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upate build gblock default parameters
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physpetool/phylotree/buildtree.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -43,8 +43,8 @@
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raxmlpara_pro = "-f a -m PROTGAMMAJTTX -p 12345 -x 12345 -# 100 -n T1"
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raxmlpara_dna = "-f a -m GTRGAMMA -p 12345 -x 12345 -# 100 -n T1"
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musclepara = "-maxiters 100"
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gblockspara_pro = "-t=p -e=-gb1"
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gblockspara_dna = "-t=d -e=-gb1"
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gblockspara_pro = '-t=p -b5=h -e=-gb1'
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gblockspara_dna = '-t=d -b5=h -e=-gb1'
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clustalwpara = None
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trimalpara = "-gt 1"
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mafftpara = "--auto"

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