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ORCIDNeil D. Rawlings
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2010 – 2019
- 2019
[j24]Jiangning Song
, Yanan Wang, Fuyi Li, Tatsuya Akutsu, Neil D. Rawlings, Geoffrey I. Webb, Kuo-Chen Chou:
iProt-Sub: a comprehensive package for accurately mapping and predicting protease-specific substrates and cleavage sites. Briefings Bioinform. 20(2): 638-658 (2019)- [j23]Fuyi Li, Yanan Wang, Chen Li, Tatiana T. Marquez-Lago, André Leier, Neil D. Rawlings, Gholamreza Haffari, Jerico Nico De Leon Revote, Tatsuya Akutsu, Kuo-Chen Chou, Anthony W. Purcell, Robert N. Pike, Geoffrey I. Webb, Alexander Ian Smith, Trevor Lithgow, Roger J. Daly, James C. Whisstock, Jiangning Song:
Twenty years of bioinformatics research for protease-specific substrate and cleavage site prediction: a comprehensive revisit and benchmarking of existing methods. Briefings Bioinform. 20(6): 2150-2166 (2019) - [j22]Alex L. Mitchell, Teresa K. Attwood, Patricia C. Babbitt, Matthias Blum, Peer Bork, Alan J. Bridge, Shoshana D. Brown, Hsin-Yu Chang, Sara El-Gebali, Matthew Fraser, Julian Gough, David Haft, Hongzhan Huang, Ivica Letunic, Rodrigo Lopez, Aurelien Luciani, Fábio Madeira, Aron Marchler-Bauer, Huaiyu Mi, Darren A. Natale, Marco Necci, Gift Nuka, Christine A. Orengo, Arun Prasad Pandurangan, Typhaine Paysan-Lafosse, Sebastien Pesseat, Simon C. Potter, Matloob Qureshi, Neil D. Rawlings, Nicole Redaschi, Lorna J. Richardson, Catherine Rivoire, Gustavo A. Salazar, Amaia Sangrador-Vegas, Christian J. A. Sigrist, Ian Sillitoe, Granger G. Sutton, Narmada Thanki, Paul D. Thomas, Silvio C. E. Tosatto, Siew-Yit Yong, Robert D. Finn:
InterPro in 2019: improving coverage, classification and access to protein sequence annotations. Nucleic Acids Res. 47(Database-Issue): D351-D360 (2019) - [j21]Lorna J. Richardson, Neil D. Rawlings, Gustavo A. Salazar, Alexandre Almeida, David Haft, Gregory Ducq, Granger G. Sutton, Robert D. Finn:
Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes. Nucleic Acids Res. 47(Database-Issue): D564-D572 (2019) - 2018
- [j20]Neil D. Rawlings, Alan J. Barrett, Paul D. Thomas, Xiaosong Huang, Alex Bateman, Robert D. Finn:
The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database. Nucleic Acids Res. 46(Database-Issue): D624-D632 (2018) - 2017
- [j19]Robert D. Finn, Teresa K. Attwood, Patricia C. Babbitt, Alex Bateman, Peer Bork, Alan J. Bridge, Hsin-Yu Chang, Zsuzsanna Dosztányi, Sara El-Gebali, Matthew Fraser, Julian Gough, David Haft, Gemma L. Holliday, Hongzhan Huang, Xiaosong Huang, Ivica Letunic, Rodrigo Lopez, Shennan Lu, Aron Marchler-Bauer, Huaiyu Mi, Jaina Mistry, Darren A. Natale, Marco Necci, Gift Nuka, Christine A. Orengo, Young Mi Park, Sebastien Pesseat, Damiano Piovesan, Simon C. Potter, Neil D. Rawlings, Nicole Redaschi, Lorna J. Richardson, Catherine Rivoire, Amaia Sangrador-Vegas, Christian J. A. Sigrist, Ian Sillitoe, Ben Smithers, Silvano Squizzato, Granger G. Sutton, Narmada Thanki, Paul D. Thomas, Silvio C. E. Tosatto, Cathy H. Wu, Ioannis Xenarios, Lai-Su L. Yeh, Siew-Yit Yong, Alex L. Mitchell:
InterPro in 2017 - beyond protein family and domain annotations. Nucleic Acids Res. 45(Database-Issue): D190-D199 (2017) - 2016
- [j18]Neil D. Rawlings, Alan J. Barrett, Robert D. Finn:
Twenty years of the MEROPS database of proteolytic enzymes, their substrates and inhibitors. Nucleic Acids Res. 44(Database-Issue): 343-350 (2016) - 2015
