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Nov 28, 2017
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added subworkflowfeaturerequirement note #40

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3 changes: 3 additions & 0 deletions _extras/recommended-practices.md
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Expand Up @@ -38,10 +38,13 @@ Below are a set of recommended good practices to keep in mind when writing a Com

☐ Give the tool description to a colleague (preferably at a different institution) to test and provide feedback.

☐ CWL implementations which also implement [`SubworkflowFeatureRequirement`][subworkflow] can support nesting workflows as a step within others. Complex workflows with individual components which can be abstracted should utilise this to make their workflow modular and allow sections of them to be easily reused.

[apache-license]: https://www.apache.org/licenses/LICENSE-2.0#apply
[license-example]: https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl/blob/master/workflows/emg-assembly.cwl#L200
[scicrunch-issue]: https://github.com/common-workflow-language/common-workflow-language/issues/scicrunch.org
[edam-example]: http://edamontology.org/format_1915
[iana-types]: http://www.iana.org/assignments/media-types/media-types.xhtml
[file-prop]: http://www.commonwl.org/v1.0/CommandLineTool.html#File
[orcid]: https://orcid.org
[subworkflow]: http://www.commonwl.org/v1.0/Workflow.html#SubworkflowFeatureRequirement