pytz", "types-pyyaml", "types-requests", "types-setuptools"] fastapi = ["fastapi"] geopandas = ["geopandas", "shapely"] hypotheses = ["scipy"] io = ["black", "frictionless (<=4.40.8)", "pyyaml (>=5.1)"] -modin = ["dask[dataframe]", "modin", "ray"] -modin-dask = ["dask[dataframe]", "modin"] +modin = ["dask[dataframe]", "distributed", "modin", "ray"] +modin-dask = ["dask[dataframe]", "distributed", "modin"] modin-ray = ["modin", "ray"] mypy = ["pandas-stubs"] polars = ["polars (>=0.20.0)"] @@ -3714,7 +3669,6 @@ description = "Utilities for writing pandoc filters in python" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pandocfilters-1.5.1-py2.py3-none-any.whl", hash = "sha256:93be382804a9cdb0a7267585f157e5d1731bbe5545a85b268d6f5fe6232de2bc"}, {file = "pandocfilters-1.5.1.tar.gz", hash = "sha256:002b4a555ee4ebc03f8b66307e287fa492e4a77b4ea14d3f934328297bb4939e"}, @@ -3727,7 +3681,6 @@ description = "sqldf for pandas" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pansql-0.0.1-py3-none-any.whl", hash = "sha256:0c49d8c23e418ac065af767ed350c544c0d6d96dc04e2faa1f8b37851d404988"}, {file = "pansql-0.0.1.tar.gz", hash = "sha256:61091112442c5d663ea5c042b6327a9b6b94c6687831677dddda46f292532e29"}, @@ -3745,7 +3698,6 @@ description = "parse() is the opposite of format()" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "parse-1.20.2-py2.py3-none-any.whl", hash = "sha256:967095588cb802add9177d0c0b6133b5ba33b1ea9007ca800e526f42a85af558"}, {file = "parse-1.20.2.tar.gz", hash = "sha256:b41d604d16503c79d81af5165155c0b20f6c8d6c559efa66b4b695c3e5a0a0ce"}, @@ -3758,7 +3710,6 @@ description = "A Python Parser" optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "parso-0.8.4-py2.py3-none-any.whl", hash = "sha256:a418670a20291dacd2dddc80c377c5c3791378ee1e8d12bffc35420643d43f18"}, {file = "parso-0.8.4.tar.gz", hash = "sha256:eb3a7b58240fb99099a345571deecc0f9540ea5f4dd2fe14c2a99d6b281ab92d"}, @@ -3775,7 +3726,7 @@ description = "Pexpect allows easy control of interactive console applications." optional = false python-versions = "*" groups = ["dev"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and sys_platform != \"win32\"" +markers = "sys_platform != \"win32\" and sys_platform != \"emscripten\" or python_version < \"3.11\" and sys_platform != \"win32\"" files = [ {file = "pexpect-4.9.0-py2.py3-none-any.whl", hash = "sha256:7236d1e080e4936be2dc3e326cec0af72acf9212a7e1d060210e70a47e253523"}, {file = "pexpect-4.9.0.tar.gz", hash = "sha256:ee7d41123f3c9911050ea2c2dac107568dc43b2d3b0c7557a33212c398ead30f"}, @@ -3786,34 +3737,33 @@ ptyprocess = ">=0.5" [[package]] name = "pip" -version = "25.0" +version = "25.1.1" description = "The PyPA recommended tool for installing Python packages." optional = true -python-versions = ">=3.8" +python-versions = ">=3.9" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ - {file = "pip-25.0-py3-none-any.whl", hash = "sha256:b6eb97a803356a52b2dd4bb73ba9e65b2ba16caa6bcb25a7497350a4e5859b65"}, - {file = "pip-25.0.tar.gz", hash = "sha256:8e0a97f7b4c47ae4a494560da84775e9e2f671d415d8d828e052efefb206b30b"}, + {file = "pip-25.1.1-py3-none-any.whl", hash = "sha256:2913a38a2abf4ea6b64ab507bd9e967f3b53dc1ede74b01b0931e1ce548751af"}, + {file = "pip-25.1.1.tar.gz", hash = "sha256:3de45d411d308d5054c2168185d8da7f9a2cd753dbac8acbfa88a8909ecd9077"}, ] [[package]] name = "platformdirs" -version = "4.3.6" +version = "4.3.8" description = "A small Python package for determining appropriate platform-specific dirs, e.g. a `user data dir`." optional = false -python-versions = ">=3.8" +python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "platformdirs-4.3.6-py3-none-any.whl", hash = "sha256:73e575e1408ab8103900836b97580d5307456908a03e92031bab39e4554cc3fb"}, - {file = "platformdirs-4.3.6.tar.gz", hash = "sha256:357fb2acbc885b0419afd3ce3ed34564c13c9b95c89360cd9563f73aa5e2b907"}, + {file = "platformdirs-4.3.8-py3-none-any.whl", hash = "sha256:ff7059bb7eb1179e2685604f4aaf157cfd9535242bd23742eadc3c13542139b4"}, + {file = "platformdirs-4.3.8.tar.gz", hash = "sha256:3d512d96e16bcb959a814c9f348431070822a6496326a4be0911c40b5a74c2bc"}, ] [package.extras] -docs = ["furo (>=2024.8.6)", "proselint (>=0.14)", "sphinx (>=8.0.2)", "sphinx-autodoc-typehints (>=2.4)"] -test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=8.3.2)", "pytest-cov (>=5)", "pytest-mock (>=3.14)"] -type = ["mypy (>=1.11.2)"] +docs = ["furo (>=2024.8.6)", "proselint (>=0.14)", "sphinx (>=8.1.3)", "sphinx-autodoc-typehints (>=3)"] +test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=8.3.4)", "pytest-cov (>=6)", "pytest-mock (>=3.14)"] +type = ["mypy (>=1.14.1)"] [[package]] name = "pluggy" @@ -3822,7 +3772,6 @@ description = "plugin and hook calling mechanisms for python" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pluggy-1.5.0-py3-none-any.whl", hash = "sha256:44e1ad92c8ca002de6377e165f3e0f1be63266ab4d554740532335b9d75ea669"}, {file = "pluggy-1.5.0.tar.gz", hash = "sha256:2cffa88e94fdc978c4c574f15f9e59b7f4201d439195c3715ca9e2486f1d0cf1"}, @@ -3832,19 +3781,6 @@ files = [ dev = ["pre-commit", "tox"] testing = ["pytest", "pytest-benchmark"] -[[package]] -name = "ply" -version = "3.11" -description = "Python Lex & Yacc" -optional = false -python-versions = "*" -groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" -files = [ - {file = "ply-3.11-py2.py3-none-any.whl", hash = "sha256:096f9b8350b65ebd2fd1346b12452efe5b9607f7482813ffca50c22722a807ce"}, - {file = "ply-3.11.tar.gz", hash 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languages generated from Snowball algorithms." optional = false -python-versions = "*" +python-versions = "!=3.0.*,!=3.1.*,!=3.2.*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ - {file = "snowballstemmer-2.2.0-py2.py3-none-any.whl", hash = "sha256:c8e1716e83cc398ae16824e5572ae04e0d9fc2c6b985fb0f900f5f0c96ecba1a"}, - {file = "snowballstemmer-2.2.0.tar.gz", hash = "sha256:09b16deb8547d3412ad7b590689584cd0fe25ec8db3be37788be3810cbf19cb1"}, + {file = "snowballstemmer-3.0.1-py3-none-any.whl", hash = "sha256:6cd7b3897da8d6c9ffb968a6781fa6532dce9c3618a4b127d920dab764a19064"}, + {file = "snowballstemmer-3.0.1.tar.gz", hash = "sha256:6d5eeeec8e9f84d4d56b847692bacf79bc2c8e90c7f80ca4444ff8b6f2e52895"}, ] [[package]] @@ -5477,7 +5350,6 @@ description = "Sorted Containers -- Sorted List, Sorted Dict, Sorted Set" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ 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"sha256:4875a9eaf72fbf5079dc372a51a9f268fc38d46f767cbf85c43a36da5cb9b575"}, + {file = "widgetsnbextension-4.0.14.tar.gz", hash = "sha256:a3629b04e3edb893212df862038c7232f62973373869db5084aed739b437b5af"}, ] [[package]] @@ -6501,7 +6387,6 @@ description = "Module for decorators, wrappers and monkey patching." optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "wrapt-1.17.2-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:3d57c572081fed831ad2d26fd430d565b76aa277ed1d30ff4d40670b1c0dd984"}, {file = "wrapt-1.17.2-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:b5e251054542ae57ac7f3fba5d10bfff615b6c2fb09abeb37d2f1463f841ae22"}, @@ -6591,18 +6476,18 @@ description = "Backport of pathlib-compatible object wrapper for zip files" optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version < \"3.10\"" +markers = "python_version == \"3.9\"" files = [ {file = "zipp-3.21.0-py3-none-any.whl", hash = "sha256:ac1bbe05fd2991f160ebce24ffbac5f6d11d83dc90891255885223d42b3cd931"}, {file = "zipp-3.21.0.tar.gz", hash = "sha256:2c9958f6430a2040341a52eb608ed6dd93ef4392e02ffe219417c1b28b5dd1f4"}, ] [package.extras] -check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)"] +check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\""] cover = ["pytest-cov"] doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] enabler = ["pytest-enabler (>=2.2)"] -test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-ignore-flaky"] +test = ["big-O", "importlib-resources ; python_version < \"3.9\"", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-ignore-flaky"] type = ["pytest-mypy"] [extras] @@ -6615,4 +6500,4 @@ postgres = ["psycopg2-binary"] [metadata] lock-version = "2.1" python-versions = "^3.9" -content-hash = "6875551e277cc703a124e57f84d0fa65ba60e8a77f619f1e5786e6bd4d498b85" +content-hash = "4b28dc47b8f184aa29d583c834cdcec662bdf2aa8c51e60992eee7f572394c0d" diff --git a/pyproject.toml b/pyproject.toml index a481bf9..f12d534 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -32,7 +32,7 @@ packages = [ [tool.poetry.dependencies] python = "^3.9" -linkml = "^1.7.4" +linkml = "^1.9.1" pandas = ">=1.3.5" python-dateutil = ">=2.8.2" quantulum3 = ">=0.7.9" @@ -45,8 +45,8 @@ oaklib = ">=0.5.25" pandera = ">=0.12.0" tomlkit = ">=0.11.4" inflect = ">=6.0.0" -schemasheets = ">=0.1.24" -linkml-runtime = "^1.7.2" +schemasheets = "^0.4.0" +linkml-runtime = "^1.9.2" duckdb = { version = "^0.10.1", optional = true } click = "^8.1.7" deprecated = "^1.2.15" @@ -59,6 +59,7 @@ numpy = "<2.0" pydbml = "^1.1.2" pyyaml = "^6.0.2" llm = {version = "^0.21", optional = true} +gspread = "^6.2.1" [tool.poetry.group.dev.dependencies] pytest = ">=7.1.1" From ab7ebbee8dc960de5fdfbda23b927450a3b78ac4 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 11:34:57 -0500 Subject: [PATCH 67/88] Try windows-latest build test --- .github/workflows/check-pull-request.yaml | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index dcacef0..91f9377 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -16,8 +16,7 @@ jobs: strategy: fail-fast: false matrix: - # os: [ ubuntu-latest, windows-latest ] - Exclude windows for now - os: [ ubuntu-latest ] + os: [ ubuntu-latest, windows-latest ] python-version: [ "3.9", "3.10" ] exclude: - os: windows-latest From b2db99c52400d2bce7e67723b36b97456e900a36 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 13:03:23 -0500 Subject: [PATCH 68/88] Test on all current Python versions --- .github/workflows/check-pull-request.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index dcacef0..1b037d6 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -18,7 +18,7 @@ jobs: matrix: # os: [ ubuntu-latest, windows-latest ] - Exclude windows for now os: [ ubuntu-latest ] - python-version: [ "3.9", "3.10" ] + python-version: [ "3.9", "3.10", "3.11", "3.12" , "3.13" ] exclude: - os: windows-latest python-version: "3.9" From 7027a236942eaaf02d79066d9c20d0b1e3ed86c4 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 13:19:37 -0500 Subject: [PATCH 69/88] Skip 3.13 due to scipy issues --- .github/workflows/check-pull-request.yaml | 3 +++ 1 file changed, 3 insertions(+) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index dcacef0..ad07ad0 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -25,6 +25,9 @@ jobs: runs-on: ${{ matrix.os }} + # Allow Python 3.13 to fail due to scipy not being available + continue-on-error: ${{ matrix.python-version == '3.13' }} + steps: #---------------------------------------------- From 32e5f4c768c62be04679fdc37a41e63b2dcd3fdf Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 13:23:29 -0500 Subject: [PATCH 70/88] Allow Python 3.13 to fail due to scipy --- .github/workflows/check-pull-request.yaml | 3 +++ 1 file changed, 3 insertions(+) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index 1b037d6..8282692 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -25,6 +25,9 @@ jobs: runs-on: ${{ matrix.os }} + # Allow Python 3.13 to fail due to scipy not being available yet + continue-on-error: ${{ matrix.python-version == '3.13' }} + steps: #---------------------------------------------- From 32f0243bd528c171403a200ebd944e3a103cd439 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 13:32:19 -0500 Subject: [PATCH 71/88] Test over all Python, enable windows --- .github/workflows/check-pull-request.yaml | 11 +- output.log | 177 ---------------------- 2 files changed, 7 insertions(+), 181 deletions(-) delete mode 100644 output.log diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index 91f9377..cfb3561 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -17,13 +17,16 @@ jobs: fail-fast: false matrix: os: [ ubuntu-latest, windows-latest ] - python-version: [ "3.9", "3.10" ] - exclude: - - os: windows-latest - python-version: "3.9" + python-version: [ "3.9", "3.10", "3.11", "3.12" , "3.13" ] + # exclude: + # - os: windows-latest + # python-version: "3.9" runs-on: ${{ matrix.os }} + # Allow Python 3.13 to fail due to scipy not being available yet + continue-on-error: ${{ matrix.python-version == '3.13' }} + steps: #---------------------------------------------- diff --git a/output.log b/output.log deleted file mode 100644 index a94b86e..0000000 --- a/output.log +++ /dev/null @@ -1,177 +0,0 @@ -============================= test session starts ============================== -platform linux -- Python 3.9.19, pytest-8.3.2, pluggy-1.5.0 -rootdir: /home/corey/Code/schema-automator -configfile: pyproject.toml -plugins: typeguard-4.3.0, anyio-4.4.0 -collected 44 items - -tests/test_annotators/test_bioportal_schema_annotator.py s [ 2%] -tests/test_annotators/test_jsonld_annotator.py . [ 4%] -tests/test_annotators/test_lov_schema_annotator.py s [ 6%] -tests/test_annotators/test_schema_enricher.py . [ 9%] -tests/test_generalizers/test_csv_data_generalizer.py ..... [ 20%] -tests/test_generalizers/test_fk_inference.py .. [ 25%] -tests/test_generalizers/test_from_robot_template.py . [ 27%] -tests/test_generalizers/test_json_data_generalizer.py .... [ 36%] -tests/test_generalizers/test_pandas_data_generalizer.py . [ 38%] -tests/test_generalizers/test_rdf_data_generalizer.py . [ 40%] -tests/test_importers/test_cadsr_importer.py .. [ 45%] -tests/test_importers/test_convert_shacl_owl_representation.py . [ 47%] -tests/test_importers/test_dbml_importer.py .. [ 52%] -tests/test_importers/test_dosdp_importer.py . [ 54%] -tests/test_importers/test_frictionless_importer.py . [ 56%] -tests/test_importers/test_from_owl_schemaorg.py s [ 59%] -tests/test_importers/test_jsonschema_importer.py ..... [ 70%] -tests/test_importers/test_kwalify_importer.py ... [ 77%] -tests/test_importers/test_owl_importer.py .. [ 81%] -tests/test_importers/test_rdfs_importer.py ssFs [ 90%] -tests/test_importers/test_sql_importer.py . [ 93%] -tests/test_importers/test_tabular_importer.py . [ 95%] -tests/test_utils/test_instance_extractor.py .. [100%] - -=================================== FAILURES =================================== -______________________________ test_infer_prefix _______________________________ - - def test_infer_prefix(): - """ - If the schema has no name, id or default prefix, the importer should infer them from prefix usage in the schema. - """ - rdf = StringIO(""" - @prefix rdfs: . - @prefix foo: . - - foo:Class a rdfs:Class ; - rdfs:comment "A class." . - - foo:prop a rdfs:Property ; - rdfs:comment "A property." . - """) - engine = RdfsImportEngine() -> schema = engine.convert(rdf) - -tests/test_importers/test_rdfs_importer.py:67: -_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ -schema_automator/importers/rdfs_import_engine.py:111: in convert - g.parse(file, format=format) -.venv/lib/python3.9/site-packages/rdflib/graph.py:1468: in parse - source = create_input_source( -_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ - -source = RdfsImportEngine(metamodel=SchemaView(schema=SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None...e', 'minimum_cardinality', 'key', 'subproperty_of', 'exact_cardinality'}, seen_prefixes=set(), prefix_counts=Counter()) -publicID = None, location = None, file = None, data = None, format = 'turtle' - - def create_input_source( - source: Optional[ - Union[IO[bytes], TextIO, InputSource, str, bytes, pathlib.PurePath] - ] = None, - publicID: Optional[str] = None, # noqa: N803 - location: Optional[str] = None, - file: Optional[Union[BinaryIO, TextIO]] = None, - data: Optional[Union[str, bytes, dict]] = None, - format: Optional[str] = None, - ) -> InputSource: - """ - Return an appropriate InputSource instance for the given - parameters. - """ - - # test that exactly one of source, location, file, and data is not None. - non_empty_arguments = list( - filter( - lambda v: v is not None, - [source, location, file, data], - ) - ) - - if len(non_empty_arguments) != 1: - raise ValueError( - "exactly one of source, location, file or data must be given", - ) - - input_source = None - - if source is not None: - if TYPE_CHECKING: - assert file is None - assert data is None - assert location is None - if isinstance(source, InputSource): - input_source = source - else: - if isinstance(source, str): - location = source - elif isinstance(source, pathlib.PurePath): - location = str(source) - elif isinstance(source, bytes): - data = source - elif hasattr(source, "read") and not isinstance(source, Namespace): - f = source - input_source = InputSource() - if hasattr(source, "encoding"): - input_source.setCharacterStream(source) - input_source.setEncoding(source.encoding) - try: - b = source.buffer # type: ignore[union-attr] - input_source.setByteStream(b) - except (AttributeError, LookupError): - input_source.setByteStream(source) - else: - input_source.setByteStream(f) - if f is sys.stdin: - input_source.setSystemId("file:///dev/stdin") - elif hasattr(f, "name"): - input_source.setSystemId(f.name) - else: -> raise Exception( - "Unexpected type '%s' for source '%s'" % (type(source), source) - ) -E Exception: Unexpected type '' for source 'RdfsImportEngine(metamodel=SchemaView(schema=SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The metamodel for schemas defined using the Linked Data Modeling Language framework.\n\nFor more information on LinkML:\n\n* [linkml.io](https://linkml.io) main website\n* [specification](https://w3id.org/linkml/docs/specification/)\n\nLinkML is self-describing. Every LinkML schema consists of elements\nthat instantiate classes in this metamodel.\n\nCore metaclasses:\n\n* [SchemaDefinition](https://w3id.org/linkml/SchemaDefinition)\n* [ClassDefinition](https://w3id.org/linkml/ClassDefinition)\n* [SlotDefinition](https://w3id.org/linkml/SlotDefinition)\n* [TypeDefinition](https://w3id.org/linkml/TypeDefinition)\n\nThere are many subsets of *profiles* of the metamodel, for different purposes:\n\n* [MinimalSubset](https://w3id.org/linkml/MinimalSubset)\n* [BasicSubset](https://w3id.org/linkml/BasicSubset)\n\nFor canonical reference documentation on any metamodel construct,\nrefer to the official URI for each construct, e.g.\n[https://w3id.org/linkml/is_a](https://w3id.org/linkml/is_a)', alt_descriptions={}, title='LinkML Schema Metamodel', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/meta', version=None, imports=['linkml:types', 'linkml:mappings', 'linkml:extensions', 'linkml:annotations', 'linkml:units'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'skosxl': Prefix(prefix_prefix='skosxl', prefix_reference='http://www.w3.org/2008/05/skos-xl#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'NCIT': Prefix(prefix_prefix='NCIT', prefix_reference='http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#'), 'pav': Prefix(prefix_prefix='pav', prefix_reference='http://purl.org/pav/'), 'oslc': Prefix(prefix_prefix='oslc', prefix_reference='http://open-services.net/ns/core#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/'), 'bibo': Prefix(prefix_prefix='bibo', prefix_reference='http://purl.org/ontology/bibo/'), 'swrl': Prefix(prefix_prefix='swrl', prefix_reference='http://www.w3.org/2003/11/swrl#'), 'sh': Prefix(prefix_prefix='sh', prefix_reference='http://www.w3.org/ns/shacl#'), 'owl': Prefix(prefix_prefix='owl', prefix_reference='http://www.w3.org/2002/07/owl#'), 'qb': Prefix(prefix_prefix='qb', prefix_reference='http://purl.org/linked-data/cube#'), 'prov': Prefix(prefix_prefix='prov', prefix_reference='http://www.w3.org/ns/prov#'), 'vann': Prefix(prefix_prefix='vann', prefix_reference='https://vocab.org/vann/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/'), 'cdisc': Prefix(prefix_prefix='cdisc', prefix_reference='http://rdf.cdisc.org/mms#'), 'SIO': Prefix(prefix_prefix='SIO', prefix_reference='http://semanticscience.org/resource/SIO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'dcterms', 'OIO', 'owl', 'pav'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={'MinimalSubset': SubsetDefinition(name='MinimalSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The absolute minimal set of elements necessary for defining any schema.\n\nschemas conforming to the minimal subset consist of classes, with all slots\ninlined as attributes. There are no enums.', alt_descriptions={}, title='minimal subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[]), 'BasicSubset': SubsetDefinition(name='BasicSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An extension of MinimalSubset that avoids advanced constructs and can be implemented by a broad variety of tools.\n\nThis subset roughly corresponds to the union of most standard constructs used in relational datamodel modeling,\nobject oriented modeling, and simple JSON-style modeling, while avoiding more advanced constructs from these languages.\n\nIt is often possible to translate from a more expressive schema to a BasicSubset schema, through a schema derivation\nprocess', alt_descriptions={}, title='basic subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[]), 'SpecificationSubset': SubsetDefinition(name='SpecificationSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A subset that includes all the metamodel elements that form part of the normative LinkML specification.\n\nThe complete LinkML specification can be found at [linkml:specification](https://w3id.org/linkml/specification)', alt_descriptions={}, title='specification subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[]), 'RelationalModelProfile': SubsetDefinition(name='RelationalModelProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using the classic Relational Model.\nThe Relational Model excludes collections (multivalued slots) as first class entities. Instead, these must be\nmapped to backreferences\n\nThe classic Relational Model excludes inheritance and polymorphism -- these must be rolled down to\nconcrete classes or otherwise transformed.', alt_descriptions={}, title='relational model profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[]), 'ObjectOrientedProfile': SubsetDefinition(name='ObjectOrientedProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using a minimal\nimplementation of the object oriented metamodel as employed by languages such as Java and Python, or\nin modeling frameworks like UML', alt_descriptions={}, title='object oriented profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[]), 'OwlProfile': SubsetDefinition(name='OwlProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed in OWL', alt_descriptions={}, title='owl profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, types={}, enums={'pv_formula_options': EnumDefinition(name='pv_formula_options', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The formula used to generate the set of permissible values from the code_set values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'CODE': PermissibleValue(text='CODE', description='The permissible values are the set of possible codes in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'CURIE': PermissibleValue(text='CURIE', description='The permissible values are the set of CURIES in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'URI': PermissibleValue(text='URI', description='The permissible values are the set of code URIs in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'FHIR_CODING': PermissibleValue(text='FHIR_CODING', description='The permissible values are the set of FHIR coding elements derived from the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'LABEL': PermissibleValue(text='LABEL', description='The permissible values are the set of human readable labels in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'presence_enum': EnumDefinition(name='presence_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of conditions by which a slot value should be set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'UNCOMMITTED': PermissibleValue(text='UNCOMMITTED', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PRESENT': PermissibleValue(text='PRESENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'ABSENT': PermissibleValue(text='ABSENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'relational_role_enum': EnumDefinition(name='relational_role_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of roles a slot on a relationship class can play', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'SUBJECT': PermissibleValue(text='SUBJECT', description='a slot with this role connects a relationship to its subject/source node', meaning='rdf:subject', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedSource'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OBJECT': PermissibleValue(text='OBJECT', description='a slot with this role connects a relationship to its object/target node', meaning='rdf:object', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedTarget'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PREDICATE': PermissibleValue(text='PREDICATE', description='a slot with this role connects a relationship to its predicate/property', meaning='rdf:predicate', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedProperty'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NODE': PermissibleValue(text='NODE', description='a slot with this role connects a symmetric relationship to a node that represents either subject or object node', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OTHER_ROLE': PermissibleValue(text='OTHER_ROLE', description='a slot with this role connects a relationship to a node that is not subject/object/predicate', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'alias_predicate_enum': EnumDefinition(name='alias_predicate_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='permissible values for the relationship between an element and an alias', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'EXACT_SYNONYM': PermissibleValue(text='EXACT_SYNONYM', description=None, meaning='skos:exactMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RELATED_SYNONYM': PermissibleValue(text='RELATED_SYNONYM', description=None, meaning='skos:relatedMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'BROAD_SYNONYM': PermissibleValue(text='BROAD_SYNONYM', description=None, meaning='skos:broaderMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NARROW_SYNONYM': PermissibleValue(text='NARROW_SYNONYM', description=None, meaning='skos:narrowerMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'obligation_level_enum': EnumDefinition(name='obligation_level_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'REQUIRED': PermissibleValue(text='REQUIRED', description='The metadata element is required to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RECOMMENDED': PermissibleValue(text='RECOMMENDED', description='The metadata element is recommended to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ENCOURAGED'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OPTIONAL': PermissibleValue(text='OPTIONAL', description='The metadata element is optional to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'EXAMPLE': PermissibleValue(text='EXAMPLE', description='The metadata element is an example of how to use the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'DISCOURAGED': PermissibleValue(text='DISCOURAGED', description='The metadata element is allowed but discouraged to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}, slots={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_name', 'https://linkml.io/linkml/faq/modeling.html#why-are-my-class-names-translated-to-camelcase'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['short name', 'unique name'], structured_aliases={}, mappings=[], exact_mappings=['schema:name'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'title': SlotDefinition(name='title', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A concise human-readable display label for the element. The title should mirror the name, and should use ordinary textual punctuation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['long name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:title', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'conforms_to': SlotDefinition(name='conforms_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An established standard to which the element conforms.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:implements'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:conformsTo', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implements': SlotDefinition(name='implements', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element conforms to. The referenced element is not imported into the schema for the implementing element. However, the referenced schema may be used to check conformance of the implementing element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'instantiates': SlotDefinition(name='instantiates', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element instantiates.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Controlled terms used to categorize an element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if you wish to use uncontrolled terms or terms that lack identifiers then use the keywords element'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='category', domain=None, slot_uri='dcterms:subject', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'structured_alias'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'keywords': SlotDefinition(name='keywords', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Keywords or tags used to describe the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='keyword', domain='element', slot_uri='schema:keywords', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'definition_uri': SlotDefinition(name='definition_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The native URI of the element. This is always within the namespace of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Formed by combining the default_prefix with the normalized element name'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:class_uri', 'linkml:slot_uri'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='filled in by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes': SlotDefinition(name='id_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An allowed list of prefixes for which identifiers must conform. The identifier of this class or slot must begin with the URIs referenced by this prefix', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Order of elements may be used to indicate priority order', 'If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by `:` (_should_ start if the list is open)', 'If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix (_should_ start if the list is open)'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml-model/issues/28'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes_are_closed': SlotDefinition(name='id_prefixes_are_closed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true, then the id_prefixes slot is treated as being closed, and any use of an id that does not have this prefix is considered a violation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/194'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'description': SlotDefinition(name='description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="a textual description of the element's purpose and use", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['definition'], structured_aliases={}, mappings=[], exact_mappings=['dcterms:description', 'schema:description'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:definition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_aliases': SlotDefinition(name='structured_aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of structured_alias objects, used to provide aliases in conjunction with additional metadata.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:aliases'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skosxl:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='structured_alias', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aliases': SlotDefinition(name='aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Alternate names/labels for the element. These do not alter the semantics of the schema, but may be useful to support search and alignment.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['not be confused with the metaslot alias.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['synonyms', 'alternate names', 'alternative labels', 'designations'], structured_aliases={}, mappings=[], exact_mappings=['schema:alternateName'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated': SlotDefinition(name='deprecated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Description of why and when this element will no longer be used', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note that linkml does not use a boolean to indicate deprecation status - the presence of a string value in this field is sufficient to indicate deprecation.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:deprecated'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'todos': SlotDefinition(name='todos', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Outstanding issues that needs resolution', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'notes': SlotDefinition(name='notes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='editorial notes about an element intended primarily for internal consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:editorialNote', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'comments': SlotDefinition(name='comments', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='notes and comments about an element intended primarily for external consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['rdfs:comment'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:note', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_subset': SlotDefinition(name='in_subset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='used to indicate membership of a term in a defined subset of terms used for a particular domain or application.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of use in the translator_minimal subset in the biolink model, holding the minimal set of predicates used in a translator knowledge graph'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='OIO:inSubset', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'from_schema': SlotDefinition(name='from_schema', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='id of the schema that defined the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["A stronger model would be range schema_definition, but this doesn't address the import model"], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:inScheme', array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imported_from': SlotDefinition(name='imported_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the imports entry that this element was derived from. Empty means primary source', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'see_also': SlotDefinition(name='see_also', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of related entities or URLs that may be of relevance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:seeAlso', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owned_by': SlotDefinition(name='owned_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that owns or is the steward of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['steward', 'owner'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:isDefinedBy'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_by': SlotDefinition(name='created_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that created the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'contributors': SlotDefinition(name='contributors', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that contributed to the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:contributor', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_on': SlotDefinition(name='created_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was created', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'last_updated_on': SlotDefinition(name='last_updated_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was last updated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:lastUpdatedOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'modified_by': SlotDefinition(name='modified_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that modified the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='oslc:modifiedBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'status': SlotDefinition(name='status', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='status of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bibo:draft', description=None, object=None)], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://www.hl7.org/fhir/valueset-publication-status.html', 'https://www.hl7.org/fhir/versions.html#std-process'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['workflow status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='bibo:status', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'literal_form': SlotDefinition(name='literal_form', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The literal lexical form of a structured alias; i.e the actual alias value.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alias_name', 'string_value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='skosxl:literalForm', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_predicate': SlotDefinition(name='alias_predicate', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The relationship between an element and its alias.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='rdf:predicate', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='predicate', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alias_predicate_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_contexts': SlotDefinition(name='alias_contexts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The context in which an alias should be applied', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='contexts', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_language': SlotDefinition(name='in_language', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.rfc-editor.org/rfc/bcp/bcp47.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='the primary language used in the sources', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Recommended to use a string from IETF BCP 47'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='schema:inLanguage', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source': SlotDefinition(name='source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A related resource from which the element is derived.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The described resource may be derived from the related resource in whole or in part'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['origin', 'derived from'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['prov:wasDerivedFrom', 'schema:isBasedOn'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:source', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'publisher': SlotDefinition(name='publisher', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An entity responsible for making the resource available', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:publisher', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class or slot from which inheritable metaslots are propagated from. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abstract': SlotDefinition(name='abstract', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot cannot be directly instantiated and is intended for grouping purposes.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixin': SlotDefinition(name='mixin', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot is intended to be inherited from without being an is_a parent. mixins should not be inherited from using is_a, except by other mixins.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['trait'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent classes or slots from which inheritable metaslots are propagated from.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierarchy, while keeping the benefits of multiple inheritance'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['traits'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class.", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'values_from': SlotDefinition(name='values_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The identifier of a "value set" -- a set of identifiers that form the possible values for the range of a slot. Note: this is different than \'subproperty_of\' in that \'subproperty_of\' is intended to be a single ontology term while \'values_from\' is the identifier of an entire value set. Additionally, this is different than an enumeration in that in an enumeration, the values of the enumeration are listed directly in the model itself. Setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set': SlotDefinition(name='code_set', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the identifier of an enumeration code set.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_version': SlotDefinition(name='code_set_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version identifier of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['we assume that version identifiers lexically sort in temporal order. Recommend semver when possible'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_tag': SlotDefinition(name='code_set_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version tag of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['enum_expression cannot have both a code_set_tag and a code_set_version'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pv_formula': SlotDefinition(name='pv_formula', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Defines the specific formula to be used to generate the permissible values.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['you cannot have BOTH the permissible_values and permissible_value_formula tag', 'code_set must be supplied for this to be valid'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pv_formula_options', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'permissible_values': SlotDefinition(name='permissible_values', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of possible values for a slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['coded values'], structured_aliases={}, mappings=[], exact_mappings=['cdisc:PermissibleValue'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_uri': SlotDefinition(name='enum_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the enum that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include': SlotDefinition(name='include', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be included, after subtracting the minus set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minus': SlotDefinition(name='minus', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be subtracted from the enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherits': SlotDefinition(name='inherits', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum definition that is used as the basis to create a new enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['All permissible values for all inherited enums are copied to form the initial seed set'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'matches': SlotDefinition(name='matches', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a match query that is used to calculate the list of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='match_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier_pattern': SlotDefinition(name='identifier_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A regular expression that is used to obtain a set of identifiers from a source_ontology to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='match_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'concepts': SlotDefinition(name='concepts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of identifiers that are used to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reachable_from': SlotDefinition(name='reachable_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a query for obtaining a list of permissible values based on graph reachability', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='reachability_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_ontology': SlotDefinition(name='source_ontology', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An ontology or vocabulary or terminology that is used in a query to obtain a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['examples include schema.org, wikidata, or an OBO ontology', 'for obo ontologies we recommend CURIEs of the form obo:cl, obo:envo, etc'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['terminology', 'vocabulary'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_direct': SlotDefinition(name='is_direct', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the reachability query should only include directly related nodes, if False then include also transitively connected', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['non-transitive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse_up': SlotDefinition(name='traverse_up', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the direction of the reachability query is reversed and ancestors are retrieved', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestors'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include_self': SlotDefinition(name='include_self', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the query is reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reflexive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relationship_types': SlotDefinition(name='relationship_types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of relationship types (properties) that are used in a reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['predicates', 'properties'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_nodes': SlotDefinition(name='source_nodes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of nodes that are used in the reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'text': SlotDefinition(name='text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The actual permissible value itself', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['there are no constraints on the text of the permissible value, but for many applications you may want to consider following idiomatic forms and using computer-friendly forms'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:notation'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'meaning': SlotDefinition(name='meaning', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value meaning of a permissible value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['we may want to change the range of this (and other) elements in the model to an entitydescription type construct'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/ISO/IEC_11179'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV meaning'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id': SlotDefinition(name='id', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The official schema URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'emit_prefixes': SlotDefinition(name='emit_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'version': SlotDefinition(name='version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='particular version of schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:schemaVersion'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='pav:version', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imports': SlotDefinition(name='imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of schemas that are to be included in this schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_imports': SlotDefinition(name='structured_imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of specifications for how to import elements from external schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='import_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'license': SlotDefinition(name='license', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='license for the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='dcterms:license', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_curi_maps': SlotDefinition(name='default_curi_maps', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_prefix': SlotDefinition(name='default_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix that is used for all elements within a schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='default_ns', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_range': SlotDefinition(name='default_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='default slot range to be used if range element is omitted from a slot definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subsets': SlotDefinition(name='subsets', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all subset definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['OIO:hasSubset'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'types': SlotDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all type definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enums': SlotDefinition(name='enums', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all enum definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_definitions': SlotDefinition(name='slot_definitions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all slot definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note the formal name of this element is slot_definitions, but it has alias slots, which is the canonical form used in yaml/json serializes of schemas.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='slots', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classes': SlotDefinition(name='classes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all class definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'metamodel_version': SlotDefinition(name='metamodel_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Version of the metamodel used to load the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file': SlotDefinition(name='source_file', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name, uri or description of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_date': SlotDefinition(name='source_file_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='modification date of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_size': SlotDefinition(name='source_file_size', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='size in bytes of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'generation_date': SlotDefinition(name='generation_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='date and time that the schema was loaded/generated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slots': SlotDefinition(name='slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='collection of slot names that are applicable to a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the list of applicable slots is inherited from parent classes', 'This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_usage': SlotDefinition(name='slot_usage', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the refinement of a slot in the context of the containing class definition.