[ Källkod: flye ]
Paket: flye (2.9.6+dfsg-2 och andra)
Länkar för flye
Debianresurser:
Hämta källkodspaketet flye:
Ansvariga:
Externa resurser:
- Hemsida [github.com]
Liknande paket:
de novo assembler for single molecule sequencing reads using repeat graphs
Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline: it takes raw PacBio / ONT reads as input and outputs polished contigs. Flye also has a special mode for metagenome assembly.
Andra paket besläktade med flye
|
|
|
|
-
- dep: libc6 (>= 2.38) [ej alpha, ia64, loong64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.42) [loong64]
-
- dep: libc6.1 (>= 2.37) [ia64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
- dep: libc6.1 (>= 2.38) [alpha]
-
- dep: libgcc-s1 (>= 3.0) [ej alpha, ia64, riscv64]
- GCC stödbibliotek
- dep: libgcc-s1 (>= 3.4) [alpha, riscv64]
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libstdc++6 (>= 13.1) [ia64]
- GNU standardbibliotek v3 för C++
- dep: libstdc++6 (>= 14) [ej ia64]
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: minimap2
- versatile pairwise aligner for genomic and spliced nucleotide sequences
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-six [ia64]
- Python 2 and 3 compatibility library
-
- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
-
- dep: zlib1g (>= 1:1.1.4)
- Kompressionsbibliotek - körtidspaket
Hämta flye
| Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|---|
| alpha (inofficiell anpassning) | 2.9.6+dfsg-2 | 22.602,3 kbyte | 36.991,0 kbyte | [filförteckning] |
| amd64 | 2.9.6+dfsg-2 | 22.652,5 kbyte | 36.901,0 kbyte | [filförteckning] |
| arm64 | 2.9.6+dfsg-2 | 22.573,7 kbyte | 36.732,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 2.9.3+dfsg2-1 | 22.763,6 kbyte | 38.428,0 kbyte | [filförteckning] |
| loong64 | 2.9.6+dfsg-2 | 22.597,0 kbyte | 36.796,0 kbyte | [filförteckning] |
| ppc64 (inofficiell anpassning) | 2.9.6+dfsg-2 | 22.629,3 kbyte | 37.180,0 kbyte | [filförteckning] |
| ppc64el | 2.9.6+dfsg-2 | 22.642,8 kbyte | 37.116,0 kbyte | [filförteckning] |
| riscv64 | 2.9.6+dfsg-2 | 22.623,4 kbyte | 36.448,0 kbyte | [filförteckning] |
| s390x | 2.9.6+dfsg-2 | 22.663,5 kbyte | 37.008,0 kbyte | [filförteckning] |