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Parent: Swaped hyphen for underscore in link
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Dec 7, 2017
Merged

Add how to download test_proteins.fasta #47

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7 changes: 7 additions & 0 deletions _episodes/19-custom-types.md
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Expand Up @@ -38,6 +38,13 @@ It is a good example of a number of good practices in CWL.
~~~
{: .source}

___Note:___ To follow the example below, you need to download the example input file, *test_proteins.fasta*. The file is available from [https://github.com/common-workflow-language/user_guide/raw/gh-pages/_includes/cwl/test_proteins.fasta](https://github.com/common-workflow-language/user_guide/raw/gh-pages/_includes/cwl/test_proteins.fasta) and can be downloaded e.g. via `wget`:

~~~
wget https://github.com/common-workflow-language/user_guide/raw/gh-pages/_includes/cwl/test_proteins.fasta
~~~
{: .source}

On line 34, in `inputs:applications`, a list of applications to be used in the
search are imported as a custom object:

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