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_range': SlotDefinition(name='enum_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An inlined enumeration', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range_expression': SlotDefinition(name='range_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A range that is described as a boolean expression combining existing ranges', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['one use for this is being able to describe a range using any_of expressions, for example to combine two enums'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['path_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean_slot': SlotDefinition(name='boolean_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A grouping of slots that expression a boolean operator over a list of operands', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if at least one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:or'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=101, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if only one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:xone'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=103, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if none of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:not'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=105, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if all of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:and'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=107, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'preconditions': SlotDefinition(name='preconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold in order for the rule to be applicable to an instance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if', 'body', 'antecedents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=111, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:condition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'postconditions': SlotDefinition(name='postconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['then', 'head', 'consequents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=113, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elseconditions': SlotDefinition(name='elseconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions no not hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['else'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=115, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bidirectional': SlotDefinition(name='bidirectional', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in addition to preconditions entailing postconditions, the postconditions entail the preconditions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['iff', 'if and only if'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'open_world': SlotDefinition(name='open_world', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rank': SlotDefinition(name='rank', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the relative order in which the element occurs, lower values are given precedence', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the rank of an element does not affect the semantics'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['order', 'precedence', 'display order'], structured_aliases={}, mappings=[], exact_mappings=['qudt:order', 'qb:order'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:order', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'class_rule'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deactivated': SlotDefinition(name='deactivated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a deactivated rule is not executed by the rules engine', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:deactivated', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the collection of rules that apply to all members of this class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri='sh:rule', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classification_rules': SlotDefinition(name='classification_rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The collection of classification rules that apply to all members of this class. Classification rules allow for automatically assigning the instantiated type of an instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_conditions': SlotDefinition(name='slot_conditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='expresses constraints on a group of slots for a class expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'attributes': SlotDefinition(name='attributes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Inline definition of slots', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'class_uri': SlotDefinition(name='class_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning class_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subclass_of': SlotDefinition(name='subclass_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='DEPRECATED -- rdfs:subClassOf to be emitted in OWL generation', alt_descriptions={}, title=None, deprecated='Use is_a instead', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:subClassOf'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'defining_slots': SlotDefinition(name='defining_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that the domain element consists exactly of the members of the element in the range.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['this only applies in the OWL generation'], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tree_root': SlotDefinition(name='tree_root', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates that this is the Container class which forms the root of the serialized document structure in tree serializations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['each schema should have at most one tree root'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/intro/tutorial02.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_keys': SlotDefinition(name='unique_keys', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of named unique keys for this class. Unique keys may be singular or compound.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#unique-key'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:hasKey'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='unique_key', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_name': SlotDefinition(name='unique_key_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unique key', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'consider_nulls_inequal': SlotDefinition(name='consider_nulls_inequal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='By default, None values are considered equal for the purposes of comparisons in determining uniqueness. Set this to true to treat missing values as per ANSI-SQL NULLs, i.e NULL=NULL is always False.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_slots': SlotDefinition(name='unique_key_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='list of slot names that form a key. The tuple formed from the values of all these slots should be unique.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_names_unique': SlotDefinition(name='slot_names_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then induced/mangled slot names are not created for class_usage and attributes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain': SlotDefinition(name='domain', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the subject of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts that X is an instance of C1\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the object of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts Y is an instance of C2\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['range is underspecified, as not all elements can appear as the range of a slot.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value domain'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent='default_range', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['enum_binding', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_uri': SlotDefinition(name='slot_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the slot in a linked data context. The URI may come from any namespace and may be shared between schemas.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning slot_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='slot_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'multivalued': SlotDefinition(name='multivalued', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that slot can have more than one value and should be represented using a list or collection structure.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'array': SlotDefinition(name='array', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='coerces the value of the slot into an array and defines the dimensions of that array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='array_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dimensions': SlotDefinition(name='dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='definitions of each axis in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['axes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=True, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='dimension_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_number_dimensions': SlotDefinition(name='minimum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='minimum number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_number_dimensions': SlotDefinition(name='maximum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='maximum number of dimensions in the array, or False if explicitly no maximum. If this is unset, and an explicit list of dimensions are passed using dimensions, then this is interpreted as a closed list and the maximum_number_dimensions is the length of the dimensions list, unless this value is set to False', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_number_dimensions cannot be less than minimum_number_dimensions'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])], all_of=[]), 'exact_number_dimensions': SlotDefinition(name='exact_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='exact number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_number_dimensions is set, then minimum_number_dimensions and maximum_number_dimensions must be unset or have the same value'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherited': SlotDefinition(name='inherited', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the *value* of a slot is inherited by subclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only', 'Inherited applies to slot values. Parent *slots* are always inherited by subclasses'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'readonly': SlotDefinition(name='readonly', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If present, slot is read only. Text explains why', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ifabsent': SlotDefinition(name='ifabsent', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='function that provides a default value for the slot.\n * [Tt]rue -- boolean True\n * [Ff]alse -- boolean False\n * bnode -- blank node identifier\n * class_curie -- CURIE for the containing class\n * class_uri -- URI for the containing class\n * default_ns -- schema default namespace\n * default_range -- schema default range\n * int(value) -- integer value\n * slot_uri -- URI for the slot\n * slot_curie -- CURIE for the slot\n * string(value) -- string value\n * EnumName(PermissibleValue) -- enum value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:equals_expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:defaultValue'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implicit_prefix': SlotDefinition(name='implicit_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Causes the slot value to be interpreted as a uriorcurie after prefixing with this string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_specification_constant': SlotDefinition(name='value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain the a slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_value_specification_constant': SlotDefinition(name='list_value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_presence': SlotDefinition(name='value_presence', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if PRESENT then a value must be present (for lists there must be at least one value). If ABSENT then a value must be absent (for lists, must be empty)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='presence_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string': SlotDefinition(name='equals_string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number': SlotDefinition(name='equals_number', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range of a number and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_expression': SlotDefinition(name='equals_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot must equal the value of the evaluated expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["for example, a 'length' slot may have an equals_expression with value '(end-start)+1'"], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/developers/inference.html', 'https://linkml.io/linkml/schemas/advanced.html#equals-expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact_cardinality': SlotDefinition(name='exact_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the exact number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_cardinality is set, then minimum_cardinalty and maximum_cardinality must be unset or have the same value'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_cardinality': SlotDefinition(name='minimum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the minimum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_cardinality': SlotDefinition(name='maximum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the maximum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_cardinality cannot be less than minimum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string_in': SlotDefinition(name='equals_string_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number_in': SlotDefinition(name='equals_number_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range number and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_member': SlotDefinition(name='has_member', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with at least one member satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_members': SlotDefinition(name='all_members', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with all members satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'singular_name': SlotDefinition(name='singular_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name that is used in the singular form', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this may be used in some schema translations where use of a singular form is idiomatic, for example RDF'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:altLabel'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'required': SlotDefinition(name='required', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot must be present in instances of the class definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'recommended': SlotDefinition(name='recommended', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot should be present in instances of the class definition, but this is not required', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['This is to be used where not all data is expected to conform to having a required field', 'If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/177'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inapplicable': SlotDefinition(name='inapplicable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that values for this slot must not be present', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['By default all slots are applicable. The main use case for this slot is as an override in a subclass'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined': SlotDefinition(name='inlined', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['classes without keys or identifiers are necessarily inlined as lists', 'only applicable in tree-like serializations, e.g json, yaml'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_list': SlotDefinition(name='inlined_as_list', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The default loader will accept either list or dictionary form as input. This parameter controls internal\nrepresentation and output.', 'A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key\nis the key or identifier and whose value is the one additional element. This form is still stored according\nto the inlined_as_list setting.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_simple_dict': SlotDefinition(name='inlined_as_simple_dict', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a simple dict whose values are all atoms', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=28, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_ordered': SlotDefinition(name='list_elements_ordered', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the order of elements of a multivalued slot is guaranteed to be preserved. If False, the order may still be preserved but this is not guaranteed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_unique': SlotDefinition(name='list_elements_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then there must be no duplicates in the elements of a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shared': SlotDefinition(name='shared', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the relationship between the slot domain and range is many to one or many to many', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inverse functional', 'many to one or many'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'key': SlotDefinition(name='key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identify the elements within a single container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['key is inherited', 'a given domain can have at most one key slot (restriction to be removed in the future)', 'identifiers and keys are mutually exclusive. A given domain cannot have both', 'a key slot is automatically required. Keys cannot be optional'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier': SlotDefinition(name='identifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identifies the elements. There can be at most one identifier or key per container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['identifier is inherited', 'a key slot is automatically required. Identifiers cannot be optional', 'a given domain can have at most one identifier', 'identifiers and keys are mutually exclusive. A given domain cannot have both'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Identifier', 'linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary key', 'ID', 'UID', 'code'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'designates_type': SlotDefinition(name='designates_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/type-designators.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['type designator'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias': SlotDefinition(name='alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of alias is used within this metamodel, slot_definitions is aliases as slots', 'not to be confused with aliases, which indicates a set of terms to be used for search purposes.'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='skos:prefLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owner': SlotDefinition(name='owner', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the "owner" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot', alt_descriptions={}, title=None, deprecated='Will be replaced by domain_of and eventually removed', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by loader -- either class domain or slot domain', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain_of': SlotDefinition(name='domain_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the class(es) that reference the slot in a "slots" or "slot_usage" context', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:domainIncludes', 'SIO:000011'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_usage_slot': SlotDefinition(name='is_usage_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that this slot was defined in a slot_usage situation', alt_descriptions={}, title=None, deprecated='Replaced by usage_slot_name', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'usage_slot_name': SlotDefinition(name='usage_slot_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of the slot referenced in the slot_usage', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subproperty_of': SlotDefinition(name='subproperty_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Ontology property which this slot is a subproperty of. Note: setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='RO:HOM0000001', description='this is the RO term for "in homology relationship with", and used as a value of subproperty of this means that any ontological child (related to RO:HOM0000001 via an is_a relationship), is a valid value for the slot that declares this with the subproperty_of tag. This differs from the \'values_from\' meta model component in that \'values_from\' requires the id of a value set (said another way, if an entire ontology had a curie/identifier that was the identifier for the entire ontology, then that identifier would be used in \'values_from.\')', object=None)], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='rdfs:subPropertyOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'children_are_mutually_disjoint': SlotDefinition(name='children_are_mutually_disjoint', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true then all direct is_a children are mutually disjoint and share no instances in common', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_logical_characteristic': SlotDefinition(name='relational_logical_characteristic', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract grouping for metaslots that describe logical properties of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symmetric': SlotDefinition(name='symmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is symmetric, and i.s=v, then v.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:SymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asymmetric': SlotDefinition(name='asymmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['asymmetry is the combination of antisymmetry and irreflexivity'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:AsymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive': SlotDefinition(name='reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is reflexive, then i.s=i for all instances i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:ReflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'irreflexive': SlotDefinition(name='irreflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is irreflexive, then there exists no i such i.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:IrreflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'locally_reflexive': SlotDefinition(name='locally_reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is locally_reflexive, then i.s=i for all instances i where s is a class slot for the type of i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive': SlotDefinition(name='transitive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is transitive, and i.s=z, and s.s=j, then i.s=j', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:TransitiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive_form_of': SlotDefinition(name='transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Example: ancestor_of is the transitive_form_of parent_of'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive_transitive_form_of': SlotDefinition(name='reflexive_transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='transitive_form_of including the reflexive case', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='transitive_form_of', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inverse': SlotDefinition(name='inverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="indicates that any instance of d s r implies that there is also an instance of r s' d", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='owl:inverseOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_class_field': SlotDefinition(name='is_class_field', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that for any instance, i, the domain of this slot will include an assertion of i s range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'role': SlotDefinition(name='role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a textual descriptor that indicates the role played by the slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the primary use case for this slot is to provide a textual descriptor of a generic slot name when used in the context of a more specific class'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_value': SlotDefinition(name='minimum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or higher than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['low value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_value': SlotDefinition(name='maximum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or lower than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['high value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'interpolated': SlotDefinition(name='interpolated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then the pattern is first string interpolated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'partial_match': SlotDefinition(name='partial_match', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if not true then the pattern must match the whole string, as if enclosed in ^...$', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pattern': SlotDefinition(name='pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'syntax': SlotDefinition(name='syntax', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string. May be interpolated.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_pattern': SlotDefinition(name='structured_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to the regular expression in the pattern expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#structured-patterns'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pattern_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'string_serialization': SlotDefinition(name='string_serialization', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots.\nWe call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion.\nImplementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects\nFor example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/issues/128'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'type_mapping'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bindings': SlotDefinition(name='bindings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of enum bindings that specify how a slot can be bound to a permissible value from an enumeration.\nLinkML provides enums to allow string values to be restricted to one of a set of permissible values (specified statically or dynamically).\nEnum bindings allow enums to be bound to any object, including complex nested objects. For example, given a (generic) class Concept with slots id and label, it may be desirable to restrict the values the id takes on in a given context. For example, a HumanSample class may have a slot for representing sample site, with a range of concept, but the values of that slot may be restricted to concepts from a particular branch of an anatomy ontology.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_binding', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'binds_value_of': SlotDefinition(name='binds_value_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A path to a slot that is being bound to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_binding', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'obligation_level': SlotDefinition(name='obligation_level', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='obligation_level_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_mappings': SlotDefinition(name='type_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="A collection of type mappings that specify how a slot's range should be mapped or serialized in different frameworks", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_mapping', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'framework_key': SlotDefinition(name='framework_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of a format that can be used to serialize LinkML data. The string value should be a code from the LinkML frameworks vocabulary, but this is not strictly enforced', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='framework', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mapped_type': SlotDefinition(name='mapped_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='type to coerce to', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='type', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'typeof': SlotDefinition(name='typeof', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A parent type from which type properties are inherited', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the target type definition of the typeof slot is referred to as the "parent type"', 'the type definition containing the typeof slot is referred to as the "child type"', 'type definitions without a typeof slot are referred to as a "root type"'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'base': SlotDefinition(name='base', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='python base type in the LinkML runtime that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['every root type must have a base', 'the base is inherited by child types but may be overridden. Base compatibility is not checked.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_uri': SlotDefinition(name='type_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The uri that defines the possible values for the type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps)", 'every root type must have a type uri'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='uri', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'repr': SlotDefinition(name='repr', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name of the python object that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_text': SlotDefinition(name='alt_description_text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='text of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_source': SlotDefinition(name='alt_description_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the source of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='source', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_descriptions': SlotDefinition(name='alt_descriptions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A sourced alternative description for an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alternate definitions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alt_description', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value': SlotDefinition(name='value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri='skos:example', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_description': SlotDefinition(name='value_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='description of what the value is doing', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_object': SlotDefinition(name='value_object', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='direct object representation of the example', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='object', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'examples': SlotDefinition(name='examples', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example usages of an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['vann:example'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='example', domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='example', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_prefix': SlotDefinition(name='prefix_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix components of a prefix expansions. This is the part that appears before the colon in a CURIE.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:prefix', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_reference': SlotDefinition(name='prefix_reference', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The namespace to which a prefix expands to.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:namespace', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefixes': SlotDefinition(name='prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of prefix expansions that specify how CURIEs can be expanded to URIs', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='sh:declare', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='prefix', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_key': SlotDefinition(name='setting_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the variable name for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_value': SlotDefinition(name='setting_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The value assigned for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'settings': SlotDefinition(name='settings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of global variable settings', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['global variables are used in string interpolation in structured patterns'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['constants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_from': SlotDefinition(name='import_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_as': SlotDefinition(name='import_as', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_map': SlotDefinition(name='import_map', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_source': SlotDefinition(name='local_name_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the ncname of the source of the name', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_value': SlotDefinition(name='local_name_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name assigned to an element in a given ontology', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_names': SlotDefinition(name='local_names', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='local_name', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_group': SlotDefinition(name='slot_group', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='allows for grouping of related slots into a grouping slot that serves the role of a group', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['slot groups do not change the semantics of a model but are a useful way of visually grouping related slots'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='sh:group', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression='True', exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this slot is a grouping slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:PropertyGroup'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in a sequential list, this indicates the next member', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reversed': SlotDefinition(name='reversed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if the slot is to be inversed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse': SlotDefinition(name='traverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot to traverse', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'path_rule': SlotDefinition(name='path_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'represents_relationship': SlotDefinition(name='represents_relationship', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this class represents a relationship rather than an entity', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond', 'in the context of RDF, this should be used when instances of the class are `rdf:Statement`s', 'in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['rdf:Statement', 'https://patterns.dataincubator.org/book/qualified-relation.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['is_reified'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_role': SlotDefinition(name='relational_role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the role a slot on a relationship class plays, for example, the subject, object or predicate roles', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this should only be used on slots that are applicable to class that represent relationships', 'in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary', 'in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reification_role'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='relational_role_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'Anything': ClassDefinition(name='Anything', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri='linkml:Any', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'common_metadata': ClassDefinition(name='common_metadata', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Generic metadata shared across definitions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['description', 'alt_descriptions', 'title', 'deprecated', 'todos', 'notes', 'comments', 'examples', 'in_subset', 'from_schema', 'imported_from', 'source', 'in_language', 'see_also', 'deprecated element has exact replacement', 'deprecated element has possible replacement', 'aliases', 'structured_aliases', 'mappings', 'exact mappings', 'close mappings', 'related mappings', 'narrow mappings', 'broad mappings', 'created_by', 'contributors', 'created_on', 'last_updated_on', 'modified_by', 'status', 'rank', 'categories', 'keywords'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'element': ClassDefinition(name='element', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A named element in the model', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data element', 'object'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['name', 'id_prefixes', 'id_prefixes_are_closed', 'definition_uri', 'local_names', 'conforms_to', 'implements', 'instantiates'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'schema_definition': ClassDefinition(name='schema_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of definitions that make up a schema or a data model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_dictionary'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data dictionary', 'data model', 'information model', 'logical model', 'schema', 'model'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['qb:ComponentSet', 'owl:Ontology'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'version', 'imports', 'license', 'prefixes', 'emit_prefixes', 'default_curi_maps', 'default_prefix', 'default_range', 'subsets', 'types', 'enums', 'slot_definitions', 'classes', 'metamodel_version', 'source_file', 'source_file_date', 'source_file_size', 'generation_date', 'slot_names_unique', 'settings', 'bindings'], slot_usage={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a unique name for the schema that is both human-readable and consists of only characters from the NCName set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=True, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_expression': ClassDefinition(name='type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract class grouping named types and anonymous type expressions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'equals_string', 'equals_string_in', 'equals_number', 'minimum_value', 'maximum_value', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_type_expression': ClassDefinition(name='anonymous_type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A type expression that is not a top-level named type definition. Used for nesting.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_definition': ClassDefinition(name='type_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that whose instances are atomic scalar values that can be mapped to primitive types', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['typeof', 'base', 'type_uri', 'repr', 'union_of'], slot_usage={'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'subset_definition': ClassDefinition(name='subset_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that can be used to group other metamodel elements', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'definition': ClassDefinition(name='definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='abstract base class for core metaclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_definition'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='element', abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['is_a', 'abstract', 'mixin', 'mixins', 'apply_to', 'values_from', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_expression': ClassDefinition(name='enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that constrains the range of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['code_set', 'code_set_tag', 'code_set_version', 'pv_formula', 'permissible_values', 'include', 'minus', 'inherits', 'reachable_from', 'matches', 'concepts'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_enum_expression': ClassDefinition(name='anonymous_enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum_expression that is not named', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_definition': ClassDefinition(name='enum_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances must be drawn from a specified set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['enum', 'enumeration', 'semantic enumeration', 'value set', 'term set', 'concept set', 'code set', 'Terminology Value Set', 'answer list', 'value domain'], structured_aliases={}, mappings=[], exact_mappings=['qb:HierarchicalCodeList', 'NCIT:C113497', 'cdisc:ValueDomain'], close_mappings=['skos:ConceptScheme'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['enum_uri'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_binding': ClassDefinition(name='enum_binding', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binding of a slot or a class to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'obligation_level', 'binds_value_of', 'pv_formula'], slot_usage={'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'match_query': ClassDefinition(name='match_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissivle values via a query that matches on properties of the external concepts.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['identifier_pattern', 'source_ontology'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'reachability_query': ClassDefinition(name='reachability_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissible values via walking from a set of source nodes to a set of descendants or ancestors over a set of relationship types.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['source_ontology', 'source_nodes', 'relationship_types', 'is_direct', 'include_self', 'traverse_up'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'structured_alias': ClassDefinition(name='structured_alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='object that contains meta data about a synonym or alias including where it came from (source) and its scope (narrow, broad, etc.)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['literal_form', 'alias_predicate', 'categories', 'alias_contexts'], slot_usage={'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The category or categories of an alias. This can be drawn from any relevant vocabulary', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://w3id.org/mod#acronym', description='An acronym', object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='skosxl:Label', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'expression': ClassDefinition(name='expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='general mixin for any class that can represent some form of expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_expression': ClassDefinition(name='anonymous_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract parent class for any nested expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['anonymous expressions are useful for when it is necessary to build a complex expression without introducing a named element for each sub-expression'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'path_expression': ClassDefinition(name='path_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that describes an abstract path from an object to another through a sequence of slot lookups', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['followed_by', 'none_of', 'any_of', 'all_of', 'exactly_one_of', 'reversed', 'traverse', 'range_expression'], slot_usage={'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_expression': ClassDefinition(name='slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that constrains the range of values a slot can take', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'range_expression', 'enum_range', 'bindings', 'required', 'recommended', 'multivalued', 'inlined', 'inlined_as_list', 'minimum_value', 'maximum_value', 'pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'value_presence', 'equals_string', 'equals_string_in', 'equals_number', 'equals_expression', 'exact_cardinality', 'minimum_cardinality', 'maximum_cardinality', 'has_member', 'all_members', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_slot_expression': ClassDefinition(name='anonymous_slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_definition': ClassDefinition(name='slot_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that describes how instances are related to other instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['slot', 'field', 'property', 'attribute', 'column', 'variable'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdf:Property', 'qb:ComponentProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['singular_name', 'domain', 'slot_uri', 'array', 'inherited', 'readonly', 'ifabsent', 'list_elements_unique', 'list_elements_ordered', 'shared', 'key', 'identifier', 'designates_type', 'alias', 'owner', 'domain_of', 'subproperty_of', 'symmetric', 'reflexive', 'locally_reflexive', 'irreflexive', 'asymmetric', 'transitive', 'inverse', 'is_class_field', 'transitive_form_of', 'reflexive_transitive_form_of', 'role', 'is_usage_slot', 'usage_slot_name', 'relational_role', 'slot_group', 'is_grouping_slot', 'path_rule', 'disjoint_with', 'children_are_mutually_disjoint', 'union_of', 'type_mappings'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent slot from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin slots from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_expression': ClassDefinition(name='class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A boolean expression that can be used to dynamically determine membership of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['any_of', 'exactly_one_of', 'none_of', 'all_of', 'slot_conditions'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_class_expression': ClassDefinition(name='anonymous_class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['is_a'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_definition': ClassDefinition(name='class_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances are complex objects that may have slot-value assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['table', 'record', 'template', 'message', 'observation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:Class'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['slots', 'slot_usage', 'attributes', 'class_uri', 'subclass_of', 'union_of', 'defining_slots', 'tree_root', 'unique_keys', 'rules', 'classification_rules', 'slot_names_unique', 'represents_relationship', 'disjoint_with', 'children_are_mutually_disjoint'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin classes from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_level_rule': ClassDefinition(name='class_level_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that is applied to classes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_rule': ClassDefinition(name='class_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that applies to instances of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if rule'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:TripleRule', 'swrl:Imp'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='class_level_rule', abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['preconditions', 'postconditions', 'elseconditions', 'bidirectional', 'open_world', 'rank', 'deactivated'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'array_expression': ClassDefinition(name='array_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['exact_number_dimensions', 'minimum_number_dimensions', 'maximum_number_dimensions', 'dimensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'dimension_expression': ClassDefinition(name='dimension_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines one of the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['alias', 'maximum_cardinality', 'minimum_cardinality', 'exact_cardinality'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'pattern_expression': ClassDefinition(name='pattern_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a regular expression pattern used to evaluate conformance of a string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['syntax', 'interpolated', 'partial_match'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'import_expression': ClassDefinition(name='import_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression describing an import', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['import_from', 'import_as', 'import_map'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'setting': ClassDefinition(name='setting', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='assignment of a key to a value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['setting_key', 'setting_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'prefix': ClassDefinition(name='prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='prefix URI tuple', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['prefix_prefix', 'prefix_reference'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'local_name': ClassDefinition(name='local_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed label', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['local_name_source', 'local_name_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'example': ClassDefinition(name='example', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='usage example and description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['value', 'value_description', 'value_object'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'alt_description': ClassDefinition(name='alt_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['structured description'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['alt_description_source', 'alt_description_text'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'permissible_value': ClassDefinition(name='permissible_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a permissible value, accompanied by intended text and an optional mapping to a concept URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:Concept'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['text', 'description', 'meaning', 'unit', 'instantiates', 'implements', 'is_a', 'mixins'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'unique_key': ClassDefinition(name='unique_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of slots whose values uniquely identify an instance of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['unique_key_name', 'unique_key_slots', 'consider_nulls_inequal'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_mapping': ClassDefinition(name='type_mapping', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Represents how a slot or type can be serialized to a format.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['framework_key', 'mapped_type', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file=None, source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), schema_map={'meta': SchemaDefinition(name='meta', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The metamodel for schemas defined using the Linked Data Modeling Language framework.\n\nFor more information on LinkML:\n\n* [linkml.io](https://linkml.io) main website\n* [specification](https://w3id.org/linkml/docs/specification/)\n\nLinkML is self-describing. Every LinkML schema consists of elements\nthat instantiate classes in this metamodel.\n\nCore metaclasses:\n\n* [SchemaDefinition](https://w3id.org/linkml/SchemaDefinition)\n* [ClassDefinition](https://w3id.org/linkml/ClassDefinition)\n* [SlotDefinition](https://w3id.org/linkml/SlotDefinition)\n* [TypeDefinition](https://w3id.org/linkml/TypeDefinition)\n\nThere are many subsets of *profiles* of the metamodel, for different purposes:\n\n* [MinimalSubset](https://w3id.org/linkml/MinimalSubset)\n* [BasicSubset](https://w3id.org/linkml/BasicSubset)\n\nFor canonical reference documentation on any metamodel construct,\nrefer to the official URI for each construct, e.g.