Samet Erkalp·4d agoSanger’dan Yeni Nesil Dizilemeye: Bir Harfi Nasıl Okuduk?Biyoinformatik Serisi #03 | Sanger, insülin, zincir sonlandırma ve NGS’in kökleri
Gary Bao·Oct 23From Sequencer to Pipeline with Zero Clicks: Automating Illumina FASTQ Downloads from BaseSpaceThe problem: a manual step in an automated lab
J.Suprenant·Sep 27What If Performance-Level Descriptors Were for Learning, Not Just Scoring?Consider two students.
J.Suprenant·Aug 25A FOUR Isn’t Mastery Just Because Your Grade Book Says It IsI’ve been thinking a lot about standards-based grading lately, mostly because the Visible Performance Continuum has forced me to get…
Zongmei Gao·Aug 20RNA-seq: STAR vs. Bowtie2: Which Aligner Should You Use?A practical guide to choosing the right read aligner for RNA-seq, ATAC-seq, ChIP-seq, and short-read DNA sequencing.
J.Suprenant·Aug 19The Question Can Stay Put While the Work ChangesThis past June, a student asked: Why is some of the slate in Granville red?
Zongmei Gao·Aug 9What Is FastQC and How Do You Use It?Once you receive FASTQ files from a sequencing experiment, one of the first things you should do — before alignment, quantification, or…
Zongmei Gao·Aug 6What Is a FASTQ File? A Beginner-Friendly Guide for RNA-seq and NGS AnalysisIf you’ve just started learning bioinformatics, one of the first file formats you’ll encounter is the FASTQ file.
CamilleWard·Jul 8Left Brain, Right Brain, One Middle School MindWhen I tell people I teach middle school, common responses are: “Oof that’s a tough group”, “How?”, “More power to ya!”. Although I did not…