- [j17]Patricia C. Babbitt, Pantelis G. Bagos, Amos Bairoch, Alex Bateman, Arnaud Chatonnet, Mark Jinan Chen, David J. Craik, Robert D. Finn, David E. Gloriam, Daniel H. Haft, Bernard Henrissat, Gemma L. Holliday, Vignir Ísberg, Quentin Kaas, David Landsman, Nicolas Lenfant, Gerard Manning, Nozomi Nagano, Narayanaswamy Srinivasan, Claire O'Donovan, Kim D. Pruitt, Ramanathan Sowdhamini, Neil D. Rawlings, Milton H. Saier Jr., Joanna L. Sharman, Michael Spedding, Konstantinos D. Tsirigos, Åke Västermark, Gerrit Vriend:
Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat. Database J. Biol. Databases Curation 2015 (2015) - 2014
- [j16]Christine B. Trame, Yuanyuan Chang, Herbert L. Axelrod, Ruth Y. Eberhardt, Penelope Coggill, Marco Punta, Neil D. Rawlings:
New mini- zincin structures provide a minimal scaffold for members of this metallopeptidase superfamily. BMC Bioinform. 15: 1 (2014) - [j15]Debanu Das, Alexey G. Murzin, Neil D. Rawlings, Robert D. Finn, Penelope Coggill, Alex Bateman, Adam Godzik, L. Aravind:
Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis. BMC Bioinform. 15: 75 (2014) - [j14]Neil D. Rawlings, Matthew Waller, Alan J. Barrett, Alex Bateman:
MEROPS: the database of proteolytic enzymes, their substrates and inhibitors. Nucleic Acids Res. 42(Database-Issue): 503-509 (2014) - 2013
- [j13]Neil D. Rawlings:
Identification and prioritization of novel uncharacterized peptidases for biochemical characterization. Database J. Biol. Databases Curation 2013 (2013) - [j12]William C. Hwang, Constantina Bakolitsa, Marco Punta, Penelope Coggill, Alex Bateman, Herbert L. Axelrod, Neil D. Rawlings, Mayya Sedova, Scott N. Peterson, Ruth Y. Eberhardt, L. Aravind, Jaime Pascual, Adam Godzik:
LUD, a new protein domain associated with lactate utilization. BMC Bioinform. 14: 341 (2013) - 2012
- [j11]Neil D. Rawlings, Alan J. Barrett, Alex Bateman:
MEROPS: the database of proteolytic enzymes, their substrates and inhibitors. Nucleic Acids Res. 40(Database-Issue): 343-350 (2012) - 2010
- [j10]Neil D. Rawlings, Alan J. Barrett, Alex Bateman:
MEROPS: the peptidase database. Nucleic Acids Res. 38(Database-Issue): 227-233 (2010)
2000 – 2009
- 2009
- [j9]Neil D. Rawlings:
A large and accurate collection of peptidase cleavages in the MEROPS database. Database J. Biol. Databases Curation 2009 (2009) - 2008
- [j8]Neil D. Rawlings, Fraser R. Morton, Chai Yin Kok, Jun Kong, Alan J. Barrett:
MEROPS: the peptidase database. Nucleic Acids Res. 36(Database-Issue): 320-325 (2008) - 2006
- [j7]Neil D. Rawlings, Fraser R. Morton, Alan J. Barrett:
MEROPS: the peptidase database. Nucleic Acids Res. 34(Database-Issue): 270-272 (2006) - 2004
- [j6]Neil D. Rawlings, Dominic P. Tolle, Alan J. Barrett:
MEROPS: the peptidase database. Nucleic Acids Res. 32(Database-Issue): 160-164 (2004) - 2003
- [j5]David J. Studholme, Neil D. Rawlings, Alan J. Barrett, Alex Bateman:
A comparison of Pfam and MEROPS: Two databases, one comprehensive, and one specialised. BMC Bioinform. 4: 17 (2003) - 2002
- [j4]Neil D. Rawlings, Emmet A. O'Brien, Alan J. Barrett:
MEROPS: the protease database. Nucleic Acids Res. 30(1): 343-346 (2002) - 2000
- [j3]Neil D. Rawlings, Alan J. Barrett:
MEROPS: the peptidase database. Nucleic Acids Res. 28(1): 323-325 (2000)
1990 – 1999
- 1999
- [j2]Neil D. Rawlings, Alan J. Barrett:
MEROPS: the peptidase database. Nucleic Acids Res. 27(1): 325-331 (1999) - 1990
- [j1]Neil D. Rawlings, Alan J. Barrett:
FLUSYS: a software package for the collection and analysis of kinetic and scanning data from Perkin-Elmer fluorimeters. Comput. Appl. Biosci. 6(2): 118-119 (1990)
Coauthor Index
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