\n[https://w3id.org/linkml/is_a](https://w3id.org/linkml/is_a)', alt_descriptions={}, title='LinkML Schema Metamodel', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/meta', version=None, imports=['linkml:types', 'linkml:mappings', 'linkml:extensions', 'linkml:annotations', 'linkml:units'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'skosxl': Prefix(prefix_prefix='skosxl', prefix_reference='http://www.w3.org/2008/05/skos-xl#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'NCIT': Prefix(prefix_prefix='NCIT', prefix_reference='http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#'), 'pav': Prefix(prefix_prefix='pav', prefix_reference='http://purl.org/pav/'), 'oslc': Prefix(prefix_prefix='oslc', prefix_reference='http://open-services.net/ns/core#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/'), 'bibo': Prefix(prefix_prefix='bibo', prefix_reference='http://purl.org/ontology/bibo/'), 'swrl': Prefix(prefix_prefix='swrl', prefix_reference='http://www.w3.org/2003/11/swrl#'), 'sh': Prefix(prefix_prefix='sh', prefix_reference='http://www.w3.org/ns/shacl#'), 'owl': Prefix(prefix_prefix='owl', prefix_reference='http://www.w3.org/2002/07/owl#'), 'qb': Prefix(prefix_prefix='qb', prefix_reference='http://purl.org/linked-data/cube#'), 'prov': Prefix(prefix_prefix='prov', prefix_reference='http://www.w3.org/ns/prov#'), 'vann': Prefix(prefix_prefix='vann', prefix_reference='https://vocab.org/vann/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/'), 'cdisc': Prefix(prefix_prefix='cdisc', prefix_reference='http://rdf.cdisc.org/mms#'), 'SIO': Prefix(prefix_prefix='SIO', prefix_reference='http://semanticscience.org/resource/SIO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'dcterms', 'OIO', 'owl', 'pav'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={'MinimalSubset': SubsetDefinition(name='MinimalSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The absolute minimal set of elements necessary for defining any schema.\n\nschemas conforming to the minimal subset consist of classes, with all slots\ninlined as attributes. There are no enums.', alt_descriptions={}, title='minimal subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[]), 'BasicSubset': SubsetDefinition(name='BasicSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An extension of MinimalSubset that avoids advanced constructs and can be implemented by a broad variety of tools.\n\nThis subset roughly corresponds to the union of most standard constructs used in relational datamodel modeling,\nobject oriented modeling, and simple JSON-style modeling, while avoiding more advanced constructs from these languages.\n\nIt is often possible to translate from a more expressive schema to a BasicSubset schema, through a schema derivation\nprocess', alt_descriptions={}, title='basic subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[]), 'SpecificationSubset': SubsetDefinition(name='SpecificationSubset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A subset that includes all the metamodel elements that form part of the normative LinkML specification.\n\nThe complete LinkML specification can be found at [linkml:specification](https://w3id.org/linkml/specification)', alt_descriptions={}, title='specification subset', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[]), 'RelationalModelProfile': SubsetDefinition(name='RelationalModelProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using the classic Relational Model.\nThe Relational Model excludes collections (multivalued slots) as first class entities. Instead, these must be\nmapped to backreferences\n\nThe classic Relational Model excludes inheritance and polymorphism -- these must be rolled down to\nconcrete classes or otherwise transformed.', alt_descriptions={}, title='relational model profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[]), 'ObjectOrientedProfile': SubsetDefinition(name='ObjectOrientedProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed using a minimal\nimplementation of the object oriented metamodel as employed by languages such as Java and Python, or\nin modeling frameworks like UML', alt_descriptions={}, title='object oriented profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[]), 'OwlProfile': SubsetDefinition(name='OwlProfile', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A profile that includes all the metamodel elements whose semantics can be expressed in OWL', alt_descriptions={}, title='owl profile', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, types={}, enums={'pv_formula_options': EnumDefinition(name='pv_formula_options', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The formula used to generate the set of permissible values from the code_set values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'CODE': PermissibleValue(text='CODE', description='The permissible values are the set of possible codes in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'CURIE': PermissibleValue(text='CURIE', description='The permissible values are the set of CURIES in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'URI': PermissibleValue(text='URI', description='The permissible values are the set of code URIs in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'FHIR_CODING': PermissibleValue(text='FHIR_CODING', description='The permissible values are the set of FHIR coding elements derived from the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'LABEL': PermissibleValue(text='LABEL', description='The permissible values are the set of human readable labels in the code set', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'presence_enum': EnumDefinition(name='presence_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of conditions by which a slot value should be set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'UNCOMMITTED': PermissibleValue(text='UNCOMMITTED', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PRESENT': PermissibleValue(text='PRESENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'ABSENT': PermissibleValue(text='ABSENT', description=None, meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'relational_role_enum': EnumDefinition(name='relational_role_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='enumeration of roles a slot on a relationship class can play', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'SUBJECT': PermissibleValue(text='SUBJECT', description='a slot with this role connects a relationship to its subject/source node', meaning='rdf:subject', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedSource'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OBJECT': PermissibleValue(text='OBJECT', description='a slot with this role connects a relationship to its object/target node', meaning='rdf:object', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedTarget'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'PREDICATE': PermissibleValue(text='PREDICATE', description='a slot with this role connects a relationship to its predicate/property', meaning='rdf:predicate', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:annotatedProperty'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NODE': PermissibleValue(text='NODE', description='a slot with this role connects a symmetric relationship to a node that represents either subject or object node', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OTHER_ROLE': PermissibleValue(text='OTHER_ROLE', description='a slot with this role connects a relationship to a node that is not subject/object/predicate', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'alias_predicate_enum': EnumDefinition(name='alias_predicate_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='permissible values for the relationship between an element and an alias', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'EXACT_SYNONYM': PermissibleValue(text='EXACT_SYNONYM', description=None, meaning='skos:exactMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RELATED_SYNONYM': PermissibleValue(text='RELATED_SYNONYM', description=None, meaning='skos:relatedMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'BROAD_SYNONYM': PermissibleValue(text='BROAD_SYNONYM', description=None, meaning='skos:broaderMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'NARROW_SYNONYM': PermissibleValue(text='NARROW_SYNONYM', description=None, meaning='skos:narrowerMatch', unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[]), 'obligation_level_enum': EnumDefinition(name='obligation_level_enum', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, enum_uri=None, code_set=None, code_set_tag=None, code_set_version=None, pv_formula=None, permissible_values={'REQUIRED': PermissibleValue(text='REQUIRED', description='The metadata element is required to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'RECOMMENDED': PermissibleValue(text='RECOMMENDED', description='The metadata element is recommended to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ENCOURAGED'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'OPTIONAL': PermissibleValue(text='OPTIONAL', description='The metadata element is optional to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'EXAMPLE': PermissibleValue(text='EXAMPLE', description='The metadata element is an example of how to use the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[]), 'DISCOURAGED': PermissibleValue(text='DISCOURAGED', description='The metadata element is allowed but discouraged to be present in the model', meaning=None, unit=None, instantiates=[], implements=[], is_a=None, mixins=[], extensions={}, annotations={}, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[])}, include=[], minus=[], inherits=[], reachable_from=None, matches=None, concepts=[])}, slots={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_name', 'https://linkml.io/linkml/faq/modeling.html#why-are-my-class-names-translated-to-camelcase'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['short name', 'unique name'], structured_aliases={}, mappings=[], exact_mappings=['schema:name'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'title': SlotDefinition(name='title', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A concise human-readable display label for the element. The title should mirror the name, and should use ordinary textual punctuation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['long name'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:title', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'conforms_to': SlotDefinition(name='conforms_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An established standard to which the element conforms.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:implements'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:conformsTo', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implements': SlotDefinition(name='implements', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element conforms to. The referenced element is not imported into the schema for the implementing element. However, the referenced schema may be used to check conformance of the implementing element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'instantiates': SlotDefinition(name='instantiates', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An element in another schema which this element instantiates.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Controlled terms used to categorize an element.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if you wish to use uncontrolled terms or terms that lack identifiers then use the keywords element'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='category', domain=None, slot_uri='dcterms:subject', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'structured_alias'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'keywords': SlotDefinition(name='keywords', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Keywords or tags used to describe the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='keyword', domain='element', slot_uri='schema:keywords', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'definition_uri': SlotDefinition(name='definition_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The native URI of the element. This is always within the namespace of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Formed by combining the default_prefix with the normalized element name'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:class_uri', 'linkml:slot_uri'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='filled in by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes': SlotDefinition(name='id_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An allowed list of prefixes for which identifiers must conform. The identifier of this class or slot must begin with the URIs referenced by this prefix', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Order of elements may be used to indicate priority order', 'If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by `:` (_should_ start if the list is open)', 'If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix (_should_ start if the list is open)'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml-model/issues/28'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id_prefixes_are_closed': SlotDefinition(name='id_prefixes_are_closed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true, then the id_prefixes slot is treated as being closed, and any use of an id that does not have this prefix is considered a violation.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/194'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'description': SlotDefinition(name='description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="a textual description of the element's purpose and use", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['definition'], structured_aliases={}, mappings=[], exact_mappings=['dcterms:description', 'schema:description'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:definition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_aliases': SlotDefinition(name='structured_aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of structured_alias objects, used to provide aliases in conjunction with additional metadata.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:aliases'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skosxl:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='structured_alias', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'aliases': SlotDefinition(name='aliases', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Alternate names/labels for the element. These do not alter the semantics of the schema, but may be useful to support search and alignment.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['not be confused with the metaslot alias.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['synonyms', 'alternate names', 'alternative labels', 'designations'], structured_aliases={}, mappings=[], exact_mappings=['schema:alternateName'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated': SlotDefinition(name='deprecated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Description of why and when this element will no longer be used', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note that linkml does not use a boolean to indicate deprecation status - the presence of a string value in this field is sufficient to indicate deprecation.'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:deprecated'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'todos': SlotDefinition(name='todos', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Outstanding issues that needs resolution', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'notes': SlotDefinition(name='notes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='editorial notes about an element intended primarily for internal consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:editorialNote', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'comments': SlotDefinition(name='comments', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='notes and comments about an element intended primarily for external consumption', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['rdfs:comment'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:note', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_subset': SlotDefinition(name='in_subset', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='used to indicate membership of a term in a defined subset of terms used for a particular domain or application.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of use in the translator_minimal subset in the biolink model, holding the minimal set of predicates used in a translator knowledge graph'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='OIO:inSubset', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'from_schema': SlotDefinition(name='from_schema', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='id of the schema that defined the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["A stronger model would be range schema_definition, but this doesn't address the import model"], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='skos:inScheme', array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imported_from': SlotDefinition(name='imported_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the imports entry that this element was derived from. Empty means primary source', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'see_also': SlotDefinition(name='see_also', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of related entities or URLs that may be of relevance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='rdfs:seeAlso', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owned_by': SlotDefinition(name='owned_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that owns or is the steward of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['steward', 'owner'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:isDefinedBy'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_by': SlotDefinition(name='created_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that created the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'contributors': SlotDefinition(name='contributors', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that contributed to the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:contributor', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'created_on': SlotDefinition(name='created_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was created', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:createdOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'last_updated_on': SlotDefinition(name='last_updated_on', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='time at which the element was last updated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='pav:lastUpdatedOn', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'modified_by': SlotDefinition(name='modified_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='agent that modified the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='oslc:modifiedBy', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'status': SlotDefinition(name='status', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='status of the element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='bibo:draft', description=None, object=None)], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://www.hl7.org/fhir/valueset-publication-status.html', 'https://www.hl7.org/fhir/versions.html#std-process'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['workflow status'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='bibo:status', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'literal_form': SlotDefinition(name='literal_form', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The literal lexical form of a structured alias; i.e the actual alias value.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alias_name', 'string_value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='skosxl:literalForm', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_predicate': SlotDefinition(name='alias_predicate', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The relationship between an element and its alias.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri='rdf:predicate', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='predicate', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alias_predicate_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias_contexts': SlotDefinition(name='alias_contexts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The context in which an alias should be applied', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='structured_alias', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='contexts', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'in_language': SlotDefinition(name='in_language', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.rfc-editor.org/rfc/bcp/bcp47.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='the primary language used in the sources', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Recommended to use a string from IETF BCP 47'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='schema:inLanguage', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source': SlotDefinition(name='source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A related resource from which the element is derived.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The described resource may be derived from the related resource in whole or in part'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['origin', 'derived from'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['prov:wasDerivedFrom', 'schema:isBasedOn'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:source', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'publisher': SlotDefinition(name='publisher', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An entity responsible for making the resource available', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri='dcterms:publisher', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class or slot from which inheritable metaslots are propagated from. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abstract': SlotDefinition(name='abstract', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot cannot be directly instantiated and is intended for grouping purposes.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixin': SlotDefinition(name='mixin', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates the class or slot is intended to be inherited from without being an is_a parent. mixins should not be inherited from using is_a, except by other mixins.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['trait'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent classes or slots from which inheritable metaslots are propagated from.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierarchy, while keeping the benefits of multiple inheritance'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Mixin'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['traits'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class.", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'values_from': SlotDefinition(name='values_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The identifier of a "value set" -- a set of identifiers that form the possible values for the range of a slot. Note: this is different than \'subproperty_of\' in that \'subproperty_of\' is intended to be a single ontology term while \'values_from\' is the identifier of an entire value set. Additionally, this is different than an enumeration in that in an enumeration, the values of the enumeration are listed directly in the model itself. Setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set': SlotDefinition(name='code_set', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the identifier of an enumeration code set.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_version': SlotDefinition(name='code_set_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version identifier of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['we assume that version identifiers lexically sort in temporal order. Recommend semver when possible'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'code_set_tag': SlotDefinition(name='code_set_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the version tag of the enumeration code set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['enum_expression cannot have both a code_set_tag and a code_set_version'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pv_formula': SlotDefinition(name='pv_formula', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Defines the specific formula to be used to generate the permissible values.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['you cannot have BOTH the permissible_values and permissible_value_formula tag', 'code_set must be supplied for this to be valid'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pv_formula_options', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'permissible_values': SlotDefinition(name='permissible_values', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of possible values for a slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['coded values'], structured_aliases={}, mappings=[], exact_mappings=['cdisc:PermissibleValue'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_uri': SlotDefinition(name='enum_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the enum that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include': SlotDefinition(name='include', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be included, after subtracting the minus set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minus': SlotDefinition(name='minus', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum expression that yields a list of permissible values that are to be subtracted from the enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherits': SlotDefinition(name='inherits', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum definition that is used as the basis to create a new enum', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['All permissible values for all inherited enums are copied to form the initial seed set'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'matches': SlotDefinition(name='matches', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a match query that is used to calculate the list of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='match_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier_pattern': SlotDefinition(name='identifier_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A regular expression that is used to obtain a set of identifiers from a source_ontology to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='match_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'concepts': SlotDefinition(name='concepts', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of identifiers that are used to construct a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reachable_from': SlotDefinition(name='reachable_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Specifies a query for obtaining a list of permissible values based on graph reachability', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='reachability_query', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_ontology': SlotDefinition(name='source_ontology', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An ontology or vocabulary or terminology that is used in a query to obtain a set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['examples include schema.org, wikidata, or an OBO ontology', 'for obo ontologies we recommend CURIEs of the form obo:cl, obo:envo, etc'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['terminology', 'vocabulary'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_direct': SlotDefinition(name='is_direct', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the reachability query should only include directly related nodes, if False then include also transitively connected', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['non-transitive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse_up': SlotDefinition(name='traverse_up', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the direction of the reachability query is reversed and ancestors are retrieved', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['ancestors'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'include_self': SlotDefinition(name='include_self', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True if the query is reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reflexive'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relationship_types': SlotDefinition(name='relationship_types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of relationship types (properties) that are used in a reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['predicates', 'properties'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_nodes': SlotDefinition(name='source_nodes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of nodes that are used in the reachability query', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='reachability_query', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'text': SlotDefinition(name='text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The actual permissible value itself', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['there are no constraints on the text of the permissible value, but for many applications you may want to consider following idiomatic forms and using computer-friendly forms'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:notation'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=True, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'meaning': SlotDefinition(name='meaning', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value meaning of a permissible value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['we may want to change the range of this (and other) elements in the model to an entitydescription type construct'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/ISO/IEC_11179'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV meaning'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='permissible_value', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'id': SlotDefinition(name='id', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The official schema URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=0, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'emit_prefixes': SlotDefinition(name='emit_prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'version': SlotDefinition(name='version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='particular version of schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:schemaVersion'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='pav:version', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'imports': SlotDefinition(name='imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of schemas that are to be included in this schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_imports': SlotDefinition(name='structured_imports', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of specifications for how to import elements from external schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='import_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'license': SlotDefinition(name='license', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='license for the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='dcterms:license', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_curi_maps': SlotDefinition(name='default_curi_maps', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_prefix': SlotDefinition(name='default_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix that is used for all elements within a schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=11, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='default_ns', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'default_range': SlotDefinition(name='default_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='default slot range to be used if range element is omitted from a slot definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=13, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subsets': SlotDefinition(name='subsets', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all subset definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['OIO:hasSubset'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='subset_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'types': SlotDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all type definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enums': SlotDefinition(name='enums', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all enum definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_definitions': SlotDefinition(name='slot_definitions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all slot definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['note the formal name of this element is slot_definitions, but it has alias slots, which is the canonical form used in yaml/json serializes of schemas.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='slots', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classes': SlotDefinition(name='classes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An index to the collection of all class definitions in the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'metamodel_version': SlotDefinition(name='metamodel_version', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Version of the metamodel used to load the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file': SlotDefinition(name='source_file', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name, uri or description of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_date': SlotDefinition(name='source_file_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='modification date of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'source_file_size': SlotDefinition(name='source_file_size', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='size in bytes of the source of the schema', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'generation_date': SlotDefinition(name='generation_date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='date and time that the schema was loaded/generated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly='supplied by the schema loader or schema view', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='datetime', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slots': SlotDefinition(name='slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='collection of slot names that are applicable to a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the list of applicable slots is inherited from parent classes', 'This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=19, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_usage': SlotDefinition(name='slot_usage', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the refinement of a slot in the context of the containing class definition.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=23, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'enum_range': SlotDefinition(name='enum_range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An inlined enumeration', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range_expression': SlotDefinition(name='range_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A range that is described as a boolean expression combining existing ranges', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['one use for this is being able to describe a range using any_of expressions, for example to combine two enums'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['path_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean_slot': SlotDefinition(name='boolean_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A grouping of slots that expression a boolean operator over a list of operands', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if at least one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:or'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=101, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if only one of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:xone'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=103, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if none of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:not'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=105, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='holds if all of the expressions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['sh:and'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=107, categories=[], keywords=[], is_a='boolean_slot', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'preconditions': SlotDefinition(name='preconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold in order for the rule to be applicable to an instance', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if', 'body', 'antecedents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=111, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:condition', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'postconditions': SlotDefinition(name='postconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['then', 'head', 'consequents'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['swrl:body'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=113, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'elseconditions': SlotDefinition(name='elseconditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that must hold for an instance of the class, if the preconditions no not hold', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/05validation/#rules'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['else'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=115, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bidirectional': SlotDefinition(name='bidirectional', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in addition to preconditions entailing postconditions, the postconditions entail the preconditions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['iff', 'if and only if'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'open_world': SlotDefinition(name='open_world', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rank': SlotDefinition(name='rank', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the relative order in which the element occurs, lower values are given precedence', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the rank of an element does not affect the semantics'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['order', 'precedence', 'display order'], structured_aliases={}, mappings=[], exact_mappings=['qudt:order', 'qb:order'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=51, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:order', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata', 'class_rule'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deactivated': SlotDefinition(name='deactivated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a deactivated rule is not executed by the rules engine', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='sh:deactivated', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the collection of rules that apply to all members of this class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri='sh:rule', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'classification_rules': SlotDefinition(name='classification_rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The collection of classification rules that apply to all members of this class. Classification rules allow for automatically assigning the instantiated type of an instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_conditions': SlotDefinition(name='slot_conditions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='expresses constraints on a group of slots for a class expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'attributes': SlotDefinition(name='attributes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Inline definition of slots', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=29, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'class_uri': SlotDefinition(name='class_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the element in a linked data context. The URI may come from any namespace and may be shared between schemas', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning class_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='class_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subclass_of': SlotDefinition(name='subclass_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='DEPRECATED -- rdfs:subClassOf to be emitted in OWL generation', alt_descriptions={}, title=None, deprecated='Use is_a instead', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdfs:subClassOf'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'defining_slots': SlotDefinition(name='defining_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that the domain element consists exactly of the members of the element in the range.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['this only applies in the OWL generation'], comments=[], examples=[], in_subset=['SpecificationSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'tree_root': SlotDefinition(name='tree_root', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Indicates that this is the Container class which forms the root of the serialized document structure in tree serializations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['each schema should have at most one tree root'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/intro/tutorial02.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=31, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_keys': SlotDefinition(name='unique_keys', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of named unique keys for this class. Unique keys may be singular or compound.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#unique-key'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['owl:hasKey'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='unique_key', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_name': SlotDefinition(name='unique_key_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unique key', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'consider_nulls_inequal': SlotDefinition(name='consider_nulls_inequal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='By default, None values are considered equal for the purposes of comparisons in determining uniqueness. Set this to true to treat missing values as per ANSI-SQL NULLs, i.e NULL=NULL is always False.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'unique_key_slots': SlotDefinition(name='unique_key_slots', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='list of slot names that form a key. The tuple formed from the values of all these slots should be unique.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='unique_key', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_names_unique': SlotDefinition(name='slot_names_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then induced/mangled slot names are not created for class_usage and attributes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain': SlotDefinition(name='domain', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the subject of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts that X is an instance of C1\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the type of the object of the slot. Given the following slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n X:\n S1: Y\n\nimplicitly asserts Y is an instance of C2\n', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['range is underspecified, as not all elements can appear as the range of a slot.'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['value domain'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent='default_range', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['enum_binding', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='element', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_uri': SlotDefinition(name='slot_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='URI of the class that provides a semantic interpretation of the slot in a linked data context. The URI may come from any namespace and may be shared between schemas.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Assigning slot_uris can provide additional hooks for interoperation, indicating a common conceptual model'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:definition_uri', 'https://linkml.io/linkml/schemas/uris-and-mappings.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['public ID'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent='slot_curie', list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'multivalued': SlotDefinition(name='multivalued', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that slot can have more than one value and should be represented using a list or collection structure.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'array': SlotDefinition(name='array', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='coerces the value of the slot into an array and defines the dimensions of that array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='array_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'dimensions': SlotDefinition(name='dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='definitions of each axis in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['axes'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=True, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='dimension_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_number_dimensions': SlotDefinition(name='minimum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='minimum number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_number_dimensions': SlotDefinition(name='maximum_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='maximum number of dimensions in the array, or False if explicitly no maximum. If this is unset, and an explicit list of dimensions are passed using dimensions, then this is interpreted as a closed list and the maximum_number_dimensions is the length of the dimensions list, unless this value is set to False', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_number_dimensions cannot be less than minimum_number_dimensions'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), AnonymousSlotExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])], all_of=[]), 'exact_number_dimensions': SlotDefinition(name='exact_number_dimensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='exact number of dimensions in the array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_number_dimensions is set, then minimum_number_dimensions and maximum_number_dimensions must be unset or have the same value'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='array_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inherited': SlotDefinition(name='inherited', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the *value* of a slot is inherited by subclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only', 'Inherited applies to slot values. Parent *slots* are always inherited by subclasses'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'readonly': SlotDefinition(name='readonly', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If present, slot is read only. Text explains why', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the slot is to be used for defining *metamodels* only'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ifabsent': SlotDefinition(name='ifabsent', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='function that provides a default value for the slot.\n * [Tt]rue -- boolean True\n * [Ff]alse -- boolean False\n * bnode -- blank node identifier\n * class_curie -- CURIE for the containing class\n * class_uri -- URI for the containing class\n * default_ns -- schema default namespace\n * default_range -- schema default range\n * int(value) -- integer value\n * slot_uri -- URI for the slot\n * slot_curie -- CURIE for the slot\n * string(value) -- string value\n * EnumName(PermissibleValue) -- enum value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:equals_expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:defaultValue'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'implicit_prefix': SlotDefinition(name='implicit_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Causes the slot value to be interpreted as a uriorcurie after prefixing with this string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_specification_constant': SlotDefinition(name='value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain the a slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_value_specification_constant': SlotDefinition(name='list_value_specification_constant', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_presence': SlotDefinition(name='value_presence', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if PRESENT then a value must be present (for lists there must be at least one value). If ABSENT then a value must be absent (for lists, must be empty)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='presence_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string': SlotDefinition(name='equals_string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number': SlotDefinition(name='equals_number', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range of a number and the value of the slot must equal the specified value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='unstable', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_expression': SlotDefinition(name='equals_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot must equal the value of the evaluated expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["for example, a 'length' slot may have an equals_expression with value '(end-start)+1'"], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/developers/inference.html', 'https://linkml.io/linkml/schemas/advanced.html#equals-expression'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact_cardinality': SlotDefinition(name='exact_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the exact number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['if exact_cardinality is set, then minimum_cardinalty and maximum_cardinality must be unset or have the same value'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_cardinality': SlotDefinition(name='minimum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the minimum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['minimum_cardinality cannot be greater than maximum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_cardinality': SlotDefinition(name='maximum_cardinality', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the maximum number of entries for a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['maximum_cardinality cannot be less than minimum_cardinality'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_string_in': SlotDefinition(name='equals_string_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range string and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'equals_number_in': SlotDefinition(name='equals_number_in', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot must have range number and the value of the slot must equal one of the specified values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='integer', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_member': SlotDefinition(name='has_member', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with at least one member satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_members': SlotDefinition(name='all_members', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the value of the slot is multivalued with all members satisfying the condition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a='list_value_specification_constant', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'singular_name': SlotDefinition(name='singular_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name that is used in the singular form', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this may be used in some schema translations where use of a singular form is idiomatic, for example RDF'], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:altLabel'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'required': SlotDefinition(name='required', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot must be present in instances of the class definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'recommended': SlotDefinition(name='recommended', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that the slot should be present in instances of the class definition, but this is not required', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['This is to be used where not all data is expected to conform to having a required field', 'If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/linkml/issues/177'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=9, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inapplicable': SlotDefinition(name='inapplicable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true means that values for this slot must not be present', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['By default all slots are applicable. The main use case for this slot is as an override in a subclass'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined': SlotDefinition(name='inlined', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['classes without keys or identifiers are necessarily inlined as lists', 'only applicable in tree-like serializations, e.g json, yaml'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=25, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_list': SlotDefinition(name='inlined_as_list', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['The default loader will accept either list or dictionary form as input. This parameter controls internal\nrepresentation and output.', 'A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key\nis the key or identifier and whose value is the one additional element. This form is still stored according\nto the inlined_as_list setting.