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@10XGenomics

10x Genomics

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  1. cellranger cellranger Public

    10x Genomics Single Cell Analysis

    Rust 434 101

  2. loupeR loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    R 141 16

  3. spaceranger spaceranger Public

    Rust 14 2

Repositories

Showing 10 of 74 repositories
  • bamtofastq Public

    Convert 10x BAM files to the original FASTQs compatible with 10x pipelines

    10XGenomics/bamtofastq’s past year of commit activity
    Rust 66 MIT 7 17 4 Updated Oct 13, 2025
  • orbit Public

    Rust wrapper for STAR aligner

    10XGenomics/orbit’s past year of commit activity
    C 18 MIT 4 0 4 Updated Oct 13, 2025
  • spatialdata-io Public Forked from scverse/spatialdata-io
    10XGenomics/spatialdata-io’s past year of commit activity
    Python 3 BSD-3-Clause 47 0 0 Updated Oct 13, 2025
  • analysis_guides Public

    10x Genomics analysis guides files

    10XGenomics/analysis_guides’s past year of commit activity
    Jupyter Notebook 19 14 1 0 Updated Oct 9, 2025
  • intel-mkl-src Public Forked from rust-math/intel-mkl-src

    Redistribute Intel MKL as a crate

    10XGenomics/intel-mkl-src’s past year of commit activity
    Rust 1 25 0 5 Updated Oct 6, 2025
  • FIt-SNE Public Forked from KlugerLab/FIt-SNE

    Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

    10XGenomics/FIt-SNE’s past year of commit activity
    C++ 0 116 0 1 Updated Sep 24, 2025
  • hdf5-rust Public Forked from aldanor/hdf5-rust

    HDF5 for Rust

    10XGenomics/hdf5-rust’s past year of commit activity
    Rust 0 Apache-2.0 100 0 1 Updated Sep 22, 2025
  • rust-shardio Public

    Out-of-memory sorting of large datasets map / reduce style processing

    10XGenomics/rust-shardio’s past year of commit activity
    Rust 46 MIT 4 3 3 Updated Sep 18, 2025
  • rules_conda Public

    Bazel rules for creating conda environments

    10XGenomics/rules_conda’s past year of commit activity
    Go 6 MIT 1 3 4 Updated Sep 8, 2025
  • hover_net Public Forked from vqdang/hover_net

    Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.

    10XGenomics/hover_net’s past year of commit activity
    Python 0 MIT 257 0 5 Updated Aug 22, 2025
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