* Correct lower-case issue state

* Uppercase orderBy and direction as well

* Auto-correct invalid enum parameters

* add suppport for tool aliases for backwards compatibility when tool names change

* cleanup

* log alias usage as warning

* remove comments

* remove mock data

* remove unused code, move deprecated tool aliases to its own file

* remove unused code and add tests

* resolve tool aliases in its own explicit step

* improve logic by returning aliases used in resolvetoolaliases

* remove unused function

* remove comments

* remove comment

* Update pkg/github/deprecated_tool_aliases.go

Co-authored-by: Copilot <[email protected]>

* restore comment

---------

Co-authored-by: Copilot <[email protected]>

When tool parameter descriptions span multiple lines, the continuation
lines now receive proper indentation to maintain markdown list formatting.

This fixes the rendering issue where multi-line descriptions would break
out of the parameter list structure.

Fixes #1494

The go-SDK migration changed MCP protocol handling to require proper
initialization before tool calls. This updates the script to:

- Add initialize request with protocol version and client info
- Add notifications/initialized notification
- Add arguments field to tools/call params
- Keep stdin open with sleep for response
- Gracefully handle missing jq dependency

The licenses script now:
- Generates separate license reports per GOOS/GOARCH combination
- Groups identical reports together (comma-separated arch names)
- Adds a Table of Contents at the top of each platform file
- Handles cases where different architectures have different dependencies
  (e.g., x/sys/unix vs x/sys/windows, mousetrap on Windows only)

This addresses the issue discovered in cli/cli where some deps changed
which changed the mod graph for different GOARCH and affected the
exported licenses because go-licenses tries to find common ancestors.

Address review feedback:
- Remove bash 4.0+ associative array requirement for macOS compatibility
- Add cross-platform hash function (md5sum on Linux, md5 on macOS)
- Ensure deterministic iteration order using sorted groups file
- Add better error handling for failed go-licenses commands
- Fix grammar: 'architecture(s)' -> 'architectures'
- Add documentation for third-party/ being a union of all architectures
- Use file-based state instead of associative arrays for portability

- Check now regenerates using ./script/licenses and compares
- Add GOROOT/PATH setup in CI to fix go-licenses module info errors
- Check both license files AND third-party directory for changes
- See: google/go-licenses#244

The sort command uses locale-specific ordering which can differ between
systems. Use LC_ALL=C to ensure consistent ordering in CI and locally.