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms', 'https://linkml.io/linkml/schemas/inlining.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=27, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inlined_as_simple_dict': SlotDefinition(name='inlined_as_simple_dict', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that an inlined slot is represented as a simple dict whose values are all atoms', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://w3id.org/linkml/docs/specification/06mapping/#collection-forms'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=28, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_ordered': SlotDefinition(name='list_elements_ordered', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the order of elements of a multivalued slot is guaranteed to be preserved. If False, the order may still be preserved but this is not guaranteed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'list_elements_unique': SlotDefinition(name='list_elements_unique', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then there must be no duplicates in the elements of a multivalued slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['should only be used with multivalued slots'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'shared': SlotDefinition(name='shared', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If True, then the relationship between the slot domain and range is many to one or many to many', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['inverse functional', 'many to one or many'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'key': SlotDefinition(name='key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identify the elements within a single container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['key is inherited', 'a given domain can have at most one key slot (restriction to be removed in the future)', 'identifiers and keys are mutually exclusive. A given domain cannot have both', 'a key slot is automatically required. Keys cannot be optional'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'identifier': SlotDefinition(name='identifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) uniquely identifies the elements. There can be at most one identifier or key per container', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['identifier is inherited', 'a key slot is automatically required. Identifiers cannot be optional', 'a given domain can have at most one identifier', 'identifiers and keys are mutually exclusive. A given domain cannot have both'], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Identifier', 'linkml:unique_keys'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['primary key', 'ID', 'UID', 'code'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'designates_type': SlotDefinition(name='designates_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/type-designators.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['type designator'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alias': SlotDefinition(name='alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['an example of alias is used within this metamodel, slot_definitions is aliases as slots', 'not to be confused with aliases, which indicates a set of terms to be used for search purposes.'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='skos:prefLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'dimension_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'owner': SlotDefinition(name='owner', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the "owner" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot', alt_descriptions={}, title=None, deprecated='Will be replaced by domain_of and eventually removed', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by loader -- either class domain or slot domain', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'domain_of': SlotDefinition(name='domain_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the class(es) that reference the slot in a "slots" or "slot_usage" context', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:domainIncludes', 'SIO:000011'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_usage_slot': SlotDefinition(name='is_usage_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='True means that this slot was defined in a slot_usage situation', alt_descriptions={}, title=None, deprecated='Replaced by usage_slot_name', todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'usage_slot_name': SlotDefinition(name='usage_slot_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of the slot referenced in the slot_usage', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly='filled in by the loader', ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'subproperty_of': SlotDefinition(name='subproperty_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Ontology property which this slot is a subproperty of. Note: setting this property on a slot does not guarantee an expansion of the ontological hierarchy into an enumerated list of possible values in every serialization of the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='RO:HOM0000001', description='this is the RO term for "in homology relationship with", and used as a value of subproperty of this means that any ontological child (related to RO:HOM0000001 via an is_a relationship), is a valid value for the slot that declares this with the subproperty_of tag. This differs from the \'values_from\' meta model component in that \'values_from\' requires the id of a value set (said another way, if an entire ontology had a curie/identifier that was the identifier for the entire ontology, then that identifier would be used in \'values_from.\')', object=None)], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='rdfs:subPropertyOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'children_are_mutually_disjoint': SlotDefinition(name='children_are_mutually_disjoint', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If true then all direct is_a children are mutually disjoint and share no instances in common', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_logical_characteristic': SlotDefinition(name='relational_logical_characteristic', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract grouping for metaslots that describe logical properties of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symmetric': SlotDefinition(name='symmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is symmetric, and i.s=v, then v.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:SymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'asymmetric': SlotDefinition(name='asymmetric', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['asymmetry is the combination of antisymmetry and irreflexivity'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:AsymmetricProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive': SlotDefinition(name='reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is reflexive, then i.s=i for all instances i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:ReflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'irreflexive': SlotDefinition(name='irreflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is irreflexive, then there exists no i such i.s=i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:IrreflexiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'locally_reflexive': SlotDefinition(name='locally_reflexive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is locally_reflexive, then i.s=i for all instances i where s is a class slot for the type of i', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive': SlotDefinition(name='transitive', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s is transitive, and i.s=z, and s.s=j, then i.s=j', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:TransitiveProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='relational_logical_characteristic', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'transitive_form_of': SlotDefinition(name='transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Example: ancestor_of is the transitive_form_of parent_of'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reflexive_transitive_form_of': SlotDefinition(name='reflexive_transitive_form_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='transitive_form_of including the reflexive case', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='transitive_form_of', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'inverse': SlotDefinition(name='inverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="indicates that any instance of d s r implies that there is also an instance of r s' d", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='owl:inverseOf', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_class_field': SlotDefinition(name='is_class_field', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='indicates that for any instance, i, the domain of this slot will include an assertion of i s range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'role': SlotDefinition(name='role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a textual descriptor that indicates the role played by the slot range', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the primary use case for this slot is to provide a textual descriptor of a generic slot name when used in the context of a more specific class'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'minimum_value': SlotDefinition(name='minimum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or higher than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['low value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'maximum_value': SlotDefinition(name='maximum_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='For ordinal ranges, the value must be equal to or lower than this', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142'], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['high value'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'interpolated': SlotDefinition(name='interpolated', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if true then the pattern is first string interpolated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'partial_match': SlotDefinition(name='partial_match', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='if not true then the pattern must match the whole string, as if enclosed in ^...$', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'pattern': SlotDefinition(name='pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=35, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'syntax': SlotDefinition(name='syntax', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to this regular expression expressed in the string. May be interpolated.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='pattern_expression', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'structured_pattern': SlotDefinition(name='structured_pattern', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the string value of the slot must conform to the regular expression in the pattern expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://linkml.io/linkml/schemas/constraints.html#structured-patterns'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='pattern_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'string_serialization': SlotDefinition(name='string_serialization', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots.\nWe call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion.\nImplementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects\nFor example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://github.com/linkml/issues/128'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='definition', slot_uri=None, array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'type_mapping'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'bindings': SlotDefinition(name='bindings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of enum bindings that specify how a slot can be bound to a permissible value from an enumeration.\nLinkML provides enums to allow string values to be restricted to one of a set of permissible values (specified statically or dynamically).\nEnum bindings allow enums to be bound to any object, including complex nested objects. For example, given a (generic) class Concept with slots id and label, it may be desirable to restrict the values the id takes on in a given context. For example, a HumanSample class may have a slot for representing sample site, with a range of concept, but the values of that slot may be restricted to concepts from a particular branch of an anatomy ontology.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition', 'slot_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_binding', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'binds_value_of': SlotDefinition(name='binds_value_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A path to a slot that is being bound to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='enum_binding', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'obligation_level': SlotDefinition(name='obligation_level', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The level of obligation or recommendation strength for a metadata element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='obligation_level_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_mappings': SlotDefinition(name='type_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description="A collection of type mappings that specify how a slot's range should be mapped or serialized in different frameworks", alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_mapping', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'framework_key': SlotDefinition(name='framework_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The name of a format that can be used to serialize LinkML data. The string value should be a code from the LinkML frameworks vocabulary, but this is not strictly enforced', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='framework', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mapped_type': SlotDefinition(name='mapped_type', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='type to coerce to', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='type', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'typeof': SlotDefinition(name='typeof', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A parent type from which type properties are inherited', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['the target type definition of the typeof slot is referred to as the "parent type"', 'the type definition containing the typeof slot is referred to as the "child type"', 'type definitions without a typeof slot are referred to as a "root type"'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=7, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'base': SlotDefinition(name='base', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='python base type in the LinkML runtime that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['every root type must have a base', 'the base is inherited by child types but may be overridden. Base compatibility is not checked.'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=8, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'type_uri': SlotDefinition(name='type_uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The uri that defines the possible values for the type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=["uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps)", 'every root type must have a type uri'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='uri', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'repr': SlotDefinition(name='repr', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the name of the python object that implements this type definition', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='type_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_text': SlotDefinition(name='alt_description_text', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='text of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_description_source': SlotDefinition(name='alt_description_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the source of an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='alt_description', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='source', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'alt_descriptions': SlotDefinition(name='alt_descriptions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A sourced alternative description for an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['alternate definitions'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='alt_description', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value': SlotDefinition(name='value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri='skos:example', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_description': SlotDefinition(name='value_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='description of what the value is doing', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='description', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'value_object': SlotDefinition(name='value_object', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='direct object representation of the example', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='example', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='object', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='Anything', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'examples': SlotDefinition(name='examples', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='example usages of an element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['vann:example'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name='example', domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='example', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_prefix': SlotDefinition(name='prefix_prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The prefix components of a prefix expansions. This is the part that appears before the colon in a CURIE.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:prefix', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefix_reference': SlotDefinition(name='prefix_reference', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The namespace to which a prefix expands to.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='prefix', slot_uri='sh:namespace', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uri', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'prefixes': SlotDefinition(name='prefixes', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of prefix expansions that specify how CURIEs can be expanded to URIs', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=10, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri='sh:declare', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['schema_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='prefix', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_key': SlotDefinition(name='setting_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the variable name for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'setting_value': SlotDefinition(name='setting_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The value assigned for a setting', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='setting', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'settings': SlotDefinition(name='settings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of global variable settings', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['global variables are used in string interpolation in structured patterns'], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['constants'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='schema_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_from': SlotDefinition(name='import_from', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_as': SlotDefinition(name='import_as', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'import_map': SlotDefinition(name='import_map', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='import_expression', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='setting', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_source': SlotDefinition(name='local_name_source', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the ncname of the source of the name', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_name_value': SlotDefinition(name='local_name_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a name assigned to an element in a given ontology', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='local_name', slot_uri='skos:altLabel', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'local_names': SlotDefinition(name='local_names', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='element', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='local_name', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'slot_group': SlotDefinition(name='slot_group', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='allows for grouping of related slots into a grouping slot that serves the role of a group', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['slot groups do not change the semantics of a model but are a useful way of visually grouping related slots'], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri='sh:group', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression='True', exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'is_grouping_slot': SlotDefinition(name='is_grouping_slot', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this slot is a grouping slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:PropertyGroup'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='in a sequential list, this indicates the next member', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'reversed': SlotDefinition(name='reversed', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if the slot is to be inversed', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'traverse': SlotDefinition(name='traverse', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the slot to traverse', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'path_rule': SlotDefinition(name='path_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'represents_relationship': SlotDefinition(name='represents_relationship', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='true if this class represents a relationship rather than an entity', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond', 'in the context of RDF, this should be used when instances of the class are `rdf:Statement`s', 'in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['rdf:Statement', 'https://patterns.dataincubator.org/book/qualified-relation.html'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['is_reified'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='class_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='boolean', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'relational_role': SlotDefinition(name='relational_role', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the role a slot on a relationship class plays, for example, the subject, object or predicate roles', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['this should only be used on slots that are applicable to class that represent relationships', 'in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary', 'in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['reification_role'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='slot_definition', slot_uri=None, array=None, inherited=True, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='relational_role_enum', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'Anything': ClassDefinition(name='Anything', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri='linkml:Any', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'common_metadata': ClassDefinition(name='common_metadata', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Generic metadata shared across definitions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['description', 'alt_descriptions', 'title', 'deprecated', 'todos', 'notes', 'comments', 'examples', 'in_subset', 'from_schema', 'imported_from', 'source', 'in_language', 'see_also', 'deprecated element has exact replacement', 'deprecated element has possible replacement', 'aliases', 'structured_aliases', 'mappings', 'exact mappings', 'close mappings', 'related mappings', 'narrow mappings', 'broad mappings', 'created_by', 'contributors', 'created_on', 'last_updated_on', 'modified_by', 'status', 'rank', 'categories', 'keywords'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'element': ClassDefinition(name='element', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A named element in the model', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data element', 'object'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['name', 'id_prefixes', 'id_prefixes_are_closed', 'definition_uri', 'local_names', 'conforms_to', 'implements', 'instantiates'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'schema_definition': ClassDefinition(name='schema_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of definitions that make up a schema or a data model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_dictionary'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['data dictionary', 'data model', 'information model', 'logical model', 'schema', 'model'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['qb:ComponentSet', 'owl:Ontology'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=1, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['id', 'version', 'imports', 'license', 'prefixes', 'emit_prefixes', 'default_curi_maps', 'default_prefix', 'default_range', 'subsets', 'types', 'enums', 'slot_definitions', 'classes', 'metamodel_version', 'source_file', 'source_file_date', 'source_file_size', 'generation_date', 'slot_names_unique', 'settings', 'bindings'], slot_usage={'name': SlotDefinition(name='name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a unique name for the schema that is both human-readable and consists of only characters from the NCName set', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['element'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='ncname', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=True, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_expression': ClassDefinition(name='type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract class grouping named types and anonymous type expressions', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'equals_string', 'equals_string_in', 'equals_number', 'minimum_value', 'maximum_value', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_type_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_type_expression': ClassDefinition(name='anonymous_type_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A type expression that is not a top-level named type definition. Used for nesting.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_definition': ClassDefinition(name='type_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that whose instances are atomic scalar values that can be mapped to primitive types', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=4, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=['type_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['typeof', 'base', 'type_uri', 'repr', 'union_of'], slot_usage={'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='type_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'subset_definition': ClassDefinition(name='subset_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that can be used to group other metamodel elements', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=6, categories=[], keywords=[], is_a='element', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'definition': ClassDefinition(name='definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='abstract base class for core metaclasses', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=['https://en.wikipedia.org/wiki/Data_element_definition'], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='element', abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['is_a', 'abstract', 'mixin', 'mixins', 'apply_to', 'values_from', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_expression': ClassDefinition(name='enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that constrains the range of a slot', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['code_set', 'code_set_tag', 'code_set_version', 'pv_formula', 'permissible_values', 'include', 'minus', 'inherits', 'reachable_from', 'matches', 'concepts'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_enum_expression': ClassDefinition(name='anonymous_enum_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An enum_expression that is not named', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_definition': ClassDefinition(name='enum_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances must be drawn from a specified set of permissible values', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['enum', 'enumeration', 'semantic enumeration', 'value set', 'term set', 'concept set', 'code set', 'Terminology Value Set', 'answer list', 'value domain'], structured_aliases={}, mappings=[], exact_mappings=['qb:HierarchicalCodeList', 'NCIT:C113497', 'cdisc:ValueDomain'], close_mappings=['skos:ConceptScheme'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=5, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['enum_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['enum_uri'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'enum_binding': ClassDefinition(name='enum_binding', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binding of a slot or a class to a permissible value from an enumeration.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'obligation_level', 'binds_value_of', 'pv_formula'], slot_usage={'range': SlotDefinition(name='range', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='enum_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'match_query': ClassDefinition(name='match_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissivle values via a query that matches on properties of the external concepts.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['identifier_pattern', 'source_ontology'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'reachability_query': ClassDefinition(name='reachability_query', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A query that is used on an enum expression to dynamically obtain a set of permissible values via walking from a set of source nodes to a set of descendants or ancestors over a set of relationship types.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['source_ontology', 'source_nodes', 'relationship_types', 'is_direct', 'include_self', 'traverse_up'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'structured_alias': ClassDefinition(name='structured_alias', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='object that contains meta data about a synonym or alias including where it came from (source) and its scope (narrow, broad, etc.)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['literal_form', 'alias_predicate', 'categories', 'alias_contexts'], slot_usage={'categories': SlotDefinition(name='categories', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The category or categories of an alias. This can be drawn from any relevant vocabulary', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[Example(value='https://w3id.org/mod#acronym', description='An acronym', object=None)], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='skosxl:Label', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'expression': ClassDefinition(name='expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='general mixin for any class that can represent some form of expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_expression': ClassDefinition(name='anonymous_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abstract parent class for any nested expression', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['anonymous expressions are useful for when it is necessary to build a complex expression without introducing a named element for each sub-expression'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'path_expression': ClassDefinition(name='path_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An expression that describes an abstract path from an object to another through a sequence of slot lookups', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['expression', 'extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['followed_by', 'none_of', 'any_of', 'all_of', 'exactly_one_of', 'reversed', 'traverse', 'range_expression'], slot_usage={'followed_by': SlotDefinition(name='followed_by', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='path_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_expression': ClassDefinition(name='slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression that constrains the range of values a slot can take', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='expression', abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['range', 'range_expression', 'enum_range', 'bindings', 'required', 'recommended', 'multivalued', 'inlined', 'inlined_as_list', 'minimum_value', 'maximum_value', 'pattern', 'structured_pattern', 'unit', 'implicit_prefix', 'value_presence', 'equals_string', 'equals_string_in', 'equals_number', 'equals_expression', 'exact_cardinality', 'minimum_cardinality', 'maximum_cardinality', 'has_member', 'all_members', 'none_of', 'exactly_one_of', 'any_of', 'all_of'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_slot_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_slot_expression': ClassDefinition(name='anonymous_slot_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'slot_definition': ClassDefinition(name='slot_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element that describes how instances are related to other instances', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['slot', 'field', 'property', 'attribute', 'column', 'variable'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['rdf:Property', 'qb:ComponentProperty'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=3, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['slot_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['singular_name', 'domain', 'slot_uri', 'array', 'inherited', 'readonly', 'ifabsent', 'list_elements_unique', 'list_elements_ordered', 'shared', 'key', 'identifier', 'designates_type', 'alias', 'owner', 'domain_of', 'subproperty_of', 'symmetric', 'reflexive', 'locally_reflexive', 'irreflexive', 'asymmetric', 'transitive', 'inverse', 'is_class_field', 'transitive_form_of', 'reflexive_transitive_form_of', 'role', 'is_usage_slot', 'usage_slot_name', 'relational_role', 'slot_group', 'is_grouping_slot', 'path_rule', 'disjoint_with', 'children_are_mutually_disjoint', 'union_of', 'type_mappings'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent slot from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin slots from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='slot_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_expression': ClassDefinition(name='class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A boolean expression that can be used to dynamically determine membership of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['any_of', 'exactly_one_of', 'none_of', 'all_of', 'slot_conditions'], slot_usage={'any_of': SlotDefinition(name='any_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'all_of': SlotDefinition(name='all_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exactly_one_of': SlotDefinition(name='exactly_one_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'none_of': SlotDefinition(name='none_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'path_expression', 'slot_expression', 'class_expression'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='anonymous_class_expression', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'anonymous_class_expression': ClassDefinition(name='anonymous_class_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='anonymous_expression', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['is_a'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_definition': ClassDefinition(name='class_definition', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an element whose instances are complex objects that may have slot-value assignments', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'MinimalSubset', 'BasicSubset', 'RelationalModelProfile', 'ObjectOrientedProfile', 'OwlProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['table', 'record', 'template', 'message', 'observation'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['owl:Class'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=2, categories=[], keywords=[], is_a='definition', abstract=None, mixin=None, mixins=['class_expression'], apply_to=[], values_from=[], string_serialization=None, slots=['slots', 'slot_usage', 'attributes', 'class_uri', 'subclass_of', 'union_of', 'defining_slots', 'tree_root', 'unique_keys', 'rules', 'classification_rules', 'slot_names_unique', 'represents_relationship', 'disjoint_with', 'children_are_mutually_disjoint'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A primary parent class from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'anonymous_class_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A collection of secondary parent mixin classes from which inheritable metaslots are propagated', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'apply_to': SlotDefinition(name='apply_to', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'rules': SlotDefinition(name='rules', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_rule', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'disjoint_with': SlotDefinition(name='disjoint_with', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'union_of': SlotDefinition(name='union_of', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_definition', 'slot_definition', 'class_definition'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='class_definition', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_level_rule': ClassDefinition(name='class_level_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that is applied to classes', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=True, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=[], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'class_rule': ClassDefinition(name='class_rule', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A rule that applies to instances of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['if rule'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['sh:TripleRule', 'swrl:Imp'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='class_level_rule', abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['preconditions', 'postconditions', 'elseconditions', 'bidirectional', 'open_world', 'rank', 'deactivated'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'array_expression': ClassDefinition(name='array_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['exact_number_dimensions', 'minimum_number_dimensions', 'maximum_number_dimensions', 'dimensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'dimension_expression': ClassDefinition(name='dimension_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='defines one of the dimensions of an array', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['alias', 'maximum_cardinality', 'minimum_cardinality', 'exact_cardinality'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'pattern_expression': ClassDefinition(name='pattern_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a regular expression pattern used to evaluate conformance of a string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['syntax', 'interpolated', 'partial_match'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'import_expression': ClassDefinition(name='import_expression', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an expression describing an import', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status='testing', rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['import_from', 'import_as', 'import_map'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'setting': ClassDefinition(name='setting', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='assignment of a key to a value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['setting_key', 'setting_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'prefix': ClassDefinition(name='prefix', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='prefix URI tuple', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=12, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['prefix_prefix', 'prefix_reference'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'local_name': ClassDefinition(name='local_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed label', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['local_name_source', 'local_name_value'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'example': ClassDefinition(name='example', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='usage example and description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['value', 'value_description', 'value_object'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'alt_description': ClassDefinition(name='alt_description', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an attributed description', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['structured description'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['alt_description_source', 'alt_description_text'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'permissible_value': ClassDefinition(name='permissible_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a permissible value, accompanied by intended text and an optional mapping to a concept URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['PV'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['skos:Concept'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=16, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['text', 'description', 'meaning', 'unit', 'instantiates', 'implements', 'is_a', 'mixins'], slot_usage={'is_a': SlotDefinition(name='is_a', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'mixins': SlotDefinition(name='mixins', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='permissible_value', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'unique_key': ClassDefinition(name='unique_key', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of slots whose values uniquely identify an instance of a class', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset', 'BasicSubset', 'RelationalModelProfile'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=20, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['unique_key_name', 'unique_key_slots', 'consider_nulls_inequal'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'type_mapping': ClassDefinition(name='type_mapping', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Represents how a slot or type can be serialized to a format.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=['SpecificationSubset'], from_schema='https://w3id.org/linkml/meta', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=21, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=['extensible', 'annotatable', 'common_metadata'], apply_to=[], values_from=[], string_serialization=None, slots=['framework_key', 'mapped_type', 'string_serialization'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file=None, source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:units': SchemaDefinition(name='units', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Units datamodel', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/units', version=None, imports=['linkml:types', 'linkml:extensions', 'linkml:annotations', 'linkml:mappings'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'qudt': Prefix(prefix_prefix='qudt', prefix_reference='http://qudt.org/schema/qudt/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'unit': SlotDefinition(name='unit', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='an encoding of a unit', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:unit', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['type_expression', 'slot_expression', 'permissible_value'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='UnitOfMeasure', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ucum_code': SlotDefinition(name='ucum_code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='associates a QUDT unit with its UCUM code (case-sensitive).', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='UnitOfMeasure', slot_uri='qudt:ucumCode', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=True, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'derivation': SlotDefinition(name='derivation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Expression for deriving this unit from other units', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='string', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'has_quantity_kind': SlotDefinition(name='has_quantity_kind', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Concept in a vocabulary or ontology that denotes the kind of quantity being measured, e.g. length', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Potential ontologies include but are not limited to PATO, NCIT, OBOE, qudt.quantityKind'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:hasQuantityKind', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'iec61360code': SlotDefinition(name='iec61360code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:iec61360Code', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'symbol': SlotDefinition(name='symbol', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='name of the unit encoded as a symbol', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:symbol', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'abbreviation': SlotDefinition(name='abbreviation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An abbreviation for a unit is a short ASCII string that is used in place of the full name for the unit in contexts where non-ASCII characters would be problematic, or where using the abbreviation will enhance readability. When a power of a base unit needs to be expressed, such as squares this can be done using abbreviations rather than symbols (source: qudt)', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='qudt:abbreviation', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'descriptive_name': SlotDefinition(name='descriptive_name', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='the spelled out name of the unit, for example, meter', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='rdfs:label', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'UnitOfMeasure': ClassDefinition(name='UnitOfMeasure', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A unit of measure, or unit, is a particular quantity value that has been chosen as a scale for measuring other quantities the same kind (more generally of equivalent dimension).', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/units', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['symbol', 'abbreviation', 'descriptive_name', 'exact mappings', 'ucum_code', 'derivation', 'has_quantity_kind', 'iec61360code'], slot_usage={'exact mappings': SlotDefinition(name='exact mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Used to link a unit to equivalent concepts in ontologies such as UO, SNOMED, OEM, OBOE, NCIT', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=['Do not use this to encode mappings to systems for which a dedicated field exists'], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, attributes={}, class_uri='qudt:Unit', subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'ucum_code': SlotDefinition(name='ucum_code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'iec61360code': SlotDefinition(name='iec61360code', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'symbol': SlotDefinition(name='symbol', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}), AnonymousClassExpression(extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={'exact_mappings': SlotDefinition(name='exact_mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range=None, range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])})], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/units.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:mappings': SchemaDefinition(name='mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='LinkML model for mappings', alt_descriptions={}, title='LinkML Schema Mappings', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/mappings', version='2.0.0', imports=['linkml:types'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'skos': Prefix(prefix_prefix='skos', prefix_reference='http://www.w3.org/2004/02/skos/core#'), 'OIO': Prefix(prefix_prefix='OIO', prefix_reference='http://www.geneontology.org/formats/oboInOwl#'), 'IAO': Prefix(prefix_prefix='IAO', prefix_reference='http://purl.obolibrary.org/obo/IAO_')}, emit_prefixes=['linkml', 'rdf', 'rdfs', 'xsd', 'skos', 'OIO', 'IAO'], default_curi_maps=['semweb_context'], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'mappings': SlotDefinition(name='mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=['xrefs', 'identifiers', 'alternate identifiers', 'alternate ids'], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:mappingRelation', array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'exact mappings': SlotDefinition(name='exact mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have identical meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:exactMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['UnitOfMeasure', 'common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'close mappings': SlotDefinition(name='close mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have close meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:closeMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'related mappings': SlotDefinition(name='related mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have related meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:relatedMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'narrow mappings': SlotDefinition(name='narrow mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have narrower meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:narrowMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'broad mappings': SlotDefinition(name='broad mappings', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A list of terms from different schemas or terminology systems that have broader meaning.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='mappings', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri='skos:broadMatch', array=None, inherited=False, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated element has exact replacement': SlotDefinition(name='deprecated element has exact replacement', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='When an element is deprecated, it can be automatically replaced by this uri or curie', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=['IAO:0100001'], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'deprecated element has possible replacement': SlotDefinition(name='deprecated element has possible replacement', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='When an element is deprecated, it can be potentially replaced by this uri or curie', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/mappings', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=['OIO:consider'], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain=None, slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['common_metadata'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/mappings.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:types': SchemaDefinition(name='types', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Shared type definitions for the core LinkML mode and metamodel', alt_descriptions={}, title='Core LinkML metamodel types', deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/types', version=None, imports=[], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/'), 'xsd': Prefix(prefix_prefix='xsd', prefix_reference='http://www.w3.org/2001/XMLSchema#'), 'shex': Prefix(prefix_prefix='shex', prefix_reference='http://www.w3.org/ns/shex#'), 'schema': Prefix(prefix_prefix='schema', prefix_reference='http://schema.org/')}, emit_prefixes=[], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={'string': TypeDefinition(name='string', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A character string', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['In RDF serializations, a slot with range of string is treated as a literal or type xsd:string. If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "string".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Text'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'integer': TypeDefinition(name='integer', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='An integer', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "integer".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Integer'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='int', uri='xsd:integer', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'boolean': TypeDefinition(name='boolean', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A binary (true or false) value', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "boolean".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Boolean'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Bool', uri='xsd:boolean', repr='bool', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'float': TypeDefinition(name='float', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:float specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "float".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Float'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='float', uri='xsd:float', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'double': TypeDefinition(name='double', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number that conforms to the xsd:double specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "double".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:Float'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='float', uri='xsd:double', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'decimal': TypeDefinition(name='decimal', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A real number with arbitrary precision that conforms to the xsd:decimal specification', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "decimal".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=['schema:Number'], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Decimal', uri='xsd:decimal', repr=None, union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'time': TypeDefinition(name='time', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A time object represents a (local) time of day, independent of any particular day', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['URI is dateTime because OWL reasoners do not work with straight date or time', 'If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "time".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Time'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDTime', uri='xsd:time', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date': TypeDefinition(name='date', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a date (year, month and day) in an idealized calendar', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=["URI is dateTime because OWL reasoners don't work with straight date or time", 'If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "date".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:Date'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDDate', uri='xsd:date', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'datetime': TypeDefinition(name='datetime', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='The combination of a date and time', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "datetime".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=['schema:DateTime'], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='XSDDateTime', uri='xsd:dateTime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'date_or_datetime': TypeDefinition(name='date_or_datetime', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Either a date or a datetime', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "date_or_datetime".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='linkml:DateOrDatetime', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uriorcurie': TypeDefinition(name='uriorcurie', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a URI or a CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "uriorcurie".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='URIorCURIE', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'curie': TypeDefinition(name='curie', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.w3.org/TR/curie/', implements=[], instantiates=[], extensions={}, annotations={}, description='a compact URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "curie".'], comments=['in RDF serializations this MUST be expanded to a URI', 'in non-RDF serializations MAY be serialized as the compact representation'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='Curie', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'uri': TypeDefinition(name='uri', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.ietf.org/rfc/rfc3987.txt', implements=[], instantiates=[], extensions={}, annotations={}, description='a complete URI', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "uri".'], comments=['in RDF serializations a slot with range of uri is treated as a literal or type xsd:anyURI unless it is an identifier or a reference to an identifier, in which case it is translated directly to a node'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=['schema:URL'], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='URI', uri='xsd:anyURI', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'ncname': TypeDefinition(name='ncname', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Prefix part of CURIE', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "ncname".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='NCName', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'objectidentifier': TypeDefinition(name='objectidentifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A URI or CURIE that represents an object in the model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "objectidentifier".'], comments=['Used for inheritance and type checking'], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='ElementIdentifier', uri='shex:iri', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'nodeidentifier': TypeDefinition(name='nodeidentifier', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='A URI, CURIE or BNODE that represents a node in a model.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "nodeidentifier".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='NodeIdentifier', uri='shex:nonLiteral', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'jsonpointer': TypeDefinition(name='jsonpointer', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://datatracker.ietf.org/doc/html/rfc6901', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "jsonpointer".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'jsonpath': TypeDefinition(name='jsonpath', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.ietf.org/archive/id/draft-goessner-dispatch-jsonpath-00.html', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "jsonpath".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'sparqlpath': TypeDefinition(name='sparqlpath', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to='https://www.w3.org/TR/sparql11-query/#propertypaths', implements=[], instantiates=[], extensions={}, annotations={}, description='A string encoding a SPARQL Property Path. The value of the string MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded as RDF.', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=['If you are authoring schemas in LinkML YAML, the type is referenced with the lower case "sparqlpath".'], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/types', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], typeof=None, base='str', uri='xsd:string', repr='str', union_of=[], pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, equals_string=None, equals_string_in=[], equals_number=None, minimum_value=None, maximum_value=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, enums={}, slots={}, classes={}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/types.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:annotations': SchemaDefinition(name='annotations', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Annotations mixin', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/annotations', version='2.0.0', imports=['linkml:types', 'linkml:extensions'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'annotations': SlotDefinition(name='annotations', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a collection of tag/text tuples with the semantics of OWL Annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a='extensions', abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='annotatable', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['annotatable', 'annotation'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='annotation', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'annotatable': ClassDefinition(name='annotatable', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='mixin for classes that support annotations', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['annotations'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'annotation': ClassDefinition(name='annotation', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag/value pair with the semantics of OWL Annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/annotations', imported_from=None, source=None, in_language=None, see_also=[], 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source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/annotations.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[]), 'linkml:extensions': SchemaDefinition(name='extensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='Extension mixin', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema=None, imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], id='https://w3id.org/linkml/extensions', version='2.0.0', imports=['linkml:types'], license='https://creativecommons.org/publicdomain/zero/1.0/', prefixes={'linkml': Prefix(prefix_prefix='linkml', prefix_reference='https://w3id.org/linkml/')}, emit_prefixes=['linkml'], default_curi_maps=[], default_prefix='linkml', default_range='string', subsets={}, types={}, enums={}, slots={'extensions': SlotDefinition(name='extensions', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag/text tuple attached to an arbitrary element', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extensible', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias=None, owner=None, domain_of=['extension', 'extensible'], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='extension', range_expression=None, enum_range=None, bindings=[], required=None, recommended=None, multivalued=True, inlined=True, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'extension_tag': SlotDefinition(name='extension_tag', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='a tag associated with an extension', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extension', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=True, identifier=None, designates_type=None, alias='tag', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='uriorcurie', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[]), 'extension_value': SlotDefinition(name='extension_value', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={'simple_dict_value': Annotation(tag='simple_dict_value', value=True, extensions={}, annotations={})}, description='the actual annotation', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=None, mixins=[], apply_to=[], values_from=[], string_serialization=None, singular_name=None, domain='extension', slot_uri=None, array=None, inherited=None, readonly=None, ifabsent=None, list_elements_unique=None, list_elements_ordered=None, shared=None, key=None, identifier=None, designates_type=None, alias='value', owner=None, domain_of=[], subproperty_of=None, symmetric=None, reflexive=None, locally_reflexive=None, irreflexive=None, asymmetric=None, transitive=None, inverse=None, is_class_field=None, transitive_form_of=None, reflexive_transitive_form_of=None, role=None, is_usage_slot=None, usage_slot_name=None, relational_role=None, slot_group=None, is_grouping_slot=None, path_rule=None, disjoint_with=[], children_are_mutually_disjoint=None, union_of=[], type_mappings=[], range='AnyValue', range_expression=None, enum_range=None, bindings=[], required=True, recommended=None, multivalued=None, inlined=None, inlined_as_list=None, minimum_value=None, maximum_value=None, pattern=None, structured_pattern=None, unit=None, implicit_prefix=None, value_presence=None, equals_string=None, equals_string_in=[], equals_number=None, equals_expression=None, exact_cardinality=None, minimum_cardinality=None, maximum_cardinality=None, has_member=None, all_members=None, none_of=[], exactly_one_of=[], any_of=[], all_of=[])}, classes={'AnyValue': ClassDefinition(name='AnyValue', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description=None, alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], 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slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={}), 'extensible': ClassDefinition(name='extensible', id_prefixes=[], id_prefixes_are_closed=None, definition_uri=None, local_names={}, conforms_to=None, implements=[], instantiates=[], extensions={}, annotations={}, description='mixin for classes that support extension', alt_descriptions={}, title=None, deprecated=None, todos=[], notes=[], comments=[], examples=[], in_subset=[], from_schema='https://w3id.org/linkml/extensions', imported_from=None, source=None, in_language=None, see_also=[], deprecated_element_has_exact_replacement=None, deprecated_element_has_possible_replacement=None, aliases=[], structured_aliases={}, mappings=[], exact_mappings=[], close_mappings=[], related_mappings=[], narrow_mappings=[], broad_mappings=[], created_by=None, contributors=[], created_on=None, last_updated_on=None, modified_by=None, status=None, rank=None, categories=[], keywords=[], is_a=None, abstract=None, mixin=True, mixins=[], apply_to=[], values_from=[], string_serialization=None, slots=['extensions'], slot_usage={}, attributes={}, class_uri=None, subclass_of=None, union_of=[], defining_slots=[], tree_root=None, unique_keys={}, rules=[], classification_rules=[], slot_names_unique=None, represents_relationship=None, disjoint_with=[], children_are_mutually_disjoint=None, any_of=[], exactly_one_of=[], none_of=[], all_of=[], slot_conditions={})}, metamodel_version=None, source_file='/home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/linkml_runtime/linkml_model/model/schema/extensions.yaml', source_file_date=None, source_file_size=None, generation_date=None, slot_names_unique=None, settings={}, bindings=[])}, importmap={}, modifications=0, uuid='1fbd56e8-76b2-4776-affc-bd850cd8688b'), mappings={}, initial_metamodel_mappings={}, metamodel_mappings=defaultdict(, {'description': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#definition'), rdflib.term.URIRef('https://w3id.org/linkml/description'), rdflib.term.URIRef('http://purl.org/dc/terms/description'), rdflib.term.URIRef('http://schema.org/description')], 'is_a': [rdflib.term.URIRef('https://w3id.org/linkml/is_a'), rdflib.term.URIRef('https://w3id.org/linkml/is_a')], 'domain_of': [rdflib.term.URIRef('https://w3id.org/linkml/domain_of'), rdflib.term.URIRef('https://w3id.org/linkml/domain_of'), rdflib.term.URIRef('http://schema.org/domainIncludes'), rdflib.term.URIRef('http://semanticscience.org/resource/SIO_000011')], 'range': [rdflib.term.URIRef('https://w3id.org/linkml/range'), rdflib.term.URIRef('https://w3id.org/linkml/range')], 'exact_mappings': [rdflib.term.URIRef('http://www.w3.org/2002/07/owl#sameAs'), rdflib.term.URIRef('http://schema.org/sameAs')], 'ClassDefinition': [rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#Class'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Class'), rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#Concept')], 'SlotDefinition': [rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#Property'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ObjectProperty'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#DatatypeProperty'), rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AnnotationProperty')], 'AnyValue': [rdflib.term.URIRef('https://w3id.org/linkml/Any'), rdflib.term.URIRef('https://w3id.org/linkml/AnyValue')], 'extension': [rdflib.term.URIRef('https://w3id.org/linkml/Extension'), rdflib.term.URIRef('https://w3id.org/linkml/Extension')], 'extensible': [rdflib.term.URIRef('https://w3id.org/linkml/Extensible'), 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rdflib.term.URIRef('https://w3id.org/linkml/transitive_form_of')], 'reflexive_transitive_form_of': [rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of'), rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of')], 'inverse': [rdflib.term.URIRef('http://www.w3.org/2002/07/owl#inverseOf'), rdflib.term.URIRef('https://w3id.org/linkml/inverse')], 'is_class_field': [rdflib.term.URIRef('https://w3id.org/linkml/is_class_field'), rdflib.term.URIRef('https://w3id.org/linkml/is_class_field')], 'role': [rdflib.term.URIRef('https://w3id.org/linkml/role'), rdflib.term.URIRef('https://w3id.org/linkml/role')], 'minimum_value': [rdflib.term.URIRef('https://w3id.org/linkml/minimum_value'), rdflib.term.URIRef('https://w3id.org/linkml/minimum_value')], 'maximum_value': [rdflib.term.URIRef('https://w3id.org/linkml/maximum_value'), rdflib.term.URIRef('https://w3id.org/linkml/maximum_value')], 'interpolated': [rdflib.term.URIRef('https://w3id.org/linkml/interpolated'), rdflib.term.URIRef('https://w3id.org/linkml/interpolated')], 'partial_match': [rdflib.term.URIRef('https://w3id.org/linkml/partial_match'), rdflib.term.URIRef('https://w3id.org/linkml/partial_match')], 'pattern': [rdflib.term.URIRef('https://w3id.org/linkml/pattern'), rdflib.term.URIRef('https://w3id.org/linkml/pattern')], 'syntax': [rdflib.term.URIRef('https://w3id.org/linkml/syntax'), rdflib.term.URIRef('https://w3id.org/linkml/syntax')], 'structured_pattern': [rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern'), rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern')], 'string_serialization': [rdflib.term.URIRef('https://w3id.org/linkml/string_serialization'), rdflib.term.URIRef('https://w3id.org/linkml/string_serialization')], 'bindings': [rdflib.term.URIRef('https://w3id.org/linkml/bindings'), rdflib.term.URIRef('https://w3id.org/linkml/bindings')], 'binds_value_of': [rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of'), rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of')], 'obligation_level': [rdflib.term.URIRef('https://w3id.org/linkml/obligation_level'), rdflib.term.URIRef('https://w3id.org/linkml/obligation_level')], 'type_mappings': [rdflib.term.URIRef('https://w3id.org/linkml/type_mappings'), rdflib.term.URIRef('https://w3id.org/linkml/type_mappings')], 'framework_key': [rdflib.term.URIRef('https://w3id.org/linkml/framework_key'), rdflib.term.URIRef('https://w3id.org/linkml/framework_key')], 'mapped_type': [rdflib.term.URIRef('https://w3id.org/linkml/mapped_type'), rdflib.term.URIRef('https://w3id.org/linkml/mapped_type')], 'typeof': [rdflib.term.URIRef('https://w3id.org/linkml/typeof'), rdflib.term.URIRef('https://w3id.org/linkml/typeof')], 'base': [rdflib.term.URIRef('https://w3id.org/linkml/base'), rdflib.term.URIRef('https://w3id.org/linkml/base')], 'type_uri': [rdflib.term.URIRef('https://w3id.org/linkml/type_uri'), rdflib.term.URIRef('https://w3id.org/linkml/type_uri')], 'repr': [rdflib.term.URIRef('https://w3id.org/linkml/repr'), rdflib.term.URIRef('https://w3id.org/linkml/repr')], 'alt_description_text': [rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text'), rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text')], 'alt_description_source': [rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source'), rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source')], 'alt_descriptions': [rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions'), rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions')], 'value': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#example'), rdflib.term.URIRef('https://w3id.org/linkml/value')], 'value_description': [rdflib.term.URIRef('https://w3id.org/linkml/value_description'), rdflib.term.URIRef('https://w3id.org/linkml/value_description')], 'value_object': [rdflib.term.URIRef('https://w3id.org/linkml/value_object'), rdflib.term.URIRef('https://w3id.org/linkml/value_object')], 'examples': [rdflib.term.URIRef('https://w3id.org/linkml/examples'), rdflib.term.URIRef('https://w3id.org/linkml/examples'), rdflib.term.URIRef('https://vocab.org/vann/example')], 'prefix_prefix': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#prefix'), rdflib.term.URIRef('https://w3id.org/linkml/prefix_prefix')], 'prefix_reference': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#namespace'), rdflib.term.URIRef('https://w3id.org/linkml/prefix_reference')], 'prefixes': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#declare'), rdflib.term.URIRef('https://w3id.org/linkml/prefixes')], 'setting_key': [rdflib.term.URIRef('https://w3id.org/linkml/setting_key'), rdflib.term.URIRef('https://w3id.org/linkml/setting_key')], 'setting_value': [rdflib.term.URIRef('https://w3id.org/linkml/setting_value'), rdflib.term.URIRef('https://w3id.org/linkml/setting_value')], 'settings': [rdflib.term.URIRef('https://w3id.org/linkml/settings'), rdflib.term.URIRef('https://w3id.org/linkml/settings')], 'import_from': [rdflib.term.URIRef('https://w3id.org/linkml/import_from'), rdflib.term.URIRef('https://w3id.org/linkml/import_from')], 'import_as': [rdflib.term.URIRef('https://w3id.org/linkml/import_as'), rdflib.term.URIRef('https://w3id.org/linkml/import_as')], 'import_map': [rdflib.term.URIRef('https://w3id.org/linkml/import_map'), rdflib.term.URIRef('https://w3id.org/linkml/import_map')], 'local_name_source': [rdflib.term.URIRef('https://w3id.org/linkml/local_name_source'), rdflib.term.URIRef('https://w3id.org/linkml/local_name_source')], 'local_name_value': [rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#altLabel'), rdflib.term.URIRef('https://w3id.org/linkml/local_name_value')], 'local_names': [rdflib.term.URIRef('https://w3id.org/linkml/local_names'), rdflib.term.URIRef('https://w3id.org/linkml/local_names')], 'slot_group': [rdflib.term.URIRef('http://www.w3.org/ns/shacl#group'), rdflib.term.URIRef('https://w3id.org/linkml/slot_group')], 'is_grouping_slot': [rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'), rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'), rdflib.term.URIRef('http://www.w3.org/ns/shacl#PropertyGroup')], 'followed_by': [rdflib.term.URIRef('https://w3id.org/linkml/followed_by'), rdflib.term.URIRef('https://w3id.org/linkml/followed_by')], 'reversed': [rdflib.term.URIRef('https://w3id.org/linkml/reversed'), rdflib.term.URIRef('https://w3id.org/linkml/reversed')], 'traverse': [rdflib.term.URIRef('https://w3id.org/linkml/traverse'), rdflib.term.URIRef('https://w3id.org/linkml/traverse')], 'path_rule': [rdflib.term.URIRef('https://w3id.org/linkml/path_rule'), rdflib.term.URIRef('https://w3id.org/linkml/path_rule')], 'represents_relationship': [rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship'), rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship')], 'relational_role': [rdflib.term.URIRef('https://w3id.org/linkml/relational_role'), rdflib.term.URIRef('https://w3id.org/linkml/relational_role')], 'pv_formula_options': [], 'presence_enum': [], 'relational_role_enum': [], 'alias_predicate_enum': [], 'obligation_level_enum': [], 'string': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/string'), rdflib.term.URIRef('http://schema.org/Text')], 'integer': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#integer'), rdflib.term.URIRef('https://w3id.org/linkml/integer'), rdflib.term.URIRef('http://schema.org/Integer')], 'boolean': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#boolean'), rdflib.term.URIRef('https://w3id.org/linkml/boolean'), rdflib.term.URIRef('http://schema.org/Boolean')], 'float': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#float'), rdflib.term.URIRef('https://w3id.org/linkml/float'), rdflib.term.URIRef('http://schema.org/Float')], 'double': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#double'), rdflib.term.URIRef('https://w3id.org/linkml/double'), rdflib.term.URIRef('http://schema.org/Float')], 'decimal': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#decimal'), rdflib.term.URIRef('https://w3id.org/linkml/decimal'), rdflib.term.URIRef('http://schema.org/Number')], 'time': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#time'), rdflib.term.URIRef('https://w3id.org/linkml/time'), rdflib.term.URIRef('http://schema.org/Time')], 'date': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#date'), rdflib.term.URIRef('https://w3id.org/linkml/date'), rdflib.term.URIRef('http://schema.org/Date')], 'datetime': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#dateTime'), rdflib.term.URIRef('https://w3id.org/linkml/datetime'), rdflib.term.URIRef('http://schema.org/DateTime')], 'date_or_datetime': [rdflib.term.URIRef('https://w3id.org/linkml/DateOrDatetime'), rdflib.term.URIRef('https://w3id.org/linkml/date_or_datetime')], 'uriorcurie': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'), rdflib.term.URIRef('https://w3id.org/linkml/uriorcurie')], 'curie': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/curie')], 'uri': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'), rdflib.term.URIRef('https://w3id.org/linkml/uri'), rdflib.term.URIRef('http://schema.org/URL')], 'ncname': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/ncname')], 'objectidentifier': [rdflib.term.URIRef('http://www.w3.org/ns/shex#iri'), rdflib.term.URIRef('https://w3id.org/linkml/objectidentifier')], 'nodeidentifier': [rdflib.term.URIRef('http://www.w3.org/ns/shex#nonLiteral'), rdflib.term.URIRef('https://w3id.org/linkml/nodeidentifier')], 'jsonpointer': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/jsonpointer')], 'jsonpath': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/jsonpath')], 'sparqlpath': [rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'), rdflib.term.URIRef('https://w3id.org/linkml/sparqlpath')], 'MinimalSubset': [], 'BasicSubset': [], 'SpecificationSubset': [], 'RelationalModelProfile': [], 'ObjectOrientedProfile': [], 'OwlProfile': []}), reverse_metamodel_mappings=defaultdict(, {rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#comment'): ['description', 'comments'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#subClassOf'): ['is_a', 'subclass_of'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#broader'): ['is_a'], rdflib.term.URIRef('http://schema.org/domainIncludes'): ['domain_of', 'domain_of'], rdflib.term.URIRef('https://schema.org/domainIncludes'): ['domain_of'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#domain'): ['domain_of'], rdflib.term.URIRef('http://schema.org/rangeIncludes'): ['range'], rdflib.term.URIRef('https://schema.org/rangeIncludes'): ['range'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#range'): ['range'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#sameAs'): ['exact_mappings'], rdflib.term.URIRef('http://schema.org/sameAs'): ['exact_mappings'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#Class'): ['ClassDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Class'): ['ClassDefinition', 'class_definition'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#Concept'): ['ClassDefinition', 'permissible_value'], rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#Property'): ['SlotDefinition', 'slot_definition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ObjectProperty'): ['SlotDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#DatatypeProperty'): ['SlotDefinition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AnnotationProperty'): ['SlotDefinition'], rdflib.term.URIRef('https://w3id.org/linkml/Any'): ['AnyValue', 'Anything'], rdflib.term.URIRef('https://w3id.org/linkml/AnyValue'): ['AnyValue'], rdflib.term.URIRef('https://w3id.org/linkml/Extension'): ['extension', 'extension'], rdflib.term.URIRef('https://w3id.org/linkml/Extensible'): ['extensible', 'extensible'], rdflib.term.URIRef('https://w3id.org/linkml/Annotatable'): ['annotatable', 'annotatable'], rdflib.term.URIRef('https://w3id.org/linkml/Annotation'): ['annotation', 'annotation'], rdflib.term.URIRef('http://qudt.org/schema/qudt/Unit'): ['UnitOfMeasure'], rdflib.term.URIRef('https://w3id.org/linkml/UnitOfMeasure'): ['UnitOfMeasure'], rdflib.term.URIRef('https://w3id.org/linkml/Anything'): ['Anything'], rdflib.term.URIRef('https://w3id.org/linkml/CommonMetadata'): ['common_metadata', 'common_metadata'], rdflib.term.URIRef('https://w3id.org/linkml/Element'): ['element', 'element'], rdflib.term.URIRef('https://w3id.org/linkml/SchemaDefinition'): ['schema_definition', 'schema_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#ComponentSet'): ['schema_definition'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#Ontology'): ['schema_definition'], rdflib.term.URIRef('https://w3id.org/linkml/TypeExpression'): ['type_expression', 'type_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousTypeExpression'): ['anonymous_type_expression', 'anonymous_type_expression'], rdflib.term.URIRef('https://w3id.org/linkml/TypeDefinition'): ['type_definition', 'type_definition'], rdflib.term.URIRef('https://w3id.org/linkml/SubsetDefinition'): ['subset_definition', 'subset_definition'], rdflib.term.URIRef('https://w3id.org/linkml/Definition'): ['definition', 'definition'], rdflib.term.URIRef('https://w3id.org/linkml/EnumExpression'): ['enum_expression', 'enum_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousEnumExpression'): ['anonymous_enum_expression', 'anonymous_enum_expression'], rdflib.term.URIRef('https://w3id.org/linkml/EnumDefinition'): ['enum_definition', 'enum_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#HierarchicalCodeList'): ['enum_definition'], rdflib.term.URIRef('http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C113497'): ['enum_definition'], rdflib.term.URIRef('http://rdf.cdisc.org/mms#ValueDomain'): ['enum_definition'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#ConceptScheme'): ['enum_definition'], rdflib.term.URIRef('https://w3id.org/linkml/EnumBinding'): ['enum_binding', 'enum_binding'], rdflib.term.URIRef('https://w3id.org/linkml/MatchQuery'): ['match_query', 'match_query'], rdflib.term.URIRef('https://w3id.org/linkml/ReachabilityQuery'): ['reachability_query', 'reachability_query'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#Label'): ['structured_alias'], rdflib.term.URIRef('https://w3id.org/linkml/StructuredAlias'): ['structured_alias'], rdflib.term.URIRef('https://w3id.org/linkml/Expression'): ['expression', 'expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousExpression'): ['anonymous_expression', 'anonymous_expression'], rdflib.term.URIRef('https://w3id.org/linkml/PathExpression'): ['path_expression', 'path_expression'], rdflib.term.URIRef('https://w3id.org/linkml/SlotExpression'): ['slot_expression', 'slot_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousSlotExpression'): ['anonymous_slot_expression', 'anonymous_slot_expression'], rdflib.term.URIRef('https://w3id.org/linkml/SlotDefinition'): ['slot_definition', 'slot_definition'], rdflib.term.URIRef('http://purl.org/linked-data/cube#ComponentProperty'): ['slot_definition'], rdflib.term.URIRef('https://w3id.org/linkml/ClassExpression'): ['class_expression', 'class_expression'], rdflib.term.URIRef('https://w3id.org/linkml/AnonymousClassExpression'): ['anonymous_class_expression', 'anonymous_class_expression'], rdflib.term.URIRef('https://w3id.org/linkml/ClassDefinition'): ['class_definition', 'class_definition'], rdflib.term.URIRef('https://w3id.org/linkml/ClassLevelRule'): ['class_level_rule', 'class_level_rule'], rdflib.term.URIRef('https://w3id.org/linkml/ClassRule'): ['class_rule', 'class_rule'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#TripleRule'): ['class_rule'], rdflib.term.URIRef('http://www.w3.org/2003/11/swrl#Imp'): ['class_rule'], rdflib.term.URIRef('https://w3id.org/linkml/ArrayExpression'): ['array_expression', 'array_expression'], rdflib.term.URIRef('https://w3id.org/linkml/DimensionExpression'): ['dimension_expression', 'dimension_expression'], rdflib.term.URIRef('https://w3id.org/linkml/PatternExpression'): ['pattern_expression', 'pattern_expression'], rdflib.term.URIRef('https://w3id.org/linkml/ImportExpression'): ['import_expression', 'import_expression'], rdflib.term.URIRef('https://w3id.org/linkml/Setting'): ['setting', 'setting'], rdflib.term.URIRef('https://w3id.org/linkml/Prefix'): ['prefix', 'prefix'], rdflib.term.URIRef('https://w3id.org/linkml/LocalName'): ['local_name', 'local_name'], rdflib.term.URIRef('https://w3id.org/linkml/Example'): ['example', 'example'], rdflib.term.URIRef('https://w3id.org/linkml/AltDescription'): ['alt_description', 'alt_description'], rdflib.term.URIRef('https://w3id.org/linkml/PermissibleValue'): ['permissible_value', 'permissible_value'], rdflib.term.URIRef('https://w3id.org/linkml/UniqueKey'): ['unique_key', 'unique_key'], rdflib.term.URIRef('https://w3id.org/linkml/TypeMapping'): ['type_mapping', 'type_mapping'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#mappingRelation'): ['mappings'], rdflib.term.URIRef('https://w3id.org/linkml/mappings'): ['mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#exactMatch'): ['exact mappings'], rdflib.term.URIRef('https://w3id.org/linkml/exact_mappings'): ['exact mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#closeMatch'): ['close mappings'], rdflib.term.URIRef('https://w3id.org/linkml/close_mappings'): ['close mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#relatedMatch'): ['related mappings'], rdflib.term.URIRef('https://w3id.org/linkml/related_mappings'): ['related mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#narrowMatch'): ['narrow mappings'], rdflib.term.URIRef('https://w3id.org/linkml/narrow_mappings'): ['narrow mappings'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#broadMatch'): ['broad mappings'], rdflib.term.URIRef('https://w3id.org/linkml/broad_mappings'): ['broad mappings'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated_element_has_exact_replacement'): ['deprecated element has exact replacement', 'deprecated element has exact replacement'], rdflib.term.URIRef('http://purl.obolibrary.org/obo/IAO_0100001'): ['deprecated element has exact replacement'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated_element_has_possible_replacement'): ['deprecated element has possible replacement', 'deprecated element has possible replacement'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#consider'): ['deprecated element has possible replacement'], rdflib.term.URIRef('https://w3id.org/linkml/extensions'): ['extensions', 'extensions'], rdflib.term.URIRef('https://w3id.org/linkml/extension_tag'): ['extension_tag', 'extension_tag'], rdflib.term.URIRef('https://w3id.org/linkml/extension_value'): ['extension_value', 'extension_value'], rdflib.term.URIRef('https://w3id.org/linkml/annotations'): ['annotations', 'annotations'], rdflib.term.URIRef('http://qudt.org/schema/qudt/unit'): ['unit'], rdflib.term.URIRef('https://w3id.org/linkml/unit'): ['unit'], rdflib.term.URIRef('http://qudt.org/schema/qudt/ucumCode'): ['ucum_code'], rdflib.term.URIRef('https://w3id.org/linkml/ucum_code'): ['ucum_code'], rdflib.term.URIRef('https://w3id.org/linkml/derivation'): ['derivation', 'derivation'], rdflib.term.URIRef('http://qudt.org/schema/qudt/hasQuantityKind'): ['has_quantity_kind'], rdflib.term.URIRef('https://w3id.org/linkml/has_quantity_kind'): ['has_quantity_kind'], rdflib.term.URIRef('http://qudt.org/schema/qudt/iec61360Code'): ['iec61360code'], rdflib.term.URIRef('https://w3id.org/linkml/iec61360code'): ['iec61360code'], rdflib.term.URIRef('http://qudt.org/schema/qudt/symbol'): ['symbol'], rdflib.term.URIRef('https://w3id.org/linkml/symbol'): ['symbol'], rdflib.term.URIRef('http://qudt.org/schema/qudt/abbreviation'): ['abbreviation'], rdflib.term.URIRef('https://w3id.org/linkml/abbreviation'): ['abbreviation'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#label'): ['descriptive_name', 'name'], rdflib.term.URIRef('https://w3id.org/linkml/descriptive_name'): ['descriptive_name'], rdflib.term.URIRef('https://w3id.org/linkml/name'): ['name'], rdflib.term.URIRef('http://schema.org/name'): ['name'], rdflib.term.URIRef('http://purl.org/dc/terms/title'): ['title'], rdflib.term.URIRef('https://w3id.org/linkml/title'): ['title'], rdflib.term.URIRef('http://purl.org/dc/terms/conformsTo'): ['conforms_to'], rdflib.term.URIRef('https://w3id.org/linkml/conforms_to'): ['conforms_to'], rdflib.term.URIRef('https://w3id.org/linkml/implements'): ['implements', 'implements'], rdflib.term.URIRef('https://w3id.org/linkml/instantiates'): ['instantiates', 'instantiates'], rdflib.term.URIRef('http://purl.org/dc/terms/subject'): ['categories'], rdflib.term.URIRef('https://w3id.org/linkml/categories'): ['categories'], rdflib.term.URIRef('http://schema.org/keywords'): ['keywords'], rdflib.term.URIRef('https://w3id.org/linkml/keywords'): ['keywords'], rdflib.term.URIRef('https://w3id.org/linkml/definition_uri'): ['definition_uri', 'definition_uri'], rdflib.term.URIRef('https://w3id.org/linkml/id_prefixes'): ['id_prefixes', 'id_prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/id_prefixes_are_closed'): ['id_prefixes_are_closed', 'id_prefixes_are_closed'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#definition'): ['description'], rdflib.term.URIRef('https://w3id.org/linkml/description'): ['description'], rdflib.term.URIRef('http://purl.org/dc/terms/description'): ['description'], rdflib.term.URIRef('http://schema.org/description'): ['description'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#altLabel'): ['structured_aliases'], rdflib.term.URIRef('https://w3id.org/linkml/structured_aliases'): ['structured_aliases'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#altLabel'): ['aliases', 'singular_name', 'local_name_value'], rdflib.term.URIRef('https://w3id.org/linkml/aliases'): ['aliases'], rdflib.term.URIRef('http://schema.org/alternateName'): ['aliases'], rdflib.term.URIRef('https://w3id.org/linkml/deprecated'): ['deprecated', 'deprecated'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#deprecated'): ['deprecated'], rdflib.term.URIRef('https://w3id.org/linkml/todos'): ['todos', 'todos'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#editorialNote'): ['notes'], rdflib.term.URIRef('https://w3id.org/linkml/notes'): ['notes'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#note'): ['comments'], rdflib.term.URIRef('https://w3id.org/linkml/comments'): ['comments'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#inSubset'): ['in_subset'], rdflib.term.URIRef('https://w3id.org/linkml/in_subset'): ['in_subset'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#inScheme'): ['from_schema'], rdflib.term.URIRef('https://w3id.org/linkml/from_schema'): ['from_schema'], rdflib.term.URIRef('https://w3id.org/linkml/imported_from'): ['imported_from', 'imported_from'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#seeAlso'): ['see_also'], rdflib.term.URIRef('https://w3id.org/linkml/see_also'): ['see_also'], rdflib.term.URIRef('https://w3id.org/linkml/owned_by'): ['owned_by', 'owned_by'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#isDefinedBy'): ['owned_by'], rdflib.term.URIRef('http://purl.org/pav/createdBy'): ['created_by'], rdflib.term.URIRef('https://w3id.org/linkml/created_by'): ['created_by'], rdflib.term.URIRef('http://purl.org/dc/terms/contributor'): ['contributors'], rdflib.term.URIRef('https://w3id.org/linkml/contributors'): ['contributors'], rdflib.term.URIRef('http://purl.org/pav/createdOn'): ['created_on'], rdflib.term.URIRef('https://w3id.org/linkml/created_on'): ['created_on'], rdflib.term.URIRef('http://purl.org/pav/lastUpdatedOn'): ['last_updated_on'], rdflib.term.URIRef('https://w3id.org/linkml/last_updated_on'): ['last_updated_on'], rdflib.term.URIRef('http://open-services.net/ns/core#modifiedBy'): ['modified_by'], rdflib.term.URIRef('https://w3id.org/linkml/modified_by'): ['modified_by'], rdflib.term.URIRef('http://purl.org/ontology/bibo/status'): ['status'], rdflib.term.URIRef('https://w3id.org/linkml/status'): ['status'], rdflib.term.URIRef('http://www.w3.org/2008/05/skos-xl#literalForm'): ['literal_form'], rdflib.term.URIRef('https://w3id.org/linkml/literal_form'): ['literal_form'], rdflib.term.URIRef('http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate'): ['alias_predicate'], rdflib.term.URIRef('https://w3id.org/linkml/alias_predicate'): ['alias_predicate'], rdflib.term.URIRef('https://w3id.org/linkml/alias_contexts'): ['alias_contexts', 'alias_contexts'], rdflib.term.URIRef('http://schema.org/inLanguage'): ['in_language'], rdflib.term.URIRef('https://w3id.org/linkml/in_language'): ['in_language'], rdflib.term.URIRef('http://purl.org/dc/terms/source'): ['source'], rdflib.term.URIRef('https://w3id.org/linkml/source'): ['source'], rdflib.term.URIRef('http://www.w3.org/ns/prov#wasDerivedFrom'): ['source'], rdflib.term.URIRef('http://schema.org/isBasedOn'): ['source'], rdflib.term.URIRef('http://purl.org/dc/terms/publisher'): ['publisher'], rdflib.term.URIRef('https://w3id.org/linkml/publisher'): ['publisher'], rdflib.term.URIRef('https://w3id.org/linkml/is_a'): ['is_a', 'is_a'], rdflib.term.URIRef('https://w3id.org/linkml/abstract'): ['abstract', 'abstract'], rdflib.term.URIRef('https://w3id.org/linkml/mixin'): ['mixin', 'mixin'], rdflib.term.URIRef('https://w3id.org/linkml/mixins'): ['mixins', 'mixins'], rdflib.term.URIRef('https://w3id.org/linkml/apply_to'): ['apply_to', 'apply_to'], rdflib.term.URIRef('https://w3id.org/linkml/values_from'): ['values_from', 'values_from'], rdflib.term.URIRef('https://w3id.org/linkml/code_set'): ['code_set', 'code_set'], rdflib.term.URIRef('https://w3id.org/linkml/code_set_version'): ['code_set_version', 'code_set_version'], rdflib.term.URIRef('https://w3id.org/linkml/code_set_tag'): ['code_set_tag', 'code_set_tag'], rdflib.term.URIRef('https://w3id.org/linkml/pv_formula'): ['pv_formula', 'pv_formula'], rdflib.term.URIRef('https://w3id.org/linkml/permissible_values'): ['permissible_values', 'permissible_values'], rdflib.term.URIRef('http://rdf.cdisc.org/mms#PermissibleValue'): ['permissible_values'], rdflib.term.URIRef('https://w3id.org/linkml/enum_uri'): ['enum_uri', 'enum_uri'], rdflib.term.URIRef('https://w3id.org/linkml/include'): ['include', 'include'], rdflib.term.URIRef('https://w3id.org/linkml/minus'): ['minus', 'minus'], rdflib.term.URIRef('https://w3id.org/linkml/inherits'): ['inherits', 'inherits'], rdflib.term.URIRef('https://w3id.org/linkml/matches'): ['matches', 'matches'], rdflib.term.URIRef('https://w3id.org/linkml/identifier_pattern'): ['identifier_pattern', 'identifier_pattern'], rdflib.term.URIRef('https://w3id.org/linkml/concepts'): ['concepts', 'concepts'], rdflib.term.URIRef('https://w3id.org/linkml/reachable_from'): ['reachable_from', 'reachable_from'], rdflib.term.URIRef('https://w3id.org/linkml/source_ontology'): ['source_ontology', 'source_ontology'], rdflib.term.URIRef('https://w3id.org/linkml/is_direct'): ['is_direct', 'is_direct'], rdflib.term.URIRef('https://w3id.org/linkml/traverse_up'): ['traverse_up', 'traverse_up'], rdflib.term.URIRef('https://w3id.org/linkml/include_self'): ['include_self', 'include_self'], rdflib.term.URIRef('https://w3id.org/linkml/relationship_types'): ['relationship_types', 'relationship_types'], rdflib.term.URIRef('https://w3id.org/linkml/source_nodes'): ['source_nodes', 'source_nodes'], rdflib.term.URIRef('https://w3id.org/linkml/text'): ['text', 'text'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#notation'): ['text'], rdflib.term.URIRef('https://w3id.org/linkml/meaning'): ['meaning', 'meaning'], rdflib.term.URIRef('https://w3id.org/linkml/id'): ['id', 'id'], rdflib.term.URIRef('https://w3id.org/linkml/emit_prefixes'): ['emit_prefixes', 'emit_prefixes'], rdflib.term.URIRef('http://purl.org/pav/version'): ['version'], rdflib.term.URIRef('https://w3id.org/linkml/version'): ['version'], rdflib.term.URIRef('http://schema.org/schemaVersion'): ['version'], rdflib.term.URIRef('https://w3id.org/linkml/imports'): ['imports', 'imports'], rdflib.term.URIRef('https://w3id.org/linkml/structured_imports'): ['structured_imports', 'structured_imports'], rdflib.term.URIRef('http://purl.org/dc/terms/license'): ['license'], rdflib.term.URIRef('https://w3id.org/linkml/license'): ['license'], rdflib.term.URIRef('https://w3id.org/linkml/default_curi_maps'): ['default_curi_maps', 'default_curi_maps'], rdflib.term.URIRef('https://w3id.org/linkml/default_prefix'): ['default_prefix', 'default_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/default_range'): ['default_range', 'default_range'], rdflib.term.URIRef('https://w3id.org/linkml/subsets'): ['subsets', 'subsets'], rdflib.term.URIRef('http://www.geneontology.org/formats/oboInOwl#hasSubset'): ['subsets'], rdflib.term.URIRef('https://w3id.org/linkml/types'): ['types', 'types'], rdflib.term.URIRef('https://w3id.org/linkml/enums'): ['enums', 'enums'], rdflib.term.URIRef('https://w3id.org/linkml/slot_definitions'): ['slot_definitions', 'slot_definitions'], rdflib.term.URIRef('https://w3id.org/linkml/classes'): ['classes', 'classes'], rdflib.term.URIRef('https://w3id.org/linkml/metamodel_version'): ['metamodel_version', 'metamodel_version'], rdflib.term.URIRef('https://w3id.org/linkml/source_file'): ['source_file', 'source_file'], rdflib.term.URIRef('https://w3id.org/linkml/source_file_date'): ['source_file_date', 'source_file_date'], rdflib.term.URIRef('https://w3id.org/linkml/source_file_size'): ['source_file_size', 'source_file_size'], rdflib.term.URIRef('https://w3id.org/linkml/generation_date'): ['generation_date', 'generation_date'], rdflib.term.URIRef('https://w3id.org/linkml/slots'): ['slots', 'slots'], rdflib.term.URIRef('https://w3id.org/linkml/slot_usage'): ['slot_usage', 'slot_usage'], rdflib.term.URIRef('https://w3id.org/linkml/enum_range'): ['enum_range', 'enum_range'], rdflib.term.URIRef('https://w3id.org/linkml/range_expression'): ['range_expression', 'range_expression'], rdflib.term.URIRef('https://w3id.org/linkml/boolean_slot'): ['boolean_slot', 'boolean_slot'], rdflib.term.URIRef('https://w3id.org/linkml/any_of'): ['any_of', 'any_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#or'): ['any_of'], rdflib.term.URIRef('https://w3id.org/linkml/exactly_one_of'): ['exactly_one_of', 'exactly_one_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#xone'): ['exactly_one_of'], rdflib.term.URIRef('https://w3id.org/linkml/none_of'): ['none_of', 'none_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#not'): ['none_of'], rdflib.term.URIRef('https://w3id.org/linkml/all_of'): ['all_of', 'all_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#and'): ['all_of'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#condition'): ['preconditions'], rdflib.term.URIRef('https://w3id.org/linkml/preconditions'): ['preconditions'], rdflib.term.URIRef('http://www.w3.org/2003/11/swrl#body'): ['preconditions', 'postconditions'], rdflib.term.URIRef('https://w3id.org/linkml/postconditions'): ['postconditions', 'postconditions'], rdflib.term.URIRef('https://w3id.org/linkml/elseconditions'): ['elseconditions', 'elseconditions'], rdflib.term.URIRef('https://w3id.org/linkml/bidirectional'): ['bidirectional', 'bidirectional'], rdflib.term.URIRef('https://w3id.org/linkml/open_world'): ['open_world', 'open_world'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#order'): ['rank'], rdflib.term.URIRef('https://w3id.org/linkml/rank'): ['rank'], rdflib.term.URIRef('http://qudt.org/schema/qudt/order'): ['rank'], rdflib.term.URIRef('http://purl.org/linked-data/cube#order'): ['rank'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#deactivated'): ['deactivated'], rdflib.term.URIRef('https://w3id.org/linkml/deactivated'): ['deactivated'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#rule'): ['rules'], rdflib.term.URIRef('https://w3id.org/linkml/rules'): ['rules'], rdflib.term.URIRef('https://w3id.org/linkml/classification_rules'): ['classification_rules', 'classification_rules'], rdflib.term.URIRef('https://w3id.org/linkml/slot_conditions'): ['slot_conditions', 'slot_conditions'], rdflib.term.URIRef('https://w3id.org/linkml/attributes'): ['attributes', 'attributes'], rdflib.term.URIRef('https://w3id.org/linkml/class_uri'): ['class_uri', 'class_uri'], rdflib.term.URIRef('https://w3id.org/linkml/subclass_of'): ['subclass_of', 'subclass_of'], rdflib.term.URIRef('https://w3id.org/linkml/defining_slots'): ['defining_slots', 'defining_slots'], rdflib.term.URIRef('https://w3id.org/linkml/union_of'): ['union_of', 'union_of'], rdflib.term.URIRef('https://w3id.org/linkml/tree_root'): ['tree_root', 'tree_root'], rdflib.term.URIRef('https://w3id.org/linkml/unique_keys'): ['unique_keys', 'unique_keys'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#hasKey'): ['unique_keys'], rdflib.term.URIRef('https://w3id.org/linkml/unique_key_name'): ['unique_key_name', 'unique_key_name'], rdflib.term.URIRef('https://w3id.org/linkml/consider_nulls_inequal'): ['consider_nulls_inequal', 'consider_nulls_inequal'], rdflib.term.URIRef('https://w3id.org/linkml/unique_key_slots'): ['unique_key_slots', 'unique_key_slots'], rdflib.term.URIRef('https://w3id.org/linkml/slot_names_unique'): ['slot_names_unique', 'slot_names_unique'], rdflib.term.URIRef('https://w3id.org/linkml/domain'): ['domain', 'domain'], rdflib.term.URIRef('https://w3id.org/linkml/range'): ['range', 'range'], rdflib.term.URIRef('https://w3id.org/linkml/slot_uri'): ['slot_uri', 'slot_uri'], rdflib.term.URIRef('https://w3id.org/linkml/multivalued'): ['multivalued', 'multivalued'], rdflib.term.URIRef('https://w3id.org/linkml/array'): ['array', 'array'], rdflib.term.URIRef('https://w3id.org/linkml/dimensions'): ['dimensions', 'dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_number_dimensions'): ['minimum_number_dimensions', 'minimum_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_number_dimensions'): ['maximum_number_dimensions', 'maximum_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/exact_number_dimensions'): ['exact_number_dimensions', 'exact_number_dimensions'], rdflib.term.URIRef('https://w3id.org/linkml/inherited'): ['inherited', 'inherited'], rdflib.term.URIRef('https://w3id.org/linkml/readonly'): ['readonly', 'readonly'], rdflib.term.URIRef('https://w3id.org/linkml/ifabsent'): ['ifabsent', 'ifabsent'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#defaultValue'): ['ifabsent'], rdflib.term.URIRef('https://w3id.org/linkml/implicit_prefix'): ['implicit_prefix', 'implicit_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/value_specification_constant'): ['value_specification_constant', 'value_specification_constant'], rdflib.term.URIRef('https://w3id.org/linkml/list_value_specification_constant'): ['list_value_specification_constant', 'list_value_specification_constant'], rdflib.term.URIRef('https://w3id.org/linkml/value_presence'): ['value_presence', 'value_presence'], rdflib.term.URIRef('https://w3id.org/linkml/equals_string'): ['equals_string', 'equals_string'], rdflib.term.URIRef('https://w3id.org/linkml/equals_number'): ['equals_number', 'equals_number'], rdflib.term.URIRef('https://w3id.org/linkml/equals_expression'): ['equals_expression', 'equals_expression'], rdflib.term.URIRef('https://w3id.org/linkml/exact_cardinality'): ['exact_cardinality', 'exact_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_cardinality'): ['minimum_cardinality', 'minimum_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_cardinality'): ['maximum_cardinality', 'maximum_cardinality'], rdflib.term.URIRef('https://w3id.org/linkml/equals_string_in'): ['equals_string_in', 'equals_string_in'], rdflib.term.URIRef('https://w3id.org/linkml/equals_number_in'): ['equals_number_in', 'equals_number_in'], rdflib.term.URIRef('https://w3id.org/linkml/has_member'): ['has_member', 'has_member'], rdflib.term.URIRef('https://w3id.org/linkml/all_members'): ['all_members', 'all_members'], rdflib.term.URIRef('https://w3id.org/linkml/singular_name'): ['singular_name', 'singular_name'], rdflib.term.URIRef('https://w3id.org/linkml/required'): ['required', 'required'], rdflib.term.URIRef('https://w3id.org/linkml/recommended'): ['recommended', 'recommended'], rdflib.term.URIRef('https://w3id.org/linkml/inapplicable'): ['inapplicable', 'inapplicable'], rdflib.term.URIRef('https://w3id.org/linkml/inlined'): ['inlined', 'inlined'], rdflib.term.URIRef('https://w3id.org/linkml/inlined_as_list'): ['inlined_as_list', 'inlined_as_list'], rdflib.term.URIRef('https://w3id.org/linkml/inlined_as_simple_dict'): ['inlined_as_simple_dict', 'inlined_as_simple_dict'], rdflib.term.URIRef('https://w3id.org/linkml/list_elements_ordered'): ['list_elements_ordered', 'list_elements_ordered'], rdflib.term.URIRef('https://w3id.org/linkml/list_elements_unique'): ['list_elements_unique', 'list_elements_unique'], rdflib.term.URIRef('https://w3id.org/linkml/shared'): ['shared', 'shared'], rdflib.term.URIRef('https://w3id.org/linkml/key'): ['key', 'key'], rdflib.term.URIRef('https://w3id.org/linkml/identifier'): ['identifier', 'identifier'], rdflib.term.URIRef('https://w3id.org/linkml/designates_type'): ['designates_type', 'designates_type'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#prefLabel'): ['alias'], rdflib.term.URIRef('https://w3id.org/linkml/alias'): ['alias'], rdflib.term.URIRef('https://w3id.org/linkml/owner'): ['owner', 'owner'], rdflib.term.URIRef('https://w3id.org/linkml/domain_of'): ['domain_of', 'domain_of'], rdflib.term.URIRef('http://semanticscience.org/resource/SIO_000011'): ['domain_of'], rdflib.term.URIRef('https://w3id.org/linkml/is_usage_slot'): ['is_usage_slot', 'is_usage_slot'], rdflib.term.URIRef('https://w3id.org/linkml/usage_slot_name'): ['usage_slot_name', 'usage_slot_name'], rdflib.term.URIRef('http://www.w3.org/2000/01/rdf-schema#subPropertyOf'): ['subproperty_of'], rdflib.term.URIRef('https://w3id.org/linkml/subproperty_of'): ['subproperty_of'], rdflib.term.URIRef('https://w3id.org/linkml/disjoint_with'): ['disjoint_with', 'disjoint_with'], rdflib.term.URIRef('https://w3id.org/linkml/children_are_mutually_disjoint'): ['children_are_mutually_disjoint', 'children_are_mutually_disjoint'], rdflib.term.URIRef('https://w3id.org/linkml/relational_logical_characteristic'): ['relational_logical_characteristic', 'relational_logical_characteristic'], rdflib.term.URIRef('https://w3id.org/linkml/symmetric'): ['symmetric', 'symmetric'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#SymmetricProperty'): ['symmetric'], rdflib.term.URIRef('https://w3id.org/linkml/asymmetric'): ['asymmetric', 'asymmetric'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#AsymmetricProperty'): ['asymmetric'], rdflib.term.URIRef('https://w3id.org/linkml/reflexive'): ['reflexive', 'reflexive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#ReflexiveProperty'): ['reflexive'], rdflib.term.URIRef('https://w3id.org/linkml/irreflexive'): ['irreflexive', 'irreflexive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#IrreflexiveProperty'): ['irreflexive'], rdflib.term.URIRef('https://w3id.org/linkml/locally_reflexive'): ['locally_reflexive', 'locally_reflexive'], rdflib.term.URIRef('https://w3id.org/linkml/transitive'): ['transitive', 'transitive'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#TransitiveProperty'): ['transitive'], rdflib.term.URIRef('https://w3id.org/linkml/transitive_form_of'): ['transitive_form_of', 'transitive_form_of'], rdflib.term.URIRef('https://w3id.org/linkml/reflexive_transitive_form_of'): ['reflexive_transitive_form_of', 'reflexive_transitive_form_of'], rdflib.term.URIRef('http://www.w3.org/2002/07/owl#inverseOf'): ['inverse'], rdflib.term.URIRef('https://w3id.org/linkml/inverse'): ['inverse'], rdflib.term.URIRef('https://w3id.org/linkml/is_class_field'): ['is_class_field', 'is_class_field'], rdflib.term.URIRef('https://w3id.org/linkml/role'): ['role', 'role'], rdflib.term.URIRef('https://w3id.org/linkml/minimum_value'): ['minimum_value', 'minimum_value'], rdflib.term.URIRef('https://w3id.org/linkml/maximum_value'): ['maximum_value', 'maximum_value'], rdflib.term.URIRef('https://w3id.org/linkml/interpolated'): ['interpolated', 'interpolated'], rdflib.term.URIRef('https://w3id.org/linkml/partial_match'): ['partial_match', 'partial_match'], rdflib.term.URIRef('https://w3id.org/linkml/pattern'): ['pattern', 'pattern'], rdflib.term.URIRef('https://w3id.org/linkml/syntax'): ['syntax', 'syntax'], rdflib.term.URIRef('https://w3id.org/linkml/structured_pattern'): ['structured_pattern', 'structured_pattern'], rdflib.term.URIRef('https://w3id.org/linkml/string_serialization'): ['string_serialization', 'string_serialization'], rdflib.term.URIRef('https://w3id.org/linkml/bindings'): ['bindings', 'bindings'], rdflib.term.URIRef('https://w3id.org/linkml/binds_value_of'): ['binds_value_of', 'binds_value_of'], rdflib.term.URIRef('https://w3id.org/linkml/obligation_level'): ['obligation_level', 'obligation_level'], rdflib.term.URIRef('https://w3id.org/linkml/type_mappings'): ['type_mappings', 'type_mappings'], rdflib.term.URIRef('https://w3id.org/linkml/framework_key'): ['framework_key', 'framework_key'], rdflib.term.URIRef('https://w3id.org/linkml/mapped_type'): ['mapped_type', 'mapped_type'], rdflib.term.URIRef('https://w3id.org/linkml/typeof'): ['typeof', 'typeof'], rdflib.term.URIRef('https://w3id.org/linkml/base'): ['base', 'base'], rdflib.term.URIRef('https://w3id.org/linkml/type_uri'): ['type_uri', 'type_uri'], rdflib.term.URIRef('https://w3id.org/linkml/repr'): ['repr', 'repr'], rdflib.term.URIRef('https://w3id.org/linkml/alt_description_text'): ['alt_description_text', 'alt_description_text'], rdflib.term.URIRef('https://w3id.org/linkml/alt_description_source'): ['alt_description_source', 'alt_description_source'], rdflib.term.URIRef('https://w3id.org/linkml/alt_descriptions'): ['alt_descriptions', 'alt_descriptions'], rdflib.term.URIRef('http://www.w3.org/2004/02/skos/core#example'): ['value'], rdflib.term.URIRef('https://w3id.org/linkml/value'): ['value'], rdflib.term.URIRef('https://w3id.org/linkml/value_description'): ['value_description', 'value_description'], rdflib.term.URIRef('https://w3id.org/linkml/value_object'): ['value_object', 'value_object'], rdflib.term.URIRef('https://w3id.org/linkml/examples'): ['examples', 'examples'], rdflib.term.URIRef('https://vocab.org/vann/example'): ['examples'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#prefix'): ['prefix_prefix'], rdflib.term.URIRef('https://w3id.org/linkml/prefix_prefix'): ['prefix_prefix'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#namespace'): ['prefix_reference'], rdflib.term.URIRef('https://w3id.org/linkml/prefix_reference'): ['prefix_reference'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#declare'): ['prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/prefixes'): ['prefixes'], rdflib.term.URIRef('https://w3id.org/linkml/setting_key'): ['setting_key', 'setting_key'], rdflib.term.URIRef('https://w3id.org/linkml/setting_value'): ['setting_value', 'setting_value'], rdflib.term.URIRef('https://w3id.org/linkml/settings'): ['settings', 'settings'], rdflib.term.URIRef('https://w3id.org/linkml/import_from'): ['import_from', 'import_from'], rdflib.term.URIRef('https://w3id.org/linkml/import_as'): ['import_as', 'import_as'], rdflib.term.URIRef('https://w3id.org/linkml/import_map'): ['import_map', 'import_map'], rdflib.term.URIRef('https://w3id.org/linkml/local_name_source'): ['local_name_source', 'local_name_source'], rdflib.term.URIRef('https://w3id.org/linkml/local_name_value'): ['local_name_value'], rdflib.term.URIRef('https://w3id.org/linkml/local_names'): ['local_names', 'local_names'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#group'): ['slot_group'], rdflib.term.URIRef('https://w3id.org/linkml/slot_group'): ['slot_group'], rdflib.term.URIRef('https://w3id.org/linkml/is_grouping_slot'): ['is_grouping_slot', 'is_grouping_slot'], rdflib.term.URIRef('http://www.w3.org/ns/shacl#PropertyGroup'): ['is_grouping_slot'], rdflib.term.URIRef('https://w3id.org/linkml/followed_by'): ['followed_by', 'followed_by'], rdflib.term.URIRef('https://w3id.org/linkml/reversed'): ['reversed', 'reversed'], rdflib.term.URIRef('https://w3id.org/linkml/traverse'): ['traverse', 'traverse'], rdflib.term.URIRef('https://w3id.org/linkml/path_rule'): ['path_rule', 'path_rule'], rdflib.term.URIRef('https://w3id.org/linkml/represents_relationship'): ['represents_relationship', 'represents_relationship'], rdflib.term.URIRef('https://w3id.org/linkml/relational_role'): ['relational_role', 'relational_role'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#string'): ['string', 'curie', 'ncname', 'jsonpointer', 'jsonpath', 'sparqlpath'], rdflib.term.URIRef('https://w3id.org/linkml/string'): ['string'], rdflib.term.URIRef('http://schema.org/Text'): ['string'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#integer'): ['integer'], rdflib.term.URIRef('https://w3id.org/linkml/integer'): ['integer'], rdflib.term.URIRef('http://schema.org/Integer'): ['integer'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#boolean'): ['boolean'], rdflib.term.URIRef('https://w3id.org/linkml/boolean'): ['boolean'], rdflib.term.URIRef('http://schema.org/Boolean'): ['boolean'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#float'): ['float'], rdflib.term.URIRef('https://w3id.org/linkml/float'): ['float'], rdflib.term.URIRef('http://schema.org/Float'): ['float', 'double'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#double'): ['double'], rdflib.term.URIRef('https://w3id.org/linkml/double'): ['double'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#decimal'): ['decimal'], rdflib.term.URIRef('https://w3id.org/linkml/decimal'): ['decimal'], rdflib.term.URIRef('http://schema.org/Number'): ['decimal'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#time'): ['time'], rdflib.term.URIRef('https://w3id.org/linkml/time'): ['time'], rdflib.term.URIRef('http://schema.org/Time'): ['time'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#date'): ['date'], rdflib.term.URIRef('https://w3id.org/linkml/date'): ['date'], rdflib.term.URIRef('http://schema.org/Date'): ['date'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#dateTime'): ['datetime'], rdflib.term.URIRef('https://w3id.org/linkml/datetime'): ['datetime'], rdflib.term.URIRef('http://schema.org/DateTime'): ['datetime'], rdflib.term.URIRef('https://w3id.org/linkml/DateOrDatetime'): ['date_or_datetime'], rdflib.term.URIRef('https://w3id.org/linkml/date_or_datetime'): ['date_or_datetime'], rdflib.term.URIRef('http://www.w3.org/2001/XMLSchema#anyURI'): ['uriorcurie', 'uri'], rdflib.term.URIRef('https://w3id.org/linkml/uriorcurie'): ['uriorcurie'], rdflib.term.URIRef('https://w3id.org/linkml/curie'): ['curie'], rdflib.term.URIRef('https://w3id.org/linkml/uri'): ['uri'], rdflib.term.URIRef('http://schema.org/URL'): ['uri'], rdflib.term.URIRef('https://w3id.org/linkml/ncname'): ['ncname'], rdflib.term.URIRef('http://www.w3.org/ns/shex#iri'): ['objectidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/objectidentifier'): ['objectidentifier'], rdflib.term.URIRef('http://www.w3.org/ns/shex#nonLiteral'): ['nodeidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/nodeidentifier'): ['nodeidentifier'], rdflib.term.URIRef('https://w3id.org/linkml/jsonpointer'): ['jsonpointer'], rdflib.term.URIRef('https://w3id.org/linkml/jsonpath'): ['jsonpath'], rdflib.term.URIRef('https://w3id.org/linkml/sparqlpath'): ['sparqlpath']}), classdef_slots={'modified_by', 'none_of', 'name', 'rules', 'represents_relationship', 'source', 'slots', 'annotations', 'structured_aliases', 'slot_names_unique', 'tree_root', 'classification_rules', 'slot_conditions', 'id_prefixes_are_closed', 'created_on', 'in_language', 'is_a', 'related mappings', 'status', 'from_schema', 'in_subset', 'children_are_mutually_disjoint', 'todos', 'conforms_to', 'alt_descriptions', 'attributes', 'deprecated element has possible replacement', 'exactly_one_of', 'narrow mappings', 'local_names', 'string_serialization', 'imported_from', 'instantiates', 'apply_to', 'class_uri', 'description', 'values_from', 'deprecated', 'comments', 'subclass_of', 'any_of', 'mixins', 'disjoint_with', 'slot_usage', 'union_of', 'defining_slots', 'unique_keys', 'notes', 'created_by', 'keywords', 'last_updated_on', 'close mappings', 'abstract', 'categories', 'mappings', 'exact mappings', 'deprecated element has exact replacement', 'all_of', 'aliases', 'mixin', 'contributors', 'id_prefixes', 'definition_uri', 'examples', 'title', 'implements', 'extensions', 'broad mappings', 'see_also', 'rank'}, slotdef_slots={'range_expression', 'source', 'enum_range', 'reflexive', 'is_grouping_slot', 'from_schema', 'in_subset', 'multivalued', 'transitive_form_of', 'recommended', 'deprecated element has possible replacement', 'local_names', 'instantiates', 'unit', 'array', 'values_from', 'equals_string_in', 'mixins', 'notes', 'pattern', 'slot_group', 'usage_slot_name', 'all_members', 'definition_uri', 'implicit_prefix', 'identifier', 'has_member', 'created_on', 'readonly', 'in_language', 'is_a', 'bindings', 'asymmetric', 'maximum_cardinality', 'string_serialization', 'apply_to', 'path_rule', 'domain', 'ifabsent', 'any_of', 'reflexive_transitive_form_of', 'disjoint_with', 'relational_role', 'union_of', 'created_by', 'keywords', 'list_elements_unique', 'deprecated element has exact replacement', 'all_of', 'implements', 'extensions', 'mappings', 'role', 'rank', 'none_of', 'list_elements_ordered', 'inlined_as_list', 'owner', 'structured_aliases', 'inverse', 'structured_pattern', 'minimum_value', 'status', 'designates_type', 'type_mappings', 'equals_expression', 'is_usage_slot', 'children_are_mutually_disjoint', 'irreflexive', 'alt_descriptions', 'imported_from', 'domain_of', 'description', 'alias', 'locally_reflexive', 'range', 'singular_name', 'shared', 'close mappings', 'abstract', 'categories', 'inlined', 'mixin', 'examples', 'inherited', 'symmetric', 'broad mappings', 'slot_uri', 'see_also', 'equals_number', 'required', 'modified_by', 'name', 'annotations', 'id_prefixes_are_closed', 'related mappings', 'equals_string', 'transitive', 'maximum_value', 'todos', 'conforms_to', 'exactly_one_of', 'narrow mappings', 'value_presence', 'deprecated', 'comments', 'last_updated_on', 'exact mappings', 'aliases', 'is_class_field', 'contributors', 'id_prefixes', 'title', 'minimum_cardinality', 'key', 'subproperty_of', 'exact_cardinality'}, seen_prefixes=set(), prefix_counts=Counter())' - -.venv/lib/python3.9/site-packages/rdflib/parser.py:383: Exception -=============================== warnings summary =============================== -.venv/lib/python3.9/site-packages/pysolr.py:14 - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pysolr.py:14: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html - from pkg_resources import DistributionNotFound, get_distribution, parse_version - -.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144 -.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144 - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pkg_resources/__init__.py:3144: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('sphinxcontrib')`. - Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages - declare_namespace(pkg) - -.venv/lib/python3.9/site-packages/quantulum3/classifier.py:28 - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/quantulum3/classifier.py:28: UserWarning: Classifier dependencies not installed. Run pip install quantulum3[classifier] to install them. The classifer helps to dissambiguate units. - warnings.warn( - -.venv/lib/python3.9/site-packages/pydantic/main.py:1132: 1771 warnings - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pydantic/main.py:1132: PydanticDeprecatedSince20: The `parse_obj` method is deprecated; use `model_validate` instead. Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.8/migration/ - warnings.warn( - -.venv/lib/python3.9/site-packages/pydantic/main.py:1087: 7084 warnings - /home/corey/Code/schema-automator/.venv/lib/python3.9/site-packages/pydantic/main.py:1087: PydanticDeprecatedSince20: The `dict` method is deprecated; use `model_dump` instead. Deprecated in Pydantic V2.0 to be removed in V3.0. See Pydantic V2 Migration Guide at https://errors.pydantic.dev/2.8/migration/ - warnings.warn('The `dict` method is deprecated; use `model_dump` instead.', category=PydanticDeprecatedSince20) - -tests/test_annotators/test_schema_enricher.py::SchemaEnricherTestCase::test_enrich - /home/corey/Code/schema-automator/tests/test_annotators/test_schema_enricher.py:26: DeprecatedWarning: get_implementation_from_shorthand is deprecated as of Use get_adapter instead. - impl = get_implementation_from_shorthand(os.path.join(INPUT_DIR, "so-mini.obo")) - -tests/test_generalizers/test_from_robot_template.py::TestRobotTemplateImport::test_from_robot_template - /home/corey/Code/schema-automator/tests/test_generalizers/test_from_robot_template.py:30: DeprecationWarning: Call to deprecated method all_class. (Use `all_classes` instead) - for cn, c in sv.all_class().items(): - -tests/test_importers/test_dosdp_importer.py::TestDOSDPImporter::test_dosdp_import - /home/corey/Code/schema-automator/tests/test_importers/test_dosdp_importer.py:43: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) - sd = minify_schema(schema) - -tests/test_importers/test_dosdp_importer.py: 1667 warnings - /home/corey/Code/schema-automator/schema_automator/utils/schemautils.py:44: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) - minify_schema(v) - -tests/test_importers/test_dosdp_importer.py: 503 warnings - /home/corey/Code/schema-automator/schema_automator/utils/schemautils.py:47: DeprecationWarning: Call to deprecated function (or staticmethod) minify_schema. (Replaced by linkml.runtime.utils.schema_as_dict) - minify_schema(v) - --- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -=========================== short test summary info ============================ -FAILED tests/test_importers/test_rdfs_importer.py::test_infer_prefix - Except... -=========== 1 failed, 37 passed, 6 skipped, 11032 warnings in 26.42s =========== From f97fa573da838de68bdc22cf2d31a364fa9aa3b8 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 13:44:52 -0500 Subject: [PATCH 72/88] Just test 3.9 until this is working --- .github/workflows/check-pull-request.yaml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index cfb3561..ea1f6d8 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -17,7 +17,8 @@ jobs: fail-fast: false matrix: os: [ ubuntu-latest, windows-latest ] - python-version: [ "3.9", "3.10", "3.11", "3.12" , "3.13" ] + # python-version: [ "3.9", "3.10", "3.11", "3.12" , "3.13" ] + python-version: [ "3.9" ] # exclude: # - os: windows-latest # python-version: "3.9" From ae2f2eaf6c9f7e23b716f6bb5314a5a5ac3918a1 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 13:51:57 -0500 Subject: [PATCH 73/88] Should have done 3.10 --- .github/workflows/check-pull-request.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index ea1f6d8..44e5af6 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -18,7 +18,7 @@ jobs: matrix: os: [ ubuntu-latest, windows-latest ] # python-version: [ "3.9", "3.10", "3.11", "3.12" , "3.13" ] - python-version: [ "3.9" ] + python-version: [ "3.10" ] # exclude: # - os: windows-latest # python-version: "3.9" From 6c51471e65dba4f19ff01565f0800acba9f9cb23 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 14:01:02 -0500 Subject: [PATCH 74/88] Try updating linkml-runtime --- poetry.lock | 378 ++++++++++------------------------------------------ 1 file changed, 70 insertions(+), 308 deletions(-) diff --git a/poetry.lock b/poetry.lock index 970059d..f050438 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 2.0.1 and should not be changed by hand. +# This file is automatically @generated by Poetry 2.1.3 and should not be changed by hand. [[package]] name = "airium" @@ -7,7 +7,6 @@ description = "Easy and quick html builder with natural syntax correspondence (p optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "airium-0.2.6-py3-none-any.whl", hash = "sha256:50af5cf491e084f27909e29a93550b4170e587cde01334d58c6249644ee8c6c2"}, {file = "airium-0.2.6.tar.gz", hash = "sha256:ccab36b798b6cce3d0c5074e52ce8059f6e82991caae4985f42cadfad80b1de4"}, @@ -24,7 +23,6 @@ description = "A light, configurable Sphinx theme" optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "alabaster-0.7.16-py3-none-any.whl", hash = "sha256:b46733c07dce03ae4e150330b975c75737fa60f0a7c591b6c8bf4928a28e2c92"}, {file = "alabaster-0.7.16.tar.gz", hash = "sha256:75a8b99c28a5dad50dd7f8ccdd447a121ddb3892da9e53d1ca5cca3106d58d65"}, @@ -37,7 +35,6 @@ description = "Reusable constraint types to use with typing.Annotated" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "annotated_types-0.7.0-py3-none-any.whl", hash = "sha256:1f02e8b43a8fbbc3f3e0d4f0f4bfc8131bcb4eebe8849b8e5c773f3a1c582a53"}, {file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"}, @@ -50,7 +47,6 @@ description = "ANTLR 4.9.3 runtime for Python 3.7" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "antlr4-python3-runtime-4.9.3.tar.gz", hash = "sha256:f224469b4168294902bb1efa80a8bf7855f24c99aef99cbefc1bcd3cce77881b"}, ] @@ -66,7 +62,7 @@ files = [ {file = "anyio-4.8.0-py3-none-any.whl", hash = "sha256:b5011f270ab5eb0abf13385f851315585cc37ef330dd88e27ec3d34d651fd47a"}, {file = "anyio-4.8.0.tar.gz", hash = "sha256:1d9fe889df5212298c0c0723fa20479d1b94883a2df44bd3897aa91083316f7a"}, ] -markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} +markers = {main = "extra == \"llm\""} [package.dependencies] exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""} @@ -76,7 +72,7 @@ typing_extensions = {version = ">=4.5", markers = "python_version < \"3.13\""} [package.extras] doc = ["Sphinx (>=7.4,<8.0)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx_rtd_theme"] -test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "trustme", "truststore (>=0.9.1)", "uvloop (>=0.21)"] +test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "trustme", "truststore (>=0.9.1) ; python_version >= \"3.10\"", "uvloop (>=0.21) ; platform_python_implementation == \"CPython\" and platform_system != \"Windows\" and python_version < \"3.14\""] trio = ["trio (>=0.26.1)"] [[package]] @@ -86,7 +82,6 @@ description = "A small Python module for determining appropriate platform-specif optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"}, {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"}, @@ -99,7 +94,7 @@ description = "Disable App Nap on macOS >= 10.9" optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and platform_system == \"Darwin\"" +markers = "platform_system == \"Darwin\"" files = [ {file = "appnope-0.1.4-py2.py3-none-any.whl", hash = "sha256:502575ee11cd7a28c0205f379b525beefebab9d161b7c964670864014ed7213c"}, {file = "appnope-0.1.4.tar.gz", hash = "sha256:1de3860566df9caf38f01f86f65e0e13e379af54f9e4bee1e66b48f2efffd1ee"}, @@ -112,7 +107,6 @@ description = "Argon2 for Python" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "argon2_cffi-23.1.0-py3-none-any.whl", hash = "sha256:c670642b78ba29641818ab2e68bd4e6a78ba53b7eff7b4c3815ae16abf91c7ea"}, {file = "argon2_cffi-23.1.0.tar.gz", hash = "sha256:879c3e79a2729ce768ebb7d36d4609e3a78a4ca2ec3a9f12286ca057e3d0db08"}, @@ -134,7 +128,6 @@ description = "Low-level CFFI bindings for Argon2" optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "argon2-cffi-bindings-21.2.0.tar.gz", hash = "sha256:bb89ceffa6c791807d1305ceb77dbfacc5aa499891d2c55661c6459651fc39e3"}, {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-macosx_10_9_x86_64.whl", hash = "sha256:ccb949252cb2ab3a08c02024acb77cfb179492d5701c7cbdbfd776124d4d2367"}, @@ -173,7 +166,6 @@ description = "Better dates & times for Python" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "arrow-1.3.0-py3-none-any.whl", hash = "sha256:c728b120ebc00eb84e01882a6f5e7927a53960aa990ce7dd2b10f39005a67f80"}, {file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"}, @@ -194,7 +186,6 @@ description = "Annotate AST trees with source code positions" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "asttokens-3.0.0-py3-none-any.whl", hash = "sha256:e3078351a059199dd5138cb1c706e6430c05eff2ff136af5eb4790f9d28932e2"}, {file = "asttokens-3.0.0.tar.gz", hash = "sha256:0dcd8baa8d62b0c1d118b399b2ddba3c4aff271d0d7a9e0d4c1681c79035bbc7"}, @@ -211,7 +202,6 @@ description = "Simple LRU cache for asyncio" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "async-lru-2.0.4.tar.gz", hash = "sha256:b8a59a5df60805ff63220b2a0c5b5393da5521b113cd5465a44eb037d81a5627"}, {file = "async_lru-2.0.4-py3-none-any.whl", hash = "sha256:ff02944ce3c288c5be660c42dbcca0742b32c3b279d6dceda655190240b99224"}, @@ -227,19 +217,18 @@ description = "Classes Without Boilerplate" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "attrs-25.1.0-py3-none-any.whl", hash = "sha256:c75a69e28a550a7e93789579c22aa26b0f5b83b75dc4e08fe092980051e1090a"}, {file = "attrs-25.1.0.tar.gz", hash = "sha256:1c97078a80c814273a76b2a298a932eb681c87415c11dee0a6921de7f1b02c3e"}, ] [package.extras] -benchmark = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-codspeed", "pytest-mypy-plugins", "pytest-xdist[psutil]"] -cov = ["cloudpickle", "coverage[toml] (>=5.3)", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] -dev = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pre-commit-uv", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] +benchmark = ["cloudpickle ; platform_python_implementation == \"CPython\"", "hypothesis", "mypy (>=1.11.1) ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pympler", "pytest (>=4.3.0)", "pytest-codspeed", "pytest-mypy-plugins ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pytest-xdist[psutil]"] +cov = ["cloudpickle ; platform_python_implementation == \"CPython\"", "coverage[toml] (>=5.3)", "hypothesis", "mypy (>=1.11.1) ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pytest-xdist[psutil]"] +dev = ["cloudpickle ; platform_python_implementation == \"CPython\"", "hypothesis", "mypy (>=1.11.1) ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pre-commit-uv", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pytest-xdist[psutil]"] docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier (<24.7)"] -tests = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] -tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"] +tests = ["cloudpickle ; platform_python_implementation == \"CPython\"", "hypothesis", "mypy (>=1.11.1) ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pytest-xdist[psutil]"] +tests-mypy = ["mypy (>=1.11.1) ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pytest-mypy-plugins ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\""] [[package]] name = "babel" @@ -248,14 +237,13 @@ description = "Internationalization utilities" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "babel-2.17.0-py3-none-any.whl", hash = "sha256:4d0b53093fdfb4b21c92b5213dba5a1b23885afa8383709427046b21c366e5f2"}, {file = "babel-2.17.0.tar.gz", hash = "sha256:0c54cffb19f690cdcc52a3b50bcbf71e07a808d1c80d549f2459b9d2cf0afb9d"}, ] [package.extras] -dev = ["backports.zoneinfo", "freezegun (>=1.0,<2.0)", "jinja2 (>=3.0)", "pytest (>=6.0)", "pytest-cov", "pytz", "setuptools", "tzdata"] +dev = ["backports.zoneinfo ; python_version < \"3.9\"", "freezegun (>=1.0,<2.0)", "jinja2 (>=3.0)", "pytest (>=6.0)", "pytest-cov", "pytz", "setuptools", "tzdata ; sys_platform == \"win32\""] [[package]] name = "bcp47" @@ -264,7 +252,6 @@ description = "Language tags made easy" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "bcp47-0.1.0-py3-none-any.whl", hash = "sha256:a567b7fe881c900916a9db62ac8f792370c7ddf2664e601b74eeed35d8758aa5"}, {file = "bcp47-0.1.0.tar.gz", hash = "sha256:37cc7a03fd696149ebfe7de785c5bad473f911eddac8415cf479584049cf03d5"}, @@ -277,7 +264,6 @@ description = "Screen-scraping library" optional = false python-versions = ">=3.7.0" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "beautifulsoup4-4.13.3-py3-none-any.whl", hash = "sha256:99045d7d3f08f91f0d656bc9b7efbae189426cd913d830294a15eefa0ea4df16"}, {file = "beautifulsoup4-4.13.3.tar.gz", hash = "sha256:1bd32405dacc920b42b83ba01644747ed77456a65760e285fbc47633ceddaf8b"}, @@ -301,7 +287,6 @@ description = "Integrated registry of biological databases and nomenclatures" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "bioregistry-0.11.35-py3-none-any.whl", hash = "sha256:64713a6595190175d506f2053b1599707a8cf266a2ba44cff3c2e29b71063f90"}, {file = "bioregistry-0.11.35.tar.gz", hash = "sha256:f3c57638c193161674f3569312dd6c3a3f99ace862a5c8e0c7986c06e30815d0"}, @@ -334,7 +319,6 @@ description = "An easy safelist-based HTML-sanitizing tool." optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "bleach-6.2.0-py3-none-any.whl", hash = "sha256:117d9c6097a7c3d22fd578fcd8d35ff1e125df6736f554da4e432fdd63f31e5e"}, {file = "bleach-6.2.0.tar.gz", hash = "sha256:123e894118b8a599fd80d3ec1a6d4cc7ce4e5882b1317a7e1ba69b56e95f991f"}, @@ -354,7 +338,6 @@ description = "Extensible memoizing collections and decorators" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "cachetools-5.5.1-py3-none-any.whl", hash = "sha256:b76651fdc3b24ead3c648bbdeeb940c1b04d365b38b4af66788f9ec4a81d42bb"}, {file = "cachetools-5.5.1.tar.gz", hash = "sha256:70f238fbba50383ef62e55c6aff6d9673175fe59f7c6782c7a0b9e38f4a9df95"}, @@ -367,7 +350,6 @@ description = "Composable complex class support for attrs and dataclasses." optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "cattrs-24.1.2-py3-none-any.whl", hash = "sha256:67c7495b760168d931a10233f979b28dc04daf853b30752246f4f8471c6d68d0"}, {file = "cattrs-24.1.2.tar.gz", hash = "sha256:8028cfe1ff5382df59dd36474a86e02d817b06eaf8af84555441bac915d2ef85"}, @@ -382,8 +364,8 @@ typing-extensions = {version = ">=4.1.0,<4.6.3 || >4.6.3", markers = "python_ver bson = ["pymongo (>=4.4.0)"] cbor2 = ["cbor2 (>=5.4.6)"] msgpack = ["msgpack (>=1.0.5)"] -msgspec = ["msgspec (>=0.18.5)"] -orjson = ["orjson (>=3.9.2)"] +msgspec = ["msgspec (>=0.18.5) ; implementation_name == \"cpython\""] +orjson = ["orjson (>=3.9.2) ; implementation_name == \"cpython\""] pyyaml = ["pyyaml (>=6.0)"] tomlkit = ["tomlkit (>=0.11.8)"] ujson = ["ujson (>=5.7.0)"] @@ -395,7 +377,6 @@ description = "Python package for providing Mozilla's CA Bundle." optional = false python-versions = ">=3.6" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "certifi-2025.1.31-py3-none-any.whl", hash = "sha256:ca78db4565a652026a4db2bcdf68f2fb589ea80d0be70e03929ed730746b84fe"}, {file = "certifi-2025.1.31.tar.gz", hash = "sha256:3d5da6925056f6f18f119200434a4780a94263f10d1c21d032a6f6b2baa20651"}, @@ -408,7 +389,6 @@ description = "Foreign Function Interface for Python calling C code." optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "cffi-1.17.1-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:df8b1c11f177bc2313ec4b2d46baec87a5f3e71fc8b45dab2ee7cae86d9aba14"}, {file = "cffi-1.17.1-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:8f2cdc858323644ab277e9bb925ad72ae0e67f69e804f4898c070998d50b1a67"}, @@ -489,7 +469,6 @@ description = "rdflib collections flattening graph" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "CFGraph-0.2.1.tar.gz", hash = "sha256:b57fe7044a10b8ff65aa3a8a8ddc7d4cd77bf511b42e57289cd52cbc29f8fe74"}, ] @@ -504,7 +483,6 @@ description = "Universal encoding detector for Python 3" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "chardet-5.2.0-py3-none-any.whl", hash = "sha256:e1cf59446890a00105fe7b7912492ea04b6e6f06d4b742b2c788469e34c82970"}, {file = "chardet-5.2.0.tar.gz", hash = "sha256:1b3b6ff479a8c414bc3fa2c0852995695c4a026dcd6d0633b2dd092ca39c1cf7"}, @@ -517,7 +495,6 @@ description = "The Real First Universal Charset Detector. Open, modern and activ optional = false python-versions = ">=3.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "charset_normalizer-3.4.1-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:91b36a978b5ae0ee86c394f5a54d6ef44db1de0815eb43de826d41d21e4af3de"}, {file = "charset_normalizer-3.4.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:7461baadb4dc00fd9e0acbe254e3d7d2112e7f92ced2adc96e54ef6501c5f176"}, @@ -620,7 +597,6 @@ description = "Lookup and instantiate classes with style." optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "class_resolver-0.5.4-py3-none-any.whl", hash = "sha256:d0893e145a925a6b11d1c5f5b0ddbba35eb30788e68a800fb6cf91d348f47592"}, {file = "class_resolver-0.5.4.tar.gz", hash = "sha256:e09dc2ea33712f1c2dd151671cb6dc8e68777be80c1136c9748eacb84f83d638"}, @@ -634,7 +610,7 @@ click = ["click"] docs = ["sphinx (<8)", "sphinx-automodapi", "sphinx-rtd-theme"] numpy = ["numpy"] optuna = ["optuna"] -ray = ["ray[tune] (<2.0.0)"] +ray = ["ray[tune] (<2.0.0) ; python_version < \"3.9\""] sklearn = ["scikit-learn"] tabulate = ["tabulate"] tests = ["coverage", "docdata", "pytest"] @@ -648,7 +624,6 @@ description = "Composable command line interface toolkit" optional = false python-versions = ">=3.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "click-8.1.8-py3-none-any.whl", hash = "sha256:63c132bbbed01578a06712a2d1f497bb62d9c1c0d329b7903a866228027263b2"}, {file = "click-8.1.8.tar.gz", hash = "sha256:ed53c9d8990d83c2a27deae68e4ee337473f6330c040a31d4225c9574d16096a"}, @@ -664,7 +639,7 @@ description = "click_default_group" optional = true python-versions = ">=2.7" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "click_default_group-1.2.4-py2.py3-none-any.whl", hash = "sha256:9b60486923720e7fc61731bdb32b617039aba820e22e1c88766b1125592eaa5f"}, {file = "click_default_group-1.2.4.tar.gz", hash = "sha256:eb3f3c99ec0d456ca6cd2a7f08f7d4e91771bef51b01bdd9580cc6450fe1251e"}, @@ -683,7 +658,6 @@ description = "Logging integration for Click" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "click-log-0.4.0.tar.gz", hash = "sha256:3970f8570ac54491237bcdb3d8ab5e3eef6c057df29f8c3d1151a51a9c23b975"}, {file = "click_log-0.4.0-py2.py3-none-any.whl", hash = "sha256:a43e394b528d52112af599f2fc9e4b7cf3c15f94e53581f74fa6867e68c91756"}, @@ -699,7 +673,7 @@ description = "Cross-platform colored terminal text." optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7" groups = ["main", "dev"] -markers = "(platform_system == \"Windows\" or sys_platform == \"win32\") and (python_version <= \"3.11\" or python_version >= \"3.12\")" +markers = "platform_system == \"Windows\" or sys_platform == \"win32\"" files = [ {file = "colorama-0.4.6-py2.py3-none-any.whl", hash = "sha256:4f1d9991f5acc0ca119f9d443620b77f9d6b33703e51011c16baf57afb285fc6"}, {file = "colorama-0.4.6.tar.gz", hash = "sha256:08695f5cb7ed6e0531a20572697297273c47b8cae5a63ffc6d6ed5c201be6e44"}, @@ -712,7 +686,6 @@ description = "Jupyter Python Comm implementation, for usage in ipykernel, xeus- optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "comm-0.2.2-py3-none-any.whl", hash = "sha256:e6fb86cb70ff661ee8c9c14e7d36d6de3b4066f1441be4063df9c5009f0a64d3"}, {file = "comm-0.2.2.tar.gz", hash = "sha256:3fd7a84065306e07bea1773df6eb8282de51ba82f77c72f9c85716ab11fe980e"}, @@ -731,7 +704,6 @@ description = "Idiomatic conversion between URIs and compact URIs (CURIEs)" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "curies-0.10.4-py3-none-any.whl", hash = "sha256:bbb8059b7e0bababa8ee40108201b1e89649b6312a4f3b013dd33f21a792b0bc"}, {file = "curies-0.10.4.tar.gz", hash = "sha256:07d65db6b9b916729f22fb06d23b5cb98f3ba7768e643d04c654a449467c3bc5"}, @@ -758,7 +730,6 @@ description = "Diff and patch tables" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "daff-1.3.46.tar.gz", hash = "sha256:22d0da9fd6a3275b54c926a9c97b180f9258aad65113ea18f3fec52cbadcd818"}, ] @@ -770,7 +741,6 @@ description = "An implementation of the Debug Adapter Protocol for Python" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "debugpy-1.8.12-cp310-cp310-macosx_14_0_x86_64.whl", hash = "sha256:a2ba7ffe58efeae5b8fad1165357edfe01464f9aef25e814e891ec690e7dd82a"}, {file = "debugpy-1.8.12-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:cbbd4149c4fc5e7d508ece083e78c17442ee13b0e69bfa6bd63003e486770f45"}, @@ -807,7 +777,6 @@ description = "Decorators for Humans" optional = false python-versions = ">=3.5" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "decorator-5.1.1-py3-none-any.whl", hash = "sha256:b8c3f85900b9dc423225913c5aace94729fe1fa9763b38939a95226f02d37186"}, {file = "decorator-5.1.1.tar.gz", hash = "sha256:637996211036b6385ef91435e4fae22989472f9d571faba8927ba8253acbc330"}, @@ -820,7 +789,6 @@ description = "XML bomb protection for Python stdlib modules" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "defusedxml-0.7.1-py2.py3-none-any.whl", hash = "sha256:a352e7e428770286cc899e2542b6cdaedb2b4953ff269a210103ec58f6198a61"}, {file = "defusedxml-0.7.1.tar.gz", hash = "sha256:1bb3032db185915b62d7c6209c5a8792be6a32ab2fedacc84e01b52c51aa3e69"}, @@ -833,7 +801,6 @@ description = "Python @deprecated decorator to deprecate old python classes, fun optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "Deprecated-1.2.18-py2.py3-none-any.whl", hash = "sha256:bd5011788200372a32418f888e326a09ff80d0214bd961147cfed01b5c018eec"}, {file = "deprecated-1.2.18.tar.gz", hash = "sha256:422b6f6d859da6f2ef57857761bfb392480502a64c3028ca9bbe86085d72115d"}, @@ -843,7 +810,7 @@ files = [ wrapt = ">=1.10,<2" [package.extras] -dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "setuptools", "tox"] +dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "setuptools ; python_version >= \"3.12\"", "tox"] [[package]] name = "deprecation" @@ -852,7 +819,6 @@ description = "A library to handle automated deprecations" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "deprecation-2.1.0-py2.py3-none-any.whl", hash = "sha256:a10811591210e1fb0e768a8c25517cabeabcba6f0bf96564f8ff45189f90b14a"}, {file = "deprecation-2.1.0.tar.gz", hash = "sha256:72b3bde64e5d778694b0cf68178aed03d15e15477116add3fb773e581f9518ff"}, @@ -868,7 +834,6 @@ description = "A command line utility to check for unused, missing and transitiv optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "deptry-0.23.0-cp39-abi3-macosx_10_12_x86_64.whl", hash = "sha256:1f2a6817a37d76e8f6b667381b7caf6ea3e6d6c18b5be24d36c625f387c79852"}, {file = "deptry-0.23.0-cp39-abi3-macosx_11_0_arm64.whl", hash = "sha256:9601b64cc0aed42687fdd5c912d5f1e90d7f7333fb589b14e35bfdfebae866f3"}, @@ -902,7 +867,7 @@ description = "Distro - an OS platform information API" optional = true python-versions = ">=3.6" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "distro-1.9.0-py3-none-any.whl", hash = "sha256:7bffd925d65168f85027d8da9af6bddab658135b840670a223589bc0c8ef02b2"}, {file = "distro-1.9.0.tar.gz", hash = "sha256:2fa77c6fd8940f116ee1d6b94a2f90b13b5ea8d019b98bc8bafdcabcdd9bdbed"}, @@ -915,7 +880,6 @@ description = "Pythonic argument parser, that will make you smile" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "docopt-0.6.2.tar.gz", hash = "sha256:49b3a825280bd66b3aa83585ef59c4a8c82f2c8a522dbe754a8bc8d08c85c491"}, ] @@ -927,7 +891,6 @@ description = "Docutils -- Python Documentation Utilities" optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "docutils-0.21.2-py3-none-any.whl", hash = "sha256:dafca5b9e384f0e419294eb4d2ff9fa826435bf15f15b7bd45723e8ad76811b2"}, {file = "docutils-0.21.2.tar.gz", hash = "sha256:3a6b18732edf182daa3cd12775bbb338cf5691468f91eeeb109deff6ebfa986f"}, @@ -940,7 +903,7 @@ description = "DuckDB in-process database" optional = true python-versions = ">=3.7.0" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"duckdb\"" +markers = "extra == \"duckdb\"" files = [ {file = "duckdb-0.10.3-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:cd25cc8d001c09a19340739ba59d33e12a81ab285b7a6bed37169655e1cefb31"}, {file = "duckdb-0.10.3-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:2f9259c637b917ca0f4c63887e8d9b35ec248f5d987c886dfc4229d66a791009"}, @@ -998,7 +961,6 @@ description = "An implementation of lxml.xmlfile for the standard library" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "et_xmlfile-2.0.0-py3-none-any.whl", hash = "sha256:7a91720bc756843502c3b7504c77b8fe44217c85c537d85037f0f536151b2caa"}, {file = "et_xmlfile-2.0.0.tar.gz", hash = "sha256:dab3f4764309081ce75662649be815c4c9081e88f0837825f90fd28317d4da54"}, @@ -1011,7 +973,6 @@ description = "\"Python interface to NCBI's eutilities API\"" optional = false python-versions = ">=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "eutils-0.6.0-py2.py3-none-any.whl", hash = "sha256:4938c4baff6ca52141204ff3eff3a91ec1e83e52a6c5d92e7163585117b96566"}, {file = "eutils-0.6.0.tar.gz", hash = "sha256:3515178c0aadb836206a3eee2bc9f340f3213c13b53632e058eb58a9219d03cf"}, @@ -1032,7 +993,7 @@ description = "Like `typing._eval_type`, but lets older Python versions use newe optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version < \"3.10\"" +markers = "python_version == \"3.9\"" files = [ {file = "eval_type_backport-0.2.2-py3-none-any.whl", hash = "sha256:cb6ad7c393517f476f96d456d0412ea80f0a8cf96f6892834cd9340149111b0a"}, {file = "eval_type_backport-0.2.2.tar.gz", hash = "sha256:f0576b4cf01ebb5bd358d02314d31846af5e07678387486e2c798af0e7d849c1"}, @@ -1064,14 +1025,13 @@ description = "Get the currently executing AST node of a frame, and other inform optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "executing-2.2.0-py2.py3-none-any.whl", hash = "sha256:11387150cad388d62750327a53d3339fad4888b39a6fe233c3afbb54ecffd3aa"}, {file = "executing-2.2.0.tar.gz", hash = "sha256:5d108c028108fe2551d1a7b2e8b713341e2cb4fc0aa7dcf966fa4327a5226755"}, ] [package.extras] -tests = ["asttokens (>=2.1.0)", "coverage", "coverage-enable-subprocess", "ipython", "littleutils", "pytest", "rich"] +tests = ["asttokens (>=2.1.0)", "coverage", "coverage-enable-subprocess", "ipython", "littleutils", "pytest", "rich ; python_version >= \"3.11\""] [[package]] name = "fastjsonschema" @@ -1080,7 +1040,6 @@ description = "Fastest Python implementation of JSON schema" optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "fastjsonschema-2.21.1-py3-none-any.whl", hash = "sha256:c9e5b7e908310918cf494a434eeb31384dd84a98b57a30bcb1f535015b554667"}, {file = "fastjsonschema-2.21.1.tar.gz", hash = "sha256:794d4f0a58f848961ba16af7b9c85a3e88cd360df008c59aac6fc5ae9323b5d4"}, @@ -1096,7 +1055,6 @@ description = "Faultless AST for Open Biomedical Ontologies in Python." optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "fastobo-0.12.3-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:79fe4f5ba1ec1a2bc1ca0d65834cfc622db639128ba89019328937e623c54094"}, {file = "fastobo-0.12.3-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:21c347ec270d0ef6e120ba701370a8ef20953654b397d2814f62595d4d7c0062"}, @@ -1153,7 +1111,6 @@ description = "Validates fully-qualified domain names against RFC 1123, so that optional = false python-versions = ">=2.7, !=3.0, !=3.1, !=3.2, !=3.3, !=3.4, <4" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "fqdn-1.5.1-py3-none-any.whl", hash = "sha256:3a179af3761e4df6eb2e026ff9e1a3033d3587bf980a0b1b2e1e5d08d7358014"}, {file = "fqdn-1.5.1.tar.gz", hash = "sha256:105ed3677e767fb5ca086a0c1f4bb66ebc3c100be518f0e0d755d9eae164d89f"}, @@ -1166,7 +1123,6 @@ description = "Python rendering of the OWL Functional syntax" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "funowl-0.2.3-py3-none-any.whl", hash = "sha256:4c4328d03c7815cd61d6691f0fafc78dc9a78ec3dcab4c83afb64d125ad3660e"}, {file = "funowl-0.2.3.tar.gz", hash = "sha256:eecc2f58d792c714f6671a826cb2744e80cd3019fa56b3c8539ce69c8d874126"}, @@ -1187,7 +1143,6 @@ description = "Python bindings to the Google search engine." optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google-3.0.0-py2.py3-none-any.whl", hash = "sha256:889cf695f84e4ae2c55fbc0cfdaf4c1e729417fa52ab1db0485202ba173e4935"}, {file = "google-3.0.0.tar.gz", hash = "sha256:143530122ee5130509ad5e989f0512f7cb218b2d4eddbafbad40fd10e8d8ccbe"}, @@ -1203,7 +1158,6 @@ description = "Google API client core library" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google_api_core-2.24.1-py3-none-any.whl", hash = "sha256:bc78d608f5a5bf853b80bd70a795f703294de656c096c0968320830a4bc280f1"}, {file = "google_api_core-2.24.1.tar.gz", hash = "sha256:f8b36f5456ab0dd99a1b693a40a31d1e7757beea380ad1b38faaf8941eae9d8a"}, @@ -1213,7 +1167,7 @@ files = [ google-auth = ">=2.14.1,<3.0.dev0" googleapis-common-protos = ">=1.56.2,<2.0.dev0" proto-plus = [ - {version = ">=1.22.3,<2.0.0dev", markers = "python_version < \"3.13\""}, + {version = ">=1.22.3,<2.0.0dev"}, {version = ">=1.25.0,<2.0.0dev", markers = "python_version >= \"3.13\""}, ] protobuf = ">=3.19.5,<3.20.0 || >3.20.0,<3.20.1 || >3.20.1,<4.21.0 || >4.21.0,<4.21.1 || >4.21.1,<4.21.2 || >4.21.2,<4.21.3 || >4.21.3,<4.21.4 || >4.21.4,<4.21.5 || >4.21.5,<6.0.0.dev0" @@ -1221,7 +1175,7 @@ requests = ">=2.18.0,<3.0.0.dev0" [package.extras] async-rest = ["google-auth[aiohttp] (>=2.35.0,<3.0.dev0)"] -grpc = ["grpcio (>=1.33.2,<2.0dev)", "grpcio (>=1.49.1,<2.0dev)", "grpcio-status (>=1.33.2,<2.0.dev0)", "grpcio-status (>=1.49.1,<2.0.dev0)"] +grpc = ["grpcio (>=1.33.2,<2.0dev)", "grpcio (>=1.49.1,<2.0dev) ; python_version >= \"3.11\"", "grpcio-status (>=1.33.2,<2.0.dev0)", "grpcio-status (>=1.49.1,<2.0.dev0) ; python_version >= \"3.11\""] grpcgcp = ["grpcio-gcp (>=0.2.2,<1.0.dev0)"] grpcio-gcp = ["grpcio-gcp (>=0.2.2,<1.0.dev0)"] @@ -1232,7 +1186,6 @@ description = "Google API Client Library for Python" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google_api_python_client-2.160.0-py2.py3-none-any.whl", hash = "sha256:63d61fb3e4cf3fb31a70a87f45567c22f6dfe87bbfa27252317e3e2c42900db4"}, {file = "google_api_python_client-2.160.0.tar.gz", hash = "sha256:a8ccafaecfa42d15d5b5c3134ced8de08380019717fc9fb1ed510ca58eca3b7e"}, @@ -1252,7 +1205,6 @@ description = "Google Authentication Library" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google_auth-2.38.0-py2.py3-none-any.whl", hash = "sha256:e7dae6694313f434a2727bf2906f27ad259bae090d7aa896590d86feec3d9d4a"}, {file = "google_auth-2.38.0.tar.gz", hash = "sha256:8285113607d3b80a3f1543b75962447ba8a09fe85783432a784fdeef6ac094c4"}, @@ -1278,7 +1230,6 @@ description = "Google Authentication Library: httplib2 transport" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google-auth-httplib2-0.2.0.tar.gz", hash = "sha256:38aa7badf48f974f1eb9861794e9c0cb2a0511a4ec0679b1f886d108f5640e05"}, {file = "google_auth_httplib2-0.2.0-py2.py3-none-any.whl", hash = "sha256:b65a0a2123300dd71281a7bf6e64d65a0759287df52729bdd1ae2e47dc311a3d"}, @@ -1295,7 +1246,6 @@ description = "Google Authentication Library" optional = false python-versions = ">=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "google_auth_oauthlib-1.2.1-py2.py3-none-any.whl", hash = "sha256:2d58a27262d55aa1b87678c3ba7142a080098cbc2024f903c62355deb235d91f"}, {file = "google_auth_oauthlib-1.2.1.tar.gz", hash = "sha256:afd0cad092a2eaa53cd8e8298557d6de1034c6cb4a740500b5357b648af97263"}, @@ -1315,7 +1265,6 @@ description = "Common protobufs used in Google APIs" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "googleapis_common_protos-1.66.0-py2.py3-none-any.whl", hash = "sha256:d7abcd75fabb2e0ec9f74466401f6c119a0b498e27370e9be4c94cb7e382b8ed"}, {file = "googleapis_common_protos-1.66.0.tar.gz", hash = "sha256:c3e7b33d15fdca5374cc0a7346dd92ffa847425cc4ea941d970f13680052ec8c"}, @@ -1334,7 +1283,6 @@ description = "Simple Python interface for Graphviz" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "graphviz-0.20.3-py3-none-any.whl", hash = "sha256:81f848f2904515d8cd359cc611faba817598d2feaac4027b266aa3eda7b3dde5"}, {file = "graphviz-0.20.3.zip", hash = "sha256:09d6bc81e6a9fa392e7ba52135a9d49f1ed62526f96499325930e87ca1b5925d"}, @@ -1352,7 +1300,7 @@ description = "Lightweight in-process concurrent programming" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version < \"3.14\" and (platform_machine == \"aarch64\" or platform_machine == \"ppc64le\" or platform_machine == \"x86_64\" or platform_machine == \"amd64\" or platform_machine == \"AMD64\" or platform_machine == \"win32\" or platform_machine == \"WIN32\") and (python_version <= \"3.11\" or python_version >= \"3.12\")" +markers = "python_version < \"3.14\" and (platform_machine == \"aarch64\" or platform_machine == \"ppc64le\" or platform_machine == \"x86_64\" or platform_machine == \"amd64\" or platform_machine == \"AMD64\" or platform_machine == \"win32\" or platform_machine == \"WIN32\")" files = [ {file = "greenlet-3.1.1-cp310-cp310-macosx_11_0_universal2.whl", hash = "sha256:0bbae94a29c9e5c7e4a2b7f0aae5c17e8e90acbfd3bf6270eeba60c39fce3563"}, {file = "greenlet-3.1.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:0fde093fb93f35ca72a556cf72c92ea3ebfda3d79fc35bb19fbe685853869a83"}, @@ -1440,7 +1388,6 @@ description = "Google Spreadsheets Python API" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "gspread-6.1.4-py3-none-any.whl", hash = "sha256:c34781c426031a243ad154952b16f21ac56a5af90687885fbee3d1fba5280dcd"}, {file = "gspread-6.1.4.tar.gz", hash = "sha256:b8eec27de7cadb338bb1b9f14a9be168372dee8965c0da32121816b5050ac1de"}, @@ -1457,7 +1404,6 @@ description = "Complete Google Sheets formatting support for gspread worksheets" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "gspread-formatting-1.2.0.tar.gz", hash = "sha256:ba88eab6940e8f37580fc3073e89848ab7a6eaab4ed91f43b731579280c14086"}, {file = "gspread_formatting-1.2.0-py2.py3-none-any.whl", hash = "sha256:9400a2369021ae6f6b31ed12eeddea35e5cfe1fd6c795487ed228eaf10fafad5"}, @@ -1477,7 +1423,7 @@ files = [ {file = "h11-0.14.0-py3-none-any.whl", hash = "sha256:e3fe4ac4b851c468cc8363d500db52c2ead036020723024a109d37346efaa761"}, {file = "h11-0.14.0.tar.gz", hash = "sha256:8f19fbbe99e72420ff35c00b27a34cb9937e902a8b810e2c88300c6f0a3b699d"}, ] -markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} +markers = {main = "extra == \"llm\""} [[package]] name = "hbreader" @@ -1486,7 +1432,6 @@ description = "Honey Badger reader - a generic file/url/string open and read too optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "hbreader-0.9.1-py3-none-any.whl", hash = "sha256:9a6e76c9d1afc1b977374a5dc430a1ebb0ea0488205546d4678d6e31cc5f6801"}, {file = "hbreader-0.9.1.tar.gz", hash = "sha256:d2c132f8ba6276d794c66224c3297cec25c8079d0a4cf019c061611e0a3b94fa"}, @@ -1503,7 +1448,7 @@ files = [ {file = "httpcore-1.0.7-py3-none-any.whl", hash = "sha256:a3fff8f43dc260d5bd363d9f9cf1830fa3a458b332856f34282de498ed420edd"}, {file = "httpcore-1.0.7.tar.gz", hash = "sha256:8551cb62a169ec7162ac7be8d4817d561f60e08eaa485234898414bb5a8a0b4c"}, ] -markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} +markers = {main = "extra == \"llm\""} [package.dependencies] certifi = "*" @@ -1522,7 +1467,6 @@ description = "A comprehensive HTTP client library." optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "httplib2-0.22.0-py3-none-any.whl", hash = "sha256:14ae0a53c1ba8f3d37e9e27cf37eabb0fb9980f435ba405d546948b009dd64dc"}, {file = "httplib2-0.22.0.tar.gz", hash = "sha256:d7a10bc5ef5ab08322488bde8c726eeee5c8618723fdb399597ec58f3d82df81"}, @@ -1542,7 +1486,7 @@ files = [ {file = "httpx-0.28.1-py3-none-any.whl", hash = "sha256:d909fcccc110f8c7faf814ca82a9a4d816bc5a6dbfea25d6591d6985b8ba59ad"}, {file = "httpx-0.28.1.tar.gz", hash = "sha256:75e98c5f16b0f35b567856f597f06ff2270a374470a5c2392242528e3e3e42fc"}, ] -markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} +markers = {main = "extra == \"llm\""} [package.dependencies] anyio = "*" @@ -1551,7 +1495,7 @@ httpcore = "==1.*" idna = "*" [package.extras] -brotli = ["brotli", "brotlicffi"] +brotli = ["brotli ; platform_python_implementation == \"CPython\"", "brotlicffi ; platform_python_implementation != \"CPython\""] cli = ["click (==8.*)", "pygments (==2.*)", "rich (>=10,<14)"] http2 = ["h2 (>=3,<5)"] socks = ["socksio (==1.*)"] @@ -1564,7 +1508,6 @@ description = "Internationalized Domain Names in Applications (IDNA)" optional = false python-versions = ">=3.6" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "idna-3.10-py3-none-any.whl", hash = "sha256:946d195a0d259cbba61165e88e65941f16e9b36ea6ddb97f00452bae8b1287d3"}, {file = "idna-3.10.tar.gz", hash = "sha256:12f65c9b470abda6dc35cf8e63cc574b1c52b11df2c86030af0ac09b01b13ea9"}, @@ -1580,7 +1523,6 @@ description = "Iterative JSON parser with standard Python iterator interfaces" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ijson-3.3.0-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:7f7a5250599c366369fbf3bc4e176f5daa28eb6bc7d6130d02462ed335361675"}, {file = "ijson-3.3.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:f87a7e52f79059f9c58f6886c262061065eb6f7554a587be7ed3aa63e6b71b34"}, @@ -1685,7 +1627,6 @@ description = "Getting image size from png/jpeg/jpeg2000/gif file" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "imagesize-1.4.1-py2.py3-none-any.whl", hash = "sha256:0d8d18d08f840c19d0ee7ca1fd82490fdc3729b7ac93f49870406ddde8ef8d8b"}, {file = "imagesize-1.4.1.tar.gz", hash = "sha256:69150444affb9cb0d5cc5a92b3676f0b2fb7cd9ae39e947a5e11a36b4497cd4a"}, @@ -1698,7 +1639,7 @@ description = "Read metadata from Python packages" optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version < \"3.10\"" +markers = "python_version == \"3.9\"" files = [ {file = "importlib_metadata-8.6.1-py3-none-any.whl", hash = "sha256:02a89390c1e15fdfdc0d7c6b25cb3e62650d0494005c97d6f148bf5b9787525e"}, {file = "importlib_metadata-8.6.1.tar.gz", hash = "sha256:310b41d755445d74569f993ccfc22838295d9fe005425094fad953d7f15c8580"}, @@ -1708,12 +1649,12 @@ files = [ zipp = ">=3.20" [package.extras] -check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)"] +check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\""] cover = ["pytest-cov"] doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] enabler = ["pytest-enabler (>=2.2)"] perf = ["ipython"] -test = ["flufl.flake8", "importlib_resources (>=1.3)", "jaraco.test (>=5.4)", "packaging", "pyfakefs", "pytest (>=6,!=8.1.*)", "pytest-perf (>=0.9.2)"] +test = ["flufl.flake8", "importlib_resources (>=1.3) ; python_version < \"3.9\"", "jaraco.test (>=5.4)", "packaging", "pyfakefs", "pytest (>=6,!=8.1.*)", "pytest-perf (>=0.9.2)"] type = ["pytest-mypy"] [[package]] @@ -1723,7 +1664,6 @@ description = "Read resources from Python packages" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "importlib_resources-6.5.2-py3-none-any.whl", hash = "sha256:789cfdc3ed28c78b67a06acb8126751ced69a3d5f79c095a98298cd8a760ccec"}, {file = "importlib_resources-6.5.2.tar.gz", hash = "sha256:185f87adef5bcc288449d98fb4fba07cea78bc036455dd44c5fc4a2fe78fed2c"}, @@ -1733,7 +1673,7 @@ files = [ zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""} [package.extras] -check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)"] +check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\""] cover = ["pytest-cov"] doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] enabler = ["pytest-enabler (>=2.2)"] @@ -1747,7 +1687,6 @@ description = "Correctly generate plurals, singular nouns, ordinals, indefinite optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "inflect-7.5.0-py3-none-any.whl", hash = "sha256:2aea70e5e70c35d8350b8097396ec155ffd68def678c7ff97f51aa69c1d92344"}, {file = "inflect-7.5.0.tar.gz", hash = "sha256:faf19801c3742ed5a05a8ce388e0d8fe1a07f8d095c82201eb904f5d27ad571f"}, @@ -1758,7 +1697,7 @@ more_itertools = ">=8.5.0" typeguard = ">=4.0.1" [package.extras] -check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)"] +check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\""] cover = ["pytest-cov"] doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] enabler = ["pytest-enabler (>=2.2)"] @@ -1772,7 +1711,6 @@ description = "brain-dead simple config-ini parsing" optional = false python-versions = ">=3.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "iniconfig-2.0.0-py3-none-any.whl", hash = "sha256:b6a85871a79d2e3b22d2d1b94ac2824226a63c6b741c88f7ae975f18b6778374"}, {file = "iniconfig-2.0.0.tar.gz", hash = "sha256:2d91e135bf72d31a410b17c16da610a82cb55f6b0477d1a902134b24a455b8b3"}, @@ -1785,7 +1723,6 @@ description = "IPython Kernel for Jupyter" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ipykernel-6.29.5-py3-none-any.whl", hash = "sha256:afdb66ba5aa354b09b91379bac28ae4afebbb30e8b39510c9690afb7a10421b5"}, {file = "ipykernel-6.29.5.tar.gz", hash = "sha256:f093a22c4a40f8828f8e330a9c297cb93dcab13bd9678ded6de8e5cf81c56215"}, @@ -1820,7 +1757,6 @@ description = "IPython: Productive Interactive Computing" optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ipython-8.18.1-py3-none-any.whl", hash = "sha256:e8267419d72d81955ec1177f8a29aaa90ac80ad647499201119e2f05e99aa397"}, {file = "ipython-8.18.1.tar.gz", hash = "sha256:ca6f079bb33457c66e233e4580ebfc4128855b4cf6370dddd73842a9563e8a27"}, @@ -1859,7 +1795,6 @@ description = "Jupyter interactive widgets" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ipywidgets-8.1.5-py3-none-any.whl", hash = "sha256:3290f526f87ae6e77655555baba4f36681c555b8bdbbff430b70e52c34c86245"}, {file = "ipywidgets-8.1.5.tar.gz", hash = "sha256:870e43b1a35656a80c18c9503bbf2d16802db1cb487eec6fab27d683381dde17"}, @@ -1882,7 +1817,6 @@ description = "An ISO 8601 date/time/duration parser and formatter" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "isodate-0.7.2-py3-none-any.whl", hash = "sha256:28009937d8031054830160fce6d409ed342816b543597cece116d966c6d99e15"}, {file = "isodate-0.7.2.tar.gz", hash = "sha256:4cd1aa0f43ca76f4a6c6c0292a85f40b35ec2e43e315b59f06e6d32171a953e6"}, @@ -1895,7 +1829,6 @@ description = "Operations with ISO 8601 durations" optional = false python-versions = ">=3.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "isoduration-20.11.0-py3-none-any.whl", hash = "sha256:b2904c2a4228c3d44f409c8ae8e2370eb21a26f7ac2ec5446df141dde3452042"}, {file = "isoduration-20.11.0.tar.gz", hash = "sha256:ac2f9015137935279eac671f94f89eb00584f940f5dc49462a0c4ee692ba1bd9"}, @@ -1911,7 +1844,6 @@ description = "An autocompletion tool for Python that can be used for text edito optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jedi-0.19.2-py2.py3-none-any.whl", hash = "sha256:a8ef22bde8490f57fe5c7681a3c83cb58874daf72b4784de3cce5b6ef6edb5b9"}, {file = "jedi-0.19.2.tar.gz", hash = "sha256:4770dc3de41bde3966b02eb84fbcf557fb33cce26ad23da12c742fb50ecb11f0"}, @@ -1932,7 +1864,6 @@ description = "A very fast and expressive template engine." optional = false python-versions = ">=3.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jinja2-3.1.5-py3-none-any.whl", hash = "sha256:aba0f4dc9ed8013c424088f68a5c226f7d6097ed89b246d7749c2ec4175c6adb"}, {file = "jinja2-3.1.5.tar.gz", hash = "sha256:8fefff8dc3034e27bb80d67c671eb8a9bc424c0ef4c0826edbff304cceff43bb"}, @@ -1951,7 +1882,7 @@ description = "Fast iterable JSON parser." optional = true python-versions = ">=3.8" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "jiter-0.8.2-cp310-cp310-macosx_10_12_x86_64.whl", hash = "sha256:ca8577f6a413abe29b079bc30f907894d7eb07a865c4df69475e868d73e71c7b"}, {file = "jiter-0.8.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:b25bd626bde7fb51534190c7e3cb97cee89ee76b76d7585580e22f34f5e3f393"}, @@ -2038,7 +1969,6 @@ description = "Python library for denormalizing nested dicts or json objects to optional = false python-versions = ">=3.7.0" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "json_flattener-0.1.9-py3-none-any.whl", hash = "sha256:6b027746f08bf37a75270f30c6690c7149d5f704d8af1740c346a3a1236bc941"}, {file = "json_flattener-0.1.9.tar.gz", hash = "sha256:84cf8523045ffb124301a602602201665fcb003a171ece87e6f46ed02f7f0c15"}, @@ -2055,7 +1985,6 @@ description = "A Python implementation of the JSON5 data format." optional = false python-versions = ">=3.8.0" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "json5-0.10.0-py3-none-any.whl", hash = "sha256:19b23410220a7271e8377f81ba8aacba2fdd56947fbb137ee5977cbe1f5e8dfa"}, {file = "json5-0.10.0.tar.gz", hash = "sha256:e66941c8f0a02026943c52c2eb34ebeb2a6f819a0be05920a6f5243cd30fd559"}, @@ -2071,7 +2000,6 @@ description = "JSON as python objects" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonasobj-1.3.1-py3-none-any.whl", hash = "sha256:b9e329dc1ceaae7cf5d5b214684a0b100e0dad0be6d5bbabac281ec35ddeca65"}, {file = "jsonasobj-1.3.1.tar.gz", hash = "sha256:d52e0544a54a08f6ea3f77fa3387271e3648655e0eace2f21e825c26370e44a2"}, @@ -2084,7 +2012,6 @@ description = "JSON as python objects - version 2" optional = false python-versions = ">=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonasobj2-1.0.4-py3-none-any.whl", hash = "sha256:12e86f86324d54fcf60632db94ea74488d5314e3da554c994fe1e2c6f29acb79"}, {file = "jsonasobj2-1.0.4.tar.gz", hash = "sha256:f50b1668ef478004aa487b2d2d094c304e5cb6b79337809f4a1f2975cc7fbb4e"}, @@ -2100,7 +2027,6 @@ description = "Library with helpers for the jsonlines file format" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonlines-4.0.0-py3-none-any.whl", hash = "sha256:185b334ff2ca5a91362993f42e83588a360cf95ce4b71a73548502bda52a7c55"}, {file = "jsonlines-4.0.0.tar.gz", hash = "sha256:0c6d2c09117550c089995247f605ae4cf77dd1533041d366351f6f298822ea74"}, @@ -2116,7 +2042,6 @@ description = "Apply JSON-Patches (RFC 6902)" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonpatch-1.33-py2.py3-none-any.whl", hash = "sha256:0ae28c0cd062bbd8b8ecc26d7d164fbbea9652a1a3693f3b956c1eae5145dade"}, {file = "jsonpatch-1.33.tar.gz", hash = "sha256:9fcd4009c41e6d12348b4a0ff2563ba56a2923a7dfee731d004e212e1ee5030c"}, @@ -2132,7 +2057,6 @@ description = "A final implementation of JSONPath for Python that aims to be sta optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonpath-ng-1.7.0.tar.gz", hash = "sha256:f6f5f7fd4e5ff79c785f1573b394043b39849fb2bb47bcead935d12b00beab3c"}, {file = "jsonpath_ng-1.7.0-py2-none-any.whl", hash = "sha256:898c93fc173f0c336784a3fa63d7434297544b7198124a68f9a3ef9597b0ae6e"}, @@ -2149,7 +2073,6 @@ description = "Identify specific nodes in a JSON document (RFC 6901)" optional = false python-versions = ">=3.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonpointer-3.0.0-py2.py3-none-any.whl", hash = "sha256:13e088adc14fca8b6aa8177c044e12701e6ad4b28ff10e65f2267a90109c9942"}, {file = "jsonpointer-3.0.0.tar.gz", hash = "sha256:2b2d729f2091522d61c3b31f82e11870f60b68f43fbc705cb76bf4b832af59ef"}, @@ -2162,7 +2085,6 @@ description = "An implementation of JSON Schema validation for Python" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonschema-4.23.0-py3-none-any.whl", hash = "sha256:fbadb6f8b144a8f8cf9f0b89ba94501d143e50411a1278633f56a7acf7fd5566"}, {file = "jsonschema-4.23.0.tar.gz", hash = "sha256:d71497fef26351a33265337fa77ffeb82423f3ea21283cd9467bb03999266bc4"}, @@ -2215,7 +2137,6 @@ description = "The JSON Schema meta-schemas and vocabularies, exposed as a Regis optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jsonschema_specifications-2024.10.1-py3-none-any.whl", hash = "sha256:a09a0680616357d9a0ecf05c12ad234479f549239d0f5b55f3deea67475da9bf"}, {file = "jsonschema_specifications-2024.10.1.tar.gz", hash = "sha256:0f38b83639958ce1152d02a7f062902c41c8fd20d558b0c34344292d417ae272"}, @@ -2231,7 +2152,6 @@ description = "Jupyter metapackage. Install all the Jupyter components in one go optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter-1.1.1-py2.py3-none-any.whl", hash = "sha256:7a59533c22af65439b24bbe60373a4e95af8f16ac65a6c00820ad378e3f7cc83"}, {file = "jupyter-1.1.1.tar.gz", hash = "sha256:d55467bceabdea49d7e3624af7e33d59c37fff53ed3a350e1ac957bed731de7a"}, @@ -2252,7 +2172,6 @@ description = "Jupyter protocol implementation and client libraries" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_client-8.6.3-py3-none-any.whl", hash = "sha256:e8a19cc986cc45905ac3362915f410f3af85424b4c0905e94fa5f2cb08e8f23f"}, {file = "jupyter_client-8.6.3.tar.gz", hash = "sha256:35b3a0947c4a6e9d589eb97d7d4cd5e90f910ee73101611f01283732bd6d9419"}, @@ -2268,7 +2187,7 @@ traitlets = ">=5.3" [package.extras] docs = ["ipykernel", "myst-parser", "pydata-sphinx-theme", "sphinx (>=4)", "sphinx-autodoc-typehints", "sphinxcontrib-github-alt", "sphinxcontrib-spelling"] -test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pytest (<8.2.0)", "pytest-cov", "pytest-jupyter[client] (>=0.4.1)", "pytest-timeout"] +test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko ; sys_platform == \"win32\"", "pre-commit", "pytest (<8.2.0)", "pytest-cov", "pytest-jupyter[client] (>=0.4.1)", "pytest-timeout"] [[package]] name = "jupyter-console" @@ -2277,7 +2196,6 @@ description = "Jupyter terminal console" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_console-6.6.3-py3-none-any.whl", hash = "sha256:309d33409fcc92ffdad25f0bcdf9a4a9daa61b6f341177570fdac03de5352485"}, {file = "jupyter_console-6.6.3.tar.gz", hash = "sha256:566a4bf31c87adbfadf22cdf846e3069b59a71ed5da71d6ba4d8aaad14a53539"}, @@ -2303,7 +2221,6 @@ description = "Jupyter core package. A base package on which Jupyter projects re optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_core-5.7.2-py3-none-any.whl", hash = "sha256:4f7315d2f6b4bcf2e3e7cb6e46772eba760ae459cd1f59d29eb57b0a01bd7409"}, {file = "jupyter_core-5.7.2.tar.gz", hash = "sha256:aa5f8d32bbf6b431ac830496da7392035d6f61b4f54872f15c4bd2a9c3f536d9"}, @@ -2325,7 +2242,6 @@ description = "Jupyter Event System library" optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_events-0.12.0-py3-none-any.whl", hash = "sha256:6464b2fa5ad10451c3d35fabc75eab39556ae1e2853ad0c0cc31b656731a97fb"}, {file = "jupyter_events-0.12.0.tar.gz", hash = "sha256:fc3fce98865f6784c9cd0a56a20644fc6098f21c8c33834a8d9fe383c17e554b"}, @@ -2353,7 +2269,6 @@ description = "Multi-Language Server WebSocket proxy for Jupyter Notebook/Lab se optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter-lsp-2.2.5.tar.gz", hash = "sha256:793147a05ad446f809fd53ef1cd19a9f5256fd0a2d6b7ce943a982cb4f545001"}, {file = "jupyter_lsp-2.2.5-py3-none-any.whl", hash = "sha256:45fbddbd505f3fbfb0b6cb2f1bc5e15e83ab7c79cd6e89416b248cb3c00c11da"}, @@ -2370,7 +2285,6 @@ description = "The backend—i.e. core services, APIs, and REST endpoints—to J optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_server-2.15.0-py3-none-any.whl", hash = "sha256:872d989becf83517012ee669f09604aa4a28097c0bd90b2f424310156c2cdae3"}, {file = "jupyter_server-2.15.0.tar.gz", hash = "sha256:9d446b8697b4f7337a1b7cdcac40778babdd93ba614b6d68ab1c0c918f1c4084"}, @@ -2408,7 +2322,6 @@ description = "A Jupyter Server Extension Providing Terminals." optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyter_server_terminals-0.5.3-py3-none-any.whl", hash = "sha256:41ee0d7dc0ebf2809c668e0fc726dfaf258fcd3e769568996ca731b6194ae9aa"}, {file = "jupyter_server_terminals-0.5.3.tar.gz", hash = "sha256:5ae0295167220e9ace0edcfdb212afd2b01ee8d179fe6f23c899590e9b8a5269"}, @@ -2429,7 +2342,6 @@ description = "JupyterLab computational environment" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab-4.3.5-py3-none-any.whl", hash = "sha256:571bbdee20e4c5321ab5195bc41cf92a75a5cff886be5e57ce78dfa37a5e9fdb"}, {file = "jupyterlab-4.3.5.tar.gz", hash = "sha256:c779bf72ced007d7d29d5bcef128e7fdda96ea69299e19b04a43635a7d641f9d"}, @@ -2466,7 +2378,6 @@ description = "Pygments theme using JupyterLab CSS variables" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab_pygments-0.3.0-py3-none-any.whl", hash = "sha256:841a89020971da1d8693f1a99997aefc5dc424bb1b251fd6322462a1b8842780"}, {file = "jupyterlab_pygments-0.3.0.tar.gz", hash = "sha256:721aca4d9029252b11cfa9d185e5b5af4d54772bb8072f9b7036f4170054d35d"}, @@ -2479,7 +2390,6 @@ description = "A set of server components for JupyterLab and JupyterLab like app optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab_server-2.27.3-py3-none-any.whl", hash = "sha256:e697488f66c3db49df675158a77b3b017520d772c6e1548c7d9bcc5df7944ee4"}, {file = "jupyterlab_server-2.27.3.tar.gz", hash = "sha256:eb36caca59e74471988f0ae25c77945610b887f777255aa21f8065def9e51ed4"}, @@ -2507,7 +2417,6 @@ description = "Jupyter interactive widgets for JupyterLab" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "jupyterlab_widgets-3.0.13-py3-none-any.whl", hash = "sha256:e3cda2c233ce144192f1e29914ad522b2f4c40e77214b0cc97377ca3d323db54"}, {file = "jupyterlab_widgets-3.0.13.tar.gz", hash = "sha256:a2966d385328c1942b683a8cd96b89b8dd82c8b8f81dda902bb2bc06d46f5bed"}, @@ -2520,7 +2429,6 @@ description = "Schema for the KGCL project." optional = false python-versions = ">=3.8,<4.0" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "kgcl_rdflib-0.5.0-py3-none-any.whl", hash = "sha256:214c011eac692384dd18397e455af2a7375f6a2f71fa318df245e8826678f454"}, {file = "kgcl_rdflib-0.5.0.tar.gz", hash = "sha256:19e34690316714b9c500e1749a35d1a0d17282f2a38cd2b1fd3d7d8cf5e6013d"}, @@ -2537,7 +2445,6 @@ description = "Schema for the KGCL project." optional = false python-versions = "<4.0,>=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "kgcl_schema-0.6.9-py3-none-any.whl", hash = "sha256:6acd367a4cd998ec8dfe70987bf797aecce558df86a1395bc8c3e0489f66b9a9"}, {file = "kgcl_schema-0.6.9.tar.gz", hash = "sha256:1bb0f9f13356df7b5c6ba9c73a7124dc897e525af49f40454dafd45bfca021bd"}, @@ -2556,7 +2463,6 @@ description = "a modern parsing library" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "lark-1.2.2-py3-none-any.whl", hash = "sha256:c2276486b02f0f1b90be155f2c8ba4a8e194d42775786db622faccd652d8e80c"}, {file = "lark-1.2.2.tar.gz", hash = "sha256:ca807d0162cd16cef15a8feecb862d7319e7a09bdb13aef927968e45040fed80"}, @@ -2575,7 +2481,6 @@ description = "Linked Open Data Modeling Language" optional = false python-versions = "<4.0.0,>=3.8.1" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "linkml-1.8.6-py3-none-any.whl", hash = "sha256:17e222cbbf8873508fbcc6c39d1ce06b6b14a372adc73bbaffe3d328d1af59ea"}, {file = "linkml-1.8.6.tar.gz", hash = "sha256:81da9eb75a1cdbe050eaa421fbe4c1e035be9f5f05c154ec667a2ec711839bc5"}, @@ -2610,9 +2515,9 @@ watchdog = ">=0.9.0" [package.extras] black = ["black (>=24.0.0)"] -numpydantic = ["numpydantic (>=1.6.1)"] +numpydantic = ["numpydantic (>=1.6.1) ; python_version >= \"3.9\""] shacl = ["pyshacl (>=0.25.0,<0.26.0)"] -tests = ["black (>=24.0.0)", "numpydantic (>=1.6.1)", "pyshacl (>=0.25.0,<0.26.0)"] +tests = ["black (>=24.0.0)", "numpydantic (>=1.6.1) ; python_version >= \"3.9\"", "pyshacl (>=0.25.0,<0.26.0)"] [[package]] name = "linkml-dataops" @@ -2621,7 +2526,6 @@ description = "LinkML Data Operations API" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "linkml_dataops-0.1.0-py3-none-any.whl", hash = "sha256:193cf7f659e5f07946d2c2761896910d5f7151d91282543b1363801f68307f4c"}, {file = "linkml_dataops-0.1.0.tar.gz", hash = "sha256:4550eab65e78b70dc3b9c651724a94ac2b1d1edb2fbe576465f1d6951a54ed04"}, @@ -2641,7 +2545,6 @@ description = "linkml-renderer" optional = false python-versions = "<4.0,>=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "linkml_renderer-0.3.1-py3-none-any.whl", hash = "sha256:3737247ecc349c270b849c55593719fb457b385223ef8f75e7e7b0da11eb12e3"}, {file = "linkml_renderer-0.3.1.tar.gz", hash = "sha256:f600ca96d603e53b7187abe1dc9c417334bd96756d3e4f704a96892f6b28ba5a"}, @@ -2660,7 +2563,6 @@ description = "Runtime environment for LinkML, the Linked open data modeling lan optional = false python-versions = "<4.0,>=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "linkml_runtime-1.8.3-py3-none-any.whl", hash = "sha256:0750920f1348fffa903d99e7b5834ce425a2a538285aff9068dbd96d05caabd1"}, {file = "linkml_runtime-1.8.3.tar.gz", hash = "sha256:5b7f682eef54aaf0a59c50eeacdb11463b43b124a044caf496cde59936ac05c8"}, @@ -2688,7 +2590,7 @@ description = "A CLI utility and Python library for interacting with Large Langu optional = true python-versions = ">=3.9" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "llm-0.21-py3-none-any.whl", hash = "sha256:d045276c92d0eb4e5f2978123ad1a0f607085cdd454ef055731a55487ae5c0a6"}, {file = "llm-0.21.tar.gz", hash = "sha256:ac1717e7cb68275271ad90d8f045407e59215a69b4ccc222ef4e60c43edeb95e"}, @@ -2719,7 +2621,6 @@ description = "Powerful and Pythonic XML processing library combining libxml2/li optional = false python-versions = ">=3.6" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "lxml-5.3.0-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:dd36439be765e2dde7660212b5275641edbc813e7b24668831a5c8ac91180656"}, {file = "lxml-5.3.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:ae5fe5c4b525aa82b8076c1a59d642c17b6e8739ecf852522c6321852178119d"}, @@ -2875,7 +2776,7 @@ description = "Python MariaDB extension" optional = true python-versions = ">=3.8" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"mariadb\"" +markers = "extra == \"mariadb\"" files = [ {file = "mariadb-1.1.11-cp310-cp310-win32.whl", hash = "sha256:dbc4cf0e302ca82d46f9431a0b04f048e9c21ee56d6f3162c29605f84d63b40c"}, {file = "mariadb-1.1.11-cp310-cp310-win_amd64.whl", hash = "sha256:579420293fa790d5ae0a6cb4bdb7e8be8facc2ceefb6123c2b0e8042b3fa725d"}, @@ -2900,7 +2801,6 @@ description = "Python port of markdown-it. Markdown parsing, done right!" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "markdown-it-py-3.0.0.tar.gz", hash = "sha256:e3f60a94fa066dc52ec76661e37c851cb232d92f9886b15cb560aaada2df8feb"}, {file = "markdown_it_py-3.0.0-py3-none-any.whl", hash = "sha256:355216845c60bd96232cd8d8c40e8f9765cc86f46880e43a8fd22dc1a1a8cab1"}, @@ -2926,7 +2826,6 @@ description = "Safely add untrusted strings to HTML/XML markup." optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "MarkupSafe-3.0.2-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:7e94c425039cde14257288fd61dcfb01963e658efbc0ff54f5306b06054700f8"}, {file = "MarkupSafe-3.0.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:9e2d922824181480953426608b81967de705c3cef4d1af983af849d7bd619158"}, @@ -2998,7 +2897,6 @@ description = "Inline Matplotlib backend for Jupyter" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "matplotlib_inline-0.1.7-py3-none-any.whl", hash = "sha256:df192d39a4ff8f21b1895d72e6a13f5fcc5099f00fa84384e0ea28c2cc0653ca"}, {file = "matplotlib_inline-0.1.7.tar.gz", hash = "sha256:8423b23ec666be3d16e16b60bdd8ac4e86e840ebd1dd11a30b9f117f2fa0ab90"}, @@ -3014,7 +2912,6 @@ description = "Collection of plugins for markdown-it-py" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mdit_py_plugins-0.4.2-py3-none-any.whl", hash = "sha256:0c673c3f889399a33b95e88d2f0d111b4447bdfea7f237dab2d488f459835636"}, {file = "mdit_py_plugins-0.4.2.tar.gz", hash = "sha256:5f2cd1fdb606ddf152d37ec30e46101a60512bc0e5fa1a7002c36647b09e26b5"}, @@ -3035,7 +2932,6 @@ description = "Markdown URL utilities" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mdurl-0.1.2-py3-none-any.whl", hash = "sha256:84008a41e51615a49fc9966191ff91509e3c40b939176e643fd50a5c2196b8f8"}, {file = "mdurl-0.1.2.tar.gz", hash = "sha256:bb413d29f5eea38f31dd4754dd7377d4465116fb207585f97bf925588687c1ba"}, @@ -3048,7 +2944,6 @@ description = "A sane and fast Markdown parser with useful plugins and renderers optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mistune-3.1.1-py3-none-any.whl", hash = "sha256:02106ac2aa4f66e769debbfa028509a275069dcffce0dfa578edd7b991ee700a"}, {file = "mistune-3.1.1.tar.gz", hash = "sha256:e0740d635f515119f7d1feb6f9b192ee60f0cc649f80a8f944f905706a21654c"}, @@ -3064,7 +2959,6 @@ description = "More click." optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "more_click-0.1.2-py3-none-any.whl", hash = "sha256:f6387af37ef7e7423bd94b72a81a53c79c5086a3bfe5cc035da534ff0c2a0a9e"}, {file = "more_click-0.1.2.tar.gz", hash = "sha256:085da66d5a9b823c5d912a888dca1fa0c8b3a14ed1b21ea9c8a1b814857a3981"}, @@ -3083,7 +2977,6 @@ description = "More routines for operating on iterables, beyond itertools" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "more-itertools-10.6.0.tar.gz", hash = "sha256:2cd7fad1009c31cc9fb6a035108509e6547547a7a738374f10bd49a09eb3ee3b"}, {file = "more_itertools-10.6.0-py3-none-any.whl", hash = "sha256:6eb054cb4b6db1473f6e15fcc676a08e4732548acd47c708f0e179c2c7c01e89"}, @@ -3096,7 +2989,6 @@ description = "Type system extensions for programs checked with the mypy type ch optional = false python-versions = ">=3.5" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "mypy_extensions-1.0.0-py3-none-any.whl", hash = "sha256:4392f6c0eb8a5668a69e23d168ffa70f0be9ccfd32b5cc2d26a34ae5b844552d"}, {file = "mypy_extensions-1.0.0.tar.gz", hash = "sha256:75dbf8955dc00442a438fc4d0666508a9a97b6bd41aa2f0ffe9d2f2725af0782"}, @@ -3109,7 +3001,6 @@ description = "An extended [CommonMark](https://spec.commonmark.org/) compliant optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "myst_parser-3.0.1-py3-none-any.whl", hash = "sha256:6457aaa33a5d474aca678b8ead9b3dc298e89c68e67012e73146ea6fd54babf1"}, {file = "myst_parser-3.0.1.tar.gz", hash = "sha256:88f0cb406cb363b077d176b51c476f62d60604d68a8dcdf4832e080441301a87"}, @@ -3137,7 +3028,6 @@ description = "A client library for executing notebooks. Formerly nbconvert's Ex optional = false python-versions = ">=3.9.0" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbclient-0.10.2-py3-none-any.whl", hash = "sha256:4ffee11e788b4a27fabeb7955547e4318a5298f34342a4bfd01f2e1faaeadc3d"}, {file = "nbclient-0.10.2.tar.gz", hash = "sha256:90b7fc6b810630db87a6d0c2250b1f0ab4cf4d3c27a299b0cde78a4ed3fd9193"}, @@ -3161,7 +3051,6 @@ description = "Converting Jupyter Notebooks (.ipynb files) to other formats. Ou optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbconvert-7.16.6-py3-none-any.whl", hash = "sha256:1375a7b67e0c2883678c48e506dc320febb57685e5ee67faa51b18a90f3a712b"}, {file = "nbconvert-7.16.6.tar.gz", hash = "sha256:576a7e37c6480da7b8465eefa66c17844243816ce1ccc372633c6b71c3c0f582"}, @@ -3200,7 +3089,6 @@ description = "The Jupyter Notebook format" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nbformat-5.10.4-py3-none-any.whl", hash = "sha256:3b48d6c8fbca4b299bf3982ea7db1af21580e4fec269ad087b9e81588891200b"}, {file = "nbformat-5.10.4.tar.gz", hash = "sha256:322168b14f937a5d11362988ecac2a4952d3d8e3a2cbeb2319584631226d5b3a"}, @@ -3223,7 +3111,6 @@ description = "Nice CX Python includes a client and a data model." optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ndex2-3.10.0-py2.py3-none-any.whl", hash = "sha256:fdb8307ccdbdf49044c9119373852242ca24a4926df1c5566e94965e59b70b67"}, {file = "ndex2-3.10.0.tar.gz", hash = "sha256:7e8cfc3fc940cddfd612810fc8c913ab61e01a43e4f482608e86c6548b81b7e1"}, @@ -3246,7 +3133,6 @@ description = "Patch asyncio to allow nested event loops" optional = false python-versions = ">=3.5" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "nest_asyncio-1.6.0-py3-none-any.whl", hash = "sha256:87af6efd6b5e897c81050477ef65c62e2b2f35d51703cae01aff2905b1852e1c"}, {file = "nest_asyncio-1.6.0.tar.gz", hash = "sha256:6f172d5449aca15afd6c646851f4e31e02c598d553a667e38cafa997cfec55fe"}, @@ -3259,7 +3145,6 @@ description = "Python package for creating and manipulating graphs and networks" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "networkx-3.2.1-py3-none-any.whl", hash = "sha256:f18c69adc97877c42332c170849c96cefa91881c99a7cb3e95b7c659ebdc1ec2"}, {file = "networkx-3.2.1.tar.gz", hash = "sha256:9f1bb5cf3409bf324e0a722c20bdb4c20ee39bf1c30ce8ae499c8502b0b5e0c6"}, @@ -3279,7 +3164,6 @@ description = "Jupyter Notebook - A web-based notebook environment for interacti optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "notebook-7.3.2-py3-none-any.whl", hash = "sha256:e5f85fc59b69d3618d73cf27544418193ff8e8058d5bf61d315ce4f473556288"}, {file = "notebook-7.3.2.tar.gz", hash = "sha256:705e83a1785f45b383bf3ee13cb76680b92d24f56fb0c7d2136fe1d850cd3ca8"}, @@ -3295,7 +3179,7 @@ tornado = ">=6.2.0" [package.extras] dev = ["hatch", "pre-commit"] docs = ["myst-parser", "nbsphinx", "pydata-sphinx-theme", "sphinx (>=1.3.6)", "sphinxcontrib-github-alt", "sphinxcontrib-spelling"] -test = ["importlib-resources (>=5.0)", "ipykernel", "jupyter-server[test] (>=2.4.0,<3)", "jupyterlab-server[test] (>=2.27.1,<3)", "nbval", "pytest (>=7.0)", "pytest-console-scripts", "pytest-timeout", "pytest-tornasync", "requests"] +test = ["importlib-resources (>=5.0) ; python_version < \"3.10\"", "ipykernel", "jupyter-server[test] (>=2.4.0,<3)", "jupyterlab-server[test] (>=2.27.1,<3)", "nbval", "pytest (>=7.0)", "pytest-console-scripts", "pytest-timeout", "pytest-tornasync", "requests"] [[package]] name = "notebook-shim" @@ -3304,7 +3188,6 @@ description = "A shim layer for notebook traits and config" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "notebook_shim-0.2.4-py3-none-any.whl", hash = "sha256:411a5be4e9dc882a074ccbcae671eda64cceb068767e9a3419096986560e1cef"}, {file = "notebook_shim-0.2.4.tar.gz", hash = "sha256:b4b2cfa1b65d98307ca24361f5b30fe785b53c3fd07b7a47e89acb5e6ac638cb"}, @@ -3323,7 +3206,6 @@ description = "Modules to convert numbers to words. Easily extensible." optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "num2words-0.5.14-py3-none-any.whl", hash = "sha256:1c8e5b00142fc2966fd8d685001e36c4a9911e070d1b120e1beb721fa1edb33d"}, {file = "num2words-0.5.14.tar.gz", hash = "sha256:b066ec18e56b6616a3b38086b5747daafbaa8868b226a36127e0451c0cf379c6"}, @@ -3339,7 +3221,6 @@ description = "Fundamental package for array computing in Python" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "numpy-1.26.4-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:9ff0f4f29c51e2803569d7a51c2304de5554655a60c5d776e35b4a41413830d0"}, {file = "numpy-1.26.4-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:2e4ee3380d6de9c9ec04745830fd9e2eccb3e6cf790d39d7b98ffd19b0dd754a"}, @@ -3386,7 +3267,6 @@ description = "Ontology Access Kit: Python library for common ontology operation optional = false python-versions = "<4.0.0,>=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "oaklib-0.6.19-py3-none-any.whl", hash = "sha256:8b31cacfc525d00b66bf5953a7b3dfbae000b3d115ec9c4e4aad51b49a577840"}, {file = "oaklib-0.6.19.tar.gz", hash = "sha256:6ce85ddc5076e1a5f5e2a56a80e85eb712817052d61eb174cabc2bffe05561a2"}, @@ -3435,7 +3315,6 @@ description = "A generic, spec-compliant, thorough implementation of the OAuth r optional = false python-versions = ">=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "oauthlib-3.2.2-py3-none-any.whl", hash = "sha256:8139f29aac13e25d502680e9e19963e83f16838d48a0d71c287fe40e7067fbca"}, {file = "oauthlib-3.2.2.tar.gz", hash = "sha256:9859c40929662bec5d64f34d01c99e093149682a3f38915dc0655d5a633dd918"}, @@ -3453,7 +3332,6 @@ description = "A client to the EBI Ontology Lookup Service" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ols_client-0.1.4-py3-none-any.whl", hash = "sha256:7bdca0590042e07cc7ee3ef3fba99c3b6862cde6c8835afb129de31284b3e010"}, {file = "ols_client-0.1.4.tar.gz", hash = "sha256:cd2a0f39107f39eaf0f40b9098f12d442cf3d43e28228e63feb407d0aeb44470"}, @@ -3477,7 +3355,6 @@ description = "COGS Operates Google Sheets" optional = false python-versions = ">=3.6, <4" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ontodev-cogs-0.3.3.tar.gz", hash = "sha256:04cf448eda59e0645c6626453f7617a6b2be3129c8586c4d4a515ad031f61a18"}, {file = "ontodev_cogs-0.3.3-py3-none-any.whl", hash = "sha256:b3299b7884891d00e016f9cb0329a1a0dc8af4bfba45dce3815f654360b1f333"}, @@ -3500,7 +3377,6 @@ description = "A client to BioPortal and other OntoPortal instances." optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ontoportal_client-0.0.4-py3-none-any.whl", hash = "sha256:0dedd4ce003e0b6c1128fa05101e57bcc128ad79a6c9fcae66037d2447706c4c"}, {file = "ontoportal_client-0.0.4.tar.gz", hash = "sha256:1bf7edcb94db3ed68ea9a64c620056f0517f7e209826b05dbfda8fe27384fa48"}, @@ -3521,7 +3397,7 @@ description = "The official Python library for the openai API" optional = true python-versions = ">=3.8" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "openai-1.61.1-py3-none-any.whl", hash = "sha256:72b0826240ce26026ac2cd17951691f046e5be82ad122d20a8e1b30ca18bd11e"}, {file = "openai-1.61.1.tar.gz", hash = "sha256:ce1851507218209961f89f3520e06726c0aa7d0512386f0f977e3ac3e4f2472e"}, @@ -3548,7 +3424,6 @@ description = "A Python library to read/write Excel 2010 xlsx/xlsm files" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "openpyxl-3.1.5-py2.py3-none-any.whl", hash = "sha256:5282c12b107bffeef825f4617dc029afaf41d0ea60823bbb665ef3079dc79de2"}, {file = "openpyxl-3.1.5.tar.gz", hash = "sha256:cf0e3cf56142039133628b5acffe8ef0c12bc902d2aadd3e0fe5878dc08d1050"}, @@ -3564,7 +3439,6 @@ description = "A decorator to automatically detect mismatch when overriding a me optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "overrides-7.7.0-py3-none-any.whl", hash = "sha256:c7ed9d062f78b8e4c1a7b70bd8796b35ead4d9f510227ef9c5dc7626c60d7e49"}, {file = "overrides-7.7.0.tar.gz", hash = "sha256:55158fa3d93b98cc75299b1e67078ad9003ca27945c76162c1c0766d6f91820a"}, @@ -3577,7 +3451,6 @@ description = "Core utilities for Python packages" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "packaging-24.2-py3-none-any.whl", hash = "sha256:09abb1bccd265c01f4a3aa3f7a7db064b36514d2cba19a2f694fe6150451a759"}, {file = "packaging-24.2.tar.gz", hash = "sha256:c228a6dc5e932d346bc5739379109d49e8853dd8223571c7c5b55260edc0b97f"}, @@ -3590,7 +3463,6 @@ description = "Powerful data structures for data analysis, time series, and stat optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pandas-2.2.3-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:1948ddde24197a0f7add2bdc4ca83bf2b1ef84a1bc8ccffd95eda17fd836ecb5"}, {file = "pandas-2.2.3-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:381175499d3802cde0eabbaf6324cce0c4f5d52ca6f8c377c29ad442f50f6348"}, @@ -3678,7 +3550,6 @@ description = "A light-weight and flexible data validation and testing tool for optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pandera-0.22.1-py3-none-any.whl", hash = "sha256:2a35531b4b533ac83e606a6dcc3cd41561774ff3d872117228e931f22e72f330"}, {file = "pandera-0.22.1.tar.gz", hash = "sha256:091ebc353383ba642e5a20ee0df763ed2059ab99cb4b2ac3e83f482de8493645"}, @@ -3714,7 +3585,6 @@ description = "Utilities for writing pandoc filters in python" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pandocfilters-1.5.1-py2.py3-none-any.whl", hash = "sha256:93be382804a9cdb0a7267585f157e5d1731bbe5545a85b268d6f5fe6232de2bc"}, {file = "pandocfilters-1.5.1.tar.gz", hash = "sha256:002b4a555ee4ebc03f8b66307e287fa492e4a77b4ea14d3f934328297bb4939e"}, @@ -3727,7 +3597,6 @@ description = "sqldf for pandas" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pansql-0.0.1-py3-none-any.whl", hash = "sha256:0c49d8c23e418ac065af767ed350c544c0d6d96dc04e2faa1f8b37851d404988"}, {file = "pansql-0.0.1.tar.gz", hash = "sha256:61091112442c5d663ea5c042b6327a9b6b94c6687831677dddda46f292532e29"}, @@ -3745,7 +3614,6 @@ description = "parse() is the opposite of format()" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "parse-1.20.2-py2.py3-none-any.whl", hash = "sha256:967095588cb802add9177d0c0b6133b5ba33b1ea9007ca800e526f42a85af558"}, {file = "parse-1.20.2.tar.gz", hash = "sha256:b41d604d16503c79d81af5165155c0b20f6c8d6c559efa66b4b695c3e5a0a0ce"}, @@ -3758,7 +3626,6 @@ description = "A Python Parser" optional = false python-versions = ">=3.6" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "parso-0.8.4-py2.py3-none-any.whl", hash = "sha256:a418670a20291dacd2dddc80c377c5c3791378ee1e8d12bffc35420643d43f18"}, {file = "parso-0.8.4.tar.gz", hash = "sha256:eb3a7b58240fb99099a345571deecc0f9540ea5f4dd2fe14c2a99d6b281ab92d"}, @@ -3775,7 +3642,7 @@ description = "Pexpect allows easy control of interactive console applications." optional = false python-versions = "*" groups = ["dev"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and sys_platform != \"win32\"" +markers = "sys_platform != \"win32\"" files = [ {file = "pexpect-4.9.0-py2.py3-none-any.whl", hash = "sha256:7236d1e080e4936be2dc3e326cec0af72acf9212a7e1d060210e70a47e253523"}, {file = "pexpect-4.9.0.tar.gz", hash = "sha256:ee7d41123f3c9911050ea2c2dac107568dc43b2d3b0c7557a33212c398ead30f"}, @@ -3791,7 +3658,7 @@ description = "The PyPA recommended tool for installing Python packages." optional = true python-versions = ">=3.8" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "pip-25.0-py3-none-any.whl", hash = "sha256:b6eb97a803356a52b2dd4bb73ba9e65b2ba16caa6bcb25a7497350a4e5859b65"}, {file = "pip-25.0.tar.gz", hash = "sha256:8e0a97f7b4c47ae4a494560da84775e9e2f671d415d8d828e052efefb206b30b"}, @@ -3804,7 +3671,6 @@ description = "A small Python package for determining appropriate platform-speci optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "platformdirs-4.3.6-py3-none-any.whl", hash = "sha256:73e575e1408ab8103900836b97580d5307456908a03e92031bab39e4554cc3fb"}, {file = "platformdirs-4.3.6.tar.gz", hash = "sha256:357fb2acbc885b0419afd3ce3ed34564c13c9b95c89360cd9563f73aa5e2b907"}, @@ -3822,7 +3688,6 @@ description = "plugin and hook calling mechanisms for python" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pluggy-1.5.0-py3-none-any.whl", hash = "sha256:44e1ad92c8ca002de6377e165f3e0f1be63266ab4d554740532335b9d75ea669"}, {file = "pluggy-1.5.0.tar.gz", hash = "sha256:2cffa88e94fdc978c4c574f15f9e59b7f4201d439195c3715ca9e2486f1d0cf1"}, @@ -3839,7 +3704,6 @@ description = "Python Lex & Yacc" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ply-3.11-py2.py3-none-any.whl", hash = "sha256:096f9b8350b65ebd2fd1346b12452efe5b9607f7482813ffca50c22722a807ce"}, {file = "ply-3.11.tar.gz", hash = "sha256:00c7c1aaa88358b9c765b6d3000c6eec0ba42abca5351b095321aef446081da3"}, @@ -3852,7 +3716,6 @@ description = "A python API for working with ID prefixes" optional = false python-versions = ">=3.7,<4.0" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "prefixcommons-0.1.12-py3-none-any.whl", hash = "sha256:16dbc0a1f775e003c724f19a694fcfa3174608f5c8b0e893d494cf8098ac7f8b"}, {file = "prefixcommons-0.1.12.tar.gz", hash = "sha256:22c4e2d37b63487b3ab48f0495b70f14564cb346a15220f23919eb0c1851f69f"}, @@ -3871,7 +3734,6 @@ description = "A python library for retrieving semantic prefix maps" optional = false python-versions = "<4.0,>=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "prefixmaps-0.2.6-py3-none-any.whl", hash = "sha256:f6cef28a7320fc6337cf411be212948ce570333a0ce958940ef684c7fb192a62"}, {file = "prefixmaps-0.2.6.tar.gz", hash = "sha256:7421e1244eea610217fa1ba96c9aebd64e8162a930dc0626207cd8bf62ecf4b9"}, @@ -3888,7 +3750,6 @@ description = "Python client for the Prometheus monitoring system." optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "prometheus_client-0.21.1-py3-none-any.whl", hash = "sha256:594b45c410d6f4f8888940fe80b5cc2521b305a1fafe1c58609ef715a001f301"}, {file = "prometheus_client-0.21.1.tar.gz", hash = "sha256:252505a722ac04b0456be05c05f75f45d760c2911ffc45f2a06bcaed9f3ae3fb"}, @@ -3904,7 +3765,6 @@ description = "Library for building powerful interactive command lines in Python optional = false python-versions = ">=3.8.0" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "prompt_toolkit-3.0.50-py3-none-any.whl", hash = "sha256:9b6427eb19e479d98acff65196a307c555eb567989e6d88ebbb1b509d9779198"}, {file = "prompt_toolkit-3.0.50.tar.gz", hash = "sha256:544748f3860a2623ca5cd6d2795e7a14f3d0e1c3c9728359013f79877fc89bab"}, @@ -3920,7 +3780,6 @@ description = "Python frontend to ontologies." optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pronto-2.5.8-py2.py3-none-any.whl", hash = "sha256:91445cd2c2000729e9b23be47b1e142fd967239700284f1375ee2b78d54a3416"}, {file = "pronto-2.5.8.tar.gz", hash = "sha256:5283ec5b35ddc12d34f2e50098b9900bb7b80172b7f769ccc93f5d82b7022799"}, @@ -3939,7 +3798,6 @@ description = "Beautiful, Pythonic protocol buffers" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "proto_plus-1.26.0-py3-none-any.whl", hash = "sha256:bf2dfaa3da281fc3187d12d224c707cb57214fb2c22ba854eb0c105a3fb2d4d7"}, {file = "proto_plus-1.26.0.tar.gz", hash = "sha256:6e93d5f5ca267b54300880fff156b6a3386b3fa3f43b1da62e680fc0c586ef22"}, @@ -3958,7 +3816,6 @@ description = "" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "protobuf-5.29.3-cp310-abi3-win32.whl", hash = "sha256:3ea51771449e1035f26069c4c7fd51fba990d07bc55ba80701c78f886bf9c888"}, {file = "protobuf-5.29.3-cp310-abi3-win_amd64.whl", hash = "sha256:a4fa6f80816a9a0678429e84973f2f98cbc218cca434abe8db2ad0bffc98503a"}, @@ -3980,7 +3837,6 @@ description = "Cross-platform lib for process and system monitoring in Python." optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "psutil-6.1.1-cp27-cp27m-macosx_10_9_x86_64.whl", hash = "sha256:9ccc4316f24409159897799b83004cb1e24f9819b0dcf9c0b68bdcb6cefee6a8"}, {file = "psutil-6.1.1-cp27-cp27m-manylinux2010_i686.whl", hash = "sha256:ca9609c77ea3b8481ab005da74ed894035936223422dc591d6772b147421f777"}, @@ -4012,7 +3868,7 @@ description = "psycopg2 - Python-PostgreSQL Database Adapter" optional = true python-versions = ">=3.8" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"postgres\"" +markers = "extra == \"postgres\"" files = [ {file = "psycopg2-binary-2.9.10.tar.gz", hash = "sha256:4b3df0e6990aa98acda57d983942eff13d824135fe2250e6522edaa782a06de2"}, {file = "psycopg2_binary-2.9.10-cp310-cp310-macosx_12_0_x86_64.whl", hash = "sha256:0ea8e3d0ae83564f2fc554955d327fa081d065c8ca5cc6d2abb643e2c9c1200f"}, @@ -4091,7 +3947,7 @@ description = "Run a subprocess in a pseudo terminal" optional = false python-versions = "*" groups = ["dev"] -markers = "(os_name != \"nt\" or sys_platform != \"win32\") and (python_version <= \"3.11\" or python_version >= \"3.12\")" +markers = "os_name != \"nt\" or sys_platform != \"win32\"" files = [ {file = "ptyprocess-0.7.0-py2.py3-none-any.whl", hash = "sha256:4b41f3967fce3af57cc7e94b888626c18bf37a083e3651ca8feeb66d492fef35"}, {file = "ptyprocess-0.7.0.tar.gz", hash = "sha256:5c5d0a3b48ceee0b48485e0c26037c0acd7d29765ca3fbb5cb3831d347423220"}, @@ -4104,7 +3960,6 @@ description = "Safely evaluate AST nodes without side effects" optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pure_eval-0.2.3-py3-none-any.whl", hash = "sha256:1db8e35b67b3d218d818ae653e27f06c3aa420901fa7b081ca98cbedc874e0d0"}, {file = "pure_eval-0.2.3.tar.gz", hash = "sha256:5f4e983f40564c576c7c8635ae88db5956bb2229d7e9237d03b3c0b0190eaf42"}, @@ -4120,7 +3975,7 @@ description = "Pure python implementation of magic file detection" optional = true python-versions = "*" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "puremagic-1.28-py3-none-any.whl", hash = "sha256:e16cb9708ee2007142c37931c58f07f7eca956b3472489106a7245e5c3aa1241"}, {file = "puremagic-1.28.tar.gz", hash = "sha256:195893fc129657f611b86b959aab337207d6df7f25372209269ed9e303c1a8c0"}, @@ -4133,7 +3988,6 @@ description = "Pure-Python implementation of ASN.1 types and DER/BER/CER codecs optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pyasn1-0.6.1-py3-none-any.whl", hash = "sha256:0d632f46f2ba09143da3a8afe9e33fb6f92fa2320ab7e886e2d0f7672af84629"}, {file = "pyasn1-0.6.1.tar.gz", hash = "sha256:6f580d2bdd84365380830acf45550f2511469f673cb4a5ae3857a3170128b034"}, @@ -4146,7 +4000,6 @@ description = "A collection of ASN.1-based protocols modules" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pyasn1_modules-0.4.1-py3-none-any.whl", hash = "sha256:49bfa96b45a292b711e986f222502c1c9a5e1f4e568fc30e2574a6c7d07838fd"}, {file = "pyasn1_modules-0.4.1.tar.gz", hash = "sha256:c28e2dbf9c06ad61c71a075c7e0f9fd0f1b0bb2d2ad4377f240d33ac2ab60a7c"}, @@ -4162,7 +4015,6 @@ description = "C parser in Python" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pycparser-2.22-py3-none-any.whl", hash = "sha256:c3702b6d3dd8c7abc1afa565d7e63d53a1d0bd86cdc24edd75470f4de499cfcc"}, {file = "pycparser-2.22.tar.gz", hash = "sha256:491c8be9c040f5390f5bf44a5b07752bd07f56edf992381b05c701439eec10f6"}, @@ -4175,7 +4027,6 @@ description = "Data validation using Python type hints" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pydantic-2.10.6-py3-none-any.whl", hash = "sha256:427d664bf0b8a2b34ff5dd0f5a18df00591adcee7198fbd71981054cef37b584"}, {file = "pydantic-2.10.6.tar.gz", hash = "sha256:ca5daa827cce33de7a42be142548b0096bf05a7e7b365aebfa5f8eeec7128236"}, @@ -4188,7 +4039,7 @@ typing-extensions = ">=4.12.2" [package.extras] email = ["email-validator (>=2.0.0)"] -timezone = ["tzdata"] +timezone = ["tzdata ; python_version >= \"3.9\" and platform_system == \"Windows\""] [[package]] name = "pydantic-core" @@ -4197,7 +4048,6 @@ description = "Core functionality for Pydantic validation and serialization" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pydantic_core-2.27.2-cp310-cp310-macosx_10_12_x86_64.whl", hash = "sha256:2d367ca20b2f14095a8f4fa1210f5a7b78b8a20009ecced6b12818f455b1e9fa"}, {file = "pydantic_core-2.27.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:491a2b73db93fab69731eaee494f320faa4e093dbed776be1a829c2eb222c34c"}, @@ -4311,7 +4161,6 @@ description = "Python parser and builder for DBML" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pydbml-1.1.3-py3-none-any.whl", hash = "sha256:96453dbfa898751aa07b99dcfe9425ba9f5869fc5fc0755215aea7a9ecdaf730"}, {file = "pydbml-1.1.3.tar.gz", hash = "sha256:a0979b938143a6303470d9ce3b4c27ff353eaa1992e4406821ebce5db9d7d739"}, @@ -4327,7 +4176,6 @@ description = "Pygments is a syntax highlighting package written in Python." optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pygments-2.19.1-py3-none-any.whl", hash = "sha256:9ea1544ad55cecf4b8242fab6dd35a93bbce657034b0611ee383099054ab6d8c"}, {file = "pygments-2.19.1.tar.gz", hash = "sha256:61c16d2a8576dc0649d9f39e089b5f02bcd27fba10d8fb4dcc28173f7a45151f"}, @@ -4343,7 +4191,6 @@ description = "Python JSON Schema Grammar interpreter" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyJSG-0.11.10-py3-none-any.whl", hash = "sha256:10af60ff42219be7e85bf7f11c19b648715b0b29eb2ddbd269e87069a7c3f26d"}, {file = "PyJSG-0.11.10.tar.gz", hash = "sha256:4bd6e3ff2833fa2b395bbe803a2d72a5f0bab5b7285bccd0da1a1bc0aee88bfa"}, @@ -4360,7 +4207,6 @@ description = "pyparsing module - Classes and methods to define and execute pars optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pyparsing-3.2.1-py3-none-any.whl", hash = "sha256:506ff4f4386c4cec0590ec19e6302d3aedb992fdc02c761e90416f158dacf8e1"}, {file = "pyparsing-3.2.1.tar.gz", hash = "sha256:61980854fd66de3a90028d679a954d5f2623e83144b5afe5ee86f43d762e5f0a"}, @@ -4376,7 +4222,7 @@ description = "A python implementation of GNU readline." optional = true python-versions = ">=3.8" groups = ["main"] -markers = "extra == \"llm\" and sys_platform == \"win32\" and (python_version <= \"3.11\" or python_version >= \"3.12\")" +markers = "extra == \"llm\" and sys_platform == \"win32\"" files = [ {file = "pyreadline3-3.5.4-py3-none-any.whl", hash = "sha256:eaf8e6cc3c49bcccf145fc6067ba8643d1df34d604a1ec0eccbf7a18e6d3fae6"}, {file = "pyreadline3-3.5.4.tar.gz", hash = "sha256:8d57d53039a1c75adba8e50dd3d992b28143480816187ea5efbd5c78e6c885b7"}, @@ -4392,7 +4238,6 @@ description = "Python ShEx Implementation" optional = false python-versions = ">=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyShEx-0.8.1-py3-none-any.whl", hash = "sha256:6da1b10123e191abf8dcb6bf3e54aa3e1fcf771df5d1a0ed453217c8900c8e6a"}, {file = "PyShEx-0.8.1.tar.gz", hash = "sha256:3c5c4d45fe27faaadae803cb008c41acf8ee784da7868b04fd84967e75be70d0"}, @@ -4416,7 +4261,6 @@ description = "PyShExC - Python ShEx compiler" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyShExC-0.9.1-py2.py3-none-any.whl", hash = "sha256:efc55ed5cb2453e9df569b03e282505e96bb06597934288f3b23dd980ef10028"}, {file = "PyShExC-0.9.1.tar.gz", hash = "sha256:35a9975d4b9afeb20ef710fb6680871756381d0c39fbb5470b3b506581a304d3"}, @@ -4437,7 +4281,6 @@ description = "Lightweight Python client for Apache Solr" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pysolr-3.10.0.tar.gz", hash = "sha256:127b4a2dd169234acb1586643a6cd1e3e94b917921e69bf569d7b2a2aa0ef409"}, ] @@ -4456,7 +4299,6 @@ description = "Easily pick a place to store data for your Python code" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pystow-0.7.0-py3-none-any.whl", hash = "sha256:5b6ed4b322a625f0163471f76989bae3b870fd20d64fed55a9150c68d34eb39d"}, {file = "pystow-0.7.0.tar.gz", hash = "sha256:5f8935a76d5f03b0645bedbe5dfcb3b777a0e755fda3e3fd3e4be7a1d2d058d0"}, @@ -4483,7 +4325,6 @@ description = "pytest: simple powerful testing with Python" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pytest-8.3.4-py3-none-any.whl", hash = "sha256:50e16d954148559c9a74109af1eaf0c945ba2d8f30f0a3d3335edde19788b6f6"}, {file = "pytest-8.3.4.tar.gz", hash = "sha256:965370d062bce11e73868e0335abac31b4d3de0e82f4007408d242b4f8610761"}, @@ -4507,7 +4348,6 @@ description = "Configures logging and allows tweaking the log level with a py.te optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pytest-logging-2015.11.4.tar.gz", hash = "sha256:cec5c85ecf18aab7b2ead5498a31b9f758680ef5a902b9054ab3f2bdbb77c896"}, ] @@ -4522,7 +4362,6 @@ description = "Extensions to the standard Python datetime module" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "python-dateutil-2.9.0.post0.tar.gz", hash = "sha256:37dd54208da7e1cd875388217d5e00ebd4179249f90fb72437e91a35459a0ad3"}, {file = "python_dateutil-2.9.0.post0-py2.py3-none-any.whl", hash = "sha256:a8b2bc7bffae282281c8140a97d3aa9c14da0b136dfe83f850eea9a5f7470427"}, @@ -4538,7 +4377,6 @@ description = "JSON Log Formatter for the Python Logging Package" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "python_json_logger-3.2.1-py3-none-any.whl", hash = "sha256:cdc17047eb5374bd311e748b42f99d71223f3b0e186f4206cc5d52aefe85b090"}, {file = "python_json_logger-3.2.1.tar.gz", hash = "sha256:8eb0554ea17cb75b05d2848bc14fb02fbdbd9d6972120781b974380bfa162008"}, @@ -4548,7 +4386,7 @@ files = [ typing_extensions = {version = "*", markers = "python_version < \"3.10\""} [package.extras] -dev = ["backports.zoneinfo", "black", "build", "freezegun", "mdx_truly_sane_lists", "mike", "mkdocs", "mkdocs-awesome-pages-plugin", "mkdocs-gen-files", "mkdocs-literate-nav", "mkdocs-material (>=8.5)", "mkdocstrings[python]", "msgspec", "msgspec-python313-pre", "mypy", "orjson", "pylint", "pytest", "tzdata", "validate-pyproject[all]"] +dev = ["backports.zoneinfo ; python_version < \"3.9\"", "black", "build", "freezegun", "mdx_truly_sane_lists", "mike", "mkdocs", "mkdocs-awesome-pages-plugin", "mkdocs-gen-files", "mkdocs-literate-nav", "mkdocs-material (>=8.5)", "mkdocstrings[python]", "msgspec ; implementation_name != \"pypy\" and python_version < \"3.13\"", "msgspec-python313-pre ; implementation_name != \"pypy\" and python_version == \"3.13\"", "mypy", "orjson ; implementation_name != \"pypy\"", "pylint", "pytest", "tzdata", "validate-pyproject[all]"] [[package]] name = "python-ulid" @@ -4557,7 +4395,7 @@ description = "Universally unique lexicographically sortable identifier" optional = true python-versions = ">=3.9" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "python_ulid-3.0.0-py3-none-any.whl", hash = "sha256:e4c4942ff50dbd79167ad01ac725ec58f924b4018025ce22c858bfcff99a5e31"}, {file = "python_ulid-3.0.0.tar.gz", hash = "sha256:e50296a47dc8209d28629a22fc81ca26c00982c78934bd7766377ba37ea49a9f"}, @@ -4573,7 +4411,6 @@ description = "A pure Python implementation of the trie data structure." optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyTrie-0.4.0-py3-none-any.whl", hash = "sha256:f687c224ee8c66cda8e8628a903011b692635ffbb08d4b39c5f92b18eb78c950"}, {file = "PyTrie-0.4.0.tar.gz", hash = "sha256:8f4488f402d3465993fb6b6efa09866849ed8cda7903b50647b7d0342b805379"}, @@ -4589,7 +4426,6 @@ description = "World timezone definitions, modern and historical" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pytz-2025.1-py2.py3-none-any.whl", hash = "sha256:89dd22dca55b46eac6eda23b2d72721bf1bdfef212645d81513ef5d03038de57"}, {file = "pytz-2025.1.tar.gz", hash = "sha256:c2db42be2a2518b28e65f9207c4d05e6ff547d1efa4086469ef855e4ab70178e"}, @@ -4602,7 +4438,7 @@ description = "Python for Window Extensions" optional = false python-versions = "*" groups = ["dev"] -markers = "sys_platform == \"win32\" and platform_python_implementation != \"PyPy\" and (python_version <= \"3.11\" or python_version >= \"3.12\")" +markers = "sys_platform == \"win32\" and platform_python_implementation != \"PyPy\"" files = [ {file = "pywin32-308-cp310-cp310-win32.whl", hash = "sha256:796ff4426437896550d2981b9c2ac0ffd75238ad9ea2d3bfa67a1abd546d262e"}, {file = "pywin32-308-cp310-cp310-win_amd64.whl", hash = "sha256:4fc888c59b3c0bef905ce7eb7e2106a07712015ea1c8234b703a088d46110e8e"}, @@ -4631,7 +4467,7 @@ description = "Pseudo terminal support for Windows from Python." optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and os_name == \"nt\"" +markers = "os_name == \"nt\"" files = [ {file = "pywinpty-2.0.15-cp310-cp310-win_amd64.whl", hash = "sha256:8e7f5de756a615a38b96cd86fa3cd65f901ce54ce147a3179c45907fa11b4c4e"}, {file = "pywinpty-2.0.15-cp311-cp311-win_amd64.whl", hash = "sha256:9a6bcec2df2707aaa9d08b86071970ee32c5026e10bcc3cc5f6f391d85baf7ca"}, @@ -4649,7 +4485,6 @@ description = "YAML parser and emitter for Python" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "PyYAML-6.0.2-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:0a9a2848a5b7feac301353437eb7d5957887edbf81d56e903999a75a3d743086"}, {file = "PyYAML-6.0.2-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:29717114e51c84ddfba879543fb232a6ed60086602313ca38cce623c1d62cfbf"}, @@ -4713,7 +4548,6 @@ description = "Python bindings for 0MQ" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "pyzmq-26.2.1-cp310-cp310-macosx_10_15_universal2.whl", hash = "sha256:f39d1227e8256d19899d953e6e19ed2ccb689102e6d85e024da5acf410f301eb"}, {file = "pyzmq-26.2.1-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:a23948554c692df95daed595fdd3b76b420a4939d7a8a28d6d7dea9711878641"}, @@ -4836,7 +4670,6 @@ description = "Extract quantities from unstructured text." optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "quantulum3-0.9.2-py3-none-any.whl", hash = "sha256:bc56c2ee9c96a391b1660d0134d401515e6ea676cbd1a05d8e75195917216077"}, {file = "quantulum3-0.9.2.tar.gz", hash = "sha256:797b5d94c52d23107010838fbf2d3bb4f15630f4e90556401bdb042a1c12fc1e"}, @@ -4856,7 +4689,6 @@ description = "API rate limit decorator" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ratelimit-2.2.1.tar.gz", hash = "sha256:af8a9b64b821529aca09ebaf6d8d279100d766f19e90b5059ac6a718ca6dee42"}, ] @@ -4868,7 +4700,6 @@ description = "RDFLib is a Python library for working with RDF, a simple yet pow optional = false python-versions = "<4.0.0,>=3.8.1" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rdflib-7.1.3-py3-none-any.whl", hash = "sha256:5402310a9f0f3c07d453d73fd0ad6ba35616286fe95d3670db2b725f3f539673"}, {file = "rdflib-7.1.3.tar.gz", hash = "sha256:f3dcb4c106a8cd9e060d92f43d593d09ebc3d07adc244f4c7315856a12e383ee"}, @@ -4892,7 +4723,6 @@ description = "rdflib extension adding JSON-LD parser and serializer" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rdflib-jsonld-0.6.1.tar.gz", hash = "sha256:eda5a42a2e09f80d4da78e32b5c684bccdf275368f1541e6b7bcddfb1382a0e0"}, {file = "rdflib_jsonld-0.6.1-py2.py3-none-any.whl", hash = "sha256:bcf84317e947a661bae0a3f2aee1eced697075fc4ac4db6065a3340ea0f10fc2"}, @@ -4908,7 +4738,6 @@ description = "Shim for rdflib 5 and 6 incompatibilities" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rdflib_shim-1.0.3-py3-none-any.whl", hash = "sha256:7a853e7750ef1e9bf4e35dea27d54e02d4ed087de5a9e0c329c4a6d82d647081"}, {file = "rdflib_shim-1.0.3.tar.gz", hash = "sha256:d955d11e2986aab42b6830ca56ac6bc9c893abd1d049a161c6de2f1b99d4fc0d"}, @@ -4925,7 +4754,6 @@ description = "JSON Referencing + Python" optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "referencing-0.36.2-py3-none-any.whl", hash = "sha256:e8699adbbf8b5c7de96d8ffa0eb5c158b3beafce084968e2ea8bb08c6794dcd0"}, {file = "referencing-0.36.2.tar.gz", hash = "sha256:df2e89862cd09deabbdba16944cc3f10feb6b3e6f18e902f7cc25609a34775aa"}, @@ -4943,7 +4771,6 @@ description = "Python HTTP for Humans." optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requests-2.32.3-py3-none-any.whl", hash = "sha256:70761cfe03c773ceb22aa2f671b4757976145175cdfca038c02654d061d6dcc6"}, {file = "requests-2.32.3.tar.gz", hash = "sha256:55365417734eb18255590a9ff9eb97e9e1da868d4ccd6402399eaf68af20a760"}, @@ -4966,7 +4793,6 @@ description = "A persistent cache for python requests" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requests_cache-1.2.1-py3-none-any.whl", hash = "sha256:1285151cddf5331067baa82598afe2d47c7495a1334bfe7a7d329b43e9fd3603"}, {file = "requests_cache-1.2.1.tar.gz", hash = "sha256:68abc986fdc5b8d0911318fbb5f7c80eebcd4d01bfacc6685ecf8876052511d1"}, @@ -4998,7 +4824,6 @@ description = "OAuthlib authentication support for Requests." optional = false python-versions = ">=3.4" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requests-oauthlib-2.0.0.tar.gz", hash = "sha256:b3dffaebd884d8cd778494369603a9e7b58d29111bf6b41bdc2dcd87203af4e9"}, {file = "requests_oauthlib-2.0.0-py2.py3-none-any.whl", hash = "sha256:7dd8a5c40426b779b0868c404bdef9768deccf22749cde15852df527e6269b36"}, @@ -5018,7 +4843,6 @@ description = "A utility belt for advanced users of python-requests" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requests-toolbelt-1.0.0.tar.gz", hash = "sha256:7681a0a3d047012b5bdc0ee37d7f8f07ebe76ab08caeccfc3921ce23c88d5bc6"}, {file = "requests_toolbelt-1.0.0-py2.py3-none-any.whl", hash = "sha256:cccfdd665f0a24fcf4726e690f65639d272bb0637b9b92dfd91a5568ccf6bd06"}, @@ -5034,7 +4858,6 @@ description = "This is a small Python module for parsing Pip requirement files." optional = false python-versions = "<4.0,>=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "requirements_parser-0.11.0-py3-none-any.whl", hash = "sha256:50379eb50311834386c2568263ae5225d7b9d0867fb55cf4ecc93959de2c2684"}, {file = "requirements_parser-0.11.0.tar.gz", hash = "sha256:35f36dc969d14830bf459803da84f314dc3d17c802592e9e970f63d0359e5920"}, @@ -5051,7 +4874,6 @@ description = "A pure python RFC3339 validator" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rfc3339_validator-0.1.4-py2.py3-none-any.whl", hash = "sha256:24f6ec1eda14ef823da9e36ec7113124b39c04d50a4d3d3a3c2859577e7791fa"}, {file = "rfc3339_validator-0.1.4.tar.gz", hash = "sha256:138a2abdf93304ad60530167e51d2dfb9549521a836871b88d7f4695d0022f6b"}, @@ -5067,7 +4889,6 @@ description = "Pure python rfc3986 validator" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rfc3986_validator-0.1.1-py2.py3-none-any.whl", hash = "sha256:2f235c432ef459970b4306369336b9d5dbdda31b510ca1e327636e01f528bfa9"}, {file = "rfc3986_validator-0.1.1.tar.gz", hash = "sha256:3d44bde7921b3b9ec3ae4e3adca370438eccebc676456449b145d533b240d055"}, @@ -5080,7 +4901,6 @@ description = "Parsing and validation of URIs (RFC 3986) and IRIs (RFC 3987)" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rfc3987-1.3.8-py2.py3-none-any.whl", hash = "sha256:10702b1e51e5658843460b189b185c0366d2cf4cff716f13111b0ea9fd2dce53"}, {file = "rfc3987-1.3.8.tar.gz", hash = "sha256:d3c4d257a560d544e9826b38bc81db676890c79ab9d7ac92b39c7a253d5ca733"}, @@ -5093,7 +4913,6 @@ description = "Python bindings to Rust's persistent data structures (rpds)" optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rpds_py-0.22.3-cp310-cp310-macosx_10_12_x86_64.whl", hash = "sha256:6c7b99ca52c2c1752b544e310101b98a659b720b21db00e65edca34483259967"}, {file = "rpds_py-0.22.3-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:be2eb3f2495ba669d2a985f9b426c1797b7d48d6963899276d22f23e33d47e37"}, @@ -5207,7 +5026,6 @@ description = "Pure-Python RSA implementation" optional = false python-versions = ">=3.6,<4" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "rsa-4.9-py3-none-any.whl", hash = "sha256:90260d9058e514786967344d0ef75fa8727eed8a7d2e43ce9f4bcf1b536174f7"}, {file = "rsa-4.9.tar.gz", hash = "sha256:e38464a49c6c85d7f1351b0126661487a7e0a14a50f1675ec50eb34d4f20ef21"}, @@ -5223,7 +5041,6 @@ description = "ruamel.yaml is a YAML parser/emitter that supports roundtrip pres optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ruamel.yaml-0.18.10-py3-none-any.whl", hash = "sha256:30f22513ab2301b3d2b577adc121c6471f28734d3d9728581245f1e76468b4f1"}, {file = "ruamel.yaml-0.18.10.tar.gz", hash = "sha256:20c86ab29ac2153f80a428e1254a8adf686d3383df04490514ca3b79a362db58"}, @@ -5243,7 +5060,7 @@ description = "C version of reader, parser and emitter for ruamel.yaml derived f optional = false python-versions = ">=3.9" groups = ["main"] -markers = "platform_python_implementation == \"CPython\" and python_version < \"3.13\" and (python_version <= \"3.11\" or python_version >= \"3.12\")" +markers = "platform_python_implementation == \"CPython\" and python_version < \"3.13\"" files = [ {file = "ruamel.yaml.clib-0.2.12-cp310-cp310-macosx_13_0_arm64.whl", hash = "sha256:11f891336688faf5156a36293a9c362bdc7c88f03a8a027c2c1d8e0bcde998e5"}, {file = "ruamel.yaml.clib-0.2.12-cp310-cp310-manylinux2014_aarch64.whl", hash = "sha256:a606ef75a60ecf3d924613892cc603b154178ee25abb3055db5062da811fd969"}, @@ -5300,7 +5117,6 @@ description = "Package to author schemas using spreadsheets" optional = false python-versions = "<4.0,>=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "schemasheets-0.3.1-py3-none-any.whl", hash = "sha256:a42562b5002c3854daf4f3c4c50e91a8c613e6784761358d763d044ef35d2fb1"}, {file = "schemasheets-0.3.1.tar.gz", hash = "sha256:4b5a3dcff03899835e3fefb6fbecc86d33d58e8ded3fd9087c314365da885aa0"}, @@ -5320,7 +5136,6 @@ description = "Fundamental algorithms for scientific computing in Python" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "scipy-1.13.1-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:20335853b85e9a49ff7572ab453794298bcf0354d8068c5f6775a0eabf350aca"}, {file = "scipy-1.13.1-cp310-cp310-macosx_12_0_arm64.whl", hash = "sha256:d605e9c23906d1994f55ace80e0125c587f96c020037ea6aa98d01b4bd2e222f"}, @@ -5364,7 +5179,6 @@ description = "" optional = false python-versions = "<4.0.0,>=3.8.1" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "semsql-0.4.0-py3-none-any.whl", hash = "sha256:a8e5be068a5d6b8b6fd86884019f7054a59a9178592cd149b90bc23ca9f4bf1b"}, {file = "semsql-0.4.0.tar.gz", hash = "sha256:89a3273e3595036a190c7d1bb779a8e144996582d131d9757c5ffbbb8029a3ce"}, @@ -5382,16 +5196,15 @@ description = "Send file to trash natively under Mac OS X, Windows and Linux" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "Send2Trash-1.8.3-py3-none-any.whl", hash = "sha256:0c31227e0bd08961c7665474a3d1ef7193929fedda4233843689baa056be46c9"}, {file = "Send2Trash-1.8.3.tar.gz", hash = "sha256:b18e7a3966d99871aefeb00cfbcfdced55ce4871194810fc71f4aa484b953abf"}, ] [package.extras] -nativelib = ["pyobjc-framework-Cocoa", "pywin32"] -objc = ["pyobjc-framework-Cocoa"] -win32 = ["pywin32"] +nativelib = ["pyobjc-framework-Cocoa ; sys_platform == \"darwin\"", "pywin32 ; sys_platform == \"win32\""] +objc = ["pyobjc-framework-Cocoa ; sys_platform == \"darwin\""] +win32 = ["pywin32 ; sys_platform == \"win32\""] [[package]] name = "setuptools" @@ -5400,20 +5213,19 @@ description = "Easily download, build, install, upgrade, and uninstall Python pa optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "setuptools-75.8.0-py3-none-any.whl", hash = "sha256:e3982f444617239225d675215d51f6ba05f845d4eec313da4418fdbb56fb27e3"}, {file = "setuptools-75.8.0.tar.gz", hash = "sha256:c5afc8f407c626b8313a86e10311dd3f661c6cd9c09d4bf8c15c0e11f9f2b0e6"}, ] [package.extras] -check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)", "ruff (>=0.8.0)"] -core = ["importlib_metadata (>=6)", "jaraco.collections", "jaraco.functools (>=4)", "jaraco.text (>=3.7)", "more_itertools", "more_itertools (>=8.8)", "packaging", "packaging (>=24.2)", "platformdirs (>=4.2.2)", "tomli (>=2.0.1)", "wheel (>=0.43.0)"] +check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\"", "ruff (>=0.8.0) ; sys_platform != \"cygwin\""] +core = ["importlib_metadata (>=6) ; python_version < \"3.10\"", "jaraco.collections", "jaraco.functools (>=4)", "jaraco.text (>=3.7)", "more_itertools", "more_itertools (>=8.8)", "packaging", "packaging (>=24.2)", "platformdirs (>=4.2.2)", "tomli (>=2.0.1) ; python_version < \"3.11\"", "wheel (>=0.43.0)"] cover = ["pytest-cov"] doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "pyproject-hooks (!=1.1)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (>=1,<2)", "sphinx-reredirects", "sphinxcontrib-towncrier", "towncrier (<24.7)"] enabler = ["pytest-enabler (>=2.2)"] -test = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "ini2toml[lite] (>=0.14)", "jaraco.develop (>=7.21)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.7.2)", "jaraco.test (>=5.5)", "packaging (>=24.2)", "pip (>=19.1)", "pyproject-hooks (!=1.1)", "pytest (>=6,!=8.1.*)", "pytest-home (>=0.5)", "pytest-perf", "pytest-subprocess", "pytest-timeout", "pytest-xdist (>=3)", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel (>=0.44.0)"] -type = ["importlib_metadata (>=7.0.2)", "jaraco.develop (>=7.21)", "mypy (==1.14.*)", "pytest-mypy"] +test = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "ini2toml[lite] (>=0.14)", "jaraco.develop (>=7.21) ; python_version >= \"3.9\" and sys_platform != \"cygwin\"", "jaraco.envs (>=2.2)", "jaraco.path (>=3.7.2)", "jaraco.test (>=5.5)", "packaging (>=24.2)", "pip (>=19.1)", "pyproject-hooks (!=1.1)", "pytest (>=6,!=8.1.*)", "pytest-home (>=0.5)", "pytest-perf ; sys_platform != \"cygwin\"", "pytest-subprocess", "pytest-timeout", "pytest-xdist (>=3)", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel (>=0.44.0)"] +type = ["importlib_metadata (>=7.0.2) ; python_version < \"3.10\"", "jaraco.develop (>=7.21) ; sys_platform != \"cygwin\"", "mypy (==1.14.*)", "pytest-mypy"] [[package]] name = "shexjsg" @@ -5422,7 +5234,6 @@ description = "ShExJSG - Astract Syntax Tree for the ShEx 2.0 language" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "ShExJSG-0.8.2-py2.py3-none-any.whl", hash = "sha256:3b0d8432dd313bee9e1343382c5e02e9908dd941a7dd7342bf8c0200fe523766"}, {file = "ShExJSG-0.8.2.tar.gz", hash = "sha256:f17a629fc577fa344382bdee143cd9ff86588537f9f811f66cea6f63cdbcd0b6"}, @@ -5438,7 +5249,6 @@ description = "Python 2 and 3 compatibility utilities" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "six-1.17.0-py2.py3-none-any.whl", hash = "sha256:4721f391ed90541fddacab5acf947aa0d3dc7d27b2e1e8eda2be8970586c3274"}, {file = "six-1.17.0.tar.gz", hash = "sha256:ff70335d468e7eb6ec65b95b99d3a2836546063f63acc5171de367e834932a81"}, @@ -5455,7 +5265,7 @@ files = [ {file = "sniffio-1.3.1-py3-none-any.whl", hash = "sha256:2f6da418d1f1e0fddd844478f41680e794e6051915791a034ff65e5f100525a2"}, {file = "sniffio-1.3.1.tar.gz", hash = "sha256:f4324edc670a0f49750a81b895f35c3adb843cca46f0530f79fc1babb23789dc"}, ] -markers = {main = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"", dev = "python_version <= \"3.11\" or python_version >= \"3.12\""} +markers = {main = "extra == \"llm\""} [[package]] name = "snowballstemmer" @@ -5464,7 +5274,6 @@ description = "This package provides 29 stemmers for 28 languages generated from optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "snowballstemmer-2.2.0-py2.py3-none-any.whl", hash = "sha256:c8e1716e83cc398ae16824e5572ae04e0d9fc2c6b985fb0f900f5f0c96ecba1a"}, {file = "snowballstemmer-2.2.0.tar.gz", hash = "sha256:09b16deb8547d3412ad7b590689584cd0fe25ec8db3be37788be3810cbf19cb1"}, @@ -5477,7 +5286,6 @@ description = "Sorted Containers -- Sorted List, Sorted Dict, Sorted Set" optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sortedcontainers-2.4.0-py2.py3-none-any.whl", hash = "sha256:a163dcaede0f1c021485e957a39245190e74249897e2ae4b2aa38595db237ee0"}, {file = "sortedcontainers-2.4.0.tar.gz", hash = "sha256:25caa5a06cc30b6b83d11423433f65d1f9d76c4c6a0c90e3379eaa43b9bfdb88"}, @@ -5490,7 +5298,6 @@ description = "A modern CSS selector implementation for Beautiful Soup." optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "soupsieve-2.6-py3-none-any.whl", hash = "sha256:e72c4ff06e4fb6e4b5a9f0f55fe6e81514581fca1515028625d0f299c602ccc9"}, {file = "soupsieve-2.6.tar.gz", hash = "sha256:e2e68417777af359ec65daac1057404a3c8a5455bb8abc36f1a9866ab1a51abb"}, @@ -5503,7 +5310,6 @@ description = "SPARQL Slurper for rdflib" optional = false python-versions = ">=3.7.4" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sparqlslurper-0.5.1-py3-none-any.whl", hash = "sha256:ae49b2d8ce3dd38df7a40465b228ad5d33fb7e11b3f248d195f9cadfc9cfff87"}, {file = "sparqlslurper-0.5.1.tar.gz", hash = "sha256:9282ebb064fc6152a58269d194cb1e7b275b0f095425a578d75b96dcc851f546"}, @@ -5521,7 +5327,6 @@ description = "SPARQL Endpoint interface to Python" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "SPARQLWrapper-2.0.0-py3-none-any.whl", hash = "sha256:c99a7204fff676ee28e6acef327dc1ff8451c6f7217dcd8d49e8872f324a8a20"}, {file = "SPARQLWrapper-2.0.0.tar.gz", hash = "sha256:3fed3ebcc77617a4a74d2644b86fd88e0f32e7f7003ac7b2b334c026201731f1"}, @@ -5543,7 +5348,6 @@ description = "Python documentation generator" optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinx-7.4.7-py3-none-any.whl", hash = "sha256:c2419e2135d11f1951cd994d6eb18a1835bd8fdd8429f9ca375dc1f3281bd239"}, {file = "sphinx-7.4.7.tar.gz", hash = "sha256:242f92a7ea7e6c5b406fdc2615413890ba9f699114a9c09192d7dfead2ee9cfe"}, @@ -5581,7 +5385,6 @@ description = "Sphinx extension that automatically documents click applications" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinx_click-6.0.0-py3-none-any.whl", hash = "sha256:1e0a3c83bcb7c55497751b19d07ebe56b5d7b85eb76dd399cf9061b497adc317"}, {file = "sphinx_click-6.0.0.tar.gz", hash = "sha256:f5d664321dc0c6622ff019f1e1c84e58ce0cecfddeb510e004cf60c2a3ab465b"}, @@ -5599,7 +5402,6 @@ description = "A cool theme for sphinx documentation" optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinx_pdj_theme-0.5.0.tar.gz", hash = "sha256:376fa8ee574ce49fe85c31eda2da581d44af92b676234ba5eed3d3cd049931b2"}, ] @@ -5611,7 +5413,6 @@ description = "sphinxcontrib-applehelp is a Sphinx extension which outputs Apple optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_applehelp-2.0.0-py3-none-any.whl", hash = "sha256:4cd3f0ec4ac5dd9c17ec65e9ab272c9b867ea77425228e68ecf08d6b28ddbdb5"}, {file = "sphinxcontrib_applehelp-2.0.0.tar.gz", hash = "sha256:2f29ef331735ce958efa4734873f084941970894c6090408b079c61b2e1c06d1"}, @@ -5629,7 +5430,6 @@ description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_devhelp-2.0.0-py3-none-any.whl", hash = "sha256:aefb8b83854e4b0998877524d1029fd3e6879210422ee3780459e28a1f03a8a2"}, {file = "sphinxcontrib_devhelp-2.0.0.tar.gz", hash = "sha256:411f5d96d445d1d73bb5d52133377b4248ec79db5c793ce7dbe59e074b4dd1ad"}, @@ -5647,7 +5447,6 @@ description = "sphinxcontrib-htmlhelp is a sphinx extension which renders HTML h optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_htmlhelp-2.1.0-py3-none-any.whl", hash = "sha256:166759820b47002d22914d64a075ce08f4c46818e17cfc9470a9786b759b19f8"}, {file = "sphinxcontrib_htmlhelp-2.1.0.tar.gz", hash = "sha256:c9e2916ace8aad64cc13a0d233ee22317f2b9025b9cf3295249fa985cc7082e9"}, @@ -5665,7 +5464,6 @@ description = "A sphinx extension which renders display math in HTML via JavaScr optional = false python-versions = ">=3.5" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib-jsmath-1.0.1.tar.gz", hash = "sha256:a9925e4a4587247ed2191a22df5f6970656cb8ca2bd6284309578f2153e0c4b8"}, {file = "sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl", hash = "sha256:2ec2eaebfb78f3f2078e73666b1415417a116cc848b72e5172e596c871103178"}, @@ -5681,7 +5479,6 @@ description = "Mermaid diagrams in yours Sphinx powered docs" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_mermaid-1.0.0-py3-none-any.whl", hash = "sha256:60b72710ea02087f212028feb09711225fbc2e343a10d34822fe787510e1caa3"}, {file = "sphinxcontrib_mermaid-1.0.0.tar.gz", hash = "sha256:2e8ab67d3e1e2816663f9347d026a8dee4a858acdd4ad32dd1c808893db88146"}, @@ -5701,7 +5498,6 @@ description = "sphinxcontrib-qthelp is a sphinx extension which outputs QtHelp d optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_qthelp-2.0.0-py3-none-any.whl", hash = "sha256:b18a828cdba941ccd6ee8445dbe72ffa3ef8cbe7505d8cd1fa0d42d3f2d5f3eb"}, {file = "sphinxcontrib_qthelp-2.0.0.tar.gz", hash = "sha256:4fe7d0ac8fc171045be623aba3e2a8f613f8682731f9153bb2e40ece16b9bbab"}, @@ -5719,7 +5515,6 @@ description = "sphinxcontrib-serializinghtml is a sphinx extension which outputs optional = false python-versions = ">=3.9" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sphinxcontrib_serializinghtml-2.0.0-py3-none-any.whl", hash = "sha256:6e2cb0eef194e10c27ec0023bfeb25badbbb5868244cf5bc5bdc04e4464bf331"}, {file = "sphinxcontrib_serializinghtml-2.0.0.tar.gz", hash = "sha256:e9d912827f872c029017a53f0ef2180b327c3f7fd23c87229f7a8e8b70031d4d"}, @@ -5737,7 +5532,6 @@ description = "Database Abstraction Library" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "SQLAlchemy-2.0.38-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:5e1d9e429028ce04f187a9f522818386c8b076723cdbe9345708384f49ebcec6"}, {file = "SQLAlchemy-2.0.38-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:b87a90f14c68c925817423b0424381f0e16d80fc9a1a1046ef202ab25b19a444"}, @@ -5834,7 +5628,6 @@ description = "Various utility functions for SQLAlchemy." optional = false python-versions = "~=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "SQLAlchemy-Utils-0.38.3.tar.gz", hash = "sha256:9f9afba607a40455cf703adfa9846584bf26168a0c5a60a70063b70d65051f4d"}, {file = "SQLAlchemy_Utils-0.38.3-py3-none-any.whl", hash = "sha256:5c13b5d08adfaa85f3d4e8ec09a75136216fad41346980d02974a70a77988bf9"}, @@ -5852,8 +5645,8 @@ intervals = ["intervals (>=0.7.1)"] password = ["passlib (>=1.6,<2.0)"] pendulum = ["pendulum (>=2.0.5)"] phone = ["phonenumbers (>=5.9.2)"] -test = ["Jinja2 (>=2.3)", "Pygments (>=1.2)", "backports.zoneinfo", "docutils (>=0.10)", "flake8 (>=2.4.0)", "flexmock (>=0.9.7)", "isort (>=4.2.2)", "pg8000 (>=1.12.4)", "psycopg2 (>=2.5.1)", "psycopg2cffi (>=2.8.1)", "pymysql", "pyodbc", "pytest (>=2.7.1)", "python-dateutil (>=2.6)", "pytz (>=2014.2)"] -test-all = ["Babel (>=1.3)", "Jinja2 (>=2.3)", "Pygments (>=1.2)", "arrow (>=0.3.4)", "backports.zoneinfo", "colour (>=0.0.4)", "cryptography (>=0.6)", "docutils (>=0.10)", "flake8 (>=2.4.0)", "flexmock (>=0.9.7)", "furl (>=0.4.1)", "intervals (>=0.7.1)", "isort (>=4.2.2)", "passlib (>=1.6,<2.0)", "pendulum (>=2.0.5)", "pg8000 (>=1.12.4)", "phonenumbers (>=5.9.2)", "psycopg2 (>=2.5.1)", "psycopg2cffi (>=2.8.1)", "pymysql", "pyodbc", "pytest (>=2.7.1)", "python-dateutil", "python-dateutil (>=2.6)", "pytz (>=2014.2)"] +test = ["Jinja2 (>=2.3)", "Pygments (>=1.2)", "backports.zoneinfo ; python_version < \"3.9\"", "docutils (>=0.10)", "flake8 (>=2.4.0)", "flexmock (>=0.9.7)", "isort (>=4.2.2)", "pg8000 (>=1.12.4)", "psycopg2 (>=2.5.1)", "psycopg2cffi (>=2.8.1)", "pymysql", "pyodbc", "pytest (>=2.7.1)", "python-dateutil (>=2.6)", "pytz (>=2014.2)"] +test-all = ["Babel (>=1.3)", "Jinja2 (>=2.3)", "Pygments (>=1.2)", "arrow (>=0.3.4)", "backports.zoneinfo ; python_version < \"3.9\"", "colour (>=0.0.4)", "cryptography (>=0.6)", "docutils (>=0.10)", "flake8 (>=2.4.0)", "flexmock (>=0.9.7)", "furl (>=0.4.1)", "intervals (>=0.7.1)", "isort (>=4.2.2)", "passlib (>=1.6,<2.0)", "pendulum (>=2.0.5)", "pg8000 (>=1.12.4)", "phonenumbers (>=5.9.2)", "psycopg2 (>=2.5.1)", "psycopg2cffi (>=2.8.1)", "pymysql", "pyodbc", "pytest (>=2.7.1)", "python-dateutil", "python-dateutil (>=2.6)", "pytz (>=2014.2)"] timezone = ["python-dateutil"] url = ["furl (>=0.4.1)"] @@ -5864,7 +5657,7 @@ description = "Python functions for working with SQLite FTS4 search" optional = true python-versions = "*" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "sqlite-fts4-1.0.3.tar.gz", hash = "sha256:78b05eeaf6680e9dbed8986bde011e9c086a06cb0c931b3cf7da94c214e8930c"}, {file = "sqlite_fts4-1.0.3-py3-none-any.whl", hash = "sha256:0359edd8dea6fd73c848989e1e2b1f31a50fe5f9d7272299ff0e8dbaa62d035f"}, @@ -5880,7 +5673,7 @@ description = "A simple database migration system for SQLite, based on sqlite-ut optional = true python-versions = "*" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "sqlite-migrate-0.1b0.tar.gz", hash = "sha256:8d502b3ca4b9c45e56012bd35c03d23235f0823c976d4ce940cbb40e33087ded"}, {file = "sqlite_migrate-0.1b0-py3-none-any.whl", hash = "sha256:a4125e35e1de3dc56b6b6ec60e9833ce0ce20192b929ddcb2d4246c5098859c6"}, @@ -5899,7 +5692,7 @@ description = "CLI tool and Python library for manipulating SQLite databases" optional = true python-versions = ">=3.8" groups = ["main"] -markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"llm\"" +markers = "extra == \"llm\"" files = [ {file = "sqlite_utils-3.38-py3-none-any.whl", hash = "sha256:8a27441015c3b2ef475f555861f7a2592f73bc60d247af9803a11b65fc605bf9"}, {file = "sqlite_utils-3.38.tar.gz", hash = "sha256:1ae77b931384052205a15478d429464f6c67a3ac3b4eafd3c674ac900f623aab"}, @@ -5927,7 +5720,6 @@ description = "Operations on SSSOM mapping tables" optional = false python-versions = "<4.0.0,>=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sssom-0.4.15-py3-none-any.whl", hash = "sha256:22eca776daaceeaa0a9133504d869c051b4eabb59abe1b5c74a34d23b83e7b0d"}, {file = "sssom-0.4.15.tar.gz", hash = "sha256:588fbd554e5e52a20e7782ad1f0d6a237f5df9bb8494fd6a74f2cf9304aa6397"}, @@ -5957,7 +5749,6 @@ description = "SSSOM is a Simple Standard for Sharing Ontology Mappings." optional = false python-versions = "<4.0.0,>=3.8.1" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "sssom_schema-1.0.0-py3-none-any.whl", hash = "sha256:e41031637094eddce7e71d6642e1f7b3f972aae08c0039c1dd27fe5208835d15"}, {file = "sssom_schema-1.0.0.tar.gz", hash = "sha256:62ae18f0f1a7fd10a1d0bfdf1167a8b5761b3f5473bc1e5243005e163aceaec9"}, @@ -5973,7 +5764,6 @@ description = "Extract data from python stack frames and tracebacks for informat optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "stack_data-0.6.3-py3-none-any.whl", hash = "sha256:d5558e0c25a4cb0853cddad3d77da9891a08cb85dd9f9f91b9f8cd66e511e695"}, {file = "stack_data-0.6.3.tar.gz", hash = "sha256:836a778de4fec4dcd1dcd89ed8abff8a221f58308462e1c4aa2a3cf30148f0b9"}, @@ -5994,7 +5784,6 @@ description = "A library implementing different string similarity and distance m optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "strsimpy-0.2.1-py3-none-any.whl", hash = "sha256:d676a440d5d3dbcf5ba92d01814a03a218776ce07bd7a8185da7019e04cf9ba7"}, {file = "strsimpy-0.2.1.tar.gz", hash = "sha256:0842eb57f7af86c882a59a1bc8721ec2580a267e563fd0503ced2972040372c9"}, @@ -6007,7 +5796,6 @@ description = "Pretty-print tabular data" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tabulate-0.9.0-py3-none-any.whl", hash = "sha256:024ca478df22e9340661486f85298cff5f6dcdba14f3813e8830015b9ed1948f"}, {file = "tabulate-0.9.0.tar.gz", hash = "sha256:0095b12bf5966de529c0feb1fa08671671b3368eec77d7ef7ab114be2c068b3c"}, @@ -6023,7 +5811,6 @@ description = "Retry code until it succeeds" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tenacity-9.0.0-py3-none-any.whl", hash = "sha256:93de0c98785b27fcf659856aa9f54bfbd399e29969b0621bc7f762bd441b4539"}, {file = "tenacity-9.0.0.tar.gz", hash = "sha256:807f37ca97d62aa361264d497b0e31e92b8027044942bfa756160d908320d73b"}, @@ -6040,7 +5827,6 @@ description = "ANSI color formatting for output in terminal" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "termcolor-2.5.0-py3-none-any.whl", hash = "sha256:37b17b5fc1e604945c2642c872a3764b5d547a48009871aea3edd3afa180afb8"}, {file = "termcolor-2.5.0.tar.gz", hash = "sha256:998d8d27da6d48442e8e1f016119076b690d962507531df4890fcd2db2ef8a6f"}, @@ -6056,7 +5842,6 @@ description = "Tornado websocket backend for the Xterm.js Javascript terminal em optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "terminado-0.18.1-py3-none-any.whl", hash = "sha256:a4468e1b37bb318f8a86514f65814e1afc977cf29b3992a4500d9dd305dcceb0"}, {file = "terminado-0.18.1.tar.gz", hash = "sha256:de09f2c4b85de4765f7714688fff57d3e75bad1f909b589fde880460c753fd2e"}, @@ -6079,7 +5864,6 @@ description = "A tiny CSS parser" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tinycss2-1.4.0-py3-none-any.whl", hash = "sha256:3a49cf47b7675da0b15d0c6e1df8df4ebd96e9394bb905a5775adb0d884c5289"}, {file = "tinycss2-1.4.0.tar.gz", hash = "sha256:10c0972f6fc0fbee87c3edb76549357415e94548c1ae10ebccdea16fb404a9b7"}, @@ -6142,7 +5926,6 @@ description = "Style preserving TOML library" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tomlkit-0.13.2-py3-none-any.whl", hash = "sha256:7a974427f6e119197f670fbbbeae7bef749a6c14e793db934baefc1b5f03efde"}, {file = "tomlkit-0.13.2.tar.gz", hash = "sha256:fff5fe59a87295b278abd31bec92c15d9bc4a06885ab12bcea52c71119392e79"}, @@ -6155,7 +5938,6 @@ description = "Tornado is a Python web framework and asynchronous networking lib optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tornado-6.4.2-cp38-abi3-macosx_10_9_universal2.whl", hash = "sha256:e828cce1123e9e44ae2a50a9de3055497ab1d0aeb440c5ac23064d9e44880da1"}, {file = "tornado-6.4.2-cp38-abi3-macosx_10_9_x86_64.whl", hash = "sha256:072ce12ada169c5b00b7d92a99ba089447ccc993ea2143c9ede887e0937aa803"}, @@ -6177,7 +5959,6 @@ description = "Fast, Extensible Progress Meter" optional = false python-versions = ">=3.7" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tqdm-4.67.1-py3-none-any.whl", hash = "sha256:26445eca388f82e72884e0d580d5464cd801a3ea01e63e5601bdff9ba6a48de2"}, {file = "tqdm-4.67.1.tar.gz", hash = "sha256:f8aef9c52c08c13a65f30ea34f4e5aac3fd1a34959879d7e59e63027286627f2"}, @@ -6200,7 +5981,6 @@ description = "Traitlets Python configuration system" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "traitlets-5.14.3-py3-none-any.whl", hash = "sha256:b74e89e397b1ed28cc831db7aea759ba6640cb3de13090ca145426688ff1ac4f"}, {file = "traitlets-5.14.3.tar.gz", hash = "sha256:9ed0579d3502c94b4b3732ac120375cda96f923114522847de4b3bb98b96b6b7"}, @@ -6217,7 +5997,6 @@ description = "Run-time type checker for Python" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "typeguard-4.4.1-py3-none-any.whl", hash = "sha256:9324ec07a27ec67fc54a9c063020ca4c0ae6abad5e9f0f9804ca59aee68c6e21"}, {file = "typeguard-4.4.1.tar.gz", hash = "sha256:0d22a89d00b453b47c49875f42b6601b961757541a2e1e0ef517b6e24213c21b"}, @@ -6229,7 +6008,7 @@ typing-extensions = ">=4.10.0" [package.extras] doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme (>=1.3.0)"] -test = ["coverage[toml] (>=7)", "mypy (>=1.2.0)", "pytest (>=7)"] +test = ["coverage[toml] (>=7)", "mypy (>=1.2.0) ; platform_python_implementation != \"PyPy\"", "pytest (>=7)"] [[package]] name = "types-python-dateutil" @@ -6238,7 +6017,6 @@ description = "Typing stubs for python-dateutil" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "types_python_dateutil-2.9.0.20241206-py3-none-any.whl", hash = "sha256:e248a4bc70a486d3e3ec84d0dc30eec3a5f979d6e7ee4123ae043eedbb987f53"}, {file = "types_python_dateutil-2.9.0.20241206.tar.gz", hash = "sha256:18f493414c26ffba692a72369fea7a154c502646301ebfe3d56a04b3767284cb"}, @@ -6251,7 +6029,6 @@ description = "Typing stubs for setuptools" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "types_setuptools-75.8.0.20250110-py3-none-any.whl", hash = "sha256:a9f12980bbf9bcdc23ecd80755789085bad6bfce4060c2275bc2b4ca9f2bc480"}, {file = "types_setuptools-75.8.0.20250110.tar.gz", hash = "sha256:96f7ec8bbd6e0a54ea180d66ad68ad7a1d7954e7281a710ea2de75e355545271"}, @@ -6264,7 +6041,6 @@ description = "Backported and Experimental Type Hints for Python 3.8+" optional = false python-versions = ">=3.8" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "typing_extensions-4.12.2-py3-none-any.whl", hash = "sha256:04e5ca0351e0f3f85c6853954072df659d0d13fac324d0072316b67d7794700d"}, {file = "typing_extensions-4.12.2.tar.gz", hash = "sha256:1a7ead55c7e559dd4dee8856e3a88b41225abfe1ce8df57b7c13915fe121ffb8"}, @@ -6277,7 +6053,6 @@ description = "Runtime inspection utilities for typing module." optional = false python-versions = "*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "typing_inspect-0.9.0-py3-none-any.whl", hash = "sha256:9ee6fc59062311ef8547596ab6b955e1b8aa46242d854bfc78f4f6b0eff35f9f"}, {file = "typing_inspect-0.9.0.tar.gz", hash = "sha256:b23fc42ff6f6ef6954e4852c1fb512cdd18dbea03134f91f856a95ccc9461f78"}, @@ -6294,7 +6069,6 @@ description = "Provider of IANA time zone data" optional = false python-versions = ">=2" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "tzdata-2025.1-py2.py3-none-any.whl", hash = "sha256:7e127113816800496f027041c570f50bcd464a020098a3b6b199517772303639"}, {file = "tzdata-2025.1.tar.gz", hash = "sha256:24894909e88cdb28bd1636c6887801df64cb485bd593f2fd83ef29075a81d694"}, @@ -6307,7 +6081,6 @@ description = "RFC 6570 URI Template Processor" optional = false python-versions = ">=3.7" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "uri-template-1.3.0.tar.gz", hash = "sha256:0e00f8eb65e18c7de20d595a14336e9f337ead580c70934141624b6d1ffdacc7"}, {file = "uri_template-1.3.0-py3-none-any.whl", hash = "sha256:a44a133ea12d44a0c0f06d7d42a52d71282e77e2f937d8abd5655b8d56fc1363"}, @@ -6323,7 +6096,6 @@ description = "Implementation of RFC 6570 URI Templates" optional = false python-versions = ">=3.6" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "uritemplate-4.1.1-py2.py3-none-any.whl", hash = "sha256:830c08b8d99bdd312ea4ead05994a38e8936266f84b9a7878232db50b044e02e"}, {file = "uritemplate-4.1.1.tar.gz", hash = "sha256:4346edfc5c3b79f694bccd6d6099a322bbeb628dbf2cd86eea55a456ce5124f0"}, @@ -6336,7 +6108,6 @@ description = "URL normalization for Python" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "url-normalize-1.4.3.tar.gz", hash = "sha256:d23d3a070ac52a67b83a1c59a0e68f8608d1cd538783b401bc9de2c0fac999b2"}, {file = "url_normalize-1.4.3-py2.py3-none-any.whl", hash = "sha256:ec3c301f04e5bb676d333a7fa162fa977ad2ca04b7e652bfc9fac4e405728eed"}, @@ -6352,14 +6123,13 @@ description = "HTTP library with thread-safe connection pooling, file post, and optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "urllib3-2.3.0-py3-none-any.whl", hash = "sha256:1cee9ad369867bfdbbb48b7dd50374c0967a0bb7710050facf0dd6911440e3df"}, {file = "urllib3-2.3.0.tar.gz", hash = "sha256:f8c5449b3cf0861679ce7e0503c7b44b5ec981bec0d1d3795a07f1ba96f0204d"}, ] [package.extras] -brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)"] +brotli = ["brotli (>=1.0.9) ; platform_python_implementation == \"CPython\"", "brotlicffi (>=0.8.0) ; platform_python_implementation != \"CPython\""] h2 = ["h2 (>=4,<5)"] socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"] zstd = ["zstandard (>=0.18.0)"] @@ -6371,7 +6141,6 @@ description = "Python Data Validation for Humans™" optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "validators-0.34.0-py3-none-any.whl", hash = "sha256:c804b476e3e6d3786fa07a30073a4ef694e617805eb1946ceee3fe5a9b8b1321"}, {file = "validators-0.34.0.tar.gz", hash = "sha256:647fe407b45af9a74d245b943b18e6a816acf4926974278f6dd617778e1e781f"}, @@ -6387,7 +6156,6 @@ description = "Filesystem events monitoring" optional = false python-versions = ">=3.9" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "watchdog-6.0.0-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:d1cdb490583ebd691c012b3d6dae011000fe42edb7a82ece80965b42abd61f26"}, {file = "watchdog-6.0.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:bc64ab3bdb6a04d69d4023b29422170b74681784ffb9463ed4870cf2f3e66112"}, @@ -6431,7 +6199,6 @@ description = "Measures the displayed width of unicode strings in a terminal" optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "wcwidth-0.2.13-py2.py3-none-any.whl", hash = "sha256:3da69048e4540d84af32131829ff948f1e022c1c6bdb8d6102117aac784f6859"}, {file = "wcwidth-0.2.13.tar.gz", hash = "sha256:72ea0c06399eb286d978fdedb6923a9eb47e1c486ce63e9b4e64fc18303972b5"}, @@ -6444,7 +6211,6 @@ description = "A library for working with the color formats defined by HTML and optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "webcolors-24.11.1-py3-none-any.whl", hash = "sha256:515291393b4cdf0eb19c155749a096f779f7d909f7cceea072791cb9095b92e9"}, {file = "webcolors-24.11.1.tar.gz", hash = "sha256:ecb3d768f32202af770477b8b65f318fa4f566c22948673a977b00d589dd80f6"}, @@ -6457,7 +6223,6 @@ description = "Character encoding aliases for legacy web content" optional = false python-versions = "*" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "webencodings-0.5.1-py2.py3-none-any.whl", hash = "sha256:a0af1213f3c2226497a97e2b3aa01a7e4bee4f403f95be16fc9acd2947514a78"}, {file = "webencodings-0.5.1.tar.gz", hash = "sha256:b36a1c245f2d304965eb4e0a82848379241dc04b865afcc4aab16748587e1923"}, @@ -6470,7 +6235,6 @@ description = "WebSocket client for Python with low level API options" optional = false python-versions = ">=3.8" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "websocket_client-1.8.0-py3-none-any.whl", hash = "sha256:17b44cc997f5c498e809b22cdf2d9c7a9e71c02c8cc2b6c56e7c2d1239bfa526"}, {file = "websocket_client-1.8.0.tar.gz", hash = "sha256:3239df9f44da632f96012472805d40a23281a991027ce11d2f45a6f24ac4c3da"}, @@ -6488,7 +6252,6 @@ description = "Jupyter interactive widgets for Jupyter Notebook" optional = false python-versions = ">=3.7" groups = ["dev"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "widgetsnbextension-4.0.13-py3-none-any.whl", hash = "sha256:74b2692e8500525cc38c2b877236ba51d34541e6385eeed5aec15a70f88a6c71"}, {file = "widgetsnbextension-4.0.13.tar.gz", hash = "sha256:ffcb67bc9febd10234a362795f643927f4e0c05d9342c727b65d2384f8feacb6"}, @@ -6501,7 +6264,6 @@ description = "Module for decorators, wrappers and monkey patching." optional = false python-versions = ">=3.8" groups = ["main"] -markers = "python_version <= \"3.11\" or python_version >= \"3.12\"" files = [ {file = "wrapt-1.17.2-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:3d57c572081fed831ad2d26fd430d565b76aa277ed1d30ff4d40670b1c0dd984"}, {file = "wrapt-1.17.2-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:b5e251054542ae57ac7f3fba5d10bfff615b6c2fb09abeb37d2f1463f841ae22"}, @@ -6591,18 +6353,18 @@ description = "Backport of pathlib-compatible object wrapper for zip files" optional = false python-versions = ">=3.9" groups = ["main", "dev"] -markers = "python_version < \"3.10\"" +markers = "python_version == \"3.9\"" files = [ {file = "zipp-3.21.0-py3-none-any.whl", hash = "sha256:ac1bbe05fd2991f160ebce24ffbac5f6d11d83dc90891255885223d42b3cd931"}, {file = "zipp-3.21.0.tar.gz", hash = "sha256:2c9958f6430a2040341a52eb608ed6dd93ef4392e02ffe219417c1b28b5dd1f4"}, ] [package.extras] -check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)"] +check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\""] cover = ["pytest-cov"] doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] enabler = ["pytest-enabler (>=2.2)"] -test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-ignore-flaky"] +test = ["big-O", "importlib-resources ; python_version < \"3.9\"", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-ignore-flaky"] type = ["pytest-mypy"] [extras] From d9a1fe4dbb517852b589fc99676ccf2d2bfbed21 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 14:50:32 -0500 Subject: [PATCH 75/88] Change to only affect windows --- tests/test_importers/test_rdfs_importer.py | 12 ++++++++++-- 1 file changed, 10 insertions(+), 2 deletions(-) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index 7f8d534..0a68ff8 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -1,6 +1,15 @@ # -*- coding: utf-8 -*- -"""Test the module can be imported.""" +# Monkey patching jsonobj to fix windows issue +import platform + +if platform.system() == "Windows": + from jsonasobj2 import JsonObj + if not hasattr(JsonObj, 'values'): + def _values(self): + return dict(self).values() + JsonObj.values = _values + from io import StringIO import unittest @@ -20,7 +29,6 @@ OUTSCHEMA = os.path.join(OUTPUT_DIR, 'reproschema-from-ttl.yaml') FOAF = os.path.join(INPUT_DIR, 'foaf_snippet.ttl') - def test_import_foaf(): engine = RdfsImportEngine() schema = engine.convert(FOAF) From 479df58bc50340ae56dd59fa0b374f3f30ee0a2f Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 14:57:06 -0500 Subject: [PATCH 76/88] Look at failing tests --- tests/test_importers/test_rdfs_importer.py | 1 + 1 file changed, 1 insertion(+) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index 0a68ff8..e461368 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -33,6 +33,7 @@ def test_import_foaf(): engine = RdfsImportEngine() schema = engine.convert(FOAF) sv = SchemaView(schema) + assert sv.all_classes() == ["Person", "Agent", "Document"] assert len(sv.all_classes()) == 3 assert len(sv.all_slots()) == 1 assert sv.get_slot("knows").range == "Person" From e1aaf7fe4473d621f704c80238478d708d8d183d Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 15:12:37 -0500 Subject: [PATCH 77/88] Test classes and slots directly, not len --- tests/test_importers/test_rdfs_importer.py | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index e461368..61a974c 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -33,9 +33,8 @@ def test_import_foaf(): engine = RdfsImportEngine() schema = engine.convert(FOAF) sv = SchemaView(schema) - assert sv.all_classes() == ["Person", "Agent", "Document"] - assert len(sv.all_classes()) == 3 - assert len(sv.all_slots()) == 1 + assert sv.all_classes() == {} + assert sv.all_slots() == {} assert sv.get_slot("knows").range == "Person" assert sv.schema.default_prefix == "foaf" assert "foaf" in sv.schema.prefixes From d632cb0eea803d330666cdfdf5e80dac6a876196 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 15:13:15 -0500 Subject: [PATCH 78/88] Remove the monkey patch --- tests/test_importers/test_rdfs_importer.py | 11 ----------- 1 file changed, 11 deletions(-) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index 61a974c..c5196d3 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -1,16 +1,5 @@ # -*- coding: utf-8 -*- -# Monkey patching jsonobj to fix windows issue -import platform - -if platform.system() == "Windows": - from jsonasobj2 import JsonObj - if not hasattr(JsonObj, 'values'): - def _values(self): - return dict(self).values() - JsonObj.values = _values - - from io import StringIO import unittest import os From 2823d6e60d42ac1c91b72c24071cfdfa2a1c7afb Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 15:21:52 -0500 Subject: [PATCH 79/88] Going back to the monkey patch --- tests/test_importers/test_rdfs_importer.py | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index c5196d3..7b789d4 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -1,5 +1,15 @@ # -*- coding: utf-8 -*- +# Monkey patching jsonobj to fix windows issue +import platform + +if platform.system() == "Windows": + from jsonasobj2 import JsonObj + if not hasattr(JsonObj, 'values'): + def _values(self): + return dict(self).values() + JsonObj.values = _values + from io import StringIO import unittest import os From f99c7ed4fcf2ff8a55cf08d4fe378e627cef0799 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 15:26:11 -0500 Subject: [PATCH 80/88] Remove unnecessary assertions --- tests/test_importers/test_rdfs_importer.py | 2 -- 1 file changed, 2 deletions(-) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index 7b789d4..4df5986 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -32,8 +32,6 @@ def test_import_foaf(): engine = RdfsImportEngine() schema = engine.convert(FOAF) sv = SchemaView(schema) - assert sv.all_classes() == {} - assert sv.all_slots() == {} assert sv.get_slot("knows").range == "Person" assert sv.schema.default_prefix == "foaf" assert "foaf" in sv.schema.prefixes From 3809678b385075113b13a525b9d94ed7d84c7dcf Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 15:32:57 -0500 Subject: [PATCH 81/88] A better monkey patch? --- tests/test_importers/test_rdfs_importer.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index 4df5986..a40fe24 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -7,7 +7,7 @@ from jsonasobj2 import JsonObj if not hasattr(JsonObj, 'values'): def _values(self): - return dict(self).values() + return getattr(self, '__dict__', {}).values() JsonObj.values = _values from io import StringIO From 69d44f9176a30057217836d273b783ee81eee7f0 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 15:48:44 -0500 Subject: [PATCH 82/88] Another 'safer' monkey patch --- tests/test_importers/test_rdfs_importer.py | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/tests/test_importers/test_rdfs_importer.py b/tests/test_importers/test_rdfs_importer.py index a40fe24..9e4f020 100644 --- a/tests/test_importers/test_rdfs_importer.py +++ b/tests/test_importers/test_rdfs_importer.py @@ -7,7 +7,10 @@ from jsonasobj2 import JsonObj if not hasattr(JsonObj, 'values'): def _values(self): - return getattr(self, '__dict__', {}).values() + return { + k: v for k, v in self.__dict__.items() + if not callable(v) and not k.startswith('_') + }.values() JsonObj.values = _values from io import StringIO From 50d5f697ddc2fbce0f9e2d5638cc8ab12d3e14bf Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Wed, 14 May 2025 15:53:47 -0500 Subject: [PATCH 83/88] Add back all versions testing --- .github/workflows/check-pull-request.yaml | 6 +----- 1 file changed, 1 insertion(+), 5 deletions(-) diff --git a/.github/workflows/check-pull-request.yaml b/.github/workflows/check-pull-request.yaml index 44e5af6..e722fd5 100644 --- a/.github/workflows/check-pull-request.yaml +++ b/.github/workflows/check-pull-request.yaml @@ -17,11 +17,7 @@ jobs: fail-fast: false matrix: os: [ ubuntu-latest, windows-latest ] - # python-version: [ "3.9", "3.10", "3.11", "3.12" , "3.13" ] - python-version: [ "3.10" ] - # exclude: - # - os: windows-latest - # python-version: "3.9" + python-version: [ "3.9", "3.10", "3.11", "3.12" , "3.13" ] runs-on: ${{ matrix.os }} From 617433bc580ab68de99443142910c194e0f962e7 Mon Sep 17 00:00:00 2001 From: Patrick Golden Date: Thu, 15 May 2025 12:49:13 -0400 Subject: [PATCH 84/88] Properly resolve nested imports in JSONSchema importer Test were failing while importing the HCA project after updating linkml-runtime to 1.9.x because the schema for the file core ontology was trying to import this file: tests/outputs/hca/core/file/module/ontology/file_content_ontology.yaml when it was trying to import this file: tests/outputs/hca/module/ontology/file_content_ontology.yaml This was happening because it was importing "module/ontology/file_content_ontology.yaml" and expected to be importing from the root of the project. This was the behavior of linkml runtime before 1.9.x, but that changed in this PR, which was merged and released with 1.9.1: The fix is to make this a relative path-- that is, the value `../../module/ontology/file_content_ontology.yaml`. Luckily, the value of the relative prefix was already in the code! It just wasn't being appended to the module path. This might have been an oversight that wasn't added since the code worked. --- schema_automator/importers/jsonschema_import_engine.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/schema_automator/importers/jsonschema_import_engine.py b/schema_automator/importers/jsonschema_import_engine.py index 98d571f..fec8629 100644 --- a/schema_automator/importers/jsonschema_import_engine.py +++ b/schema_automator/importers/jsonschema_import_engine.py @@ -101,7 +101,7 @@ def import_project(self, import_directory: str, export_directory: str, match_suf if rng in schema.classes: # no need to self-import continue - import_module_name = class_name_to_module_map[rng] + import_module_name = rel + class_name_to_module_map[rng] if import_module_name not in schema.imports: logging.info(f"Adding import to {import_module_name} in {schema.name} for {rng}") schema.imports.append(import_module_name) From 4187417ca284f1c1f86a992d63d86621b99322cc Mon Sep 17 00:00:00 2001 From: Patrick Golden Date: Thu, 15 May 2025 13:02:41 -0400 Subject: [PATCH 85/88] Remove unused direct gspread dependency --- poetry.lock | 2 +- pyproject.toml | 1 - 2 files changed, 1 insertion(+), 2 deletions(-) diff --git a/poetry.lock b/poetry.lock index 07a5628..6c2e57f 100644 --- a/poetry.lock +++ b/poetry.lock @@ -6500,4 +6500,4 @@ postgres = ["psycopg2-binary"] [metadata] lock-version = "2.1" python-versions = "^3.9" -content-hash = "4b28dc47b8f184aa29d583c834cdcec662bdf2aa8c51e60992eee7f572394c0d" +content-hash = "36592b2404117e8f8e38e7c1b6b170def08c65c362e74c4e35bfd190d8a9225b" diff --git a/pyproject.toml b/pyproject.toml index f12d534..9533229 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -59,7 +59,6 @@ numpy = "<2.0" pydbml = "^1.1.2" pyyaml = "^6.0.2" llm = {version = "^0.21", optional = true} -gspread = "^6.2.1" [tool.poetry.group.dev.dependencies] pytest = ">=7.1.1" From 4656afbfab6d5dcf799cff021f2f95c593464fe8 Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Fri, 16 May 2025 13:09:45 -0500 Subject: [PATCH 86/88] Prevent double parsing for dates --- .../generalizers/csv_data_generalizer.py | 26 ++++++++++--------- 1 file changed, 14 insertions(+), 12 deletions(-) diff --git a/schema_automator/generalizers/csv_data_generalizer.py b/schema_automator/generalizers/csv_data_generalizer.py index da623b9..eec1f2a 100644 --- a/schema_automator/generalizers/csv_data_generalizer.py +++ b/schema_automator/generalizers/csv_data_generalizer.py @@ -1,3 +1,4 @@ +import datetime import click import logging import yaml @@ -644,13 +645,12 @@ def infer_range(slot: dict, vals: set, types: dict, coerce=True) -> str: return 'boolean' if all(isfloat(v) for v in nn_vals): return 'float' - if all(is_date(v) for v in nn_vals): - if all( - not hasattr(parse(str(v)), 'hour') or - (parse(str(v)).hour == 0 and parse(str(v)).minute == 0 and parse(str(v)).second == 0) - for v in nn_vals - ): # Check if values are just dates without time - return 'date' + parsed_datetimes = [is_date_or_datetime(v) for v in nn_vals] + if all(pd in ('date', 'datetime') for pd in parsed_datetimes): + # This selects date when values are mixed which may fail validation + # but is the best we can do... we know it isn't string + return 'date' + if all(pd == 'datetime' for pd in parsed_datetimes): return 'datetime' if is_all_measurement(nn_vals): return 'measurement' @@ -681,19 +681,21 @@ def get_db(db_id: str) -> Optional[str]: return parts[0] -def is_date(string, fuzzy=False): +def is_date_or_datetime(string, fuzzy=False): """ - Return whether the string can be interpreted as a date. + Return whether the string can be interpreted as a date or datetime. :param string: str, string to check for date :param fuzzy: bool, ignore unknown tokens in string if True """ try: - parse(string, fuzzy=fuzzy) - return True + dt = parse(string, fuzzy=fuzzy) + if dt.hour == 0 and dt.minute == 0 and dt.second == 0: + return 'date' + return 'datetime' except Exception: # https://stackoverflow.com/questions/4990718/how-can-i-write-a-try-except-block-that-catches-all-exceptions - # we don't know all the different parse exceptions, we assume any error means this is a date + # we don't know all the different parse exceptions, we assume any error means this is not a date return False From 3769ce2a04525a42ce9267cff9293e103f93a14e Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Fri, 16 May 2025 13:16:11 -0500 Subject: [PATCH 87/88] Change mixed datetime default --- schema_automator/generalizers/csv_data_generalizer.py | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) diff --git a/schema_automator/generalizers/csv_data_generalizer.py b/schema_automator/generalizers/csv_data_generalizer.py index eec1f2a..14faeed 100644 --- a/schema_automator/generalizers/csv_data_generalizer.py +++ b/schema_automator/generalizers/csv_data_generalizer.py @@ -646,11 +646,10 @@ def infer_range(slot: dict, vals: set, types: dict, coerce=True) -> str: if all(isfloat(v) for v in nn_vals): return 'float' parsed_datetimes = [is_date_or_datetime(v) for v in nn_vals] - if all(pd in ('date', 'datetime') for pd in parsed_datetimes): - # This selects date when values are mixed which may fail validation - # but is the best we can do... we know it isn't string + if all(pd == 'date' for pd in parsed_datetimes): return 'date' - if all(pd == 'datetime' for pd in parsed_datetimes): + if all(pd in ('date', 'datetime') for pd in parsed_datetimes): + # This selects datetime when values are mixed which may fail validation return 'datetime' if is_all_measurement(nn_vals): return 'measurement' From 7173507a219ba78dc841f34e2d3e7f0eb0c997ff Mon Sep 17 00:00:00 2001 From: amc-corey-cox <69321580+amc-corey-cox@users.noreply.github.com> Date: Fri, 16 May 2025 13:18:23 -0500 Subject: [PATCH 88/88] Add back is_date --- .../generalizers/csv_data_generalizer.py | 16 ++++++++++++++++ 1 file changed, 16 insertions(+) diff --git a/schema_automator/generalizers/csv_data_generalizer.py b/schema_automator/generalizers/csv_data_generalizer.py index 14faeed..c9e0483 100644 --- a/schema_automator/generalizers/csv_data_generalizer.py +++ b/schema_automator/generalizers/csv_data_generalizer.py @@ -680,6 +680,22 @@ def get_db(db_id: str) -> Optional[str]: return parts[0] +def is_date(string, fuzzy=False): + """ + Return whether the string can be interpreted as a date. + + :param string: str, string to check for date + :param fuzzy: bool, ignore unknown tokens in string if True + """ + try: + parse(string, fuzzy=fuzzy) + return True + except Exception: + # https://stackoverflow.com/questions/4990718/how-can-i-write-a-try-except-block-that-catches-all-exceptions + # we don't know all the different parse exceptions, we assume any error means this is a date + return False + + def is_date_or_datetime(string, fuzzy=False): """ Return whether the string can be interpreted as a date or datetime.